ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd23a21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009342.1| Triticum aestivum clone wlm4.pk0018.d5:fis, full insert mRNA sequence Length = 1719 Score = 985 bits (497), Expect = 0.0 Identities = 536/549 (97%) Strand = Plus / Plus Query: 2 cgagactttacaccaatgcaaactccttttttcatgagaaaggaaatcatggcaaaatgt 61 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 712 cgagaatttacaccaatgcaaactccttttttcatgagaaaggagatcatggcaaaatgt 771 Query: 62 gcccagttggcccaatttgatgaggagctctacaaagtaacaggtgacggagaggataag 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 gcccagttggcccaatttgatgaggagctctacaaagtaacaggtgacggagaggataag 831 Query: 122 tatctcatagcaacatcggagcaaccgctatgtgcttatcatctaggtgatcgaatttat 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 832 tatctcatagcaacatcggagcaaccgctatgtgcttatcatctaggtgatcgaatttat 891 Query: 182 cctgcagatttgccgatcagatatgctgggttctccacgtgcttccggaaagaagctggt 241 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 892 cctgcagatttgcctatcagatatgctgggttctccacgtgcttccggaaagaagctggt 951 Query: 242 tcacacgggagggacacagctggcatcttcagagtccaccagtttgaaaagatcgagcag 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 952 tcacacgggagggacacagctggcatcttcagagtccaccagtttgaaaagatcgagcag 1011 Query: 302 ttctgtgccacaaatccaaatgacaacgtatcctgggaaatgcatgaggagatgattaaa 361 ||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1012 ttctgcgccacaggtccaaatgacaatgtatcctgggaaatgcatgaggagatgattaaa 1071 Query: 362 aatgcagaagatttttatcaggcgattgggctaccatatcaactagtgtcgattgtctct 421 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 1072 aatgcagaagatttttatcaggcgattgggctaccatatcaactagtttcaattgtctct 1131 Query: 422 ggtgctcttaatgatgctgcagctaagaagtatgatttggaagcatggttccctgcatca 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1132 ggtgctcttaatgatgctgcagctaagaagtatgatttggaagcatggttccctgcatca 1191 Query: 482 aaaaccttcagagaactagtatcctgttcaaattgcactgattatcaggcaaggagactt 541 ||||||||| ||||| |||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 1192 aaaaccttccgagaattagtgtcctgttcaaattgcacagattatcaggcaaggagactt 1251 Query: 542 ggaataggc 550 ||||||||| Sbjct: 1252 ggaataggc 1260
>dbj|AK103101.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118N18, full insert sequence Length = 1846 Score = 571 bits (288), Expect = e-160 Identities = 474/536 (88%) Strand = Plus / Plus Query: 14 ccaatgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccagttggcc 73 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 668 ccaatgcaaactccttttttcatgagaaaggaaaccatgggaaaatgtgcccagttggcc 727 Query: 74 caatttgatgaggagctctacaaagtaacaggtgacggagaggataagtatctcatagca 133 ||||| || || ||||| ||||| ||||||| || |||||||| |||||||||||||| Sbjct: 728 caattcgacgaagagctttacaagctaacaggcgatggagaggaaaagtatctcatagct 787 Query: 134 acatcggagcaaccgctatgtgcttatcatctaggtgatcgaatttatcctgcagatttg 193 ||||| ||||||||| | ||||| |||||||| |||||||||||||||||||| || ||| Sbjct: 788 acatctgagcaaccgttgtgtgcgtatcatcttggtgatcgaatttatcctgctgaattg 847 Query: 194 ccgatcagatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagg 253 || || ||||||||||| | ||||| || ||||||||||||||||||||||| |||||| Sbjct: 848 ccaattagatatgctggatattccacctgtttccggaaagaagctggttcacatgggagg 907 Query: 254 gacacagctggcatcttcagagtccaccagtttgaaaagatcgagcagttctgtgccaca 313 ||||| ||||| ||||||||||||||||| |||||||||||||| || ||||||| |||| Sbjct: 908 gacacggctggtatcttcagagtccaccaatttgaaaagatcgaacaattctgtgtcaca 967 Query: 314 aatccaaatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagat 373 | |||||||||||| | ||| ||||| |||||||| || |||||||||||| |||||||| Sbjct: 968 agtccaaatgacaatgaatcttgggagatgcatgaagaaatgattaaaaattcagaagat 1027 Query: 374 ttttatcaggcgattgggctaccatatcaactagtgtcgattgtctctggtgctcttaat 433 || || ||| |||||| ||||| |||||||| || || || || ||||||||||||||| Sbjct: 1028 ttctacaaggagattggcctaccgtatcaacttgtctccatcgtgtctggtgctcttaat 1087 Query: 434 gatgctgcagctaagaagtatgatttggaagcatggttccctgcatcaaaaaccttcaga 493 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 1088 gatgctgcagctaagaagtatgatttagaagcatggttccctgcatcaaaaacctacagg 1147 Query: 494 gaactagtatcctgttcaaattgcactgattatcaggcaaggagacttggaatagg 549 ||| |||| ||||| ||||||||||| |||| ||| |||||||||||||| ||||| Sbjct: 1148 gaattagtgtcctgctcaaattgcacagattttcaagcaaggagacttggtatagg 1203
>dbj|AK059522.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C08, full insert sequence Length = 1842 Score = 571 bits (288), Expect = e-160 Identities = 474/536 (88%) Strand = Plus / Plus Query: 14 ccaatgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccagttggcc 73 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 664 ccaatgcaaactccttttttcatgagaaaggaaaccatgggaaaatgtgcccagttggcc 723 Query: 74 caatttgatgaggagctctacaaagtaacaggtgacggagaggataagtatctcatagca 133 ||||| || || ||||| ||||| ||||||| || |||||||| |||||||||||||| Sbjct: 724 caattcgacgaagagctttacaagctaacaggcgatggagaggaaaagtatctcatagct 783 Query: 134 acatcggagcaaccgctatgtgcttatcatctaggtgatcgaatttatcctgcagatttg 193 ||||| ||||||||| | ||||| |||||||| |||||||||||||||||||| || ||| Sbjct: 784 acatctgagcaaccgttgtgtgcgtatcatcttggtgatcgaatttatcctgctgaattg 843 Query: 194 ccgatcagatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagg 253 || || ||||||||||| | ||||| || ||||||||||||||||||||||| |||||| Sbjct: 844 ccaattagatatgctggatattccacctgtttccggaaagaagctggttcacatgggagg 903 Query: 254 gacacagctggcatcttcagagtccaccagtttgaaaagatcgagcagttctgtgccaca 313 ||||| ||||| ||||||||||||||||| |||||||||||||| || ||||||| |||| Sbjct: 904 gacacggctggtatcttcagagtccaccaatttgaaaagatcgaacaattctgtgtcaca 963 Query: 314 aatccaaatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagat 373 | |||||||||||| | ||| ||||| |||||||| || |||||||||||| |||||||| Sbjct: 964 agtccaaatgacaatgaatcttgggagatgcatgaagaaatgattaaaaattcagaagat 1023 Query: 374 ttttatcaggcgattgggctaccatatcaactagtgtcgattgtctctggtgctcttaat 433 || || ||| |||||| ||||| |||||||| || || || || ||||||||||||||| Sbjct: 1024 ttctacaaggagattggcctaccgtatcaacttgtctccatcgtgtctggtgctcttaat 1083 Query: 434 gatgctgcagctaagaagtatgatttggaagcatggttccctgcatcaaaaaccttcaga 493 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 1084 gatgctgcagctaagaagtatgatttagaagcatggttccctgcatcaaaaacctacagg 1143 Query: 494 gaactagtatcctgttcaaattgcactgattatcaggcaaggagacttggaatagg 549 ||| |||| ||||| ||||||||||| |||| ||| |||||||||||||| ||||| Sbjct: 1144 gaattagtgtcctgctcaaattgcacagattttcaagcaaggagacttggtatagg 1199
