| Clone Name | basd23b06 |
|---|---|
| Clone Library Name | barley_pub |
>SET_HUMAN (Q01105) Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A)| (Template-activating factor I) (TAF-I) (HLA-DR-associated protein II) (PHAPII) (Inhibitor of granzyme A-activated DNase) (IGAAD) Length = 290 Score = 142 bits (357), Expect = 1e-33 Identities = 66/165 (40%), Positives = 107/165 (64%), Gaps = 4/165 (2%) Frame = +3 Query: 168 SIERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTIPDFWLTAFLSHP 347 +IE + E+Q+E++++NE+AS+++L+VEQKY+++R+P + +R ++I IP+FW+T F++HP Sbjct: 44 AIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHP 103 Query: 348 LLSELLTEEDQKMFKYLEXXXXXXXXXXXXGYSITLNFSENPYFEDRKLTKSYTFADDGT 527 +S LL EED++ YL GY I F ENPYFE++ L+K + + G Sbjct: 104 QVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGD 163 Query: 528 TTINATSIKWKEGMEI--NGNAIKKKGSKRPLVE--ESFFTWFTD 650 + +T IKWK G ++ + + K S++ E ESFFTWFTD Sbjct: 164 PSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTD 208
>SET_RAT (Q63945) Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A)| (Template-activating factor I) (TAF-I) (Liver regeneration-related protein LRRGR00002) Length = 289 Score = 142 bits (357), Expect = 1e-33 Identities = 66/165 (40%), Positives = 107/165 (64%), Gaps = 4/165 (2%) Frame = +3 Query: 168 SIERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTIPDFWLTAFLSHP 347 +IE + E+Q+E++++NE+AS+++L+VEQKY+++R+P + +R ++I IP+FW+T F++HP Sbjct: 43 AIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHP 102 Query: 348 LLSELLTEEDQKMFKYLEXXXXXXXXXXXXGYSITLNFSENPYFEDRKLTKSYTFADDGT 527 +S LL EED++ YL GY I F ENPYFE++ L+K + + G Sbjct: 103 QVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGD 162 Query: 528 TTINATSIKWKEGMEI--NGNAIKKKGSKRPLVE--ESFFTWFTD 650 + +T IKWK G ++ + + K S++ E ESFFTWFTD Sbjct: 163 PSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTD 207
>SET_MOUSE (Q9EQU5) Protein SET (Phosphatase 2A inhibitor I2PP2A) (I-2PP2A)| (Template-activating factor I) (TAF-I) Length = 289 Score = 142 bits (357), Expect = 1e-33 Identities = 66/165 (40%), Positives = 107/165 (64%), Gaps = 4/165 (2%) Frame = +3 Query: 168 SIERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTIPDFWLTAFLSHP 347 +IE + E+Q+E++++NE+AS+++L+VEQKY+++R+P + +R ++I IP+FW+T F++HP Sbjct: 43 AIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNHP 102 Query: 348 LLSELLTEEDQKMFKYLEXXXXXXXXXXXXGYSITLNFSENPYFEDRKLTKSYTFADDGT 527 +S LL EED++ YL GY I F ENPYFE++ L+K + + G Sbjct: 103 QVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGD 162 Query: 528 TTINATSIKWKEGMEI--NGNAIKKKGSKRPLVE--ESFFTWFTD 650 + +T IKWK G ++ + + K S++ E ESFFTWFTD Sbjct: 163 PSSKSTEIKWKSGKDLTKRSSQTQNKASRKRQHEEPESFFTWFTD 207
>SET_DROME (P53997) Protein SET| Length = 269 Score = 121 bits (304), Expect = 2e-27 Identities = 60/170 (35%), Positives = 104/170 (61%), Gaps = 9/170 (5%) Frame = +3 Query: 168 SIERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTIPDFWLTAFLSHP 347 ++E++ Q+E++ +NE+AS+++L+VEQKY+++R+P Y +R +++K IP+FW+T+F++HP Sbjct: 32 ALEQIDACQNEIDALNEKASEEILKVEQKYNKLRKPCYEKRSELVKRIPNFWVTSFINHP 91 Query: 348 LLSELLTEEDQKMFKYLEXXXXXXXXXXXXGYSITLNFSENPYFEDRKLTKSY-----TF 512 +S +L EE+++ L GY I +F ENPYFE++ LTK + Sbjct: 92 QVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYFENKVLTKEFHLNSAAA 151 Query: 513 ADDGT-TTINATSIKWKEGMEINGNAIKK---KGSKRPLVEESFFTWFTD 650 +++G +T IKWKEG + + K KR ++FF WF+D Sbjct: 152 SENGDWPASTSTPIKWKEGKNLLKLLLTKPYGNKKKRNSEYKTFFDWFSD 201
