ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd22n18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragment bearing RNA polymerase subunit (rpo) genes Length = 21245 Score = 1219 bits (615), Expect = 0.0 Identities = 659/676 (97%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16869 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 16928 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16929 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 16988 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16989 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 17048 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 17049 gtatacacgaaaaaggtatgataggacaagtgcaggaccgattccccataataggttaga 17108 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17109 tcgcgccaatatcaattctttttattccaaggcgaagattgaatcacttagccaacatcc 17168 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 17169 agaagctattggcactttgttgaatcgaaataaagaataccactctttgatgattttgtc 17228 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17229 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 17288 Query: 434 agaatggaatcctagaattcctattctagaaatttttgggcccttaggggctattgtagc 493 |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 17289 agaatggaatcctagaattcctattcgagaaatttttgggcccttaggcgctattgtagc 17348 Query: 494 tagtatatcgcatttttcttcatcttactatttactaacgcataataaaatcctgctnnn 553 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 17349 tagtatatcgcatttttcttcatcttactatttactaacgcataataaaatcctgttaaa 17408 Query: 554 nnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaagaacttaaata 613 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 17409 aaaatatttgttcgttgacaatttaaaacaaaccttccaagtacttcaagaacttaaata 17468 Query: 614 ctctttaatagatgaaaataaaaggatttccaatttcgatagtaacataatgttggatcc 673 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 17469 ctctttaatagatgaaaataaaaggatttctaatttcgatagtaacataatgttggatcc 17528 Query: 674 attccttttgaattgt 689 |||||||||||||||| Sbjct: 17529 attccttttgaattgt 17544
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1219 bits (615), Expect = 0.0 Identities = 659/676 (97%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28223 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 28282 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28283 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 28342 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28343 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 28402 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 28403 gtatacacgaaaaaggtatgataggacaagtgcaggaccgattccccataataggttaga 28462 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28463 tcgcgccaatatcaattctttttattccaaggcgaagattgaatcacttagccaacatcc 28522 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 28523 agaagctattggcactttgttgaatcgaaataaagaataccactctttgatgattttgtc 28582 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28583 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 28642 Query: 434 agaatggaatcctagaattcctattctagaaatttttgggcccttaggggctattgtagc 493 |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 28643 agaatggaatcctagaattcctattcgagaaatttttgggcccttaggcgctattgtagc 28702 Query: 494 tagtatatcgcatttttcttcatcttactatttactaacgcataataaaatcctgctnnn 553 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 28703 tagtatatcgcatttttcttcatcttactatttactaacgcataataaaatcctgttaaa 28762 Query: 554 nnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaagaacttaaata 613 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 28763 aaaatatttgttcgttgacaatttaaaacaaaccttccaagtacttcaagaacttaaata 28822 Query: 614 ctctttaatagatgaaaataaaaggatttccaatttcgatagtaacataatgttggatcc 673 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 28823 ctctttaatagatgaaaataaaaggatttctaatttcgatagtaacataatgttggatcc 28882 Query: 674 attccttttgaattgt 689 |||||||||||||||| Sbjct: 28883 attccttttgaattgt 28898
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 868 bits (438), Expect = 0.0 Identities = 614/675 (90%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 |||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| Sbjct: 91978 tgaaaatagcaagttaactcaaagaatttatcacacgaatagtcaattcgttcgaacttg 92037 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||| Sbjct: 92038 cttagtagtgaattgggaacaagaagaaaaagagggggctcgtgcttctcttgttgaggt 92097 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 |||| |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 92098 aagaacaaacgatctaattcgcgatttcctaagaattgagttagtcaagtctactatttc 92157 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 ||||||||||| |||||||||||||||||||| ||||| || |||| ||||||||||||| Sbjct: 92158 gtatacacgaagaaggtatgataggacaagtgtaggactgattcccaataataggttaga 92217 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| ||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 92218 tcgcaacaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 92277 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 ||||| |||||| || ||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 92278 agaagttattggtaccttgttgaatcgaaataaagaatatccatctttgatgattttgtt 92337 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||| Sbjct: 92338 ggcatccaactgttctcgaattggtttattcaagaattcgaaatatcccaatgcggtaaa 92397 Query: 434 agaatggaatcctagaattcctattctagaaatttttgggcccttaggggctattgtagc 493 ||||| |||||||||||||||||||| ||| |||||||||| |||||| | ||||||| | Sbjct: 92398 agaatcgaatcctagaattcctattcgagatatttttgggctcttaggcgttattgtacc 92457 Query: 494 tagtatatcgcatttttcttcatcttactatttactaacgcataataaaatcctgctnnn 553 |||||||||| ||||||||||||||||||||||| ||||||||||| | ||| || | Sbjct: 92458 tagtatatcgaatttttcttcatcttactatttattaacgcataatcagatcttgttaaa 92517 Query: 554 nnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaagaacttaaata 613 || |||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 92518 aaaatacttgttccttgacaatttgaaacaaaccttccaagtacttcaaggacttaaata 92577 Query: 614 ctctttaatagatgaaaataaaaggatttccaatttcgatagtaacataatgttggatcc 673 |||||||||||| ||||||||||||||||| ||||| || |||||||| |||||||| || Sbjct: 92578 ctctttaatagacgaaaataaaaggatttcgaattttgacagtaacatcatgttggagcc 92637 Query: 674 attccttttgaattg 688 ||||| ||||||||| Sbjct: 92638 attccatttgaattg 92652
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 868 bits (438), Expect = 0.0 Identities = 614/675 (90%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 |||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| Sbjct: 30351 tgaaaatagcaagttaactcaaagaatttatcacacgaatagtcaattcgttcgaacttg 30410 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||| Sbjct: 30411 cttagtagtgaattgggaacaagaagaaaaagagggggctcgtgcttctcttgttgaggt 30470 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 |||| |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 30471 aagaacaaacgatctaattcgcgatttcctaagaattgagttagtcaagtctactatttc 30530 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 ||||||||||| |||||||||||||||||||| ||||| || |||| ||||||||||||| Sbjct: 30531 gtatacacgaagaaggtatgataggacaagtgtaggactgattcccaataataggttaga 30590 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| ||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 30591 tcgcaacaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 30650 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 ||||| |||||| || ||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 30651 agaagttattggtaccttgttgaatcgaaataaagaatatccatctttgatgattttgtt 30710 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||| Sbjct: 30711 ggcatccaactgttctcgaattggtttattcaagaattcgaaatatcccaatgcggtaaa 30770 Query: 434 agaatggaatcctagaattcctattctagaaatttttgggcccttaggggctattgtagc 493 ||||| |||||||||||||||||||| ||| |||||||||| |||||| | ||||||| | Sbjct: 30771 agaatcgaatcctagaattcctattcgagatatttttgggctcttaggcgttattgtacc 30830 Query: 494 tagtatatcgcatttttcttcatcttactatttactaacgcataataaaatcctgctnnn 553 |||||||||| ||||||||||||||||||||||| ||||||||||| | ||| || | Sbjct: 30831 tagtatatcgaatttttcttcatcttactatttattaacgcataatcagatcttgttaaa 30890 Query: 554 nnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaagaacttaaata 613 || |||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 30891 aaaatacttgttccttgacaatttgaaacaaaccttccaagtacttcaaggacttaaata 30950 Query: 614 ctctttaatagatgaaaataaaaggatttccaatttcgatagtaacataatgttggatcc 673 |||||||||||| ||||||||||||||||| ||||| || |||||||| |||||||| || Sbjct: 30951 ctctttaatagacgaaaataaaaggatttcgaattttgacagtaacatcatgttggagcc 31010 Query: 674 attccttttgaattg 688 ||||| ||||||||| Sbjct: 31011 attccatttgaattg 31025
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 844 bits (426), Expect = 0.0 Identities = 611/675 (90%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 |||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| Sbjct: 29877 tgaaaatagcaagttaactcaaagaatttatcacacgaatagtcaattcgttcgaacttg 29936 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| Sbjct: 29937 cttagtagtgaattgggaacaagaagaaaaagagggagctcgtgcttctcttgttgaggt 29996 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 || | |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 29997 aaaaacaaatgatctaattcgcgatttcctaagaattgagttagtcaagtctactatttt 30056 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 ||||||||||| |||||||||||||||||||| |||| || |||| ||||||||||||| Sbjct: 30057 gtatacacgaagaaggtatgataggacaagtgtaggattgattcccaataataggttaga 30116 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| ||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 30117 tcgcaacaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 30176 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 ||||| ||||||||| ||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 30177 agaagttattggcaccttgttgaatcgaaataaagaatatccatctttgatgattttgtt 30236 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||| Sbjct: 30237 ggcatccaactgttctcgaattggtttattcaagaattctaaatatcccaatgcggtaaa 30296 Query: 434 agaatggaatcctagaattcctattctagaaatttttgggcccttaggggctattgtagc 493 ||||| |||||||||||||||||||| ||| |||||||||| |||||| | ||||||| | Sbjct: 30297 agaatcgaatcctagaattcctattcgagatatttttgggctcttaggcgttattgtacc 30356 Query: 494 tagtatatcgcatttttcttcatcttactatttactaacgcataataaaatcctgctnnn 553 |||||||||| ||||||||||||||||||||||| ||||||||||| | ||| || | Sbjct: 30357 tagtatatcgaatttttcttcatcttactatttattaacgcataatcagatcttgttaaa 30416 Query: 554 nnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaagaacttaaata 613 || |||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 30417 aaaatacttgttccttgacaatttgaaacaaaccttacaagtacttcaaggacttaaata 30476 Query: 614 ctctttaatagatgaaaataaaaggatttccaatttcgatagtaacataatgttggatcc 673 |||||||||||| ||||||||||||||||| ||||| || |||||||| |||||||| || Sbjct: 30477 ctctttaatagacgaaaataaaaggatttcgaattttgacagtaacatcatgttggagcc 30536 Query: 674 attccttttgaattg 688 ||||| ||||||||| Sbjct: 30537 attccatttgaattg 30551
>emb|X17318.1|CLZMRPB Zea mays chloroplast trnC gene, rpoB gene, rpoC1 gene, rpoC2 gene and rps2 gene for transfer RNA-Cys, RNA polymerase subunits beta, beta-1, beta-2 and ribosomal protein S2 respectively Length = 12503 Score = 844 bits (426), Expect = 0.0 Identities = 611/675 (90%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 |||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| Sbjct: 9791 tgaaaatagcaagttaactcaaagaatttatcacacgaatagtcaattcgttcgaacttg 9850 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| Sbjct: 9851 cttagtagtgaattgggaacaagaagaaaaagagggagctcgtgcttctcttgttgaggt 9910 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 || | |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9911 aaaaacaaatgatctaattcgcgatttcctaagaattgagttagtcaagtctactatttt 9970 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 ||||||||||| |||||||||||||||||||| |||| || |||| ||||||||||||| Sbjct: 9971 gtatacacgaagaaggtatgataggacaagtgtaggattgattcccaataataggttaga 10030 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| ||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 10031 tcgcaacaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 10090 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 ||||| ||||||||| ||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 10091 agaagttattggcaccttgttgaatcgaaataaagaatatccatctttgatgattttgtt 10150 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||| Sbjct: 10151 ggcatccaactgttctcgaattggtttattcaagaattctaaatatcccaatgcggtaaa 10210 Query: 434 agaatggaatcctagaattcctattctagaaatttttgggcccttaggggctattgtagc 493 ||||| |||||||||||||||||||| ||| |||||||||| |||||| | ||||||| | Sbjct: 10211 agaatcgaatcctagaattcctattcgagatatttttgggctcttaggcgttattgtacc 10270 Query: 494 tagtatatcgcatttttcttcatcttactatttactaacgcataataaaatcctgctnnn 553 |||||||||| ||||||||||||||||||||||| ||||||||||| | ||| || | Sbjct: 10271 tagtatatcgaatttttcttcatcttactatttattaacgcataatcagatcttgttaaa 10330 Query: 554 nnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaagaacttaaata 613 || |||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 10331 aaaatacttgttccttgacaatttgaaacaaaccttacaagtacttcaaggacttaaata 10390 Query: 614 ctctttaatagatgaaaataaaaggatttccaatttcgatagtaacataatgttggatcc 673 |||||||||||| ||||||||||||||||| ||||| || |||||||| |||||||| || Sbjct: 10391 ctctttaatagacgaaaataaaaggatttcgaattttgacagtaacatcatgttggagcc 10450 Query: 674 attccttttgaattg 688 ||||| ||||||||| Sbjct: 10451 attccatttgaattg 10465