>dbj|AK105730.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-H03, full insert sequence Length = 1771 Score = 563 bits (284), Expect = e-157 Identities = 473/536 (88%) Strand = Plus / Plus Query: 14 ccaatgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccagttggcc 73 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 707 ccaatgcaaactccttttttcatgagaaaggaaaccatgggaaaatgtgcccagttggcc 766 Query: 74 caatttgatgaggagctctacaaagtaacaggtgacggagaggataagtatctcatagca 133 |||||||| || ||||| ||||| ||||||| || |||||||| ||||||||||| || Sbjct: 767 caatttgacgaagagctttacaagctaacaggcgatggagaggaaaagtatctcatcgct 826 Query: 134 acatcggagcaaccgctatgtgcttatcatctaggtgatcgaatttatcctgcagatttg 193 ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 827 acatccgagcaaccgctgtgtgcgtatcatctaggtgatcgaatttatcctgctgaattg 886 Query: 194 ccgatcagatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagg 253 || || ||||||||||| | ||||| |||||||||||||||||||||||||| || ||| Sbjct: 887 ccaattagatatgctggatattccacctgcttccggaaagaagctggttcacatggaagg 946 Query: 254 gacacagctggcatcttcagagtccaccagtttgaaaagatcgagcagttctgtgccaca 313 ||||| ||||| ||||||||||||||||| || |||||||| ||||| ||||||| ||| Sbjct: 947 gacacggctggtatcttcagagtccaccaattcgaaaagattgagcaattctgtgttaca 1006 Query: 314 aatccaaatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagat 373 | |||||||||||| | ||||||||| |||||||| || ||||| |||||| |||||||| Sbjct: 1007 agtccaaatgacaatgaatcctgggagatgcatgaagaaatgataaaaaattcagaagat 1066 Query: 374 ttttatcaggcgattgggctaccatatcaactagtgtcgattgtctctggtgctcttaat 433 || || ||| |||||| ||||| || ||||| || || ||||| ||||||||||||||| Sbjct: 1067 ttctacaaggagattggcctaccgtaccaacttgtctccattgtgtctggtgctcttaat 1126 Query: 434 gatgctgcagctaagaagtatgatttggaagcatggttccctgcatcaaaaaccttcaga 493 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 1127 gatgctgcagctaagaagtatgatttagaagcatggttccctgcatcaaaaacctatagg 1186 Query: 494 gaactagtatcctgttcaaattgcactgattatcaggcaaggagacttggaatagg 549 ||| |||| ||||| ||||||||||| |||| ||| |||||||||||||| ||||| Sbjct: 1187 gaattagtgtcctgctcaaattgcacagattttcaagcaaggagacttggtatagg 1242
>dbj|AK069764.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026G18, full insert sequence Length = 1799 Score = 563 bits (284), Expect = e-157 Identities = 473/536 (88%) Strand = Plus / Plus Query: 14 ccaatgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccagttggcc 73 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 659 ccaatgcaaactccttttttcatgagaaaggaaaccatgggaaaatgtgcccagttggcc 718 Query: 74 caatttgatgaggagctctacaaagtaacaggtgacggagaggataagtatctcatagca 133 |||||||| || ||||| ||||| ||||||| || |||||||| ||||||||||| || Sbjct: 719 caatttgacgaagagctttacaagctaacaggcgatggagaggaaaagtatctcatcgct 778 Query: 134 acatcggagcaaccgctatgtgcttatcatctaggtgatcgaatttatcctgcagatttg 193 ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 779 acatccgagcaaccgctgtgtgcgtatcatctaggtgatcgaatttatcctgctgaattg 838 Query: 194 ccgatcagatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagg 253 || || ||||||||||| | ||||| |||||||||||||||||||||||||| || ||| Sbjct: 839 ccaattagatatgctggatattccacctgcttccggaaagaagctggttcacatggaagg 898 Query: 254 gacacagctggcatcttcagagtccaccagtttgaaaagatcgagcagttctgtgccaca 313 ||||| ||||| ||||||||||||||||| || |||||||| ||||| ||||||| ||| Sbjct: 899 gacacggctggtatcttcagagtccaccaattcgaaaagattgagcaattctgtgttaca 958 Query: 314 aatccaaatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagat 373 | |||||||||||| | ||||||||| |||||||| || ||||| |||||| |||||||| Sbjct: 959 agtccaaatgacaatgaatcctgggagatgcatgaagaaatgataaaaaattcagaagat 1018 Query: 374 ttttatcaggcgattgggctaccatatcaactagtgtcgattgtctctggtgctcttaat 433 || || ||| |||||| ||||| || ||||| || || ||||| ||||||||||||||| Sbjct: 1019 ttctacaaggagattggcctaccgtaccaacttgtctccattgtgtctggtgctcttaat 1078 Query: 434 gatgctgcagctaagaagtatgatttggaagcatggttccctgcatcaaaaaccttcaga 493 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 1079 gatgctgcagctaagaagtatgatttagaagcatggttccctgcatcaaaaacctatagg 1138 Query: 494 gaactagtatcctgttcaaattgcactgattatcaggcaaggagacttggaatagg 549 ||| |||| ||||| ||||||||||| |||| ||| |||||||||||||| ||||| Sbjct: 1139 gaattagtgtcctgctcaaattgcacagattttcaagcaaggagacttggtatagg 1194
>ref|NM_193493.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1335 Score = 535 bits (270), Expect = e-149 Identities = 470/536 (87%), Gaps = 3/536 (0%) Strand = Plus / Plus Query: 14 ccaatgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccagttggcc 73 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 583 ccaatgcaaactccttttttcatgagaaaggaaaccatgggaaaatgtgcccagttggcc 642 Query: 74 caatttgatgaggagctctacaaagtaacaggtgacggagaggataagtatctcatagca 133 |||||||| || ||||| ||||| | || | || |||||||| ||||||||||| || Sbjct: 643 caatttgacgaagagctttacaaggcaa---gcgatggagaggaaaagtatctcatcgct 699 Query: 134 acatcggagcaaccgctatgtgcttatcatctaggtgatcgaatttatcctgcagatttg 193 ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| || ||| Sbjct: 700 acatccgagcaaccgctgtgtgcgtatcatctaggtgatcgaatttatcctgctgaattg 759 Query: 194 ccgatcagatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagg 253 || || ||||||||||| | ||||| |||||||||||||||||||||||||| || ||| Sbjct: 760 ccaattagatatgctggatattccacctgcttccggaaagaagctggttcacatggaagg 819 Query: 254 gacacagctggcatcttcagagtccaccagtttgaaaagatcgagcagttctgtgccaca 313 ||||| ||||| ||||||||||||||||| || |||||||| ||||| ||||||| ||| Sbjct: 820 gacacggctggtatcttcagagtccaccaattcgaaaagattgagcaattctgtgttaca 879 Query: 314 aatccaaatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagat 373 | |||||||||||| | ||||||||| |||||||| || ||||| |||||| |||||||| Sbjct: 880 agtccaaatgacaatgaatcctgggagatgcatgaagaaatgataaaaaattcagaagat 939 Query: 374 ttttatcaggcgattgggctaccatatcaactagtgtcgattgtctctggtgctcttaat 433 || || ||| |||||| ||||| || ||||| || || ||||| ||||||||||||||| Sbjct: 940 ttctacaaggagattggcctaccgtaccaacttgtctccattgtgtctggtgctcttaat 999 Query: 434 gatgctgcagctaagaagtatgatttggaagcatggttccctgcatcaaaaaccttcaga 493 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 1000 gatgctgcagctaagaagtatgatttagaagcatggttccctgcatcaaaaacctatagg 1059 Query: 494 gaactagtatcctgttcaaattgcactgattatcaggcaaggagacttggaatagg 549 ||| |||| ||||| ||||||||||| |||| ||| |||||||||||||| ||||| Sbjct: 1060 gaattagtgtcctgctcaaattgcacagattttcaagcaaggagacttggtatagg 1115