>TSYL4_MOUSE (Q8VD63) Testis-specific Y-encoded-like protein 4 (TSPY-like 4)| Length = 406 Score = 97.8 bits (242), Expect = 3e-20 Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 1/175 (0%) Frame = +3 Query: 129 GEENEQIDGALVLSIERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKT 308 G+E + + ++ L+ I EL VN +A L++E+K+ +RR RR II+ Sbjct: 182 GKEETRPRAPKINCMDSLEAIDQELSNVNAQADRAFLQLERKFGRMRRLHMQRRSFIIQN 241 Query: 309 IPDFWLTAFLSHPLLSELLTEEDQKMFKYLEXXXXXXXXXXXXGYSITLNFSENPYFEDR 488 IP FW+TAF +HP LS +++ +D+ M +Y+ G F NPYF + Sbjct: 242 IPGFWVTAFRNHPQLSPMISGQDEDMMRYMINLEVEELKQPRVGCKFKFIFQSNPYFRNE 301 Query: 489 KLTKSYTFADDGTTTINATSIKWKEGMEINGNAIK-KKGSKRPLVEESFFTWFTD 650 L K Y G +T I+W G E + + ++G+ P SFF WF+D Sbjct: 302 GLVKEYERRSSGRVVSLSTPIRWHRGQEPQAHIHRNREGNTIP----SFFNWFSD 352
>TSYL4_HUMAN (Q9UJ04) Testis-specific Y-encoded-like protein 4 (TSPY-like 4)| Length = 414 Score = 95.1 bits (235), Expect = 2e-19 Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 1/161 (0%) Frame = +3 Query: 171 IERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTIPDFWLTAFLSHPL 350 ++ L+ I EL VN +A L++E+K+ +RR RR II+ IP FW+TAF +HP Sbjct: 204 MDSLEAIDQELSNVNAQADRAFLQLERKFGRMRRLHMQRRSFIIQNIPGFWVTAFRNHPQ 263 Query: 351 LSELLTEEDQKMFKYLEXXXXXXXXXXXXGYSITLNFSENPYFEDRKLTKSYTFADDGTT 530 LS +++ +D+ M +Y+ G F NPYF + L K Y G Sbjct: 264 LSPMISGQDEDMLRYMINLEVEELKHPRAGCKFKFIFQGNPYFRNEGLVKEYERRSSGRV 323 Query: 531 TINATSIKWKEGMEINGNAIK-KKGSKRPLVEESFFTWFTD 650 +T I+W G + + + ++G+ P SFF WF+D Sbjct: 324 VSLSTPIRWHRGQDPQAHIHRNREGNTIP----SFFNWFSD 360
>TSYL3_HUMAN (Q9H489) Testis-specific Y-encoded-like protein 3 (TSPY-like 3)| Length = 355 Score = 93.6 bits (231), Expect = 5e-19 Identities = 54/165 (32%), Positives = 82/165 (49%) Frame = +3 Query: 153 GALVLSIERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTIPDFWLTA 332 GAL+ ++ L+ IQ E E V+ +A L +E+++ + R RR II+ IP FW+TA Sbjct: 142 GALI--VDPLEAIQWEAEAVSAQADRAYLPLERRFGRMHRLYLARRSFIIQNIPGFWVTA 199 Query: 333 FLSHPLLSELLTEEDQKMFKYLEXXXXXXXXXXXXGYSITLNFSENPYFEDRKLTKSYTF 512 FL+HP LS +++ D+ M YL G F NPYF+++ + K Y Sbjct: 200 FLNHPQLSAMISPRDEDMLCYLMNLEVRELRHSRTGCKFKFRFWSNPYFQNKVIVKEYEC 259 Query: 513 ADDGTTTINATSIKWKEGMEINGNAIKKKGSKRPLVEESFFTWFT 647 G AT I+W G E + + + R SFF+WF+ Sbjct: 260 RASGRVVSIATRIRWHWGQEPPALVHRNRDTVR-----SFFSWFS 299
>TSYL1_HUMAN (Q9H0U9) Testis-specific Y-encoded-like protein 1 (TSPY-like 1)| Length = 438 Score = 92.0 bits (227), Expect = 1e-18 Identities = 52/162 (32%), Positives = 79/162 (48%) Frame = +3 Query: 165 LSIERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTIPDFWLTAFLSH 344 L ++ L+ IQ EL+ VN +A ++E K+ +RR RR II+ IP FW+TAF +H Sbjct: 228 LRMDPLEAIQLELDTVNAQADRAFQQLEHKFGRMRRHYLERRNYIIQNIPGFWMTAFRNH 287 Query: 345 PLLSELLTEEDQKMFKYLEXXXXXXXXXXXXGYSITLNFSENPYFEDRKLTKSYTFADDG 524 P LS ++ +D +M +Y+ G F NPYF ++ + K Y G Sbjct: 288 PQLSAMIRGQDAEMLRYITNLEVKELRHPRTGCKFKFFFRRNPYFRNKLIVKEYEVRSSG 347 Query: 525 TTTINATSIKWKEGMEINGNAIKKKGSKRPLVEESFFTWFTD 650 +T I W+ G E + + + SFFTWF+D Sbjct: 348 RVVSLSTPIIWRRGHEPQSFIRRNQD-----LICSFFTWFSD 384
