| Clone Name | basd23c17 |
|---|---|
| Clone Library Name | barley_pub |
>MT2C_RABIT (P80290) Metallothionein-2C (MT-2C) (Metallothionein-IIC) (MT-IIC)| Length = 62 Score = 30.0 bits (66), Expect = 2.7 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +1 Query: 169 PNCQAQATSVSSCSCHQSCMCKLWK 243 PNC AT+ SC+C SC CK K Sbjct: 3 PNCSC-ATAGDSCTCANSCTCKACK 26
>MT1G_HUMAN (P13640) Metallothionein-1G (MT-1G) (Metallothionein-IG) (MT-IG)| (Metallothionein-1K) (MT-1K) Length = 62 Score = 29.3 bits (64), Expect = 4.5 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +1 Query: 169 PNCQAQATSVSSCSCHQSCMCK 234 PNC A VS C+C SC CK Sbjct: 3 PNCSCAAAGVS-CTCASSCKCK 23
>MT_ARIAR (P55946) Metallothionein (MT)| Length = 66 Score = 28.9 bits (63), Expect = 5.9 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +1 Query: 175 CQAQATSVSSCSCHQSCMCK 234 C + T +SC C+ SC CK Sbjct: 47 CGKECTGAASCKCNSSCSCK 66
>MT4_DROME (Q8I9B4) Metallothionein-4 (MT-4) (Metallothionein D)| Length = 44 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 1/24 (4%) Frame = +1 Query: 163 CLPNCQAQATSVS-SCSCHQSCMC 231 C NCQ AT +C+C Q C C Sbjct: 6 CGTNCQCSATKCGDNCACSQQCQC 29
>MT2A_RABIT (P18055) Metallothionein-2A (MT-2A) (Metallothionein-IIA) (MT-IIA)| Length = 62 Score = 28.5 bits (62), Expect = 7.7 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = +1 Query: 169 PNCQAQATSVSSCSCHQSCMCKLWK 243 PNC A SC+C SC CK K Sbjct: 3 PNCSCAAAG-DSCTCANSCTCKACK 26
>NACH_DROVI (Q9NJP2) Sodium channel protein Nach (Fragment)| Length = 384 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 136 HYSDPMFPTCLPNCQAQATSVSSCSCH 216 ++SD ++P C NC+A+ V C CH Sbjct: 183 YFSDYVYPNCELNCRAK-NMVKLCGCH 208
>TCOF_HUMAN (Q13428) Treacle protein (Treacher Collins syndrome protein)| Length = 1411 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -3 Query: 184 ALGNLANMSGTWGRCSGWPQQAGRTLLTVRIQKQRTSSRSKEQ 56 +LGN+ T G PQ+AG + V+ +K +S S E+ Sbjct: 494 SLGNILQAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEE 536 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,636,045 Number of Sequences: 219361 Number of extensions: 817841 Number of successful extensions: 2448 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2300 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2445 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)