>gb|BT017097.1| Zea mays clone EL01N0361G05.c mRNA sequence Length = 1308 Score = 490 bits (247), Expect = e-135 Identities = 466/539 (86%) Strand = Plus / Plus Query: 8 tttacaccaatgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccag 67 |||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 317 tttaaaccaatgcaaactccctttttcatgagaaaggaaactatggcaaaatgtgcccag 376 Query: 68 ttggcccaatttgatgaggagctctacaaagtaacaggtgacggagaggataagtatctc 127 |||||||| |||||||||||||| |||||||| |||||||| || || || || |||||| Sbjct: 377 ttggcccagtttgatgaggagctttacaaagttacaggtgatggtgaagacaaatatctc 436 Query: 128 atagcaacatcggagcaaccgctatgtgcttatcatctaggtgatcgaatttatcctgca 187 ||||| ||||| ||||| || ||||||||||||| |||||||| |||| || ||||| Sbjct: 437 atagctacatcagagcagcctttatgtgcttatcacttaggtgatagaatataccctgct 496 Query: 188 gatttgccgatcagatatgctgggttctccacgtgcttccggaaagaagctggttcacac 247 || | || |||| ||||||||||| |||||| ||||||||||| ||||||||||| || Sbjct: 497 gaacttccaatcaaatatgctgggtactccacatgcttccggaaggaagctggttcgcat 556 Query: 248 gggagggacacagctggcatcttcagagtccaccagtttgaaaagatcgagcagttctgt 307 || |||||||||||||| |||||||||||||||||||||||||| ||||| || ||||| Sbjct: 557 ggaagggacacagctggtatcttcagagtccaccagtttgaaaaaatcgaacaattctgc 616 Query: 308 gccacaaatccaaatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgca 367 |||| ||||||||||| | || ||||| |||||||| |||||| | ||||| || Sbjct: 617 attacaagcccaaatgacaatgattcttgggagatgcatgaagagatgctaaaaaactca 676 Query: 368 gaagatttttatcaggcgattgggctaccatatcaactagtgtcgattgtctctggtgct 427 ||||||| ||| ||| ||||||||||||||| ||| | || || ||||||||||||||| Sbjct: 677 gaagattactataaggagattgggctaccataccaagttgtttccattgtctctggtgct 736 Query: 428 cttaatgatgctgcagctaagaagtatgatttggaagcatggttccctgcatcaaaaacc 487 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 737 cttaatgatgctgctgctaagaaatatgatttggaagcatggttccctgcatcaaagacc 796 Query: 488 ttcagagaactagtatcctgttcaaattgcactgattatcaggcaaggagacttggaat 546 ||| |||| |||||||||||||||| |||||||| | |||| |||||||||||||||| Sbjct: 797 ttccgagagttagtatcctgttcaaactgcactgactttcagtcaaggagacttggaat 855
>gb|AY103609.1| Zea mays PCO093348 mRNA sequence Length = 1932 Score = 490 bits (247), Expect = e-135 Identities = 466/539 (86%) Strand = Plus / Plus Query: 8 tttacaccaatgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccag 67 |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 654 tttaaaccaatgcaaactccttttttcatgagaaaggaaactatggcaaaatgtgcccag 713 Query: 68 ttggcccaatttgatgaggagctctacaaagtaacaggtgacggagaggataagtatctc 127 |||||||| |||||||||||||| |||||||| |||||||| || ||||| || |||||| Sbjct: 714 ttggcccagtttgatgaggagctttacaaagttacaggtgatggcgaggacaaatatctc 773 Query: 128 atagcaacatcggagcaaccgctatgtgcttatcatctaggtgatcgaatttatcctgca 187 ||||| ||||| ||||| || ||||||||||||| ||||||||||||| || ||||| Sbjct: 774 atagctacatcagagcagcctttatgtgcttatcacttaggtgatcgaatctaccctgct 833 Query: 188 gatttgccgatcagatatgctgggttctccacgtgcttccggaaagaagctggttcacac 247 || | || |||| ||||||||||| |||||| ||||||||||| ||||||||||| || Sbjct: 834 gaacttccaatcaaatatgctgggtactccacatgcttccggaaggaagctggttctcat 893 Query: 248 gggagggacacagctggcatcttcagagtccaccagtttgaaaagatcgagcagttctgt 307 || |||||||||||||| |||||||||||||||||||||||||| || || || ||||| Sbjct: 894 ggaagggacacagctggtatcttcagagtccaccagtttgaaaaaattgaacaattctgc 953 Query: 308 gccacaaatccaaatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgca 367 |||| ||||||| ||| | |||||||| || ||||| |||||| | |||||| || Sbjct: 954 attacaagcccaaatggcaatgattcctgggagatccatgaagagatgctaaaaaattca 1013 Query: 368 gaagatttttatcaggcgattgggctaccatatcaactagtgtcgattgtctctggtgct 427 |||||||| || ||| ||||||||||||||| ||| | || || |||||||| |||||| Sbjct: 1014 gaagatttctacaaggagattgggctaccataccaagttgtttccattgtctccggtgct 1073 Query: 428 cttaatgatgctgcagctaagaagtatgatttggaagcatggttccctgcatcaaaaacc 487 ||||| |||||||| |||||||| || ||||||||||||||||||||||||||||| ||| Sbjct: 1074 cttaacgatgctgctgctaagaaatacgatttggaagcatggttccctgcatcaaagacc 1133 Query: 488 ttcagagaactagtatcctgttcaaattgcactgattatcaggcaaggagacttggaat 546 ||| |||| ||||||||||||||||||||||||| | |||| |||||||||||||||| Sbjct: 1134 ttccgagagttagtatcctgttcaaattgcactgactttcagtcaaggagacttggaat 1192
>emb|AJ007665.1|ZMA7665 Zea mays mRNA for cytosolic seryl-tRNA synthetase Length = 1907 Score = 444 bits (224), Expect = e-121 Identities = 463/540 (85%), Gaps = 2/540 (0%) Strand = Plus / Plus Query: 8 tttacaccaatgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccag 67 |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 628 tttaaaccaatgcaaactccttttttcatgagaaaggaaactatggcaaaatgtgcccag 687 Query: 68 ttggcccaatttgatgaggagctctacaaagtaacaggtgacggagaggataagtatctc 127 |||||||| |||||||||||||| ||||| || |||||||| || ||||| || |||||| Sbjct: 688 ttggcccagtttgatgaggagctttacaaggttacaggtgatggcgaggacaaatatctc 747 Query: 128 atagcaacatcggagcaaccgctatgtgcttatcatctaggtgatcgaatttatcctgca 187 ||||| ||||| ||||| || ||||||||||||| ||||||||||||| || ||||| Sbjct: 748 atagctacatcagagcagcctttatgtgcttatcacttaggtgatcgaatctaccctgct 807 Query: 188 gatttgccgatcagatatgctgggttctccacgtgcttccggaaagaagctggttcacac 247 || | || |||| ||||||||||| |||||| ||||||||||| ||||||||||| || Sbjct: 808 gaacttccaatcaaatatgctgggtactccacatgcttccggaaggaagctggttctcat 867 Query: 248 gggagggacacagctggcatcttcagagtccaccagtttgaaaagatcgagcagttctgt 307 || |||||||||||||| |||||||||||||||||||||||||| || || || ||||| Sbjct: 868 ggaagggacacagctggtatcttcagagtccaccagtttgaaaaaattgaacaattctgc 927 Query: 308 gccacaaatccaaatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgca 367 |||| ||||||| ||| | |||||||| || ||||| |||||| | |||||| || Sbjct: 928 attacaagcccaaatggcaatgattcctgggagatccatgaagagatgctaaaaaattca 987 Query: 368 gaagatttttatcaggcgattgggctaccatatcaactagtgtcgattgtctctggtgct 427 |||||||| || ||| ||||||||||||||| ||| | || || |||||||| || ||| Sbjct: 988 gaagatttctacaaggagattgggctaccataccaagttgtttccattgtctccggcgct 1047 Query: 428 cttaatgatgctgcagctaagaagtatgatttggaagcatggttccctgcatcaaaaacc 487 ||||| |||||||| |||||||| || ||||||||||||||||||||||||||||| ||| Sbjct: 1048 cttaacgatgctgctgctaagaaatacgatttggaagcatggttccctgcatcaaagacc 1107 Query: 488 ttcagagaactagtatcctgttcaaattgcactgattatcaggc-aaggagacttggaat 546 ||| |||| |||||||||||||||| |||||||| | |||| | ||||||||||||||| Sbjct: 1108 ttccgagagttagtatcctgttcaaactgcactgact-tcagtcaaaggagacttggaat 1166