>TSYL1_MOUSE (O88852) Testis-specific Y-encoded-like protein 1 (TSPY-like 1)| Length = 379 Score = 90.9 bits (224), Expect = 3e-18 Identities = 52/157 (33%), Positives = 75/157 (47%) Frame = +3 Query: 180 LQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTIPDFWLTAFLSHPLLSE 359 L+ IQ EL+ VN +A +EQK+ +RR RR II+ IP FW+TAF +HP LS Sbjct: 174 LEAIQLELDTVNAQADRAFQHLEQKFGRMRRHYLERRNYIIQNIPGFWMTAFRNHPQLSA 233 Query: 360 LLTEEDQKMFKYLEXXXXXXXXXXXXGYSITLNFSENPYFEDRKLTKSYTFADDGTTTIN 539 ++ D +M +Y+ G F NPYF ++ + K Y G Sbjct: 234 MIRGRDAEMLRYVTSLEVKELRHPKTGCKFKFFFRRNPYFRNKLIVKEYEVRSSGRVVSL 293 Query: 540 ATSIKWKEGMEINGNAIKKKGSKRPLVEESFFTWFTD 650 +T I W+ G E + + + SFFTWF+D Sbjct: 294 STPIIWRRGHEPQSFIRRNQD-----LICSFFTWFSD 325
>SPR2_CAEEL (Q18240) Suppressor of presenilin 2| Length = 312 Score = 87.8 bits (216), Expect = 3e-17 Identities = 46/140 (32%), Positives = 76/140 (54%) Frame = +3 Query: 144 QIDGALVLSIERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTIPDFW 323 ++ G + + L IQ +L+ ++E A+++VL+VEQ +++ R P+Y +R + I +FW Sbjct: 22 EVAGPVKEKLIELDAIQHQLDVMSENAAEEVLKVEQIFNQKRLPIYEKRKKLTTKIDNFW 81 Query: 324 LTAFLSHPLLSELLTEEDQKMFKYLEXXXXXXXXXXXXGYSITLNFSENPYFEDRKLTKS 503 TAFL+H LLS + EE + + L G+ I + F N YF + +TKS Sbjct: 82 QTAFLNHHLLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNEVITKS 141 Query: 504 YTFADDGTTTINATSIKWKE 563 Y + +T T I+WKE Sbjct: 142 YHLQSESPST-EITEIEWKE 160
>TSPY1_HUMAN (Q01534) Testis-specific Y-encoded protein 1| Length = 308 Score = 83.2 bits (204), Expect = 7e-16 Identities = 48/161 (29%), Positives = 77/161 (47%) Frame = +3 Query: 168 SIERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTIPDFWLTAFLSHP 347 ++E L +Q ELE VN +A +K R+P RR +I+++P FW +HP Sbjct: 108 ALEELLAVQVELEPVNAQARKAFSRQREKMERRRKPHLDRRGAVIQSVPGFWANVIANHP 167 Query: 348 LLSELLTEEDQKMFKYLEXXXXXXXXXXXXGYSITLNFSENPYFEDRKLTKSYTFADDGT 527 +S L+T+ED+ M Y+ I L F NPYF+++ +TK Y Sbjct: 168 QMSALITDEDEDMLSYMVSLEVEEEKHPVHLCKIMLFFRSNPYFQNKVITKEYLVNITEY 227 Query: 528 TTINATSIKWKEGMEINGNAIKKKGSKRPLVEESFFTWFTD 650 ++T I+W E+ A +++ L +FF WF+D Sbjct: 228 RASHSTPIEWYPDYEV--EAYRRRHHNSSL---NFFNWFSD 263
>TSPY1_RAT (Q9R1M3) Testis-specific Y-encoded protein 1 (rTSPY)| Length = 334 Score = 75.5 bits (184), Expect = 1e-13 Identities = 39/129 (30%), Positives = 68/129 (52%) Frame = +3 Query: 171 IERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTIPDFWLTAFLSHPL 350 +E L+ +Q EL VN S ++ K +++RRP + RR II+ IP FW A ++HP Sbjct: 149 MEELELLQLELSFVNARCSGAFARIKAKVAKMRRPHFDRRKTIIQGIPGFWAKAMMNHPQ 208 Query: 351 LSELLTEEDQKMFKYLEXXXXXXXXXXXXGYSITLNFSENPYFEDRKLTKSYTFADDGTT 530 +S +++ +D+ + Y+ + FSENPYF + +TK Y + G Sbjct: 209 MSSIISNQDEDLLSYMLSLEVEEYNPGLRMCRMMFFFSENPYFRNDIVTKDYQLSIIGYK 268 Query: 531 TINATSIKW 557 ++++I+W Sbjct: 269 ESDSSTIEW 277