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 844 bits (426), Expect = 0.0 Identities = 611/675 (90%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 |||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||| Sbjct: 29876 tgaaaatagcaagttaactcaaagaatttatcacacgaatagtcaattcgttcgaacttg 29935 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| Sbjct: 29936 cttagtagtgaattgggaacaagaagaaaaagagggagctcgtgcttctcttgttgaggt 29995 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 || | |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 29996 aaaaacaaatgatctaattcgcgatttcctaagaattgagttagtcaagtctactatttt 30055 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 ||||||||||| |||||||||||||||||||| |||| || |||| ||||||||||||| Sbjct: 30056 gtatacacgaagaaggtatgataggacaagtgtaggattgattcccaataataggttaga 30115 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| ||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 30116 tcgcaacaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 30175 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 ||||| ||||||||| ||||||||||||||||||||||| | ||||||||||||||||| Sbjct: 30176 agaagttattggcaccttgttgaatcgaaataaagaatatccatctttgatgattttgtt 30235 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||| Sbjct: 30236 ggcatccaactgttctcgaattggtttattcaagaattctaaatatcccaatgcggtaaa 30295 Query: 434 agaatggaatcctagaattcctattctagaaatttttgggcccttaggggctattgtagc 493 ||||| |||||||||||||||||||| ||| |||||||||| |||||| | ||||||| | Sbjct: 30296 agaatcgaatcctagaattcctattcgagatatttttgggctcttaggcgttattgtacc 30355 Query: 494 tagtatatcgcatttttcttcatcttactatttactaacgcataataaaatcctgctnnn 553 |||||||||| ||||||||||||||||||||||| ||||||||||| | ||| || | Sbjct: 30356 tagtatatcgaatttttcttcatcttactatttattaacgcataatcagatcttgttaaa 30415 Query: 554 nnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaagaacttaaata 613 || |||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 30416 aaaatacttgttccttgacaatttgaaacaaaccttacaagtacttcaaggacttaaata 30475 Query: 614 ctctttaatagatgaaaataaaaggatttccaatttcgatagtaacataatgttggatcc 673 |||||||||||| ||||||||||||||||| ||||| || |||||||| |||||||| || Sbjct: 30476 ctctttaatagacgaaaataaaaggatttcgaattttgacagtaacatcatgttggagcc 30535 Query: 674 attccttttgaattg 688 ||||| ||||||||| Sbjct: 30536 attccatttgaattg 30550
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 628 bits (317), Expect = e-177 Identities = 425/461 (92%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| Sbjct: 27498 tgaaaatagcaagttaactcaaagaatttatcatacgaatagtcaattcgttcgaacttg 27557 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 27558 cttagtattgaattgggaacaagaagaaaaagaggaggctcgtgcttcccttgttgagat 27617 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 ||||||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 27618 aagagcaaatggtctgattcgcgatttcctaagaattgggttaatcaaatccactatttc 27677 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 |||||||||||||||||||||||| | ||||| ||||| || || ||||||||||||||| Sbjct: 27678 gtatacacgaaaaaggtatgatagcagaagtgcaggactgattctccataataggttaga 27737 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 27738 tcgcaccaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 27797 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 27798 agaagctattggtaccttgttgaatcgaaataaagaataccaatctttgatggttttgtc 27857 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | |||| Sbjct: 27858 ggcatccaactgttctcgaattggtttttttaagaattcaaaaaatcccaatggggtaaa 27917 Query: 434 agaatggaatcctagaattcctattctagaaatttttgggc 474 ||||| |||||||||||||||||||| | || ||||||||| Sbjct: 27918 agaatcgaatcctagaattcctattccaaaattttttgggc 27958 Score = 194 bits (98), Expect = 3e-46 Identities = 169/195 (86%) Strand = Plus / Plus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaacgcataataaaa 543 |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 27989 ctattgcacctagtatatcgaatttttcttcatcttactatttactaacgtataatcaga 28048 Query: 544 tcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaag 603 ||||| | ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 28049 tcctgttaaaaaagcatttgctccttgacaatttgaaacaaaacttcaaagtacttcaag 28108 Query: 604 aacttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacataa 663 ||||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| | Sbjct: 28109 gacttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacatca 28168 Query: 664 tgttggatccattcc 678 ||||||||||||||| Sbjct: 28169 tgttggatccattcc 28183
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 626 bits (316), Expect = e-176 Identities = 425/460 (92%), Gaps = 1/460 (0%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| Sbjct: 27524 tgaaaatagcaagttaactcaaagaatttatcatacgaatagtcaattcgttcgaacttg 27583 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 27584 cttagtattgaattgggaacaagaagaaaaagaggaggctcgtgcttcccttgttgagat 27643 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 ||||||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 27644 aagagcaaatggtctgattcgcgatttcctaagaattgggttaatcaaatccactatttc 27703 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 |||||||||||||||||||||||| | ||||| ||||| || || ||||||||||||||| Sbjct: 27704 gtatacacgaaaaaggtatgatagcagaagtgcaggactgattctccataataggttaga 27763 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 27764 tcgcaccaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 27823 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 27824 agaagctattggtaccttgttgaatcgaaataaagaataccaatctttgatggttttgtc 27883 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | |||| Sbjct: 27884 ggcatccaactgttctcgaattggtttttttaagaattcaaaaaatcccaatggggtaaa 27943 Query: 434 agaatggaatcctagaattcctattctagaaatttttggg 473 ||||| |||||||||||||||||||| | ||||||||||| Sbjct: 27944 agaatcgaatcctagaattcctattcca-aaatttttggg 27982 Score = 194 bits (98), Expect = 3e-46 Identities = 169/195 (86%) Strand = Plus / Plus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaacgcataataaaa 543 |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 28015 ctattgcacctagtatatcgaatttttcttcatcttactatttactaacgtataatcaga 28074 Query: 544 tcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaag 603 ||||| | ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 28075 tcctgttaaaaaagcatttgctccttgacaatttgaaacaaaacttcaaagtacttcaag 28134 Query: 604 aacttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacataa 663 ||||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| | Sbjct: 28135 gacttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacatca 28194 Query: 664 tgttggatccattcc 678 ||||||||||||||| Sbjct: 28195 tgttggatccattcc 28209
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 626 bits (316), Expect = e-176 Identities = 425/460 (92%), Gaps = 1/460 (0%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| Sbjct: 110937 tgaaaatagcaagttaactcaaagaatttatcatacgaatagtcaattcgttcgaacttg 110996 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 110997 cttagtattgaattgggaacaagaagaaaaagaggaggctcgtgcttcccttgttgagat 111056 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 ||||||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 111057 aagagcaaatggtctgattcgcgatttcctaagaattgggttaatcaaatccactatttc 111116 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 |||||||||||||||||||||||| | ||||| ||||| || || ||||||||||||||| Sbjct: 111117 gtatacacgaaaaaggtatgatagcagaagtgcaggactgattctccataataggttaga 111176 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 111177 tcgcaccaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 111236 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 111237 agaagctattggtaccttgttgaatcgaaataaagaataccaatctttgatggttttgtc 111296 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | |||| Sbjct: 111297 ggcatccaactgttctcgaattggtttttttaagaattcaaaaaatcccaatggggtaaa 111356 Query: 434 agaatggaatcctagaattcctattctagaaatttttggg 473 ||||| |||||||||||||||||||| | ||||||||||| Sbjct: 111357 agaatcgaatcctagaattcctattcca-aaatttttggg 111395 Score = 194 bits (98), Expect = 3e-46 Identities = 169/195 (86%) Strand = Plus / Plus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaacgcataataaaa 543 |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 111428 ctattgcacctagtatatcgaatttttcttcatcttactatttactaacgtataatcaga 111487 Query: 544 tcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaag 603 ||||| | ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 111488 tcctgttaaaaaagcatttgctccttgacaatttgaaacaaaacttcaaagtacttcaag 111547 Query: 604 aacttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacataa 663 ||||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| | Sbjct: 111548 gacttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacatca 111607 Query: 664 tgttggatccattcc 678 ||||||||||||||| Sbjct: 111608 tgttggatccattcc 111622
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 626 bits (316), Expect = e-176 Identities = 425/460 (92%), Gaps = 1/460 (0%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| Sbjct: 9256816 tgaaaatagcaagttaactcaaagaatttatcatacgaatagtcaattcgttcgaacttg 9256875 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 9256876 cttagtattgaattgggaacaagaagaaaaagaggaggctcgtgcttcccttgttgagat 9256935 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 ||||||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 9256936 aagagcaaatggtctgattcgcgatttcctaagaattgggttaatcaaatccactatttc 9256995 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 |||||||||||||||||||||||| | ||||| ||||| || || ||||||||||||||| Sbjct: 9256996 gtatacacgaaaaaggtatgatagcagaagtgcaggactgattctccataataggttaga 9257055 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 9257056 tcgcaccaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 9257115 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9257116 agaagctattggtaccttgttgaatcgaaataaagaataccaatctttgatggttttgtc 9257175 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | |||| Sbjct: 9257176 ggcatccaactgttctcgaattggtttttttaagaattcaaaaaatcccaatggggtaaa 9257235 Query: 434 agaatggaatcctagaattcctattctagaaatttttggg 473 ||||| |||||||||||||||||||| | ||||||||||| Sbjct: 9257236 agaatcgaatcctagaattcctattcca-aaatttttggg 9257274 Score = 626 bits (316), Expect = e-176 Identities = 425/460 (92%), Gaps = 1/460 (0%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| Sbjct: 9152911 tgaaaatagcaagttaactcaaagaatttatcatacgaatagtcaattcgttcgaacttg 9152970 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 9152971 cttagtattgaattgggaacaagaagaaaaagaggaggctcgtgcttcccttgttgagat 9153030 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 ||||||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 9153031 aagagcaaatggtctgattcgcgatttcctaagaattgggttaatcaaatccactatttc 9153090 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 |||||||||||||||||||||||| | ||||| ||||| || || ||||||||||||||| Sbjct: 9153091 gtatacacgaaaaaggtatgatagcagaagtgcaggactgattctccataataggttaga 9153150 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 9153151 tcgcaccaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 9153210 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9153211 agaagctattggtaccttgttgaatcgaaataaagaataccaatctttgatggttttgtc 9153270 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | |||| Sbjct: 9153271 ggcatccaactgttctcgaattggtttttttaagaattcaaaaaatcccaatggggtaaa 9153330 Query: 434 agaatggaatcctagaattcctattctagaaatttttggg 473 ||||| |||||||||||||||||||| | ||||||||||| Sbjct: 9153331 agaatcgaatcctagaattcctattcca-aaatttttggg 9153369 Score = 194 bits (98), Expect = 3e-46 Identities = 169/195 (86%) Strand = Plus / Plus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaacgcataataaaa 543 |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 9257307 ctattgcacctagtatatcgaatttttcttcatcttactatttactaacgtataatcaga 9257366 Query: 544 tcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaag 603 ||||| | ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 9257367 tcctgttaaaaaagcatttgctccttgacaatttgaaacaaaacttcaaagtacttcaag 9257426 Query: 604 aacttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacataa 663 ||||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| | Sbjct: 9257427 gacttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacatca 9257486 Query: 664 tgttggatccattcc 678 ||||||||||||||| Sbjct: 9257487 tgttggatccattcc 9257501 Score = 194 bits (98), Expect = 3e-46 Identities = 169/195 (86%) Strand = Plus / Plus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaacgcataataaaa 543 |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 9153402 ctattgcacctagtatatcgaatttttcttcatcttactatttactaacgtataatcaga 9153461 Query: 544 tcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaag 603 ||||| | ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 9153462 tcctgttaaaaaagcatttgctccttgacaatttgaaacaaaacttcaaagtacttcaag 9153521 Query: 604 aacttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacataa 663 ||||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| | Sbjct: 9153522 gacttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacatca 9153581 Query: 664 tgttggatccattcc 678 ||||||||||||||| Sbjct: 9153582 tgttggatccattcc 9153596
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 626 bits (316), Expect = e-176 Identities = 425/460 (92%), Gaps = 1/460 (0%) Strand = Plus / Minus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| Sbjct: 33550734 tgaaaatagcaagttaactcaaagaatttatcatacgaatagtcaattcgttcgaacttg 33550675 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 33550674 cttagtattgaattgggaacaagaagaaaaagaggaggctcgtgcttcccttgttgagat 33550615 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 ||||||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 33550614 aagagcaaatggtctgattcgcgatttcctaagaattgggttaatcaaatccactatttc 33550555 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 |||||||||||||||||||||||| | ||||| ||||| || || ||||||||||||||| Sbjct: 33550554 gtatacacgaaaaaggtatgatagcagaagtgcaggactgattctccataataggttaga 33550495 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 33550494 tcgcaccaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 33550435 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 33550434 agaagctattggtaccttgttgaatcgaaataaagaataccaatctttgatggttttgtc 33550375 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | |||| Sbjct: 33550374 ggcatccaactgttctcgaattggtttttttaagaattcaaaaaatcccaatggggtaaa 33550315 Query: 434 agaatggaatcctagaattcctattctagaaatttttggg 473 ||||| |||||||||||||||||||| | ||||||||||| Sbjct: 33550314 agaatcgaatcctagaattcctattcca-aaatttttggg 33550276 Score = 194 bits (98), Expect = 3e-46 Identities = 169/195 (86%) Strand = Plus / Minus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaacgcataataaaa 543 |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 33550243 ctattgcacctagtatatcgaatttttcttcatcttactatttactaacgtataatcaga 33550184 Query: 544 tcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaag 603 ||||| | ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 33550183 tcctgttaaaaaagcatttgctccttgacaatttgaaacaaaacttcaaagtacttcaag 33550124 Query: 604 aacttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacataa 663 ||||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| | Sbjct: 33550123 gacttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacatca 33550064 Query: 664 tgttggatccattcc 678 ||||||||||||||| Sbjct: 33550063 tgttggatccattcc 33550049