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 192 bits (97), Expect = 8e-46 Identities = 148/165 (89%) Strand = Plus / Plus Query: 385 gattgggctaccatatcaactagtgtcgattgtctctggtgctcttaatgatgctgcagc 444 |||||| ||||| |||||||| || || || || |||||||||||||||||||||||||| Sbjct: 5138086 gattggcctaccgtatcaacttgtctccatcgtgtctggtgctcttaatgatgctgcagc 5138145 Query: 445 taagaagtatgatttggaagcatggttccctgcatcaaaaaccttcagagaactagtatc 504 ||||||||||||||| |||||||||||||||||||||||||||| ||| ||| |||| || Sbjct: 5138146 taagaagtatgatttagaagcatggttccctgcatcaaaaacctacagggaattagtgtc 5138205 Query: 505 ctgttcaaattgcactgattatcaggcaaggagacttggaatagg 549 ||| ||||||||||| |||| ||| |||||||||||||| ||||| Sbjct: 5138206 ctgctcaaattgcacagattttcaagcaaggagacttggtatagg 5138250 Score = 190 bits (96), Expect = 3e-45 Identities = 156/176 (88%) Strand = Plus / Plus Query: 200 agatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagggacaca 259 ||||||||||| | ||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 5137808 agatatgctggatattccacctgtttccggaaagaagctggttcacatgggagggacacg 5137867 Query: 260 gctggcatcttcagagtccaccagtttgaaaagatcgagcagttctgtgccacaaatcca 319 ||||| ||||||||||||||||| |||||||||||||| || ||||||| ||||| |||| Sbjct: 5137868 gctggtatcttcagagtccaccaatttgaaaagatcgaacaattctgtgtcacaagtcca 5137927 Query: 320 aatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagattt 375 |||||||| | ||| ||||| |||||||| || |||||||||||| |||||||||| Sbjct: 5137928 aatgacaatgaatcttgggagatgcatgaagaaatgattaaaaattcagaagattt 5137983 Score = 117 bits (59), Expect = 4e-23 Identities = 77/83 (92%) Strand = Plus / Plus Query: 14 ccaatgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccagttggcc 73 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 5137278 ccaatgcaaactccttttttcatgagaaaggaaaccatgggaaaatgtgcccagttggcc 5137337 Query: 74 caatttgatgaggagctctacaa 96 ||||| || || ||||| ||||| Sbjct: 5137338 caattcgacgaagagctttacaa 5137360 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 99 taacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctt 158 ||||||| || |||||||| |||||||||||||| ||||| ||||||||| | ||||| | Sbjct: 5137627 taacaggcgatggagaggaaaagtatctcatagctacatctgagcaaccgttgtgtgcgt 5137686 Query: 159 atcatctaggtgatcgaatttatcctgcagatttgcc 195 ||||||| |||||||||||||||||||| || ||||| Sbjct: 5137687 atcatcttggtgatcgaatttatcctgctgaattgcc 5137723
>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0058P18, from chromosome 3, complete sequence Length = 155037 Score = 192 bits (97), Expect = 8e-46 Identities = 148/165 (89%) Strand = Plus / Minus Query: 385 gattgggctaccatatcaactagtgtcgattgtctctggtgctcttaatgatgctgcagc 444 |||||| ||||| |||||||| || || || || |||||||||||||||||||||||||| Sbjct: 31619 gattggcctaccgtatcaacttgtctccatcgtgtctggtgctcttaatgatgctgcagc 31560 Query: 445 taagaagtatgatttggaagcatggttccctgcatcaaaaaccttcagagaactagtatc 504 ||||||||||||||| |||||||||||||||||||||||||||| ||| ||| |||| || Sbjct: 31559 taagaagtatgatttagaagcatggttccctgcatcaaaaacctacagggaattagtgtc 31500 Query: 505 ctgttcaaattgcactgattatcaggcaaggagacttggaatagg 549 ||| ||||||||||| |||| ||| |||||||||||||| ||||| Sbjct: 31499 ctgctcaaattgcacagattttcaagcaaggagacttggtatagg 31455 Score = 190 bits (96), Expect = 3e-45 Identities = 156/176 (88%) Strand = Plus / Minus Query: 200 agatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagggacaca 259 ||||||||||| | ||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 31897 agatatgctggatattccacctgtttccggaaagaagctggttcacatgggagggacacg 31838 Query: 260 gctggcatcttcagagtccaccagtttgaaaagatcgagcagttctgtgccacaaatcca 319 ||||| ||||||||||||||||| |||||||||||||| || ||||||| ||||| |||| Sbjct: 31837 gctggtatcttcagagtccaccaatttgaaaagatcgaacaattctgtgtcacaagtcca 31778 Query: 320 aatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagattt 375 |||||||| | ||| ||||| |||||||| || |||||||||||| |||||||||| Sbjct: 31777 aatgacaatgaatcttgggagatgcatgaagaaatgattaaaaattcagaagattt 31722 Score = 117 bits (59), Expect = 4e-23 Identities = 77/83 (92%) Strand = Plus / Minus Query: 14 ccaatgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccagttggcc 73 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 32427 ccaatgcaaactccttttttcatgagaaaggaaaccatgggaaaatgtgcccagttggcc 32368 Query: 74 caatttgatgaggagctctacaa 96 ||||| || || ||||| ||||| Sbjct: 32367 caattcgacgaagagctttacaa 32345 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 99 taacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctt 158 ||||||| || |||||||| |||||||||||||| ||||| ||||||||| | ||||| | Sbjct: 32078 taacaggcgatggagaggaaaagtatctcatagctacatctgagcaaccgttgtgtgcgt 32019 Query: 159 atcatctaggtgatcgaatttatcctgcagatttgcc 195 ||||||| |||||||||||||||||||| || ||||| Sbjct: 32018 atcatcttggtgatcgaatttatcctgctgaattgcc 31982
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 192 bits (97), Expect = 8e-46 Identities = 148/165 (89%) Strand = Plus / Minus Query: 385 gattgggctaccatatcaactagtgtcgattgtctctggtgctcttaatgatgctgcagc 444 |||||| ||||| |||||||| || || || || |||||||||||||||||||||||||| Sbjct: 118432 gattggcctaccgtatcaacttgtctccatcgtgtctggtgctcttaatgatgctgcagc 118373 Query: 445 taagaagtatgatttggaagcatggttccctgcatcaaaaaccttcagagaactagtatc 504 ||||||||||||||| |||||||||||||||||||||||||||| ||| ||| |||| || Sbjct: 118372 taagaagtatgatttagaagcatggttccctgcatcaaaaacctacagggaattagtgtc 118313 Query: 505 ctgttcaaattgcactgattatcaggcaaggagacttggaatagg 549 ||| ||||||||||| |||| ||| |||||||||||||| ||||| Sbjct: 118312 ctgctcaaattgcacagattttcaagcaaggagacttggtatagg 118268 Score = 190 bits (96), Expect = 3e-45 Identities = 156/176 (88%) Strand = Plus / Minus Query: 200 agatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagggacaca 259 ||||||||||| | ||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 118710 agatatgctggatattccacctgtttccggaaagaagctggttcacatgggagggacacg 118651 Query: 260 gctggcatcttcagagtccaccagtttgaaaagatcgagcagttctgtgccacaaatcca 319 ||||| ||||||||||||||||| |||||||||||||| || ||||||| ||||| |||| Sbjct: 118650 gctggtatcttcagagtccaccaatttgaaaagatcgaacaattctgtgtcacaagtcca 118591 Query: 320 aatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagattt 375 |||||||| | ||| ||||| |||||||| || |||||||||||| |||||||||| Sbjct: 118590 aatgacaatgaatcttgggagatgcatgaagaaatgattaaaaattcagaagattt 118535 Score = 117 bits (59), Expect = 4e-23 Identities = 77/83 (92%) Strand = Plus / Minus Query: 14 ccaatgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccagttggcc 73 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 119240 ccaatgcaaactccttttttcatgagaaaggaaaccatgggaaaatgtgcccagttggcc 119181 Query: 74 caatttgatgaggagctctacaa 96 ||||| || || ||||| ||||| Sbjct: 119180 caattcgacgaagagctttacaa 119158 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 99 taacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctt 158 ||||||| || |||||||| |||||||||||||| ||||| ||||||||| | ||||| | Sbjct: 118891 taacaggcgatggagaggaaaagtatctcatagctacatctgagcaaccgttgtgtgcgt 118832 Query: 159 atcatctaggtgatcgaatttatcctgcagatttgcc 195 ||||||| |||||||||||||||||||| || ||||| Sbjct: 118831 atcatcttggtgatcgaatttatcctgctgaattgcc 118795