>ASP_PLAFS (P13825) Aspartic acid-rich protein precursor| Length = 253 Score = 74.3 bits (181), Expect = 3e-13 Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 3/159 (1%) Frame = +3 Query: 189 IQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTIPDFWLTAFLSHPLLSELLT 368 +Q ++E+++ + + + + ++++Y E ++P++ +R +II+ IP FW HP LS+++ Sbjct: 20 VQKDIEQLDIKCAHEQMNIQKQYDEKKKPLFEKRDEIIQKIPGFWANTLRKHPALSDIV- 78 Query: 369 EEDQKMFKYLEXXXXXXXXXXXXGYSITLNFSE--NPYFEDRKLTKSYTFADDGTTTINA 542 ED + +L Y IT F E + E L K TF ++ + Sbjct: 79 PEDIDILNHLVKLDLKDNMDNNGSYKITFIFGEKAKEFMEPLTLVKHVTFDNNQEKVVEC 138 Query: 543 TSIKWKEGME-INGNAIKKKGSKRPLVEESFFTWFTDTE 656 T IKWKEG I + + + S F WFT E Sbjct: 139 TRIKWKEGKNPIAAVTHNRSDLDNEIPKWSIFEWFTTDE 177
>YB31_SCHPO (P78920) Putative nucleosome assembly protein C2D10.11C| Length = 379 Score = 69.7 bits (169), Expect = 7e-12 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 25/152 (16%) Frame = +3 Query: 141 EQIDGALVLSIERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKT---- 308 E + A+ I L+ +Q + + + E K+L++E KY + +P++ RR +IIK Sbjct: 85 ESLAPAVQNRITALKGLQKDCDAIQYEFRQKMLDLETKYEKKYQPIFSRRAEIIKGVSEP 144 Query: 309 ---------------------IPDFWLTAFLSHPLLSELLTEEDQKMFKYLEXXXXXXXX 425 IP+FWLT + L+ E++T ED+ + + L Sbjct: 145 VDDELDHEEEIFQNNLPDPKGIPEFWLTCLHNVFLVGEMITPEDENVLRSLSDIRFTNLS 204 Query: 426 XXXXGYSITLNFSENPYFEDRKLTKSYTFADD 521 GY + F N YF ++ LTK+Y + DD Sbjct: 205 GDVHGYKLEFEFDSNDYFTNKILTKTYYYKDD 236
>NP1L1_MOUSE (P28656) Nucleosome assembly protein 1-like 1 (NAP-1-related| protein) (Brain protein DN38) Length = 391 Score = 66.6 bits (161), Expect = 6e-11 Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 24/178 (13%) Frame = +3 Query: 195 DELEKVNEEASDKV-LEVEQKYSEIRRPVYLRRCDIIKTIPDFWLTAFLSHPLLSELLTE 371 DE ++V+EE +K +E E+K E P K IP+FWLT F + LLS+++ E Sbjct: 137 DEEDEVSEELKEKAKIEDEKKDEEKEDP---------KGIPEFWLTVFKNVDLLSDMVQE 187 Query: 372 EDQKMFKYL-EXXXXXXXXXXXXGYSITLNFSENPYFEDRKLTKSY----------TFAD 518 D+ + K+L + + + +F N YF + LTK+Y F+ Sbjct: 188 HDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNDYFTNEVLTKTYRMRSEPDDSDPFSF 247 Query: 519 DGTTTINAT--SIKWKEGMEINGNAIKKK------GSKRPLVE----ESFFTWFTDTE 656 DG + T I WK+G + IKKK G+ R + + +SFF +F E Sbjct: 248 DGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPE 305
>NP1L1_HUMAN (P55209) Nucleosome assembly protein 1-like 1 (NAP-1-related| protein) (hNRP) Length = 391 Score = 66.2 bits (160), Expect = 8e-11 Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 24/178 (13%) Frame = +3 Query: 195 DELEKVNEEASDKV-LEVEQKYSEIRRPVYLRRCDIIKTIPDFWLTAFLSHPLLSELLTE 371 DE ++++EE +K +E E+K E P K IP+FWLT F + LLS+++ E Sbjct: 137 DEEDEISEELKEKAKIEDEKKDEEKEDP---------KGIPEFWLTVFKNVDLLSDMVQE 187 Query: 372 EDQKMFKYL-EXXXXXXXXXXXXGYSITLNFSENPYFEDRKLTKSY----------TFAD 518 D+ + K+L + + + +F N YF + LTK+Y F+ Sbjct: 188 HDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSF 247 Query: 519 DGTTTINAT--SIKWKEGMEINGNAIKKK------GSKRPLVE----ESFFTWFTDTE 656 DG + T I WK+G + IKKK G+ R + + +SFF +F E Sbjct: 248 DGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPE 305