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 626 bits (316), Expect = e-176 Identities = 425/460 (92%), Gaps = 1/460 (0%) Strand = Plus / Minus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| Sbjct: 95931 tgaaaatagcaagttaactcaaagaatttatcatacgaatagtcaattcgttcgaacttg 95872 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 95871 cttagtattgaattgggaacaagaagaaaaagaggaggctcgtgcttcccttgttgagat 95812 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 ||||||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 95811 aagagcaaatggtctgattcgcgatttcctaagaattgggttaatcaaatccactatttc 95752 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 |||||||||||||||||||||||| | ||||| ||||| || || ||||||||||||||| Sbjct: 95751 gtatacacgaaaaaggtatgatagcagaagtgcaggactgattctccataataggttaga 95692 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 95691 tcgcaccaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 95632 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95631 agaagctattggtaccttgttgaatcgaaataaagaataccaatctttgatggttttgtc 95572 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | |||| Sbjct: 95571 ggcatccaactgttctcgaattggtttttttaagaattcaaaaaatcccaatggggtaaa 95512 Query: 434 agaatggaatcctagaattcctattctagaaatttttggg 473 ||||| |||||||||||||||||||| | ||||||||||| Sbjct: 95511 agaatcgaatcctagaattcctattcca-aaatttttggg 95473 Score = 194 bits (98), Expect = 3e-46 Identities = 169/195 (86%) Strand = Plus / Minus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaacgcataataaaa 543 |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 95440 ctattgcacctagtatatcgaatttttcttcatcttactatttactaacgtataatcaga 95381 Query: 544 tcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaag 603 ||||| | ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 95380 tcctgttaaaaaagcatttgctccttgacaatttgaaacaaaacttcaaagtacttcaag 95321 Query: 604 aacttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacataa 663 ||||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| | Sbjct: 95320 gacttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacatca 95261 Query: 664 tgttggatccattcc 678 ||||||||||||||| Sbjct: 95260 tgttggatccattcc 95246
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 622 bits (314), Expect = e-175 Identities = 413/446 (92%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| Sbjct: 27566 tgaaaatagcaagttaactcaaagaatttatcatacgaatagtcaattcgttcgaacttg 27625 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 27626 cttagtattgaattgggaacaagaagaaaaagaggaggctcgtgcttcccttgttgagat 27685 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 ||||||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 27686 aagagcaaatggtctgattcgcgatttcctaagaattgggttaatcaaatccactatttc 27745 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 |||||||||||||||||||||||| | ||||| ||||| || || ||||||||||||||| Sbjct: 27746 gtatacacgaaaaaggtatgatagcagaagtgcaggactgattctccataataggttaga 27805 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 27806 tcgcaccaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 27865 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 27866 agaagctattggtaccttgttgaatcgaaataaagaataccaatctttgatggttttgtc 27925 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | |||| Sbjct: 27926 ggcatccaactgttctcgaattggtttttttaagaattcaaaaaatcccaatggggtaaa 27985 Query: 434 agaatggaatcctagaattcctattc 459 ||||| |||||||||||||||||||| Sbjct: 27986 agaatcgaatcctagaattcctattc 28011 Score = 194 bits (98), Expect = 3e-46 Identities = 169/195 (86%) Strand = Plus / Plus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaacgcataataaaa 543 |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 28057 ctattgcacctagtatatcgaatttttcttcatcttactatttactaacgtataatcaga 28116 Query: 544 tcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaag 603 ||||| | ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 28117 tcctgttaaaaaagcatttgctccttgacaatttgaaacaaaacttcaaagtacttcaag 28176 Query: 604 aacttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacataa 663 ||||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| | Sbjct: 28177 gacttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacatca 28236 Query: 664 tgttggatccattcc 678 ||||||||||||||| Sbjct: 28237 tgttggatccattcc 28251
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 622 bits (314), Expect = e-175 Identities = 413/446 (92%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| Sbjct: 27566 tgaaaatagcaagttaactcaaagaatttatcatacgaatagtcaattcgttcgaacttg 27625 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 27626 cttagtattgaattgggaacaagaagaaaaagaggaggctcgtgcttcccttgttgagat 27685 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 ||||||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 27686 aagagcaaatggtctgattcgcgatttcctaagaattgggttaatcaaatccactatttc 27745 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 |||||||||||||||||||||||| | ||||| ||||| || || ||||||||||||||| Sbjct: 27746 gtatacacgaaaaaggtatgatagcagaagtgcaggactgattctccataataggttaga 27805 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 27806 tcgcaccaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 27865 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 27866 agaagctattggtaccttgttgaatcgaaataaagaataccaatctttgatggttttgtc 27925 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | |||| Sbjct: 27926 ggcatccaactgttctcgaattggtttttttaagaattcaaaaaatcccaatggggtaaa 27985 Query: 434 agaatggaatcctagaattcctattc 459 ||||| |||||||||||||||||||| Sbjct: 27986 agaatcgaatcctagaattcctattc 28011 Score = 194 bits (98), Expect = 3e-46 Identities = 169/195 (86%) Strand = Plus / Plus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaacgcataataaaa 543 |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 28057 ctattgcacctagtatatcgaatttttcttcatcttactatttactaacgtataatcaga 28116 Query: 544 tcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaag 603 ||||| | ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 28117 tcctgttaaaaaagcatttgctccttgacaatttgaaacaaaacttcaaagtacttcaag 28176 Query: 604 aacttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacataa 663 ||||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| | Sbjct: 28177 gacttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacatca 28236 Query: 664 tgttggatccattcc 678 ||||||||||||||| Sbjct: 28237 tgttggatccattcc 28251
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 622 bits (314), Expect = e-175 Identities = 413/446 (92%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| Sbjct: 27564 tgaaaatagcaagttaactcaaagaatttatcatacgaatagtcaattcgttcgaacttg 27623 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 27624 cttagtattgaattgggaacaagaagaaaaagaggaggctcgtgcttcccttgttgagat 27683 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 ||||||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 27684 aagagcaaatggtctgattcgcgatttcctaagaattgggttaatcaaatccactatttc 27743 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 |||||||||||||||||||||||| | ||||| ||||| || || ||||||||||||||| Sbjct: 27744 gtatacacgaaaaaggtatgatagcagaagtgcaggactgattctccataataggttaga 27803 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 27804 tcgcaccaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 27863 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 27864 agaagctattggtaccttgttgaatcgaaataaagaataccaatctttgatggttttgtc 27923 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | |||| Sbjct: 27924 ggcatccaactgttctcgaattggtttttttaagaattcaaaaaatcccaatggggtaaa 27983 Query: 434 agaatggaatcctagaattcctattc 459 ||||| |||||||||||||||||||| Sbjct: 27984 agaatcgaatcctagaattcctattc 28009 Score = 194 bits (98), Expect = 3e-46 Identities = 169/195 (86%) Strand = Plus / Plus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaacgcataataaaa 543 |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 28055 ctattgcacctagtatatcgaatttttcttcatcttactatttactaacgtataatcaga 28114 Query: 544 tcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaag 603 ||||| | ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 28115 tcctgttaaaaaagcatttgctccttgacaatttgaaacaaaacttcaaagtacttcaag 28174 Query: 604 aacttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacataa 663 ||||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| | Sbjct: 28175 gacttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacatca 28234 Query: 664 tgttggatccattcc 678 ||||||||||||||| Sbjct: 28235 tgttggatccattcc 28249
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 622 bits (314), Expect = e-175 Identities = 413/446 (92%) Strand = Plus / Minus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| Sbjct: 14359447 tgaaaatagcaagttaactcaaagaatttatcatacgaatagtcaattcgttcgaacttg 14359388 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 14359387 cttagtattgaattgggaacaagaagaaaaagaggaggctcgtgcttcccttgttgagat 14359328 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 ||||||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 14359327 aagagcaaatggtctgattcgcgatttcctaagaattgggttaatcaaatccactatttc 14359268 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 |||||||||||||||||||||||| | ||||| ||||| || || ||||||||||||||| Sbjct: 14359267 gtatacacgaaaaaggtatgatagcagaagtgcaggactgattctccataataggttaga 14359208 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 14359207 tcgcaccaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 14359148 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 14359147 agaagctattggtaccttgttgaatcgaaataaagaataccaatctttgatggttttgtc 14359088 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | |||| Sbjct: 14359087 ggcatccaactgttctcgaattggtttttttaagaattcaaaaaatcccaatggggtaaa 14359028 Query: 434 agaatggaatcctagaattcctattc 459 ||||| |||||||||||||||||||| Sbjct: 14359027 agaatcgaatcctagaattcctattc 14359002 Score = 615 bits (310), Expect = e-173 Identities = 412/446 (92%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| Sbjct: 14367905 tgaaaatagcaagttaactcaaagaatttatcatacgaatagtcaattcgttcgaacttg 14367964 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 14367965 cttagtattgaattgggaacaagaagaaaaagaggaggctcgtgcttcccttgttgagat 14368024 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 ||||||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 14368025 aagagcaaatggtctgattcgcgatttcctaagaattgggttaatcaaatccactatttc 14368084 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 ||||||| |||||||||||||||| | ||||| ||||| || || ||||||||||||||| Sbjct: 14368085 gtatacatgaaaaaggtatgatagcagaagtgcaggactgattctccataataggttaga 14368144 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 14368145 tcgcaccaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 14368204 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 14368205 agaagctattggtaccttgttgaatcgaaataaagaataccaatctttgatggttttgtc 14368264 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | |||| Sbjct: 14368265 ggcatccaactgttctcgaattggtttttttaagaattcaaaaaatcccaatggggtaaa 14368324 Query: 434 agaatggaatcctagaattcctattc 459 ||||| |||||||||||||||||||| Sbjct: 14368325 agaatcgaatcctagaattcctattc 14368350 Score = 194 bits (98), Expect = 3e-46 Identities = 169/195 (86%) Strand = Plus / Minus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaacgcataataaaa 543 |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 14358956 ctattgcacctagtatatcgaatttttcttcatcttactatttactaacgtataatcaga 14358897 Query: 544 tcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaag 603 ||||| | ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 14358896 tcctgttaaaaaagcatttgctccttgacaatttgaaacaaaacttcaaagtacttcaag 14358837 Query: 604 aacttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacataa 663 ||||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| | Sbjct: 14358836 gacttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacatca 14358777 Query: 664 tgttggatccattcc 678 ||||||||||||||| Sbjct: 14358776 tgttggatccattcc 14358762 Score = 186 bits (94), Expect = 7e-44 Identities = 168/195 (86%) Strand = Plus / Plus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaacgcataataaaa 543 |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 14368396 ctattgcacctagtatatcgaatttttcttcatcttactatttactaacgtataatcaga 14368455 Query: 544 tcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaag 603 ||| | | ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 14368456 tccggttaaaaaagcatttgctccttgacaatttgaaacaaaacttcaaagtacttcaag 14368515 Query: 604 aacttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacataa 663 ||||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| | Sbjct: 14368516 gacttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacatca 14368575 Query: 664 tgttggatccattcc 678 ||||||||||||||| Sbjct: 14368576 tgttggatccattcc 14368590 Score = 63.9 bits (32), Expect = 7e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaa 531 |||||| | ||||||||||| |||||||||||||||||||||||||| Sbjct: 13401502 ctattgcacctagtatatcgattttttcttcatcttactatttactaa 13401549