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 192 bits (97), Expect = 8e-46 Identities = 148/165 (89%) Strand = Plus / Plus Query: 385 gattgggctaccatatcaactagtgtcgattgtctctggtgctcttaatgatgctgcagc 444 |||||| ||||| |||||||| || || || || |||||||||||||||||||||||||| Sbjct: 5137303 gattggcctaccgtatcaacttgtctccatcgtgtctggtgctcttaatgatgctgcagc 5137362 Query: 445 taagaagtatgatttggaagcatggttccctgcatcaaaaaccttcagagaactagtatc 504 ||||||||||||||| |||||||||||||||||||||||||||| ||| ||| |||| || Sbjct: 5137363 taagaagtatgatttagaagcatggttccctgcatcaaaaacctacagggaattagtgtc 5137422 Query: 505 ctgttcaaattgcactgattatcaggcaaggagacttggaatagg 549 ||| ||||||||||| |||| ||| |||||||||||||| ||||| Sbjct: 5137423 ctgctcaaattgcacagattttcaagcaaggagacttggtatagg 5137467 Score = 190 bits (96), Expect = 3e-45 Identities = 156/176 (88%) Strand = Plus / Plus Query: 200 agatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagggacaca 259 ||||||||||| | ||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 5137025 agatatgctggatattccacctgtttccggaaagaagctggttcacatgggagggacacg 5137084 Query: 260 gctggcatcttcagagtccaccagtttgaaaagatcgagcagttctgtgccacaaatcca 319 ||||| ||||||||||||||||| |||||||||||||| || ||||||| ||||| |||| Sbjct: 5137085 gctggtatcttcagagtccaccaatttgaaaagatcgaacaattctgtgtcacaagtcca 5137144 Query: 320 aatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagattt 375 |||||||| | ||| ||||| |||||||| || |||||||||||| |||||||||| Sbjct: 5137145 aatgacaatgaatcttgggagatgcatgaagaaatgattaaaaattcagaagattt 5137200 Score = 117 bits (59), Expect = 4e-23 Identities = 77/83 (92%) Strand = Plus / Plus Query: 14 ccaatgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccagttggcc 73 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 5136495 ccaatgcaaactccttttttcatgagaaaggaaaccatgggaaaatgtgcccagttggcc 5136554 Query: 74 caatttgatgaggagctctacaa 96 ||||| || || ||||| ||||| Sbjct: 5136555 caattcgacgaagagctttacaa 5136577 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 99 taacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctt 158 ||||||| || |||||||| |||||||||||||| ||||| ||||||||| | ||||| | Sbjct: 5136844 taacaggcgatggagaggaaaagtatctcatagctacatctgagcaaccgttgtgtgcgt 5136903 Query: 159 atcatctaggtgatcgaatttatcctgcagatttgcc 195 ||||||| |||||||||||||||||||| || ||||| Sbjct: 5136904 atcatcttggtgatcgaatttatcctgctgaattgcc 5136940
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 184 bits (93), Expect = 2e-43 Identities = 147/165 (89%) Strand = Plus / Plus Query: 385 gattgggctaccatatcaactagtgtcgattgtctctggtgctcttaatgatgctgcagc 444 |||||| ||||| || ||||| || || ||||| |||||||||||||||||||||||||| Sbjct: 21175144 gattggcctaccgtaccaacttgtctccattgtgtctggtgctcttaatgatgctgcagc 21175203 Query: 445 taagaagtatgatttggaagcatggttccctgcatcaaaaaccttcagagaactagtatc 504 ||||||||||||||| |||||||||||||||||||||||||||| || ||| |||| || Sbjct: 21175204 taagaagtatgatttagaagcatggttccctgcatcaaaaacctatagggaattagtgtc 21175263 Query: 505 ctgttcaaattgcactgattatcaggcaaggagacttggaatagg 549 ||| ||||||||||| |||| ||| |||||||||||||| ||||| Sbjct: 21175264 ctgctcaaattgcacagattttcaagcaaggagacttggtatagg 21175308 Score = 174 bits (88), Expect = 2e-40 Identities = 154/176 (87%) Strand = Plus / Plus Query: 200 agatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagggacaca 259 ||||||||||| | ||||| |||||||||||||||||||||||||| || |||||||| Sbjct: 21174866 agatatgctggatattccacctgcttccggaaagaagctggttcacatggaagggacacg 21174925 Query: 260 gctggcatcttcagagtccaccagtttgaaaagatcgagcagttctgtgccacaaatcca 319 ||||| ||||||||||||||||| || |||||||| ||||| ||||||| |||| |||| Sbjct: 21174926 gctggtatcttcagagtccaccaattcgaaaagattgagcaattctgtgttacaagtcca 21174985 Query: 320 aatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagattt 375 |||||||| | ||||||||| |||||||| || ||||| |||||| |||||||||| Sbjct: 21174986 aatgacaatgaatcctgggagatgcatgaagaaatgataaaaaattcagaagattt 21175041 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 14 ccaatgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccagttggcc 73 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 21174352 ccaatgcaaactccttttttcatgagaaaggaaaccatgggaaaatgtgcccagttggcc 21174411 Query: 74 caatttgatgaggagctctacaa 96 |||||||| || ||||| ||||| Sbjct: 21174412 caatttgacgaagagctttacaa 21174434 Score = 113 bits (57), Expect = 6e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 99 taacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctt 158 ||||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||| | Sbjct: 21174688 taacaggcgatggagaggaaaagtatctcatcgctacatccgagcaaccgctgtgtgcgt 21174747 Query: 159 atcatctaggtgatcgaatttatcctgcagatttgcc 195 |||||||||||||||||||||||||||| || ||||| Sbjct: 21174748 atcatctaggtgatcgaatttatcctgctgaattgcc 21174784
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 184 bits (93), Expect = 2e-43 Identities = 147/165 (89%) Strand = Plus / Plus Query: 385 gattgggctaccatatcaactagtgtcgattgtctctggtgctcttaatgatgctgcagc 444 |||||| ||||| || ||||| || || ||||| |||||||||||||||||||||||||| Sbjct: 142689 gattggcctaccgtaccaacttgtctccattgtgtctggtgctcttaatgatgctgcagc 142748 Query: 445 taagaagtatgatttggaagcatggttccctgcatcaaaaaccttcagagaactagtatc 504 ||||||||||||||| |||||||||||||||||||||||||||| || ||| |||| || Sbjct: 142749 taagaagtatgatttagaagcatggttccctgcatcaaaaacctatagggaattagtgtc 142808 Query: 505 ctgttcaaattgcactgattatcaggcaaggagacttggaatagg 549 ||| ||||||||||| |||| ||| |||||||||||||| ||||| Sbjct: 142809 ctgctcaaattgcacagattttcaagcaaggagacttggtatagg 142853 Score = 174 bits (88), Expect = 2e-40 Identities = 154/176 (87%) Strand = Plus / Plus Query: 200 agatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagggacaca 259 ||||||||||| | ||||| |||||||||||||||||||||||||| || |||||||| Sbjct: 142411 