>NP1L1_RAT (Q9Z2G8) Nucleosome assembly protein 1-like 1 (NAP-1-related| protein) Length = 390 Score = 62.8 bits (151), Expect = 9e-10 Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 24/178 (13%) Frame = +3 Query: 195 DELEKVNEEASDKV-LEVEQKYSEIRRPVYLRRCDIIKTIPDFWLTAFLSHPLLSELLTE 371 DE ++V+EE +K +E E+K E P K IP+FWLT F + LLS+++ E Sbjct: 137 DEEDEVSEELKEKAKIEDEKKDEEKEDP---------KGIPEFWLTVF-KNDLLSDMVQE 186 Query: 372 EDQKMFKYL-EXXXXXXXXXXXXGYSITLNFSENPYFEDRKLTKSY----------TFAD 518 D+ + K+L + + + +F N YF + LTK+Y F+ Sbjct: 187 HDEPILKHLKDIKVKFSDAGQPMSFILEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSF 246 Query: 519 DGTTTINAT--SIKWKEGMEINGNAIKKK------GSKRPLV----EESFFTWFTDTE 656 DG + T I WK+G + IKKK G+ R + + SFF +F E Sbjct: 247 DGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSKTSFFNFFAPPE 304
>TSPY1_BOVIN (O19110) Testis-specific Y-encoded protein 1 (bTSPY)| Length = 317 Score = 62.0 bits (149), Expect = 2e-09 Identities = 36/141 (25%), Positives = 64/141 (45%) Frame = +3 Query: 135 ENEQIDGALVLSIERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTIP 314 E +++D +++ L +Q EL E+ ++ +K + R+ RR II+ IP Sbjct: 120 ERQELD-----ALQALAALQVELSSEREQNRRAYVQFMRKNHQRRKRHLARRSTIIQGIP 174 Query: 315 DFWLTAFLSHPLLSELLTEEDQKMFKYLEXXXXXXXXXXXXGYSITLNFSENPYFEDRKL 494 FW A +SHP +S L++++DQ Y+ + +F +NPYF + + Sbjct: 175 GFWAKAIMSHPQVSVLISDQDQDFLGYMMDLKVQVRSHPPSRCKLIFSFRDNPYFLNSVI 234 Query: 495 TKSYTFADDGTTTINATSIKW 557 K Y G +T + W Sbjct: 235 IKEYYLDITGYRARRSTPVHW 255
>YCO6_SCHPO (O59797) Putative nucleosome assembly protein C364.06| Length = 393 Score = 58.5 bits (140), Expect = 2e-08 Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 17/168 (10%) Frame = +3 Query: 192 QDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTIPDFWLTAFLSHPLLSELLTE 371 ++E++K EA+D+ + E SE ++ D K IP+FWLTA + LSE++T Sbjct: 130 EEEIKK--GEAADENEKKEPTSSESKKQ---EGGDDTKGIPEFWLTAMKNVLSLSEMITP 184 Query: 372 EDQKMFKYLEXXXXXXXXXXXXGYSITLNFSENPYFEDRKLTKSYTFADD-GTTTI---- 536 ED+ +L G+ + F+ENP+F ++ LTK+Y + ++ G + + Sbjct: 185 EDEGALSHL--VDIRISYMEKPGFKLEFEFAENPFFTNKILTKTYYYMEESGPSNVFLYD 242 Query: 537 --NATSIKWKEGMEINGNAIKKKGS----------KRPLVEESFFTWF 644 + WKE ++ + KK K + +SFF +F Sbjct: 243 HAEGDKVDWKENADLTVRTVTKKQRNKNTKQTRVVKVSVPRDSFFNFF 290
>NP1L4_HUMAN (Q99733) Nucleosome assembly protein 1-like 4 (Nucleosome assembly| protein 2) (NAP2) Length = 375 Score = 57.4 bits (137), Expect = 4e-08 Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 23/173 (13%) Frame = +3 Query: 195 DELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTIPDFWLTAFLSHPLLSELLTEE 374 +E EK+ + KV+ E+ + P K IP+FW T F + +LSEL+ E Sbjct: 128 EEEEKLAGDMKSKVVVTEKAAATAEEPDP-------KGIPEFWFTIFRNVDMLSELVQEY 180 Query: 375 DQKMFKYLEXXXXXXXX-XXXXGYSITLNFSENPYFEDRKLTKSY----------TFADD 521 D+ + K+L+ + + +F N YF + LTK+Y F+ + Sbjct: 181 DEPILKHLQDIKVKFSDPGQPMSFVLEFHFEPNDYFTNSVLTKTYKMKSEPDKADPFSFE 240 Query: 522 GTTTI--NATSIKWKEGMEINGNAIKKK------GSKRPLVE----ESFFTWF 644 G + + +I WK+G + IKKK G+ R + + ESFF +F Sbjct: 241 GPEIVDCDGCTIDWKKGKNVTVKTIKKKQKHKGRGTVRTITKQVPNESFFNFF 293
>NP1L2_HUMAN (Q9ULW6) Nucleosome assembly protein 1-like 2 (Brain-specific| protein, X-linked) Length = 460 Score = 50.8 bits (120), Expect = 4e-06 Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 23/171 (13%) Frame = +3 Query: 204 EKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTIPDFWLTAFLSHPLLSELLTEEDQK 383 E+ EE D + ++ E P K IPDFWLT + L+ L+ + D+ Sbjct: 214 EEEEEEEEDDIEATGEENKEEEDP---------KGIPDFWLTVLKNVDTLTPLIKKYDEP 264 Query: 384 MFKYL-EXXXXXXXXXXXXGYSITLNFSENPYFEDRKLTKSYTFADD----------GTT 530 + K L + +++ +F N YF++ LTK+Y GT Sbjct: 265 ILKLLTDIKVKLSDPGEPLSFTLEFHFKPNEYFKNELLTKTYVLKSKLAYYDPHPYRGTA 324 Query: 531 TINAT--SIKWKEGMEINGNAIKKK------GSKRPLVE----ESFFTWFT 647 +T I W EG + IKKK G+ R + E +SFF +F+ Sbjct: 325 IEYSTGCEIDWNEGKNVTLKTIKKKQKHRIWGTIRTVTEDFPKDSFFNFFS 375