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0022A24 Length = 148347 Score = 622 bits (314), Expect = e-175 Identities = 413/446 (92%) Strand = Plus / Minus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| Sbjct: 81369 tgaaaatagcaagttaactcaaagaatttatcatacgaatagtcaattcgttcgaacttg 81310 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 81309 cttagtattgaattgggaacaagaagaaaaagaggaggctcgtgcttcccttgttgagat 81250 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 ||||||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 81249 aagagcaaatggtctgattcgcgatttcctaagaattgggttaatcaaatccactatttc 81190 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 |||||||||||||||||||||||| | ||||| ||||| || || ||||||||||||||| Sbjct: 81189 gtatacacgaaaaaggtatgatagcagaagtgcaggactgattctccataataggttaga 81130 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 81129 tcgcaccaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 81070 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 81069 agaagctattggtaccttgttgaatcgaaataaagaataccaatctttgatggttttgtc 81010 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | |||| Sbjct: 81009 ggcatccaactgttctcgaattggtttttttaagaattcaaaaaatcccaatggggtaaa 80950 Query: 434 agaatggaatcctagaattcctattc 459 ||||| |||||||||||||||||||| Sbjct: 80949 agaatcgaatcctagaattcctattc 80924 Score = 615 bits (310), Expect = e-173 Identities = 412/446 (92%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| Sbjct: 89827 tgaaaatagcaagttaactcaaagaatttatcatacgaatagtcaattcgttcgaacttg 89886 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 89887 cttagtattgaattgggaacaagaagaaaaagaggaggctcgtgcttcccttgttgagat 89946 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 ||||||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 89947 aagagcaaatggtctgattcgcgatttcctaagaattgggttaatcaaatccactatttc 90006 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 ||||||| |||||||||||||||| | ||||| ||||| || || ||||||||||||||| Sbjct: 90007 gtatacatgaaaaaggtatgatagcagaagtgcaggactgattctccataataggttaga 90066 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 90067 tcgcaccaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 90126 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 90127 agaagctattggtaccttgttgaatcgaaataaagaataccaatctttgatggttttgtc 90186 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | |||| Sbjct: 90187 ggcatccaactgttctcgaattggtttttttaagaattcaaaaaatcccaatggggtaaa 90246 Query: 434 agaatggaatcctagaattcctattc 459 ||||| |||||||||||||||||||| Sbjct: 90247 agaatcgaatcctagaattcctattc 90272 Score = 194 bits (98), Expect = 3e-46 Identities = 169/195 (86%) Strand = Plus / Minus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaacgcataataaaa 543 |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 80878 ctattgcacctagtatatcgaatttttcttcatcttactatttactaacgtataatcaga 80819 Query: 544 tcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaag 603 ||||| | ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 80818 tcctgttaaaaaagcatttgctccttgacaatttgaaacaaaacttcaaagtacttcaag 80759 Query: 604 aacttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacataa 663 ||||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| | Sbjct: 80758 gacttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacatca 80699 Query: 664 tgttggatccattcc 678 ||||||||||||||| Sbjct: 80698 tgttggatccattcc 80684 Score = 186 bits (94), Expect = 7e-44 Identities = 168/195 (86%) Strand = Plus / Plus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaacgcataataaaa 543 |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 90318 ctattgcacctagtatatcgaatttttcttcatcttactatttactaacgtataatcaga 90377 Query: 544 tcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaag 603 ||| | | ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 90378 tccggttaaaaaagcatttgctccttgacaatttgaaacaaaacttcaaagtacttcaag 90437 Query: 604 aacttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacataa 663 ||||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| | Sbjct: 90438 gacttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacatca 90497 Query: 664 tgttggatccattcc 678 ||||||||||||||| Sbjct: 90498 tgttggatccattcc 90512
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 611 bits (308), Expect = e-171 Identities = 423/460 (91%), Gaps = 1/460 (0%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| Sbjct: 25780 tgaaaatagcaagttaactcaaagaatttatcatacgaatagtcaattcgttcgaacttg 25839 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 25840 cttagtattgaattgggaacaagaagaaaaagaggaggctcgtgcttcccttgttgagat 25899 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 ||||||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 25900 aagagcaaatggtctgattcgcgatttcctaagaattgggttaatcaaatccactatttc 25959 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 |||||||||||||||||||||||| | ||||| ||||| || || | || |||||||||| Sbjct: 25960 gtatacacgaaaaaggtatgatagcagaagtgcaggactgattctctattataggttaga 26019 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 26020 tcgcaccaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 26079 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 26080 agaagctattggtaccttgttgaatcgaaataaagaataccaatctttgatggttttgtc 26139 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | |||| Sbjct: 26140 ggcatccaactgttctcgaattggtttttttaagaattcaaaaaatcccaatggggtaaa 26199 Query: 434 agaatggaatcctagaattcctattctagaaatttttggg 473 ||||| |||||||||||||||||||| | ||||||||||| Sbjct: 26200 agaatcgaatcctagaattcctattcca-aaatttttggg 26238 Score = 194 bits (98), Expect = 3e-46 Identities = 169/195 (86%) Strand = Plus / Plus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaacgcataataaaa 543 |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 26271 ctattgcacctagtatatcgaatttttcttcatcttactatttactaacgtataatcaga 26330 Query: 544 tcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaag 603 ||||| | ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 26331 tcctgttaaaaaagcatttgctccttgacaatttgaaacaaaacttcaaagtacttcaag 26390 Query: 604 aacttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacataa 663 ||||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| | Sbjct: 26391 gacttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacatca 26450 Query: 664 tgttggatccattcc 678 ||||||||||||||| Sbjct: 26451 tgttggatccattcc 26465
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 611 bits (308), Expect = e-171 Identities = 423/460 (91%), Gaps = 1/460 (0%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| Sbjct: 100713 tgaaaatagcaagttaactcaaagaatttatcatacgaatagtcaattcgttcgaacttg 100772 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 100773 cttagtattgaattgggaacaagaagaaaaagaggaggctcgtgcttcccttgttgagat 100832 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 ||||||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 100833 aagagcaaatggtctgattcgcgatttcctaagaattgggttaatcaaatccactatttc 100892 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 |||||||||||||||||||||||| | ||||| ||||| || || | || |||||||||| Sbjct: 100893 gtatacacgaaaaaggtatgatagcagaagtgcaggactgattctctattataggttaga 100952 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 100953 tcgcaccaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 101012 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 101013 agaagctattggtaccttgttgaatcgaaataaagaataccaatctttgatggttttgtc 101072 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | |||| Sbjct: 101073 ggcatccaactgttctcgaattggtttttttaagaattcaaaaaatcccaatggggtaaa 101132 Query: 434 agaatggaatcctagaattcctattctagaaatttttggg 473 ||||| |||||||||||||||||||| | ||||||||||| Sbjct: 101133 agaatcgaatcctagaattcctattcca-aaatttttggg 101171 Score = 194 bits (98), Expect = 3e-46 Identities = 169/195 (86%) Strand = Plus / Plus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaacgcataataaaa 543 |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 101204 ctattgcacctagtatatcgaatttttcttcatcttactatttactaacgtataatcaga 101263 Query: 544 tcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaag 603 ||||| | ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 101264 tcctgttaaaaaagcatttgctccttgacaatttgaaacaaaacttcaaagtacttcaag 101323 Query: 604 aacttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacataa 663 ||||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| | Sbjct: 101324 gacttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacatca 101383 Query: 664 tgttggatccattcc 678 ||||||||||||||| Sbjct: 101384 tgttggatccattcc 101398
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 611 bits (308), Expect = e-171 Identities = 423/460 (91%), Gaps = 1/460 (0%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| Sbjct: 10319388 tgaaaatagcaagttaactcaaagaatttatcatacgaatagtcaattcgttcgaacttg 10319447 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 10319448 cttagtattgaattgggaacaagaagaaaaagaggaggctcgtgcttcccttgttgagat 10319507 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 ||||||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 10319508 aagagcaaatggtctgattcgcgatttcctaagaattgggttaatcaaatccactatttc 10319567 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 |||||||||||||||||||||||| | ||||| ||||| || || | || |||||||||| Sbjct: 10319568 gtatacacgaaaaaggtatgatagcagaagtgcaggactgattctctattataggttaga 10319627 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 10319628 tcgcaccaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 10319687 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10319688 agaagctattggtaccttgttgaatcgaaataaagaataccaatctttgatggttttgtc 10319747 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | |||| Sbjct: 10319748 ggcatccaactgttctcgaattggtttttttaagaattcaaaaaatcccaatggggtaaa 10319807 Query: 434 agaatggaatcctagaattcctattctagaaatttttggg 473 ||||| |||||||||||||||||||| | ||||||||||| Sbjct: 10319808 agaatcgaatcctagaattcctattcca-aaatttttggg 10319846 Score = 194 bits (98), Expect = 3e-46 Identities = 169/195 (86%) Strand = Plus / Plus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaacgcataataaaa 543 |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 10319879 ctattgcacctagtatatcgaatttttcttcatcttactatttactaacgtataatcaga 10319938 Query: 544 tcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaag 603 ||||| | ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 10319939 tcctgttaaaaaagcatttgctccttgacaatttgaaacaaaacttcaaagtacttcaag 10319998 Query: 604 aacttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacataa 663 ||||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| | Sbjct: 10319999 gacttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacatca 10320058 Query: 664 tgttggatccattcc 678 ||||||||||||||| Sbjct: 10320059 tgttggatccattcc 10320073
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 611 bits (308), Expect = e-171 Identities = 423/460 (91%), Gaps = 1/460 (0%) Strand = Plus / Plus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||| Sbjct: 10325427 tgaaaatagcaagttaactcaaagaatttatcatacgaatagtcaattcgttcgaacttg 10325486 Query: 74 cttagtagtgaattgggaacaagaagaaaaagaaaaggctggtgcttcccttgttgaggt 133 ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| | Sbjct: 10325487 cttagtattgaattgggaacaagaagaaaaagaggaggctcgtgcttcccttgttgagat 10325546 Query: 134 aagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttc 193 ||||||||||| ||| |||||||||||||||||||||| |||| |||| ||||||||||| Sbjct: 10325547 aagagcaaatggtctgattcgcgatttcctaagaattgggttaatcaaatccactatttc 10325606 Query: 194 gtatacacgaaaaaggtatgataggacaagtggaggaccgactccccataataggttaga 253 |||||||||||||||||||||||| | ||||| ||||| || || | || |||||||||| Sbjct: 10325607 gtatacacgaaaaaggtatgatagcagaagtgcaggactgattctctattataggttaga 10325666 Query: 254 tcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaacatca 313 |||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 10325667 tcgcaccaataccaattccttttattccaaggcgaagattcaatcacttagccaacatca 10325726 Query: 314 agaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgattttgtc 373 |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10325727 agaagctattggtaccttgttgaatcgaaataaagaataccaatctttgatggttttgtc 10325786 Query: 374 ggcatccaactgttctcgaattggtttattcaagaattcaaaacatcccaatgcgataaa 433 ||||||||||||||||||||||||||| || |||||||||||| ||||||||| | |||| Sbjct: 10325787 ggcatccaactgttctcgaattggtttttttaagaattcaaaaaatcccaatggggtaaa 10325846 Query: 434 agaatggaatcctagaattcctattctagaaatttttggg 473 ||||| |||||||||||||||||||| | ||||||||||| Sbjct: 10325847 agaatcgaatcctagaattcctattcca-aaatttttggg 10325885 Score = 194 bits (98), Expect = 3e-46 Identities = 169/195 (86%) Strand = Plus / Plus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaacgcataataaaa 543 |||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| | | Sbjct: 10325918 ctattgcacctagtatatcgaatttttcttcatcttactatttactaacgtataatcaga 10325977 Query: 544 tcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagtacttcaag 603 ||||| | ||||| || |||||||||||||||||| |||| |||||||||||| Sbjct: 10325978 tcctgttaaaaaagcatttgctccttgacaatttgaaacaaaacttcaaagtacttcaag 10326037 Query: 604 aacttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacataa 663 ||||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| | Sbjct: 10326038 gacttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacatca 10326097 Query: 664 tgttggatccattcc 678 ||||||||||||||| Sbjct: 10326098 tgttggatccattcc 10326112
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence Length = 183990 Score = 319 bits (161), Expect = 7e-84 Identities = 218/237 (91%) Strand = Plus / Minus Query: 273 ttttattccaaggcgaagattgaatcacttagccaacatcaagaagctattggcactttg 332 |||||||||||||| |||||| |||||||||||||||||||||||| ||||||||| ||| Sbjct: 101817 ttttattccaaggcaaagattcaatcacttagccaacatcaagaagttattggcaccttg 101758 Query: 333 ttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttctcga 392 |||||||||||||| ||||| | ||||||||||||||||| ||||||||||||||||||| Sbjct: 101757 ttgaatcgaaataaggaatatccatctttgatgattttgttggcatccaactgttctcga 101698 Query: 393 attggtttattcaagaattcaaaacatcccaatgcgataaaagaatggaatcctagaatt 452 |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||| Sbjct: 101697 attggtttattcaagaattcaaaatatcccaatgcggtaaaagaatcgaatcctagaatt 101638 Query: 453 cctattctagaaatttttgggcccttaggggctattgtagctagtatatcgcatttt 509 ||||||| ||| |||||||||| |||||| ||||||| ||||||||||| ||||| Sbjct: 101637 cctattcgagatatttttgggctcttaggcattattgtacctagtatatcgaatttt 101581
>gb|DQ069545.1| Typha latifolia RNA polymerase beta'' chain (rpoC2) gene, partial cds; chloroplast Length = 4161 Score = 278 bits (140), Expect = 2e-71 Identities = 421/517 (81%) Strand = Plus / Plus Query: 116 tgcttcccttgttgaggtaagagcaaatgatcttattcgcgatttcctaagaattgagtt 175 ||||||| ||||| | ||||| ||||||||||| |||||||||||| |||||||||| || Sbjct: 2556 tgcttcctttgttcaagtaagggcaaatgatctgattcgcgatttcataagaattgactt 2615 Query: 176 agtcaagtccactatttcgtatacacgaaaaaggtatgataggacaagtggaggaccgac 235 |||||||||||||||||||||||| ||||||||||||||||| ||||| |||| || Sbjct: 2616 agtcaagtccactatttcgtataccggaaaaaggtatgatagggcaagttcaggattgat 2675 Query: 236 tccccataataggttagatcgcgccaatagcaattctttttattccaaggcgaagattga 295 |||| ||||| | ||||||||| |||||| ||| ||||||||||||||| ||||||| | Sbjct: 2676 tcccgataatggattagatcgcaccaatacaaatcctttttattccaaggtgaagattca 2735 Query: 296 atcacttagccaacatcaagaagctattggcactttgttgaatcgaaataaagaatacca 355 ||||||||||||||||| || | || |||| || ||||||||||||| ||| |||| || Sbjct: 2736 atcacttagccaacatcgaggaactgttggtacgttgttgaatcgaactaaggaatgccg 2795 Query: 356 atctttgatgattttgtcggcatccaactgttctcgaattggtttattcaagaattcaaa 415 ||||||| | |||||||| ||||||| ||||||||||||||| |||||| | ||| || Sbjct: 2796 atctttgctaattttgtcatcatccaattgttctcgaattggtccattcaatagttcgaa 2855 Query: 416 acatcccaatgcgataaaagaatggaatcctagaattcctattctagaaatttttgggcc 475 | || ||||| || |||||||| |||| | ||| || ||| | || | || || || Sbjct: 2856 atataacaatgtgacaaaagaatcagatcccataataccaattatggatttattgggtcc 2915 Query: 476 cttaggggctattgtagctagtatatcgcatttttcttcatcttactatttactaacgca 535 |||||| | |||||| ||| |||||| |||||| |||||||||| ||||| |||| || Sbjct: 2916 cttaggaacgattgtacctaaaatatcgaatttttattcatcttaccatttaataactca 2975 Query: 536 taataaaatcctgctnnnnnnntatttgttcgttgacaatttgaaacaaaccttccaagt 595 |||| | ||| || | |||||| | |||||||||| ||| | || || ||||| Sbjct: 2976 taatcagatcttgttaaagaaatatttgctacttgacaatttcaaagagacttttcaagt 3035 Query: 596 acttcaagaacttaaatactctttaatagatgaaaat 632 |||||||| ||||||||| | |||||||||||||||| Sbjct: 3036 acttcaagtacttaaatattttttaatagatgaaaat 3072 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 37 gaatttatcacacaaatagtcaatttgttagaacttgcttagtagtgaattggga 91 ||||||| ||||||| || |||||| ||| | |||||||||||| |||||||||| Sbjct: 2468 gaatttaccacacaagtattcaattagttcggacttgcttagtattgaattggga 2522