agatatgctggatattccacctgcttccggaaagaagctggttcacatggaagggacacg 142470 Query: 260 gctggcatcttcagagtccaccagtttgaaaagatcgagcagttctgtgccacaaatcca 319 ||||| ||||||||||||||||| || |||||||| ||||| ||||||| |||| |||| Sbjct: 142471 gctggtatcttcagagtccaccaattcgaaaagattgagcaattctgtgttacaagtcca 142530 Query: 320 aatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagattt 375 |||||||| | ||||||||| |||||||| || ||||| |||||| |||||||||| Sbjct: 142531 aatgacaatgaatcctgggagatgcatgaagaaatgataaaaaattcagaagattt 142586 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 14 ccaatgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccagttggcc 73 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 141897 ccaatgcaaactccttttttcatgagaaaggaaaccatgggaaaatgtgcccagttggcc 141956 Query: 74 caatttgatgaggagctctacaa 96 |||||||| || ||||| ||||| Sbjct: 141957 caatttgacgaagagctttacaa 141979 Score = 113 bits (57), Expect = 6e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 99 taacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctt 158 ||||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||| | Sbjct: 142233 taacaggcgatggagaggaaaagtatctcatcgctacatccgagcaaccgctgtgtgcgt 142292 Query: 159 atcatctaggtgatcgaatttatcctgcagatttgcc 195 |||||||||||||||||||||||||||| || ||||| Sbjct: 142293 atcatctaggtgatcgaatttatcctgctgaattgcc 142329
>dbj|AP003924.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1064G04 Length = 186704 Score = 184 bits (93), Expect = 2e-43 Identities = 147/165 (89%) Strand = Plus / Plus Query: 385 gattgggctaccatatcaactagtgtcgattgtctctggtgctcttaatgatgctgcagc 444 |||||| ||||| || ||||| || || ||||| |||||||||||||||||||||||||| Sbjct: 72653 gattggcctaccgtaccaacttgtctccattgtgtctggtgctcttaatgatgctgcagc 72712 Query: 445 taagaagtatgatttggaagcatggttccctgcatcaaaaaccttcagagaactagtatc 504 ||||||||||||||| |||||||||||||||||||||||||||| || ||| |||| || Sbjct: 72713 taagaagtatgatttagaagcatggttccctgcatcaaaaacctatagggaattagtgtc 72772 Query: 505 ctgttcaaattgcactgattatcaggcaaggagacttggaatagg 549 ||| ||||||||||| |||| ||| |||||||||||||| ||||| Sbjct: 72773 ctgctcaaattgcacagattttcaagcaaggagacttggtatagg 72817 Score = 174 bits (88), Expect = 2e-40 Identities = 154/176 (87%) Strand = Plus / Plus Query: 200 agatatgctgggttctccacgtgcttccggaaagaagctggttcacacgggagggacaca 259 ||||||||||| | ||||| |||||||||||||||||||||||||| || |||||||| Sbjct: 72375 agatatgctggatattccacctgcttccggaaagaagctggttcacatggaagggacacg 72434 Query: 260 gctggcatcttcagagtccaccagtttgaaaagatcgagcagttctgtgccacaaatcca 319 ||||| ||||||||||||||||| || |||||||| ||||| ||||||| |||| |||| Sbjct: 72435 gctggtatcttcagagtccaccaattcgaaaagattgagcaattctgtgttacaagtcca 72494 Query: 320 aatgacaacgtatcctgggaaatgcatgaggagatgattaaaaatgcagaagattt 375 |||||||| | ||||||||| |||||||| || ||||| |||||| |||||||||| Sbjct: 72495 aatgacaatgaatcctgggagatgcatgaagaaatgataaaaaattcagaagattt 72550 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Plus Query: 14 ccaatgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccagttggcc 73 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 71861 ccaatgcaaactccttttttcatgagaaaggaaaccatgggaaaatgtgcccagttggcc 71920 Query: 74 caatttgatgaggagctctacaa 96 |||||||| || ||||| ||||| Sbjct: 71921 caatttgacgaagagctttacaa 71943 Score = 113 bits (57), Expect = 6e-22 Identities = 87/97 (89%) Strand = Plus / Plus Query: 99 taacaggtgacggagaggataagtatctcatagcaacatcggagcaaccgctatgtgctt 158 ||||||| || |||||||| ||||||||||| || ||||| ||||||||||| ||||| | Sbjct: 72197 taacaggcgatggagaggaaaagtatctcatcgctacatccgagcaaccgctgtgtgcgt 72256 Query: 159 atcatctaggtgatcgaatttatcctgcagatttgcc 195 |||||||||||||||||||||||||||| || ||||| Sbjct: 72257 atcatctaggtgatcgaatttatcctgctgaattgcc 72293
>emb|Z98761.1|HASERTS Helianthus annuus mRNA for seryl-tRNA synthetase Length = 1620 Score = 117 bits (59), Expect = 4e-23 Identities = 158/191 (82%) Strand = Plus / Plus Query: 335 tgggaaatgcatgaggagatgattaaaaatgcagaagatttttatcaggcgattgggcta 394 |||||||||||||| ||||||||||||||| | || || ||||||||| | | | Sbjct: 1013 tgggaaatgcatgaagagatgattaaaaattctgaggagttttatcagatgttgaaattg 1072 Query: 395 ccatatcaactagtgtcgattgtctctggtgctcttaatgatgctgcagctaagaagtat 454 || |||||| ||||||| || || |||||||| || || ||||||||||| ||||||||| Sbjct: 1073 ccgtatcaagtagtgtctatagtttctggtgcgctaaacgatgctgcagcaaagaagtat 1132 Query: 455 gatttggaagcatggttccctgcatcaaaaaccttcagagaactagtatcctgttcaaat 514 || |||||||||||||| |||||||| ||||| | ||||||||| || || ||||| ||| Sbjct: 1133 gacttggaagcatggtttcctgcatccaaaacttacagagaacttgtttcatgttctaat 1192 Query: 515 tgcactgatta 525 ||||| ||||| Sbjct: 1193 tgcacagatta 1203 Score = 85.7 bits (43), Expect = 1e-13 Identities = 103/123 (83%) Strand = Plus / Plus Query: 50 atggcaaaatgtgcccagttggcccaatttgatgaggagctctacaaagtaacaggtgac 109 |||| ||||||||| ||||| || ||||||||||| || || ||||| ||||||||||| Sbjct: 728 atgggaaaatgtgctcagttagcacaatttgatgaagaactttacaaggtaacaggtgag 787 Query: 110 ggagaggataagtatctcatagcaacatcggagcaaccgctatgtgcttatcatctaggt 169 ||||| || |||||||| || ||||| | || ||||||||||||||||| ||| ||| | Sbjct: 788 ggagatgacaagtatctgattgcaactgctgaacaaccgctatgtgcttaccatatagat 847 Query: 170 gat 172 ||| Sbjct: 848 gat 850 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 219 cgtgcttccggaaagaagctggttcacacgggagggacac 258 ||||||| || || |||||||| ||||||||||| ||||| Sbjct: 897 cgtgctttcgtaaggaagctggctcacacgggagagacac 936
>emb|Z97210.2|SPAC29A4 S.pombe chromosome I cosmid c29A4 Length = 44082 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 413 attgtctctggtgctcttaatgatgctgcagctaagaagtatgatttggaagcatggttc 472 ||||| ||||||||| | || ||||||| || |||||||||||||||||||| |||||| Sbjct: 14931 attgtttctggtgctttgaacaatgctgctgccaagaagtatgatttggaagcttggttc 14872 Query: 473 cct 475 ||| Sbjct: 14871 cct 14869
>ref|NM_001020296.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC29A4.15), partial mRNA Length = 1353 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 413 attgtctctggtgctcttaatgatgctgcagctaagaagtatgatttggaagcatggttc 472 ||||| ||||||||| | || ||||||| || |||||||||||||||||||| |||||| Sbjct: 991 attgtttctggtgctttgaacaatgctgctgccaagaagtatgatttggaagcttggttc 1050 Query: 473 cct 475 ||| Sbjct: 1051 cct 1053
>ref|XM_504912.1| Yarrowia lipolytica CLIB122, YALI0F02629g predicted mRNA Length = 1362 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 266 atcttcagagtccaccagtttgaaaagatcgagcagttctg 306 |||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 850 atcttccgagtccaccagtttgagaagattgagcagttctg 890