>NP1L2_MOUSE (P51860) Nucleosome assembly protein 1-like 2 (Brain-specific| protein, X-linked) Length = 460 Score = 50.4 bits (119), Expect = 5e-06 Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 23/138 (16%) Frame = +3 Query: 303 KTIPDFWLTAFLSHPLLSELLTEEDQKMFKYL-EXXXXXXXXXXXXGYSITLNFSENPYF 479 K IPDFWLT + L+ ++ + D+ + K L + +++ +F N YF Sbjct: 238 KGIPDFWLTVLKNVEALTPMIKKYDEPILKLLTDIKVKLSDPGEPLSFTLEFHFKPNEYF 297 Query: 480 EDRKLTKSYTFADD----------GTTTINAT--SIKWKEGMEINGNAIKKK------GS 605 ++ LTK+Y GT AT I W EG + IKKK G+ Sbjct: 298 KNELLTKTYVLKSKLACYDPHPYRGTAIEYATGCDIDWNEGKNVTLRTIKKKQRHRVWGT 357 Query: 606 KRPLVE----ESFFTWFT 647 R + E +SFF +F+ Sbjct: 358 VRTVTEDFPKDSFFNFFS 375
>NAP1_YEAST (P25293) Nucleosome assembly protein| Length = 417 Score = 48.5 bits (114), Expect = 2e-05 Identities = 35/156 (22%), Positives = 64/156 (41%), Gaps = 45/156 (28%) Frame = +3 Query: 180 LQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDII------------------- 302 L+ +Q EL +V +E ++ E+E K+ + +P++ +R II Sbjct: 99 LKTLQSELFEVEKEFQVEMFELENKFLQKYKPIWEQRSRIISGQEQPKPEQIAKGQEIVE 158 Query: 303 ------------------------KTIPDFWLTAFLSHPLLSELLTEEDQKMFKYLEXXX 410 K IP FWLTA + P++ + +T+ D ++ +YL+ Sbjct: 159 SLNETELLVDEEEKAQNDSEEEQVKGIPSFWLTALENLPIVCDTITDRDAEVLEYLQDIG 218 Query: 411 XXXXXXXXXGYSITLNF--SENPYFEDRKLTKSYTF 512 G+ + F S NP+F + L K+Y + Sbjct: 219 LEYLTDGRPGFKLLFRFDSSANPFFTNDILCKTYFY 254
>VPS75_YEAST (P53853) Vacuolar protein sorting protein 75| Length = 264 Score = 40.0 bits (92), Expect = 0.006 Identities = 46/192 (23%), Positives = 73/192 (38%), Gaps = 21/192 (10%) Frame = +3 Query: 132 EENEQIDGALVLSIERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTI 311 +ENE L + + +E D +E+ EVE +PVY +R I I Sbjct: 5 QENENEHAKAFLGLAKCEEEVDAIER----------EVELYRLNKMKPVYEKRDAYIDEI 54 Query: 312 PDFWLTAFLSHPLLSELLTEEDQKMFKYL--------EXXXXXXXXXXXXGYSITLNF-S 464 +FW H + + D FKY+ E +SIT +F Sbjct: 55 AEFWKIVLSQHVSFANYIRASD---FKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHG 111 Query: 465 ENPYFEDRKLTKSYTF------ADDGTTTINATSIKWKEGME-INGNAIKKKGS-----K 608 F+++++TK + +DG T I+W + + IN + IK K S K Sbjct: 112 IEGDFKEQQVTKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGKKK 171 Query: 609 RPLVEESFFTWF 644 ++ F WF Sbjct: 172 YRQGMKTIFGWF 183
>NP1L3_HUMAN (Q99457) Nucleosome assembly protein 1-like 3| Length = 506 Score = 38.5 bits (88), Expect = 0.018 Identities = 17/44 (38%), Positives = 30/44 (68%) Frame = +3 Query: 171 IERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDII 302 ++ L+ IQDE +KV+ + ++E+KY+E+ +P+Y RR II Sbjct: 108 VQALRNIQDECDKVDTLFLKAIHDLERKYAELNKPLYDRRFQII 151 Score = 37.7 bits (86), Expect = 0.031 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%) Frame = +3 Query: 303 KTIPDFWLTAFLSHPLLSELLTEEDQKMFKYL-EXXXXXXXXXXXXGYSITLNFSENPYF 479 K IPD+WL + L ++ + D+ + K+L + Y+ +F NPYF Sbjct: 309 KGIPDYWLIVLKNVDKLGPMIQKYDEPILKFLSDVSLKFSKPGQPVSYTFEFHFLPNPYF 368 Query: 480 EDRKLTKSY 506 + L K+Y Sbjct: 369 RNEVLVKTY 377