>gb|DQ069546.1| Yucca schidigera RNA polymerase beta'' chain (rpoC2) gene, partial cds; chloroplast Length = 4152 Score = 212 bits (107), Expect = 1e-51 Identities = 239/283 (84%) Strand = Plus / Plus Query: 116 tgcttcccttgttgaggtaagagcaaatgatcttattcgcgatttcctaagaattgagtt 175 ||||||| ||||||||||||| ||||||||||| |||||||||||| ||||||||||||| Sbjct: 2562 tgcttcctttgttgaggtaagggcaaatgatctgattcgcgatttcataagaattgagtt 2621 Query: 176 agtcaagtccactatttcgtatacacgaaaaaggtatgataggacaagtggaggaccgac 235 ||||||||| |||||||| ||||| ||||||||||||||| | | || |||| || Sbjct: 2622 agtcaagtctactatttcatatactggaaaaaggtatgatacggcgggttcaggattgat 2681 Query: 236 tccccataataggttagatcgcgccaatagcaattctttttattccaaggcgaagattga 295 |||| ||||| | ||||||||| |||||| |||| ||||||||||||||| ||||||| Sbjct: 2682 tcccgataatggattagatcgcaccaatatcaatcctttttattccaaggggaagattcc 2741 Query: 296 atcacttagccaacatcaagaagctattggcactttgttgaatcgaaataaagaatacca 355 || | ||| ||| ||||||||| || | || || ||||||||||||||||| |||| ||| Sbjct: 2742 attagttacccagcatcaagaaactgtcggtacgttgttgaatcgaaataaggaatgcca 2801 Query: 356 atctttgatgattttgtcggcatccaactgttctcgaattggt 398 ||||||||| |||||||| ||| ||| |||| |||| ||||| Sbjct: 2802 atctttgataattttgtcatcattcaattgttttcgagttggt 2844 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 568 ttgacaatttgaaacaaaccttccaagtacttcaagaacttaaatactctttaatagatg 627 |||||||||| ||||| || |||||||||||| ||| ||||||||||| ||||||||||| Sbjct: 3014 ttgacaattttaaacagactttccaagtacttgaagtacttaaatactgtttaatagatg 3073 Query: 628 aaaataaaaggattt 642 |||||| ||||||| Sbjct: 3074 aaaataggaggattt 3088 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 37 gaatttatcacacaaatagtcaatttgttagaacttgcttagtagtgaattgggaacaag 96 |||||| |||||||| || |||||| ||| | |||||||||||| |||||||||| |||| Sbjct: 2474 gaatttctcacacaagtattcaattagttcggacttgcttagtattgaattgggaccaag 2533 Query: 97 aagaaaa 103 || |||| Sbjct: 2534 aaaaaaa 2540
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 141 bits (71), Expect = 3e-30 Identities = 236/291 (81%) Strand = Plus / Minus Query: 116 tgcttcccttgttgaggtaagagcaaatgatcttattcgcgatttcctaagaattgagtt 175 ||||||| ||||||| ||||| ||||||| || ||||| |||||||||| |||||| || Sbjct: 18677 tgcttcctttgttgaagtaagggcaaatgggctgattcgagatttcctaaaaattgattt 18618 Query: 176 agtcaagtccactatttcgtatacacgaaaaaggtatgataggacaagtggaggaccgac 235 ||| |||||| | |||| ||||| ||||||| |||||| ||||||| |||| | Sbjct: 18617 agtgaagtcccccattttgtatagcggaaaaagaaatgatacgacaagttcaggattcat 18558 Query: 236 tccccataataggttagatcgcgccaatagcaattctttttattccaaggcgaagattga 295 ||| ||||| | | |||||| |||||| |||| ||||||||| |||||||| |||| | Sbjct: 18557 ccccaataatggatcagatcgtaccaatatcaatcctttttatttcaaggcgaggattca 18498 Query: 296 atcacttagccaacatcaagaagctattggcactttgttgaatcgaaataaagaatacca 355 |||||||| ||||||||||| | ||||| | || ||| ||||| ||||||| |||| ||| Sbjct: 18497 atcacttacccaacatcaaggaactattcgtacgttgctgaatagaaataaggaatgcca 18438 Query: 356 atctttgatgattttgtcggcatccaactgttctcgaattggtttattcaa 406 |||||| | |||||||| ||||| | |||||||||||||||| |||||| Sbjct: 18437 atcttttctaattttgtcatcatccgattgttctcgaattggttcattcaa 18387 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 512 ttcatcttactatttactaacgcataat 539 |||||||||||||||| |||| |||||| Sbjct: 18269 ttcatcttactatttaataactcataat 18242 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 568 ttgacaatttgaaacaaaccttccaagtactt 599 |||||||||| ||||| || |||||||||||| Sbjct: 18213 ttgacaatttaaaacagactttccaagtactt 18182
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 577 tgaaacaaaccttccaagtacttcaagaacttaaatactctttaatagatgaaaataaaa 636 ||||||||| |||| |||||||||||| ||||||| ||||||||||| |||||||| ||| Sbjct: 118917 tgaaacaaaacttcaaagtacttcaaggacttaaacactctttaataaatgaaaatcaaa 118976 Query: 637 ggatttccaatttcgatagtaacataatgttggatccattcc 678 ||| ||| ||||||||||||||||| |||||||||||||||| Sbjct: 118977 ggacttcaaatttcgatagtaacatcatgttggatccattcc 119018
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 577 tgaaacaaaccttccaagtacttcaagaacttaaatactctttaatagatgaaaataaaa 636 ||||||||| |||| |||||||||||| ||||||| ||||||||||| |||||||| ||| Sbjct: 12821458 tgaaacaaaacttcaaagtacttcaaggacttaaacactctttaataaatgaaaatcaaa 12821517 Query: 637 ggatttccaatttcgatagtaacataatgttggatccattcc 678 ||| ||| ||||||||||||||||| |||||||||||||||| Sbjct: 12821518 ggacttcaaatttcgatagtaacatcatgttggatccattcc 12821559
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 87.7 bits (44), Expect = 4e-14 Identities = 107/128 (83%) Strand = Plus / Minus Query: 271 ctttttattccaaggcgaagattgaatcacttagccaacatcaagaagctattggcactt 330 ||||| ||||||||||||||||| || | || ||||||||| | | || |||| || | Sbjct: 18560 cttttgattccaaggcgaagattcaaatatttccccaacatcagggaactcttggtacgt 18501 Query: 331 tgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttctc 390 |||||||||||||||| |||| ||||||||| | |||||||| ||||||| ||||||| Sbjct: 18500 tgttgaatcgaaataaggaatgccaatctttcctaattttgtcatcatccaattgttctc 18441 Query: 391 gaattggt 398 |||||||| Sbjct: 18440 gaattggt 18433 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 166 gaattgagttagtcaagtccactatttcgtatacacgaaaaaggtatgata 216 ||||||||||||| ||||||||| |||||||||| |||||||||||||| Sbjct: 18668 gaattgagttagtaaagtccactctttcgtataccgaaaaaaggtatgata 18618 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Minus Query: 14 tgaaaatagcaagttaactcaaagaatttatcacacaaatagtcaatttgttagaacttg 73 ||||||| |||||| || || | |||||| |||||||| || |||||| ||| || |||| Sbjct: 18832 tgaaaatggcaagtcaattcgaggaatttctcacacaagtattcaattagttcgagcttg 18773 Query: 74 cttagtagtgaattgggaacaagaagaaaa 103 ||||||| ||| |||||| |||||| |||| Sbjct: 18772 cttagtattgacttgggaccaagaaaaaaa 18743
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 83.8 bits (42), Expect = 7e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 57 caatttgttagaacttgcttagtagtgaattgggaacaagaagaaaaaga 106 ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 407149 caattcgttcgaacttgcttagtagtgaattgggaacaagaagaaaaaga 407198
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 83.8 bits (42), Expect = 7e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 57 caatttgttagaacttgcttagtagtgaattgggaacaagaagaaaaaga 106 ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 406325 caattcgttcgaacttgcttagtagtgaattgggaacaagaagaaaaaga 406374
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 83.8 bits (42), Expect = 7e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 57 caatttgttagaacttgcttagtagtgaattgggaacaagaagaaaaaga 106 ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 406321 caattcgttcgaacttgcttagtagtgaattgggaacaagaagaaaaaga 406370
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 83.8 bits (42), Expect = 7e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 57 caatttgttagaacttgcttagtagtgaattgggaacaagaagaaaaaga 106 ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 406191 caattcgttcgaacttgcttagtagtgaattgggaacaagaagaaaaaga 406240
>dbj|D13099.1|RICMT03 Oryza sativa (japonica cultivar-group) mitochondrial gene for tRNA-Arg, complete sequence, clone:pMTVSCT4 Length = 1620 Score = 83.8 bits (42), Expect = 7e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 57 caatttgttagaacttgcttagtagtgaattgggaacaagaagaaaaaga 106 ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 160 caattcgttcgaacttgcttagtagtgaattgggaacaagaagaaaaaga 209
>gb|AY757830.1|AY757829S2 Acorus gramineus RpoC2 (rpoC2) gene, partial cds; chloroplast Length = 1809 Score = 81.8 bits (41), Expect = 3e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 115 gtgcttcccttgttgaggtaagagcaaatgatcttattcgcgatttcctaagaattgagt 174 |||||||| ||||||| ||||| ||||| ||||||||| | |||||| |||||||||||| Sbjct: 212 gtgcttcctttgttgaagtaagggcaaacgatcttattagagatttcataagaattgagt 271 Query: 175 tagtcaagtccactatttcgtatac 199 || ||||||| |||||| |||||| Sbjct: 272 tatgcaagtccgctattttgtatac 296 Score = 73.8 bits (37), Expect = 7e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttct 389 ||||||||||||||||| |||| |||||||||||| ||||||| |||| || |||||| Sbjct: 427 ttgttgaatcgaaataaggaatgccaatctttgattcttttgtcatcatctaattgttct 486 Query: 390 cgaattggt 398 ||||||||| Sbjct: 487 cgaattggt 495
>gb|DQ069541.1| Acorus americanus RNA polymerase beta'' chain (rpoC2) gene, partial cds; chloroplast Length = 4158 Score = 81.8 bits (41), Expect = 3e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 115 gtgcttcccttgttgaggtaagagcaaatgatcttattcgcgatttcctaagaattgagt 174 |||||||| ||||||| ||||| ||||| ||||||||| | |||||| |||||||||||| Sbjct: 2564 gtgcttcctttgttgaagtaagggcaaacgatcttattagagatttcataagaattgagt 2623 Query: 175 tagtcaagtccactatttcgtatac 199 || ||||||| |||||| |||||| Sbjct: 2624 tatgcaagtccgctattttgtatac 2648 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttct 389 ||||||||||||||||| |||| |||||||||||| ||||||| |||| || |||| | Sbjct: 2779 ttgttgaatcgaaataaggaatgccaatctttgattcttttgtcatcatctaattgtttt 2838 Query: 390 cgaattggt 398 ||||||||| Sbjct: 2839 cgaattggt 2847 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 37 gaatttatcacacaaatagtcaatttgttagaacttgcttagtagtgaattgggaacaag 96 |||||| |||||||| || |||||| ||| | |||||||||||| |||||||||| |||| Sbjct: 2477 gaatttctcacacaagtattcaattagttcgtacttgcttagtattgaattgggaccaag 2536 Query: 97 aagaaaa 103 || |||| Sbjct: 2537 aacaaaa 2543
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 81.8 bits (41), Expect = 3e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 115 gtgcttcccttgttgaggtaagagcaaatgatcttattcgcgatttcctaagaattgagt 174 |||||||| ||||||| ||||| ||||| ||||||||| | |||||| |||||||||||| Sbjct: 18265 gtgcttcctttgttgaagtaagggcaaacgatcttattagagatttcataagaattgagt 18206 Query: 175 tagtcaagtccactatttcgtatac 199 || ||||||| |||||| |||||| Sbjct: 18205 tatgcaagtccgctattttgtatac 18181 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttct 389 ||||||||||||||||| |||| |||||||||||| ||||||| |||| || |||| | Sbjct: 18050 ttgttgaatcgaaataaggaatgccaatctttgattcttttgtcatcatctaattgtttt 17991 Query: 390 cgaattggt 398 ||||||||| Sbjct: 17990 cgaattggt 17982 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 37 gaatttatcacacaaatagtcaatttgttagaacttgcttagtagtgaattgggaacaag 96 |||||| |||||||| || |||||| ||| | |||||||||||| |||||||||| |||| Sbjct: 18352 gaatttctcacacaagtattcaattagttcgtacttgcttagtattgaattgggaccaag 18293 Query: 97 aagaaaa 103 || |||| Sbjct: 18292 aacaaaa 18286
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Minus Query: 251 agatcgcgccaatagcaattctttttattccaaggcgaagattgaatcacttagccaaca 310 ||||||| ||||| |||| |||||| |||||||||||||| | |||||||||||||||| Sbjct: 21422 agatcgcatcaataccaatccttttttttccaaggcgaagactcaatcacttagccaaca 21363 Query: 311 tcaagaagctattggcactttgttgaatcgaaataa 346 ||||| | ||||| | || ||| ||||| ||||||| Sbjct: 21362 tcaaggaactattcgtacattgctgaatagaaataa 21327 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Minus Query: 37 gaatttatcacacaaatagtcaatttgttagaacttgcttagtagtgaattgggaacaag 96 |||||| |||||||| | |||||| ||| | |||||||||||| |||||||||| |||| Sbjct: 21651 gaatttttcacacaagcattcaattagttcggacttgcttagtattgaattgggatcaag 21592 Query: 97 a 97 | Sbjct: 21591 a 21591
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Plus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttct 389 ||||||||||||||||| |||| ||||||||||| |||||||| ||||||| |||||| Sbjct: 21976 ttgttgaatcgaaataaggaatctcaatctttgataattttgtcatcatccaattgttct 22035 Query: 390 cgaattggtttattcaagaattcaaaacatcccaatgcgataaaaga 436 ||||| || |||||| || |||| ||||||||| ||||||||| Sbjct: 22036 cgaataggcccattcaacgatgtaaaatatcccaatgtgataaaaga 22082
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 57 caatttgttagaacttgcttagtagtgaattgggaacaagaagaaaaaga 106 ||||| ||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 4638903 caattcgttcgaacttgcttagtagtgagttgggaacaagaagaaaaaga 4638854
>dbj|AP006176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0681H07 Length = 144722 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 57 caatttgttagaacttgcttagtagtgaattgggaacaagaagaaaaaga 106 ||||| ||| |||||||||||||||||| ||||||||||||||||||||| Sbjct: 91772 caattcgttcgaacttgcttagtagtgagttgggaacaagaagaaaaaga 91723
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 73.8 bits (37), Expect = 7e-10 Identities = 91/109 (83%) Strand = Plus / Minus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttct 389 ||||||||| ||||||| |||| |||||||||||| |||||||| ||||||| |||| | Sbjct: 19230 ttgttgaatagaaataaggaatgccaatctttgataattttgtcatcatccaattgtttt 19171 Query: 390 cgaattggtttattcaagaattcaaaacatcccaatgcgataaaagaat 438 ||||| ||| |||||| || |||| ||| ||||| ||||||||||| Sbjct: 19170 cgaatgggtccattcaacgatgtaaaatatcacaatgtgataaaagaat 19122
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Minus Query: 340 gaaataaagaataccaatctttgatgattttgtcggcatccaactgttctcgaattggtt 399 ||||||| |||| |||||||||||| |||||||| ||||||| ||||||||||| ||| Sbjct: 19532 gaaataaggaatgccaatctttgataattttgtcatcatccaattgttctcgaatgggtc 19473 Query: 400 tattcaagaattcaaaacatcccaatgcgataaaagaat 438 |||||| || |||| ||| ||||| ||||||||||| Sbjct: 19472 cattcaacgatgtaaaatatcacaatgtgataaaagaat 19434
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 607 ttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacat 661 ||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| Sbjct: 15531993 ttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacat 15532047 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 aaaaaggtatgataggacaa 222 |||||||||||||||||||| Sbjct: 24630196 aaaaaggtatgataggacaa 24630177
>dbj|AP005737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062P14 Length = 168223 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 607 ttaaatactctttaatagatgaaaataaaaggatttccaatttcgatagtaacat 661 ||||| ||||||||||| |||||||| |||||| ||| ||||||||||||||||| Sbjct: 50476 ttaaacactctttaataaatgaaaatcaaaggacttcaaatttcgatagtaacat 50530