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 266 atcttcagagtccaccagtttgaaaagatcgagcagttctg 306 |||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 390011 atcttccgagtccaccagtttgagaagattgagcagttctg 389971
>ref|XM_788449.1| PREDICTED: Strongylocentrotus purpuratus similar to seryl-aminoacyl-tRNA synthetase 1 (LOC588782), mRNA Length = 1676 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 263 ggcatcttcagagtccaccagtttgaaaagatcgagcagttctg 306 |||||||| ||||| || |||||||||||||| ||||||||||| Sbjct: 1044 ggcatctttagagttcatcagtttgaaaagattgagcagttctg 1087
>ref|NM_001031392.1| Gallus gallus seryl-tRNA synthetase (SARS), mRNA Length = 1883 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 263 ggcatcttcagagtccaccagtttgaaaagatcgagcagttc 304 ||||||||| | || ||||||||||| ||||||||||||||| Sbjct: 1011 ggcatcttccgtgtgcaccagtttgagaagatcgagcagttc 1052
>emb|AJ719509.1| Gallus gallus mRNA for hypothetical protein, clone 2o24 Length = 1883 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 263 ggcatcttcagagtccaccagtttgaaaagatcgagcagttc 304 ||||||||| | || ||||||||||| ||||||||||||||| Sbjct: 1011 ggcatcttccgtgtgcaccagtttgagaagatcgagcagttc 1052
>ref|XM_715006.1| Candida albicans SC5314 putative serine tRNA synthetase (CaO19_7901), mRNA Length = 1389 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 435 atgctgcagctaagaagtatgatttggaagcatggttccc 474 ||||||| |||||||| || ||||||||||| |||||||| Sbjct: 1037 atgctgctgctaagaaatacgatttggaagcttggttccc 1076
>ref|XM_714874.1| Candida albicans SC5314 putative serine tRNA synthetase (CaO19_269), mRNA Length = 1377 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 435 atgctgcagctaagaagtatgatttggaagcatggttccc 474 ||||||| |||||||| || ||||||||||| |||||||| Sbjct: 1025 atgctgctgctaagaaatacgatttggaagcttggttccc 1064
>gb|AF290915.1|AF290915 Candida albicans seryl-tRNA synthetase (SES1) gene, complete cds Length = 3098 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 435 atgctgcagctaagaagtatgatttggaagcatggttccc 474 ||||||| |||||||| || ||||||||||| |||||||| Sbjct: 1489 atgctgctgctaagaaatacgatttggaagcttggttccc 1528
>ref|NM_208212.1| Eremothecium gossypii ABL088Cp (ABL088C), mRNA Length = 1380 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 435 atgctgcagctaagaagtatgatttggaagcatggttccc 474 ||||||| ||||| ||||| ||||||||||| |||||||| Sbjct: 1037 atgctgctgctaaaaagtacgatttggaagcttggttccc 1076
>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II, complete sequence Length = 867699 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Minus Query: 435 atgctgcagctaagaagtatgatttggaagcatggttccc 474 ||||||| ||||| ||||| ||||||||||| |||||||| Sbjct: 234399 atgctgctgctaaaaagtacgatttggaagcttggttccc 234360
>ref|XM_806881.1| Trypanosoma cruzi strain CL Brener seryl-tRNA synthetase (Tc00.1047053506777.80) partial mRNA Length = 1434 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 74 caatttgatgaggagctctacaaagtaacaggtgacggagaggataagtat 124 ||||| |||||||| | ||||||||||| |||||||| ||||| |||||| Sbjct: 730 caattcgatgaggaattgtacaaagtaacgggtgacggtgaggaaaagtat 780
>ref|XM_661530.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.80542) partial mRNA Length = 1365 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 428 cttaatgatgctgcagctaagaagtatgatttggaagcatggttccc 474 ||||| || |||||| | |||||||||||||| ||||| |||||||| Sbjct: 1036 cttaacgacgctgcatcgaagaagtatgatttagaagcttggttccc 1082
>ref|XM_627356.1| Cryptosporidium parvum Iowa II seryl-tRNA synthetase, cytoplasmic (cgd8_4720), partial mRNA Length = 1365 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 428 cttaatgatgctgcagctaagaagtatgatttggaagcatggttccc 474 |||||||| |||||| | || ||||||||||| ||||| |||||||| Sbjct: 1036 cttaatgacgctgcatcgaaaaagtatgatttagaagcttggttccc 1082
>emb|AL590444.1|CNS07EGB chromosome IV of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 218329 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 269 ttcagagtccaccagtttgaaaagatcgagcagtt 303 ||||| |||||||||||||| ||||| |||||||| Sbjct: 93768 ttcagggtccaccagtttgagaagattgagcagtt 93734
>ref|NM_122629.2| Arabidopsis thaliana ATP binding / serine-tRNA ligase/ tRNA ligase AT5G27470 mRNA, complete cds Length = 1670 Score = 44.1 bits (22), Expect = 0.48 Identities = 94/118 (79%) Strand = Plus / Plus Query: 18 tgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccagttggcccaat 77 ||||| |||||||||||||||| ||||| | ||||| || || || || ||||| || | Sbjct: 675 tgcaacctccttttttcatgaggaaggatgttatggccaagtgcgcacaattggcacagt 734 Query: 78 ttgatgaggagctctacaaagtaacaggtgacggagaggataagtatctcatagcaac 135 | ||||| ||||| ||||| || || ||||| ||||| || || || ||||| ||||| Sbjct: 735 tcgatgaagagctttacaaggtgactggtgaaggagatgacaaatacctcattgcaac 792
>ref|XM_677044.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8867.2), mRNA Length = 1425 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 74 caatttgatgaggagctctacaaagt 99 |||||||||||||| ||||||||||| Sbjct: 652 caatttgatgaggaactctacaaagt 677
>ref|XM_823696.1| Trypanosoma brucei TREU927 seryl-tRNA synthetase (Tb11.02.5020) partial mRNA Length = 1440 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 440 gcagctaagaagtatgatttggaagcatggttccctgc 477 ||||| |||||||| |||||||| || ||||||||||| Sbjct: 1096 gcagcaaagaagtacgatttggaggcttggttccctgc 1133
>ref|XM_384378.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04202.1) partial mRNA Length = 1416 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 437 gctgcagctaagaagtatgatttggaagcatggttccc 474 ||||| || |||||||| ||||||||||| |||||||| Sbjct: 1021 gctgctgccaagaagtacgatttggaagcgtggttccc 1058
>ref|XM_645587.1| Entamoeba histolytica HM-1:IMSS seryl-tRNA synthetase (204.t00006) partial mRNA Length = 1362 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 335 tgggaaatgcatgaggagatgattaaaaat 364 |||||||||||||| || |||||||||||| Sbjct: 916 tgggaaatgcatgaagaaatgattaaaaat 945
>emb|CR692421.1|CNS0FX81 Tetraodon nigroviridis full-length cDNA Length = 1758 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 263 ggcatcttcagagtccaccagtttgaaaagatcgagcagttc 304 ||||||||||| || |||||||| || ||||| ||||||||| Sbjct: 963 ggcatcttcagggtgcaccagttcgagaagattgagcagttc 1004
>emb|CR645175.2|CNS0EWSD Tetraodon nigroviridis full-length cDNA Length = 1232 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 263 ggcatcttcagagtccaccagtttgaaaagatcgagcagttc 304 ||||||||||| || |||||||| || ||||| ||||||||| Sbjct: 450 ggcatcttcagggtgcaccagttcgagaagattgagcagttc 491