>KRP85_STRPU (P46872) Kinesin-II 85 kDa subunit (KRP-85/95 85 kDa subunit)| Length = 699 Score = 32.3 bits (72), Expect = 1.3 Identities = 19/90 (21%), Positives = 42/90 (46%) Frame = +3 Query: 132 EENEQIDGALVLSIERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTI 311 EE EQ+ L ++ Q+ + K+ EE + +++E+KYS ++ + + K + Sbjct: 489 EEQEQLLEQSALEMKERMAKQESMRKMMEEREQERMDIEEKYSSLQDEAHGK----TKKL 544 Query: 312 PDFWLTAFLSHPLLSELLTEEDQKMFKYLE 401 W + ++++ E ++M LE Sbjct: 545 KKVWTMLMQAKSEVADMQAEHQREMEALLE 574
>RGYR1_AERPE (Q9YCB6) Reverse gyrase 1 [Includes: Helicase (EC 3.6.1.-);| Topoisomerase (EC 5.99.1.3)] Length = 1376 Score = 32.0 bits (71), Expect = 1.7 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 6/61 (9%) Frame = +3 Query: 126 VGEENEQIDGAL-VLSIERLQE-----IQDELEKVNEEASDKVLEVEQKYSEIRRPVYLR 287 VG + E I+ L VL ++R Q +Q + E+V EEA K+LEV+++ + + R Sbjct: 245 VGFDEEAIEKGLEVLRLQREQARLVGLLQSQREEVREEARKKLLEVKRRLERLEAEIEAR 304 Query: 288 R 290 R Sbjct: 305 R 305
>Y121_ENCCU (Q8SQI8) Hypothetical protein ECU01_0210/ECU01_1400| Length = 179 Score = 32.0 bits (71), Expect = 1.7 Identities = 25/129 (19%), Positives = 51/129 (39%), Gaps = 2/129 (1%) Frame = +3 Query: 180 LQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKT--IPDFWLTAFLSHPLL 353 L EIQ ++++ + + + E + ++ + RP+ LRR +I + +W A Sbjct: 9 LDEIQRDIDEEHLVFARRDFECKLEHHKAIRPLLLRRDSVISEALLEMYWGRALAGFDAA 68 Query: 354 SELLTEEDQKMFKYLEXXXXXXXXXXXXGYSITLNFSENPYFEDRKLTKSYTFADDGTTT 533 +L + GY + + +EN + +R LTK D + Sbjct: 69 RGILPRDGCDRTSTQWMRSLVAEYLDGYGYRVHIELNENEFVSNRTLTKR---VDLSLAS 125 Query: 534 INATSIKWK 560 + T + W+ Sbjct: 126 VEKTGVVWR 134
>VPS13_YEAST (Q07878) Vacuolar protein sorting-associated protein VPS13| (Suppression of the onset of impotence protein 1) Length = 3144 Score = 32.0 bits (71), Expect = 1.7 Identities = 16/54 (29%), Positives = 31/54 (57%) Frame = +3 Query: 129 GEENEQIDGALVLSIERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRR 290 G+ E++D L+++ E+ QE+ D +E E VL+V ++ E+R L++ Sbjct: 468 GKPTEEVDEDLIMTEEQRQELYDAIEFDENEDKGPVLQVPRERVELRVTSLLKK 521
>CYAA_BACAN (P40136) Calmodulin-sensitive adenylate cyclase precursor (EC| 4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase) (Edema factor) (EF) (Anthrax edema toxin adenylate cyclase component) Length = 800 Score = 31.6 bits (70), Expect = 2.3 Identities = 41/201 (20%), Positives = 80/201 (39%), Gaps = 34/201 (16%) Frame = +3 Query: 168 SIERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTIPDFWLTAFLSHP 347 +++++Q+ QD L+K+ ++ VLE+ YSE+ +Y D+++ H Sbjct: 75 TLDKIQQTQDLLKKIPKD----VLEI---YSELGGEIYFTDIDLVE------------HK 115 Query: 348 LLSELLTEEDQKM------------FKYLEXXXXXXXXXXXXGYSITLNFSENPYFE--- 482 L +L EE M F + + Y+I S+ Y+E Sbjct: 116 ELQDLSEEEKNSMNSRGEKVPFASRFVFEKKRETPKLIINIKDYAINSEQSKEVYYEIGK 175 Query: 483 ---------DRKLTKSY-----TFADDGTTTINATSIKWKEGMEINGNAIKKKGSKRPLV 620 D+ L + + +DD ++ S K+KE +E+N +I K L Sbjct: 176 GISLDIISKDKSLDPEFLNLIKSLSDDSDSSDLLFSQKFKEKLELNNKSIDINFIKENLT 235 Query: 621 E-----ESFFTWFTDTEHKSL 668 E F+++ +H+++ Sbjct: 236 EFQHAFSLAFSYYFAPDHRTV 256