>gb|DQ069544.1| Ranunculus macranthus RNA polymerase beta'' chain (rpoC2) gene, partial cds; chloroplast Length = 4128 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 36 agaatttatcacacaaatagtcaatttgttagaacttgcttagtagtgaattgggaacaa 95 ||||||| ||||||||||| |||||| ||| ||||||| |||||| |||||||||| ||| Sbjct: 2473 agaatttctcacacaaatattcaattagttcgaacttgtttagtattgaattgggaccaa 2532 Query: 96 ga 97 || Sbjct: 2533 ga 2534 Score = 44.1 bits (22), Expect = 0.60 Identities = 70/86 (81%) Strand = Plus / Plus Query: 309 catcaagaagctattggcactttgttgaatcgaaataaagaataccaatctttgatgatt 368 ||||||| | ||||| | || ||||||||| |||||| |||| |||||| ||||| | | Sbjct: 2761 catcaaggaactattcgtacgttgttgaataaaaataaggaatgccaatccttgataact 2820 Query: 369 ttgtcggcatccaactgttctcgaat 394 ||||| |||| || ||||||||||| Sbjct: 2821 ttgtcatcatctaattgttctcgaat 2846 Score = 42.1 bits (21), Expect = 2.4 Identities = 57/69 (82%) Strand = Plus / Plus Query: 140 aaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatttcgtatac 199 ||||| ||| ||||| |||||| ||| ||| || ||||| |||| | ||||||||||||| Sbjct: 2589 aaatgctctgattcgagatttcataaaaatggacttagtgaagtaccctatttcgtatac 2648 Query: 200 acgaaaaag 208 ||||||| Sbjct: 2649 cagaaaaag 2657 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 605 acttaaatactctttaatagatgaaaat 632 ||||||||| | |||||||||||||||| Sbjct: 3057 acttaaatattatttaatagatgaaaat 3084
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttct 389 ||||||||||||||||| |||| ||||||||||| |||||||| ||||||| |||| | Sbjct: 21916 ttgttgaatcgaaataaggaatctcaatctttgataattttgtcatcatccaattgtttt 21975 Query: 390 cgaat 394 ||||| Sbjct: 21976 cgaat 21980
>gb|AY865171.1| Lactuca sativa chloroplast inversion region Length = 28722 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttct 389 ||||||||||||||||| |||| ||||||||||| |||||||| ||||||| |||| | Sbjct: 15856 ttgttgaatcgaaataaggaatctcaatctttgataattttgtcatcatccaattgtttt 15915 Query: 390 cgaat 394 ||||| Sbjct: 15916 cgaat 15920
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttct 389 ||||||||||||||||| |||| ||||||||||| |||||||| ||||||| |||| | Sbjct: 21916 ttgttgaatcgaaataaggaatctcaatctttgataattttgtcatcatccaattgtttt 21975 Query: 390 cgaat 394 ||||| Sbjct: 21976 cgaat 21980
>dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1521_G01 Length = 144102 Score = 63.9 bits (32), Expect = 7e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 484 ctattgtagctagtatatcgcatttttcttcatcttactatttactaa 531 |||||| | ||||||||||| |||||||||||||||||||||||||| Sbjct: 126753 ctattgcacctagtatatcgattttttcttcatcttactatttactaa 126800
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 118 cttcccttgttgaggtaagagcaaatgatcttattcgcgatttcctaagaattgagttag 177 ||||| ||||||| ||||| |||||| ||| ||||| ||||||||||||||||| |||| Sbjct: 19595 cttcctttgttgaagtaagtacaaatggtctgattcgagatttcctaagaattgacttag 19536 Query: 178 tcaagtccactatttcgtat 197 | || | | ||||||||||| Sbjct: 19535 tgaaattccctatttcgtat 19516
>gb|DQ069543.1| Nuphar advena RNA polymerase beta'' chain (rpoC2) gene, partial cds; chloroplast Length = 4170 Score = 61.9 bits (31), Expect = 3e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 132 gtaagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatt 191 ||||||||||||||||| ||||| ||||| |||||||||| || || ||||| ||||| Sbjct: 2599 gtaagagcaaatgatctgattcgatatttcataagaattgatttggtgaagtctcctatt 2658 Query: 192 tcgtatacacgaaaaaggtatgatagg 218 | |||||| |||| ||| |||||||| Sbjct: 2659 ttgtatactggaaagaggaatgatagg 2685
>gb|AY521596.1| Cucumis sativus isolate GY-14, chloroplast sequence Length = 16653 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatc 379 ||||||||| ||||||||||| |||||||||||| |||||||| ||||| Sbjct: 8158 ttgttgaatagaaataaagaacgccaatctttgataattttgtcagcatc 8109
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatc 379 ||||||||| ||||||||||| |||||||||||| |||||||| ||||| Sbjct: 18759 ttgttgaatagaaataaagaacgccaatctttgataattttgtcagcatc 18710
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatc 379 ||||||||| ||||||||||| |||||||||||| |||||||| ||||| Sbjct: 18748 ttgttgaatagaaataaagaacgccaatctttgataattttgtcagcatc 18699
>emb|X03912.1|CHPSATPA Pea chloroplast DNA (4.7 kb) 5' to ATP-synthase a subunit gene Length = 4680 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 295 aatcacttagccaacatcaagaagctattggcactttgttgaatcgaaataaagaatacc 354 |||||||||||||| |||| | | ||||| | | ||||||||| |||||||||||| || Sbjct: 2130 aatcacttagccaaaatcacggaactattcgtatgttgttgaatagaaataaagaatgcc 2189 Query: 355 aatctttgatgattttgtc 373 ||||| ||| |||||||| Sbjct: 2190 gatcttggataattttgtc 2208
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 54.0 bits (27), Expect = 6e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 132 gtaagagcaaatgatcttattcgcgatttcctaagaattgagttagtcaagtccactatt 191 ||||| ||||||||||| ||||| ||||| |||||||||| || || ||||| ||||| Sbjct: 20097 gtaagggcaaatgatctgattcgatatttcataagaattgatttggtgaagtctcctatt 20038 Query: 192 tcgtatacacgaaaaaggtatgatagg 218 | |||||| |||| ||| |||||||| Sbjct: 20037 ttgtataccggaaagaggaatgatagg 20011
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttct 389 ||||||||| ||||||| |||| || || ||||| |||||||| ||| |||| |||||| Sbjct: 18282 ttgttgaatagaaataaggaatgtcagtcgttgataattttgtcagcagccaattgttct 18223 Query: 390 cgaat 394 ||||| Sbjct: 18222 cgaat 18218
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttct 389 ||||||||| ||||||| |||| || || ||||| |||||||| ||| |||| |||||| Sbjct: 18140 ttgttgaatagaaataaggaatgtcagtcgttgataattttgtcagcagccaattgttct 18081 Query: 390 cgaat 394 ||||| Sbjct: 18080 cgaat 18076
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttct 389 ||||||||| ||||||| |||| || || ||||| |||||||| ||| |||| |||||| Sbjct: 18137 ttgttgaatagaaataaggaatgtcagtcgttgataattttgtcagcagccaattgttct 18078 Query: 390 cgaat 394 ||||| Sbjct: 18077 cgaat 18073
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttct 389 ||||||||| ||||||| |||| || || ||||| |||||||| ||| |||| |||||| Sbjct: 18170 ttgttgaatagaaataaggaatgtcagtcgttgataattttgtcagcagccaattgttct 18111 Query: 390 cgaat 394 ||||| Sbjct: 18110 cgaat 18106
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttct 389 ||||||||| ||||||| |||| || || ||||| |||||||| ||| |||| |||||| Sbjct: 18282 ttgttgaatagaaataaggaatgtcagtcgttgataattttgtcagcagccaattgttct 18223 Query: 390 cgaat 394 ||||| Sbjct: 18222 cgaat 18218
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 48.1 bits (24), Expect = 0.039 Identities = 54/64 (84%) Strand = Plus / Minus Query: 115 gtgcttcccttgttgaggtaagagcaaatgatcttattcgcgatttcctaagaattgagt 174 ||||||| ||||||| ||||| |||||| ||| ||||| |||||||||||||| || | Sbjct: 18915 gtgcttcttttgttgaagtaaggacaaatggtctgattcgagatttcctaagaatcgact 18856 Query: 175 tagt 178 |||| Sbjct: 18855 tagt 18852 Score = 48.1 bits (24), Expect = 0.039 Identities = 36/40 (90%) Strand = Plus / Minus Query: 340 gaaataaagaataccaatctttgatgattttgtcggcatc 379 ||||||| |||| |||||||||||| |||||||| ||||| Sbjct: 18678 gaaataaggaatcccaatctttgataattttgtcagcatc 18639
>gb|AC148997.1| Mus musculus BAC clone RP23-338B6 from chromosome 7, complete sequence Length = 232770 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 90 gaacaagaagaaaaagaaaaggc 112 ||||||||||||||||||||||| Sbjct: 78713 gaacaagaagaaaaagaaaaggc 78735
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 46.1 bits (23), Expect = 0.15 Identities = 65/79 (82%) Strand = Plus / Minus Query: 295 aatcacttagccaacatcaagaagctattggcactttgttgaatcgaaataaagaatacc 354 |||||||||||||| |||| | | ||||| | | ||||||||| ||||||| |||| || Sbjct: 80715 aatcacttagccaaaatcacggaactattcgtatgttgttgaatagaaataaggaatgcc 80656 Query: 355 aatctttgatgattttgtc 373 ||||| ||| |||||||| Sbjct: 80655 gatcttggataattttgtc 80637
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 67 gaacttgcttagtagtgaattgggaa 92 |||||| ||||||||||||||||||| Sbjct: 99282 gaacttacttagtagtgaattgggaa 99257
>gb|AC145877.3| Pan troglodytes BAC clone RP43-20I7 from 7, complete sequence Length = 192794 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 92 acaagaagaaaaagaaaaggctggtg 117 |||||||||||||||||| ||||||| Sbjct: 150640 acaagaagaaaaagaaaaagctggtg 150615
>emb|CR956383.8| Pig DNA sequence from clone CH242-271L5 on chromosome 17, complete sequence Length = 163007 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 28 taactcaaagaatttatcacac 49 |||||||||||||||||||||| Sbjct: 26592 taactcaaagaatttatcacac 26571
>ref|XM_646614.1| Entamoeba histolytica HM-1:IMSS Rap/Ran GTPase activating protein (151.t00010) partial mRNA Length = 1689 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 caagaagaaaaagaaaaggctg 114 |||||||||||||||||||||| Sbjct: 127 caagaagaaaaagaaaaggctg 148
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 44.1 bits (22), Expect = 0.60 Identities = 43/50 (86%) Strand = Plus / Plus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatc 379 ||||| |||| |||||| |||| || ||||||||||||||||| ||||| Sbjct: 48322 ttgttaaatcaaaataaggaatgcccgtctttgatgattttgtccgcatc 48371
>gb|AC183387.3| Pan troglodytes BAC clone CH251-113M12 from chromosome unknown, complete sequence Length = 175955 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 168 attgagttagtcaagtccactatttc 193 |||||||||||||||||| ||||||| Sbjct: 137720 attgagttagtcaagtcctctatttc 137695
>gb|DP000055.1| Pan troglodytes chromosome Y chry_random_1 genomic scaffold Length = 276070 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 168 attgagttagtcaagtccactatttc 193 |||||||||||||||||| ||||||| Sbjct: 206521 attgagttagtcaagtcctctatttc 206546
>gb|DP000056.1| Pan troglodytes chromosome Y chry_random_3 genomic scaffold Length = 331329 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 168 attgagttagtcaagtccactatttc 193 |||||||||||||||||| ||||||| Sbjct: 268200 attgagttagtcaagtcctctatttc 268225
>gb|AC009196.14| Homo sapiens chromosome 7 clone RP11-49B7, complete sequence Length = 170763 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 acaagaagaaaaagaaaaggctggtg 117 |||||||||||||||||| ||||||| Sbjct: 20233 acaagaagaaaaagaaaaagctggtg 20258
>gb|AC172372.2| Pan troglodytes BAC clone CH251-1067L6 from chromosome y, complete sequence Length = 192570 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 168 attgagttagtcaagtccactatttc 193 |||||||||||||||||| ||||||| Sbjct: 151171 attgagttagtcaagtcctctatttc 151146
>gb|AC011841.7| Homo sapiens chromosome 17, clone RP11-272E10, complete sequence Length = 174588 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 168 attgagttagtcaagtccactatttc 193 |||||||||||||||||| ||||||| Sbjct: 80320 attgagttagtcaagtcctctatttc 80295
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 gaacttgcttagtagtgaattgggaa 92 |||||| ||||||||||||||||||| Sbjct: 11795603 gaacttacttagtagtgaattgggaa 11795628 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 aacaagaagaaaaagaaaagg 111 ||||||||||||||||||||| Sbjct: 4173479 aacaagaagaaaaagaaaagg 4173459
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Plus Query: 624 gatgaaaataaaaggatttccaatttcgatagtaacat 661 ||||||||||| || ||||| |||||| |||||||||| Sbjct: 5414816 gatgaaaataatagcatttcaaatttccatagtaacat 5414853
>gb|AC175060.2| Pan troglodytes BAC clone CH251-724O9 from chromosome y, complete sequence Length = 196548 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 168 attgagttagtcaagtccactatttc 193 |||||||||||||||||| ||||||| Sbjct: 125321 attgagttagtcaagtcctctatttc 125346
>gb|AC078844.2|AC078844 Homo sapiens chromosome 7 clone RP11-786M13, complete sequence Length = 186927 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 92 acaagaagaaaaagaaaaggctggtg 117 |||||||||||||||||| ||||||| Sbjct: 101841 acaagaagaaaaagaaaaagctggtg 101866
>gb|AC172373.3| Pan troglodytes BAC clone CH251-1081D19 from chromosome y, complete sequence Length = 194913 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 168 attgagttagtcaagtccactatttc 193 |||||||||||||||||| ||||||| Sbjct: 95161 attgagttagtcaagtcctctatttc 95136
>gb|AC163726.3| Pan troglodytes BAC clone CH251-653B19 from chromosome y, complete sequence Length = 207364 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 168 attgagttagtcaagtccactatttc 193 |||||||||||||||||| ||||||| Sbjct: 144237 attgagttagtcaagtcctctatttc 144262
>dbj|AP004754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529B09 Length = 138188 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Plus Query: 624 gatgaaaataaaaggatttccaatttcgatagtaacat 661 ||||||||||| || ||||| |||||| |||||||||| Sbjct: 45750 gatgaaaataatagcatttcaaatttccatagtaacat 45787
>gb|AC163728.4| Pan troglodytes BAC clone CH251-589C1 from chromosome y, complete sequence Length = 206451 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 168 attgagttagtcaagtccactatttc 193 |||||||||||||||||| ||||||| Sbjct: 140241 attgagttagtcaagtcctctatttc 140266
>gb|AC163716.3| Pan troglodytes BAC clone CH251-828J24 from chromosome y, complete sequence Length = 165274 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 168 attgagttagtcaagtccactatttc 193 |||||||||||||||||| ||||||| Sbjct: 26360 attgagttagtcaagtcctctatttc 26335
>gb|AC175059.2| Pan troglodytes BAC clone CH251-777D16 from chromosome y, complete sequence Length = 166448 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 168 attgagttagtcaagtccactatttc 193 |||||||||||||||||| ||||||| Sbjct: 98207 attgagttagtcaagtcctctatttc 98182
>dbj|AP001000.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-676M6, complete sequence Length = 204955 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 393 attggtttattcaagaattcaa 414 |||||||||||||||||||||| Sbjct: 80170 attggtttattcaagaattcaa 80149
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 67 gaacttgcttagtagtgaattgggaa 92 |||||| ||||||||||||||||||| Sbjct: 11874014 gaacttacttagtagtgaattgggaa 11874039 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 aacaagaagaaaaagaaaagg 111 ||||||||||||||||||||| Sbjct: 4182173 aacaagaagaaaaagaaaagg 4182153
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 44.1 bits (22), Expect = 0.60 Identities = 31/34 (91%) Strand = Plus / Plus Query: 129 gaggtaagagcaaatgatcttattcgcgatttcc 162 ||||||||||| ||||||||| |||| ||||||| Sbjct: 68014 gaggtaagagcgaatgatctttttcgtgatttcc 68047 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 aaggtatgataggacaagtg 225 |||||||||||||||||||| Sbjct: 331160 aaggtatgataggacaagtg 331179
>ref|XM_480125.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2315 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 ggaacaagaagaaaaagaaaa 109 ||||||||||||||||||||| Sbjct: 939 ggaacaagaagaaaaagaaaa 959
>gb|AC146328.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0018J01, complete sequence Length = 82510 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 aacaagaagaaaaagaaaagg 111 ||||||||||||||||||||| Sbjct: 47331 aacaagaagaaaaagaaaagg 47351
>gb|AC184800.2| Pan troglodytes chromosome X clone PTB-18K16 map human ortholog p11.23, complete sequence Length = 142154 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 aacaagaagaaaaagaaaagg 111 ||||||||||||||||||||| Sbjct: 104452 aacaagaagaaaaagaaaagg 104432
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 aaagaatttatcacacaaatagtca 58 |||||||||||||||| |||||||| Sbjct: 3516188 aaagaatttatcacacgaatagtca 3516164
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 42.1 bits (21), Expect = 2.4 Identities = 54/65 (83%) Strand = Plus / Minus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttct 389 ||||| ||| ||||||| |||| || || ||||| |||||||| ||| |||| |||||| Sbjct: 18549 ttgttaaatagaaataaggaatgtcagtcgttgataattttgtcagcagccaattgttct 18490 Query: 390 cgaat 394 ||||| Sbjct: 18489 cgaat 18485
>emb|CR954189.2| Medicago truncatula chromosome 5 clone mte1-73d17, COMPLETE SEQUENCE Length = 110556 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 aacaagaagaaaaagaaaagg 111 ||||||||||||||||||||| Sbjct: 16976 aacaagaagaaaaagaaaagg 16996
>gb|AC127344.3| Mus musculus BAC clone RP23-212H18 from chromosome 7, complete sequence Length = 182487 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 gggaacaagaagaaaaagaaaaggc 112 |||||||| |||||||||||||||| Sbjct: 101713 gggaacaaaaagaaaaagaaaaggc 101689
>gb|AC151915.8| Medicago truncatula clone mth2-30n12, complete sequence Length = 92346 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 525 ttactaacgcataataaaatc 545 ||||||||||||||||||||| Sbjct: 63402 ttactaacgcataataaaatc 63422
>gb|AC146587.20| Medicago truncatula clone mth2-144j8, complete sequence Length = 113373 Score = 42.1 bits (21), Expect = 2.4 Identities = 48/57 (84%) Strand = Plus / Plus Query: 295 aatcacttagccaacatcaagaagctattggcactttgttgaatcgaaataaagaat 351 |||||||||||||| |||| ||| ||||| | | ||||||||| ||||||| |||| Sbjct: 22798 aatcacttagccaaaatcacgaaactattcgtatgttgttgaatagaaataaggaat 22854
>gb|AC151743.27| Medicago truncatula clone mth2-25e15, complete sequence Length = 105045 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 525 ttactaacgcataataaaatc 545 ||||||||||||||||||||| Sbjct: 10776 ttactaacgcataataaaatc 10756
>gb|AC111083.13| Mus musculus chromosome 3, clone RP23-142D9, complete sequence Length = 206194 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 135 agagcaaatgatcttattcgc 155 ||||||||||||||||||||| Sbjct: 8239 agagcaaatgatcttattcgc 8259
>emb|AL159159.21| Human DNA sequence from clone RP11-88J11 on chromosome 13 Contains the 3' end of the CDK8 gene for cyclin-dependent kinase 8, complete sequence Length = 144626 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 623 agatgaaaataaaaggatttc 643 ||||||||||||||||||||| Sbjct: 22376 agatgaaaataaaaggatttc 22356
>gb|AC103987.5| Homo sapiens chromosome 18, clone RP11-268I9, complete sequence Length = 163972 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 aagaattcaaaacatcccaat 425 ||||||||||||||||||||| Sbjct: 49943 aagaattcaaaacatcccaat 49923
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 42.1 bits (21), Expect = 2.4 Identities = 54/65 (83%) Strand = Plus / Minus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttct 389 ||||||||| ||||||| |||| || || ||||| |||||||| || |||| |||||| Sbjct: 18311 ttgttgaatagaaataaggaatgtcagtcgttgataattttgtcatcagccaattgttct 18252 Query: 390 cgaat 394 ||||| Sbjct: 18251 cgaat 18247
>gb|AC116916.2| Homo sapiens chromosome 18, clone CTD-3070B10, complete sequence Length = 54636 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 aagaattcaaaacatcccaat 425 ||||||||||||||||||||| Sbjct: 43298 aagaattcaaaacatcccaat 43278
>gb|AC009721.9| Homo sapiens 12q24.1-116.6-118.9 BAC RP11-129O9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166765 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 gaaataaagaataccaatctt 360 ||||||||||||||||||||| Sbjct: 45042 gaaataaagaataccaatctt 45062
>gb|AC096567.3| Homo sapiens BAC clone RP11-293A4 from 4, complete sequence Length = 126750 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 411 tcaaaacatcccaatgcgata 431 ||||||||||||||||||||| Sbjct: 120694 tcaaaacatcccaatgcgata 120714
>gb|AC009682.7| Homo sapiens chromosome 8, clone RP11-72O13, complete sequence Length = 155428 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 656 taacataatgttggatccatt 676 ||||||||||||||||||||| Sbjct: 135822 taacataatgttggatccatt 135802
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 ggaacaagaagaaaaagaaaa 109 ||||||||||||||||||||| Sbjct: 2968282 ggaacaagaagaaaaagaaaa 2968302
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 aaagaatttatcacacaaatagtca 58 |||||||||||||||| |||||||| Sbjct: 3516299 aaagaatttatcacacgaatagtca 3516275
>gb|AC103725.5| Homo sapiens chromosome 8, clone RP11-598A18, complete sequence Length = 172945 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 656 taacataatgttggatccatt 676 ||||||||||||||||||||| Sbjct: 144678 taacataatgttggatccatt 144698
>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0026H19, complete sequence Length = 150620 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 34 aaagaatttatcacacaaatagtca 58 |||||||||||||||| |||||||| Sbjct: 33841 aaagaatttatcacacgaatagtca 33817
>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0443G08 Length = 162139 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 ggaacaagaagaaaaagaaaa 109 ||||||||||||||||||||| Sbjct: 141344 ggaacaagaagaaaaagaaaa 141364
>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1349_D05 Length = 174478 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 ggaacaagaagaaaaagaaaa 109 ||||||||||||||||||||| Sbjct: 19005 ggaacaagaagaaaaagaaaa 19025
>dbj|AK073149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033010L07, full insert sequence Length = 2315 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 ggaacaagaagaaaaagaaaa 109 ||||||||||||||||||||| Sbjct: 939 ggaacaagaagaaaaagaaaa 959
>gb|AC113278.15| Mus musculus chromosome 3, clone RP23-387I7, complete sequence Length = 180681 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 agagcaaatgatcttattcgc 155 ||||||||||||||||||||| Sbjct: 40348 agagcaaatgatcttattcgc 40328
>dbj|AP005790.2| Homo sapiens genomic DNA, chromosome 8q24, clone: KB232A8, complete sequence Length = 122921 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 656 taacataatgttggatccatt 676 ||||||||||||||||||||| Sbjct: 117340 taacataatgttggatccatt 117360
>gb|AC148977.3| Mus musculus BAC clone RP23-387F1 from 7, complete sequence Length = 201967 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 gggaacaagaagaaaaagaaaaggc 112 |||||||| |||||||||||||||| Sbjct: 193005 gggaacaaaaagaaaaagaaaaggc 192981
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 42.1 bits (21), Expect = 2.4 Identities = 54/65 (83%) Strand = Plus / Minus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttct 389 ||||| ||| ||||||| |||| || || ||||| |||||||| ||| |||| |||||| Sbjct: 18547 ttgttaaatagaaataaggaatgtcagtcgttgataattttgtcagcagccaattgttct 18488 Query: 390 cgaat 394 ||||| Sbjct: 18487 cgaat 18483
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 505 atttttcttcatcttactatttactaacgcataataaaatc 545 |||||| ||||| |||| ||||| |||| |||||||||||| Sbjct: 43527 attttttttcattttaccatttaataactcataataaaatc 43567 Score = 40.1 bits (20), Expect = 9.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 46 acacaaatagtcaatttgttagaacttgcttagtagtgaattgg 89 |||||| || |||||| ||| ||||||||||||| |||||||| Sbjct: 43032 acacaagtattcaattagttcgaacttgcttagtcttgaattgg 43075
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 42.1 bits (21), Expect = 2.4 Identities = 87/109 (79%) Strand = Plus / Minus Query: 330 ttgttgaatcgaaataaagaataccaatctttgatgattttgtcggcatccaactgttct 389 ||||| ||| ||||||| |||| || || ||||| |||||||| ||| |||| |||||| Sbjct: 18499 ttgttaaatagaaataaggaatgtcagtcgttgataattttgtcagcagccaattgttct 18440 Query: 390 cgaattggtttattcaagaattcaaaacatcccaatgcgataaaagaat 438 ||||| || ||||||| || |||| ||| || || ||||||||||| Sbjct: 18439 cgaatggggccattcaaggatgtaaaatatcacagtgtgataaaagaat 18391
>dbj|AP008240.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT39G20, TM0353a, complete sequence Length = 78736 Score = 42.1 bits (21), Expect = 2.4 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 611 atactctttaatag-atgaaaataaaagg 638 |||||||||||||| |||||||||||||| Sbjct: 11969 atactctttaatagaatgaaaataaaagg 11941
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 505 atttttcttcatcttactatttactaacgcataataaaatc 545 |||||| ||||| |||| ||||| |||| |||||||||||| Sbjct: 51797 attttttttcattttaccatttaataactcataataaaatc 51757 Score = 40.1 bits (20), Expect = 9.4 Identities = 38/44 (86%) Strand = Plus / Minus Query: 46 acacaaatagtcaatttgttagaacttgcttagtagtgaattgg 89 |||||| || |||||| ||| ||||||||||||| |||||||| Sbjct: 52292 acacaagtattcaattagttcgaacttgcttagtcttgaattgg 52249
>emb|AL604045.7| Mouse DNA sequence from clone RP23-418O11 on chromosome 11, complete sequence Length = 221399 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 aacaagaagaaaaagaaaagg 111 ||||||||||||||||||||| Sbjct: 100174 aacaagaagaaaaagaaaagg 100194
>dbj|D87922.1| Rat DNA for 3'UTR of skeletal muscle sodium channel, partial sequence Length = 1867 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 aacaagaagaaaaagaaaagg 111 ||||||||||||||||||||| Sbjct: 967 aacaagaagaaaaagaaaagg 947
>gb|AY803272.1| Homo sapiens AKAP9-BRAF fusion protein mRNA, complete cds Length = 4567 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 acaagaagaaaaagaaaagg 111 |||||||||||||||||||| Sbjct: 2241 acaagaagaaaaagaaaagg 2260
>ref|XM_631229.1| Dictyostelium discoideum hypothetical protein (DDB0188343), partial mRNA Length = 3111 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaacaagaagaaaaagaaaa 109 |||||||||||||||||||| Sbjct: 139 gaacaagaagaaaaagaaaa 158
>ref|XM_519576.1| PREDICTED: Pan troglodytes LOC463952 (LOC463952), mRNA Length = 2805 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 acaagaagaaaaagaaaagg 111 |||||||||||||||||||| Sbjct: 771 acaagaagaaaaagaaaagg 790
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 670 atccattccttttgaattgt 689 |||||||||||||||||||| Sbjct: 717346 atccattccttttgaattgt 717365
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ggaacaagaagaaaaagaaa 108 |||||||||||||||||||| Sbjct: 1476350 ggaacaagaagaaaaagaaa 1476369
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ggaacaagaagaaaaagaaa 108 |||||||||||||||||||| Sbjct: 1452017 ggaacaagaagaaaaagaaa 1452036
>gb|AC183665.2| Pan troglodytes BAC clone CH251-655J2 from chromosome unknown, complete sequence Length = 194692 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 acaagaagaaaaagaaaagg 111 |||||||||||||||||||| Sbjct: 87390 acaagaagaaaaagaaaagg 87409
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ggaacaagaagaaaaagaaa 108 |||||||||||||||||||| Sbjct: 1451962 ggaacaagaagaaaaagaaa 1451981
>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome Length = 1545895 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 618 ttaatagatgaaaataaaaggatt 641 ||||||||||||| |||||||||| Sbjct: 912657 ttaatagatgaaattaaaaggatt 912680
>gb|AC154330.2| Mus musculus BAC clone RP23-286H23 from chromosome 16, complete sequence Length = 203553 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 aagaattcaaaacatcccaa 424 |||||||||||||||||||| Sbjct: 74151 aagaattcaaaacatcccaa 74132
>gb|AC164554.2| Mus musculus BAC clone RP23-351O14 from chromosome 17, complete sequence Length = 192632 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 gggaacaagaagaaaaagaaaagg 111 ||||| |||||||||||||||||| Sbjct: 85798 gggaaaaagaagaaaaagaaaagg 85775
>gb|DQ222853.1| Bacillus anthracis phage Gamma isolate 51, complete genome Length = 37253 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaacaagaagaaaaagaaaa 109 |||||||||||||||||||| Sbjct: 27684 gaacaagaagaaaaagaaaa 27703
>gb|DQ222851.1| Bacillus anthracis phage Cherry, complete genome Length = 36615 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaacaagaagaaaaagaaaa 109 |||||||||||||||||||| Sbjct: 27046 gaacaagaagaaaaagaaaa 27065
>emb|AJ243754.2|SAL243754 Sinapis alba chloroplast rpoB operon (rpoB, rpoC1 and rpoC2 genes) Length = 11206 Score = 40.1 bits (20), Expect = 9.4 Identities = 50/60 (83%) Strand = Plus / Plus Query: 150 attcgcgatttcctaagaattgagttagtcaagtccactatttcgtatacacgaaaaagg 209 ||||| |||||| ||||||||| ||||| || ||| ||||||||||| | |||||||| Sbjct: 9493 attcgagatttcataagaattggcttagtgaaatcccatatttcgtatataagaaaaagg 9552
>emb|Z79755.1|CEF43G9 Caenorhabditis elegans Cosmid F43G9, complete sequence Length = 38166 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 gaagaaaaagaaaaggctgg 115 |||||||||||||||||||| Sbjct: 20435 gaagaaaaagaaaaggctgg 20416
>gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 2 of 11 of the complete sequence Length = 613322 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 cacaaatagtcaatttgttagaac 70 |||||| ||||||||||||||||| Sbjct: 258953 cacaaacagtcaatttgttagaac 258976
>ref|XM_960931.1| Plasmodium falciparum 3D7 hypothetical protein (PFF0165c) partial mRNA Length = 3312 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaacaagaagaaaaagaaaa 109 |||||||||||||||||||| Sbjct: 934 gaacaagaagaaaaagaaaa 953
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ggaacaagaagaaaaagaaa 108 |||||||||||||||||||| Sbjct: 1486967 ggaacaagaagaaaaagaaa 1486986
>emb|AL590868.10| Human DNA sequence from clone RP11-105L5 on chromosome 6 Contains part of the gene for phenylalanine-tRNA synthetase (FARS1), complete sequence Length = 71257 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 aagaagaaaaagaaaaggct 113 |||||||||||||||||||| Sbjct: 37843 aagaagaaaaagaaaaggct 37824
>emb|AL162717.10| Human DNA sequence from clone RP11-123H22 on chromosome 13q14.2-21.2 Contains a novel gene, complete sequence Length = 153859 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 cacaaatagtcaatttgttagaac 70 |||||| ||||||||||||||||| Sbjct: 138483 cacaaacagtcaatttgttagaac 138506
>gb|DQ289555.1| Bacillus anthracis phage W Beta, complete genome Length = 40867 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaacaagaagaaaaagaaaa 109 |||||||||||||||||||| Sbjct: 29845 gaacaagaagaaaaagaaaa 29864
>gb|DQ289556.1| Bacillus anthracis phage Gamma isolate d'Herelle, complete genome Length = 37373 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaacaagaagaaaaagaaaa 109 |||||||||||||||||||| Sbjct: 27813 gaacaagaagaaaaagaaaa 27832