>MBB1A_MOUSE (Q7TPV4) Myb-binding protein 1A (Myb-binding protein of 160 kDa)| Length = 1344 Score = 30.4 bits (67), Expect = 5.0 Identities = 23/78 (29%), Positives = 40/78 (51%) Frame = +3 Query: 132 EENEQIDGALVLSIERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCDIIKTI 311 EE E D A++ + L + E +K+ +A ++ QK ++RR +R D+I+ + Sbjct: 776 EEEELGDEAMMALDQNLASLFKE-QKMRIQARNEEKNKLQKEKKLRRDFQIRALDLIEVL 834 Query: 312 PDFWLTAFLSHPLLSELL 365 +T HPL+ ELL Sbjct: 835 ----VTKQPEHPLILELL 848
>OFD1_HUMAN (O75665) Oral-facial-digital syndrome 1 protein (Protein 71-7A)| Length = 1012 Score = 30.0 bits (66), Expect = 6.6 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 3/48 (6%) Frame = +3 Query: 132 EENEQIDGALVLSIERLQEIQDELEKVNEEASDKVLEVE---QKYSEI 266 +E + I+ +L + I++ E+++ELE N+E DK E +KY +I Sbjct: 917 QERKMIEESLKIKIKKELEMENELEMSNQEIKDKSAHSENPLEKYMKI 964
>OMPA_THEMA (Q01969) Outer membrane protein alpha precursor| Length = 400 Score = 29.6 bits (65), Expect = 8.6 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 4/63 (6%) Frame = +3 Query: 126 VGEENEQIDGALVLSIERLQEIQDELEKVNEEASDKVLEVEQKYS----EIRRPVYLRRC 293 +G + ++G + L + + I +++ VNEE ++K+ E+K S EI V L Sbjct: 197 LGNKIADLEGIVNLHEKDIINIYNKISSVNEELNNKIAATEEKLSRKDEEISAMVELHEK 256 Query: 294 DII 302 DII Sbjct: 257 DII 259
>NUSB_THETN (Q8RAD1) N utilization substance protein B homolog (Protein nusB)| Length = 140 Score = 29.6 bits (65), Expect = 8.6 Identities = 12/31 (38%), Positives = 22/31 (70%) Frame = +3 Query: 129 GEENEQIDGALVLSIERLQEIQDELEKVNEE 221 GE+ E I+G + ++E L+EI E+EK +++ Sbjct: 38 GEQKEYIEGTVRGTVEHLEEIDREIEKYSKD 68
>MRAW_MYCPE (Q8EW81) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 312 Score = 29.6 bits (65), Expect = 8.6 Identities = 14/45 (31%), Positives = 27/45 (60%) Frame = +3 Query: 144 QIDGALVLSIERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPV 278 ++D L + + + QE+ E +N + +K++++ KY EIR PV Sbjct: 122 KLDARLDMRMNQNQELS-AYEVINNYSKEKLIQIFWKYGEIRNPV 165
>SPB1_USTMA (Q4P6G5) AdoMet-dependent rRNA methyltransferase SPB1 (EC 2.1.1.-)| (2'-O-ribose RNA methyltransferase) (S-adenosyl-L-methionine-dependent methyltransferase) Length = 921 Score = 29.6 bits (65), Expect = 8.6 Identities = 15/49 (30%), Positives = 28/49 (57%) Frame = +3 Query: 141 EQIDGALVLSIERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLR 287 EQ V ++ +I DEL ++NEEA+ K + ++ +E+R+ L+ Sbjct: 360 EQTQTVEVEEMDEDDQIDDELARLNEEAARKARKERRRKNELRQKKILK 408
>ING5_HUMAN (Q8WYH8) Inhibitor of growth protein 5 (p28ING5)| Length = 240 Score = 29.6 bits (65), Expect = 8.6 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +3 Query: 171 IERLQEIQDELEKVNEEASDKVLEVEQKYSEIRRPVYLRRCD 296 +ERLQ+IQ+ K E + DKV Q Y + + ++RR D Sbjct: 62 VERLQKIQNAYSKCKEYSDDKVQLAMQTYEMVDK--HIRRLD 101 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,727,076 Number of Sequences: 219361 Number of extensions: 1349473 Number of successful extensions: 4541 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 4336 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4510 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6484657212 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)