>emb|AL117353.6|HSJ944F13 Human DNA sequence from clone RP5-944F13 on chromosome 1p31.2-32.1 Contains part of gene KIAA1365, complete sequence Length = 113515 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 aacaagaagaaaaagaaaag 110 |||||||||||||||||||| Sbjct: 5111 aacaagaagaaaaagaaaag 5092
>gb|AC139100.3| Homo sapiens chromosome 18, clone, complete sequence Length = 276546 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 ctggtgcttcccttgttgag 131 |||||||||||||||||||| Sbjct: 187615 ctggtgcttcccttgttgag 187596
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 670 atccattccttttgaattgt 689 |||||||||||||||||||| Sbjct: 801870 atccattccttttgaattgt 801889
>emb|CR626928.1| Bacteroides fragilis NCTC 9343 pBF9343 plasmid Length = 36560 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 agaagaaaaagaaaaggctg 114 |||||||||||||||||||| Sbjct: 21768 agaagaaaaagaaaaggctg 21787
>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5 Length = 349418 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gaacaagaagaaaaagaaaa 109 |||||||||||||||||||| Sbjct: 135525 gaacaagaagaaaaagaaaa 135506
>emb|AL670005.1|NCB11H24 Neurospora crassa DNA linkage group V BAC clone B11H24 Length = 72580 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gaacaagaagaaaaagaaaa 109 |||||||||||||||||||| Sbjct: 69216 gaacaagaagaaaaagaaaa 69197
>emb|AL513444.1|NCB11N2 Neurospora crassa DNA linkage group V BAC contig B11N2 Length = 99360 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaacaagaagaaaaagaaaa 109 |||||||||||||||||||| Sbjct: 95019 gaacaagaagaaaaagaaaa 95038
>gb|AY119698.1| Bangia atropurpurea photosystem I P700 chlorophyll A apoprotein A1 (psaA) gene, partial cds; chloroplast gene for chloroplast product Length = 1395 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 aaaagaatggaatcctagaa 450 |||||||||||||||||||| Sbjct: 1167 aaaagaatggaatcctagaa 1148
>gb|AC154873.6| Mus musculus chromosome 1, clone RP23-71J17, complete sequence Length = 256719 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaacaagaagaaaaagaaaa 109 |||||||||||||||||||| Sbjct: 69960 gaacaagaagaaaaagaaaa 69979
>gb|AC127503.3| Homo sapiens chromosome 18, clone RP11-245M2, complete sequence Length = 145418 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ctggtgcttcccttgttgag 131 |||||||||||||||||||| Sbjct: 85891 ctggtgcttcccttgttgag 85910
>gb|AC068530.16| Homo sapiens chromosome 18, clone RP11-565D23, complete sequence Length = 166392 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 ctggtgcttcccttgttgag 131 |||||||||||||||||||| Sbjct: 91397 ctggtgcttcccttgttgag 91378
>ref|NM_005751.3| Homo sapiens A kinase (PRKA) anchor protein (yotiao) 9 (AKAP9), transcript variant 2, mRNA Length = 12462 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 acaagaagaaaaagaaaagg 111 |||||||||||||||||||| Sbjct: 2418 acaagaagaaaaagaaaagg 2437
>ref|NM_147171.1| Homo sapiens A kinase (PRKA) anchor protein (yotiao) 9 (AKAP9), transcript variant 1, mRNA Length = 12474 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 acaagaagaaaaagaaaagg 111 |||||||||||||||||||| Sbjct: 2454 acaagaagaaaaagaaaagg 2473
>ref|NM_147166.1| Homo sapiens A kinase (PRKA) anchor protein (yotiao) 9 (AKAP9), transcript variant 4, mRNA Length = 6058 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 acaagaagaaaaagaaaagg 111 |||||||||||||||||||| Sbjct: 2454 acaagaagaaaaagaaaagg 2473
>ref|NM_147185.1| Homo sapiens A kinase (PRKA) anchor protein (yotiao) 9 (AKAP9), transcript variant 3, mRNA Length = 12450 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 acaagaagaaaaagaaaagg 111 |||||||||||||||||||| Sbjct: 2418 acaagaagaaaaagaaaagg 2437
>gb|AC093438.2| Drosophila melanogaster 3L BAC RP98-26C20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167344 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 626 tgaaaataaaaggatttcca 645 |||||||||||||||||||| Sbjct: 79075 tgaaaataaaaggatttcca 79094
>dbj|AK056304.1| Homo sapiens cDNA FLJ31742 fis, clone NT2RI2007214 Length = 3205 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 ctggtgcttcccttgttgag 131 |||||||||||||||||||| Sbjct: 824 ctggtgcttcccttgttgag 805
>gb|AC067819.10| Homo sapiens chromosome 18, clone RP11-585K6, complete sequence Length = 216972 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 aattcaaaacatcccaatgc 427 |||||||||||||||||||| Sbjct: 174771 aattcaaaacatcccaatgc 174752
>gb|AC025895.9| Homo sapiens, clone RP11-610C20, complete sequence Length = 179113 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 ttgggaacaagaagaaaaagaaaa 109 ||||||||||||||||||| |||| Sbjct: 35670 ttgggaacaagaagaaaaacaaaa 35693
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gaacaagaagaaaaagaaaa 109 |||||||||||||||||||| Sbjct: 2300901 gaacaagaagaaaaagaaaa 2300882
>dbj|AP005827.1| Mus musculus genomic DNA, chromosome 16 clone:RP21-668B6, complete sequence Length = 214865 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 aagaattcaaaacatcccaa 424 |||||||||||||||||||| Sbjct: 151556 aagaattcaaaacatcccaa 151575
>gb|AC109357.3| Homo sapiens BAC clone RP11-636M7 from 4, complete sequence Length = 110883 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 aatagatgaaaataaaagga 639 |||||||||||||||||||| Sbjct: 44064 aatagatgaaaataaaagga 44045
>gb|AC093828.3| Homo sapiens BAC clone RP11-398J18 from 4, complete sequence Length = 146072 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 615 tctttaatagatgaaaataa 634 |||||||||||||||||||| Sbjct: 12939 tctttaatagatgaaaataa 12958
>gb|AC027779.10| Homo sapiens chromosome 11, clone RP11-98J9, complete sequence Length = 149059 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 515 atcttactatttactaacgc 534 |||||||||||||||||||| Sbjct: 121474 atcttactatttactaacgc 121455
>emb|BX890601.10| Zebrafish DNA sequence from clone CH211-51F19 in linkage group 14, complete sequence Length = 124859 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaacaagaagaaaaagaaaa 109 |||||||||||||||||||| Sbjct: 105164 gaacaagaagaaaaagaaaa 105183
>dbj|AK035814.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630007E23 product:hypothetical protein, full insert sequence Length = 1461 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaacaagaagaaaaagaaaa 109 |||||||||||||||||||| Sbjct: 796 gaacaagaagaaaaagaaaa 815
>dbj|AK028922.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732470M22 product:hypothetical protein, full insert sequence Length = 3679 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaacaagaagaaaaagaaaa 109 |||||||||||||||||||| Sbjct: 603 gaacaagaagaaaaagaaaa 622
>ref|NM_059936.2| Caenorhabditis elegans FERtilization defective (abnormal sperm) family member (fer-1) (fer-1) mRNA, complete cds Length = 6174 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gaagaaaaagaaaaggctgg 115 |||||||||||||||||||| Sbjct: 4033 gaagaaaaagaaaaggctgg 4052
>dbj|AK034159.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330160J08 product:unclassifiable, full insert sequence Length = 2230 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaacaagaagaaaaagaaaa 109 |||||||||||||||||||| Sbjct: 497 gaacaagaagaaaaagaaaa 516
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 40.1 bits (20), Expect = 9.4 Identities = 50/60 (83%) Strand = Plus / Minus Query: 150 attcgcgatttcctaagaattgagttagtcaagtccactatttcgtatacacgaaaaagg 209 ||||| |||||| ||||||||| ||||| || ||| ||||||||||| | |||||||| Sbjct: 17110 attcgagatttcataagaattggcttagtgaaatcccatatttcgtatataagaaaaagg 17051
>gb|AC156644.2| Pan troglodytes BAC clone CH251-301K8 from chromosome unknown, complete sequence Length = 165832 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 620 aatagatgaaaataaaagga 639 |||||||||||||||||||| Sbjct: 7048 aatagatgaaaataaaagga 7029
>gb|AC154340.3| Mus musculus BAC clone RP23-238B22 from chromosome 14, complete sequence Length = 210115 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 aacaagaagaaaaagaaaag 110 |||||||||||||||||||| Sbjct: 124548 aacaagaagaaaaagaaaag 124567
>gb|AC112715.4| Homo sapiens BAC clone RP11-370L10 from 2, complete sequence Length = 99901 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 ttgggaacaagaagaaaaagaaaa 109 ||||||||||||||||||| |||| Sbjct: 62346 ttgggaacaagaagaaaaacaaaa 62369
>gb|AY696297.1| Plasmopara viticola isolate MIC 18 ATP synthase F0 subunit 9 (ATP9) gene, partial cds; NADH dehydrogenase subunit 9 (NAD9) and apocytochrome b (COB) genes, complete cds; and NADH dehydrogenase subunit 5 (NAD5) gene, partial cds; mitochondrial Length = 2528 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 atcacacaaatagtcaattt 62 |||||||||||||||||||| Sbjct: 360 atcacacaaatagtcaattt 379
>ref|NM_001024470.1| Mus musculus RIKEN cDNA 4930523C07 gene (4930523C07Rik), mRNA Length = 1461 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaacaagaagaaaaagaaaa 109 |||||||||||||||||||| Sbjct: 796 gaacaagaagaaaaagaaaa 815
>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0039M16 Length = 133229 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 aaaaaggtatgataggacaa 222 |||||||||||||||||||| Sbjct: 86263 aaaaaggtatgataggacaa 86244
>gb|AC150478.3| Monodelphis domestica clone VMRC6-508P4, complete sequence Length = 81497 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 cacaaatagtcaatttgtta 66 |||||||||||||||||||| Sbjct: 22069 cacaaatagtcaatttgtta 22050
>dbj|AP005807.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0018H10 Length = 135879 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 aaaaaggtatgataggacaa 222 |||||||||||||||||||| Sbjct: 123490 aaaaaggtatgataggacaa 123471
>gb|AC147872.3| Monodelphis domestica clone VMRC6-555H19, complete sequence Length = 139145 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 cacaaatagtcaatttgtta 66 |||||||||||||||||||| Sbjct: 138083 cacaaatagtcaatttgtta 138064
>gb|AC000066.1|AC000066 Homo sapiens BAC clone CTA-293F11 from 7q21-7q22, complete sequence Length = 94960 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 acaagaagaaaaagaaaagg 111 |||||||||||||||||||| Sbjct: 47415 acaagaagaaaaagaaaagg 47434
>emb|AJ010770.1|HSA010770 Homo sapiens hyperion gene, exons 1-50 Length = 170008 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 acaagaagaaaaagaaaagg 111 |||||||||||||||||||| Sbjct: 61524 acaagaagaaaaagaaaagg 61543
>emb|AJ131693.1|HSA131693 Homo sapiens mRNA for AKAP450 protein Length = 12465 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 acaagaagaaaaagaaaagg 111 |||||||||||||||||||| Sbjct: 2418 acaagaagaaaaagaaaagg 2437
>gb|AC154777.2| Mus musculus BAC clone RP24-459H24 from 14, complete sequence Length = 155730 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaacaagaagaaaaagaaaa 109 |||||||||||||||||||| Sbjct: 125418 gaacaagaagaaaaagaaaa 125437
>gb|AF026245.1|AF026245 Homo sapiens yotiao mRNA, complete cds Length = 6018 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 acaagaagaaaaagaaaagg 111 |||||||||||||||||||| Sbjct: 2416 acaagaagaaaaagaaaagg 2435
>gb|AF083037.1|AF083037 Homo sapiens A-kinase anchoring protein AKAP350 mRNA, partial cds Length = 11318 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 acaagaagaaaaagaaaagg 111 |||||||||||||||||||| Sbjct: 1266 acaagaagaaaaagaaaagg 1285
>gb|AC005909.1|AC005909 Homo sapiens chromosome 18 BAC RPCI11-128D14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 137557 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 aattcaaaacatcccaatgc 427 |||||||||||||||||||| Sbjct: 39218 aattcaaaacatcccaatgc 39199
>gb|AE003541.3| Drosophila melanogaster chromosome 3L, section 44 of 83 of the complete sequence Length = 265524 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 626 tgaaaataaaaggatttcca 645 |||||||||||||||||||| Sbjct: 90113 tgaaaataaaaggatttcca 90132
>gb|AC157763.2| Pan troglodytes BAC clone CH251-340C15 from chromosome unknown, complete sequence Length = 198239 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 aatagatgaaaataaaagga 639 |||||||||||||||||||| Sbjct: 115289 aatagatgaaaataaaagga 115308
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ggaacaagaagaaaaagaaa 108 |||||||||||||||||||| Sbjct: 1451894 ggaacaagaagaaaaagaaa 1451913
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 ggaacaagaagaaaaagaaa 108 |||||||||||||||||||| Sbjct: 1606148 ggaacaagaagaaaaagaaa 1606167
>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome Length = 1267782 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 acaagaagaaaaagaaaagg 111 |||||||||||||||||||| Sbjct: 60610 acaagaagaaaaagaaaagg 60629
>emb|CT009630.16| Mouse DNA sequence from clone RP23-12B13 on chromosome 17, complete sequence Length = 240447 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 gggaacaagaagaaaaagaaaagg 111 ||||| |||||||||||||||||| Sbjct: 97079 gggaaaaagaagaaaaagaaaagg 97102
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 agtcaatttgttagaacttgctta 77 ||||| |||||||||||||||||| Sbjct: 458230 agtcattttgttagaacttgctta 458253
>gb|U57652.1|CEU57652 Caenorhabditis elegans FER-1 (fer-1) gene, complete cds Length = 8639 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 gaagaaaaagaaaaggctgg 115 |||||||||||||||||||| Sbjct: 5871 gaagaaaaagaaaaggctgg 5890
>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold Length = 1833844 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 cacaaatagtcaatttgtta 66 |||||||||||||||||||| Sbjct: 1774416 cacaaatagtcaatttgtta 1774397
>emb|AL845519.6| Mouse DNA sequence from clone RP23-295F2 on chromosome 2, complete sequence Length = 164578 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaacaagaagaaaaagaaaa 109 |||||||||||||||||||| Sbjct: 12049 gaacaagaagaaaaagaaaa 12068
>dbj|AB019691.1| Homo sapiens mRNA for Centrosome- and Golgi-localized PKN-associated protein (CG-NAP), complete cds Length = 12278 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 acaagaagaaaaagaaaagg 111 |||||||||||||||||||| Sbjct: 2282 acaagaagaaaaagaaaagg 2301 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,804,974 Number of Sequences: 3902068 Number of extensions: 8804974 Number of successful extensions: 220975 Number of sequences better than 10.0: 203 Number of HSP's better than 10.0 without gapping: 204 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 218086 Number of HSP's gapped (non-prelim): 2886 length of query: 689 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 666 effective length of database: 17,143,297,704 effective search space: 11417436270864 effective search space used: 11417436270864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