>emb|Z70313.1|ATSTRNSN A.thaliana mRNA for seryl-tRNA synthetase Length = 1615 Score = 44.1 bits (22), Expect = 0.48 Identities = 94/118 (79%) Strand = Plus / Plus Query: 18 tgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccagttggcccaat 77 ||||| |||||||||||||||| ||||| | ||||| || || || || ||||| || | Sbjct: 648 tgcaacctccttttttcatgaggaaggatgttatggccaagtgcgcacaattggcacagt 707 Query: 78 ttgatgaggagctctacaaagtaacaggtgacggagaggataagtatctcatagcaac 135 | ||||| ||||| ||||| || || ||||| ||||| || || || ||||| ||||| Sbjct: 708 tcgatgaagagctttacaaggtgactggtgaaggagatgacaaatacctcattgcaac 765
>gb|AY051054.1| Arabidopsis thaliana putative seryl-tRNA synthetase (AT5g27470) mRNA, complete cds Length = 1387 Score = 44.1 bits (22), Expect = 0.48 Identities = 94/118 (79%) Strand = Plus / Plus Query: 18 tgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccagttggcccaat 77 ||||| |||||||||||||||| ||||| | ||||| || || || || ||||| || | Sbjct: 596 tgcaacctccttttttcatgaggaaggatgttatggccaagtgcgcacaattggcacagt 655 Query: 78 ttgatgaggagctctacaaagtaacaggtgacggagaggataagtatctcatagcaac 135 | ||||| ||||| ||||| || || ||||| ||||| || || || ||||| ||||| Sbjct: 656 tcgatgaagagctttacaaggtgactggtgaaggagatgacaaatacctcattgcaac 713
>gb|AF360352.1| Arabidopsis thaliana putative seryl-tRNA synthetase (At5g27470) mRNA, complete cds Length = 1566 Score = 44.1 bits (22), Expect = 0.48 Identities = 94/118 (79%) Strand = Plus / Plus Query: 18 tgcaaactccttttttcatgagaaaggaaatcatggcaaaatgtgcccagttggcccaat 77 ||||| |||||||||||||||| ||||| | ||||| || || || || ||||| || | Sbjct: 647 tgcaacctccttttttcatgaggaaggatgttatggccaagtgcgcacaattggcacagt 706 Query: 78 ttgatgaggagctctacaaagtaacaggtgacggagaggataagtatctcatagcaac 135 | ||||| ||||| ||||| || || ||||| ||||| || || || ||||| ||||| Sbjct: 707 tcgatgaagagctttacaaggtgactggtgaaggagatgacaaatacctcattgcaac 764
>gb|BC067920.1| Xenopus tropicalis seryl-aminoacyl-tRNA synthetase 1, mRNA (cDNA clone MGC:69290 IMAGE:5308498), complete cds Length = 1756 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 263 ggcatcttcagagtccaccagtttgaaaagatcgagcagtt 303 ||||| || ||||| ||||||||||| ||||| |||||||| Sbjct: 1031 ggcatatttagagtacaccagtttgagaagattgagcagtt 1071
>gb|BC043975.1| Xenopus laevis seryl-aminoacyl-tRNA synthetase 1, mRNA (cDNA clone MGC:53987 IMAGE:5571165), complete cds Length = 1746 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 263 ggcatcttcagagtccaccagtttgaaaagatcgagcagtt 303 ||||| || ||||| ||||||||||| ||||| |||||||| Sbjct: 1024 ggcatatttagagtacaccagtttgagaagattgagcagtt 1064
>emb|X55704.1|PPLPD P.putida LPD-3 gene for lipoamide dehydrogenase Length = 4941 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 aggtgatcgaatttatcctgc 186 ||||||||||||||||||||| Sbjct: 2770 aggtgatcgaatttatcctgc 2790
>gb|AC112800.6| Rattus norvegicus X BAC CH230-275F1 (Children's Hospital Oakland Research Institute) complete sequence Length = 147560 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 45 aaatcatggcaaaatgtgccc 65 ||||||||||||||||||||| Sbjct: 43161 aaatcatggcaaaatgtgccc 43181
>ref|NM_213687.2| Xenopus tropicalis seryl-aminoacyl-tRNA synthetase 1 (sars1), mRNA Length = 1981 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 263 ggcatcttcagagtccaccagtttgaaaagatcgagcagtt 303 ||||| || ||||| ||||||||||| ||||| |||||||| Sbjct: 1125 ggcatatttagagtacaccagtttgagaagattgagcagtt 1165
>gb|AC020911.9| Homo sapiens chromosome 19 clone CTD-2562J15, complete sequence Length = 196512 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 302 ttctgtgccacaaatccaaatgaca 326 |||||||||||||||||||| |||| Sbjct: 72342 ttctgtgccacaaatccaaaagaca 72318
>gb|AC023668.5| Homo sapiens BAC clone RP11-255I17 from 2, complete sequence Length = 156410 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ccttttttcatgagaaaggaa 46 ||||||||||||||||||||| Sbjct: 62 ccttttttcatgagaaaggaa 82
>gb|AC092571.2| Homo sapiens BAC clone CTD-2200N21 from 2, complete sequence Length = 2419 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 ccttttttcatgagaaaggaa 46 ||||||||||||||||||||| Sbjct: 481 ccttttttcatgagaaaggaa 501
>gb|AC007422.7|AC007422 Homo sapiens chromosome , clone RP11-68A1, complete sequence Length = 156485 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 ccttttttcatgagaaaggaa 46 ||||||||||||||||||||| Sbjct: 1520 ccttttttcatgagaaaggaa 1500
>emb|CR762292.2| Xenopus tropicalis finished cDNA, clone TGas073f05 Length = 1981 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 263 ggcatcttcagagtccaccagtttgaaaagatcgagcagtt 303 ||||| || ||||| ||||||||||| ||||| |||||||| Sbjct: 1125 ggcatatttagagtacaccagtttgagaagattgagcagtt 1165
>emb|AL954315.6| Mouse DNA sequence from clone RP23-105O1 on chromosome 2, complete sequence Length = 167210 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 ttacaccaatgcaaactcctt 29 ||||||||||||||||||||| Sbjct: 117568 ttacaccaatgcaaactcctt 117548
>ref|XM_461614.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G02046g) partial mRNA Length = 1383 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 443 gctaagaagtatgatttggaagcatggttccc 474 ||||||||||| || || |||||||||||||| Sbjct: 1045 gctaagaagtacgacttagaagcatggttccc 1076
>ref|XM_461964.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G10439g) partial mRNA Length = 3006 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 aagaagtatgatttggaagc 465 |||||||||||||||||||| Sbjct: 2899 aagaagtatgatttggaagc 2918
>ref|NG_005114.1| Homo sapiens coagulation factor VIII region (F8@) on chromosome X Length = 652898 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 attaaaaatgcagaagattt 375 |||||||||||||||||||| Sbjct: 330698 attaaaaatgcagaagattt 330679
>ref|NM_026231.2| Mus musculus glutathione S-transferase, C-terminal domain containing (Gstcd), mRNA Length = 2633 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ctgcagatttgccgatcaga 202 |||||||||||||||||||| Sbjct: 1895 ctgcagatttgccgatcaga 1914
>gb|BC061240.1| Mus musculus glutathione S-transferase, C-terminal domain containing, mRNA (cDNA clone MGC:74393 IMAGE:6743615), complete cds Length = 2423 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ctgcagatttgccgatcaga 202 |||||||||||||||||||| Sbjct: 1891 ctgcagatttgccgatcaga 1910
>gb|BC047136.1| Mus musculus glutathione S-transferase, C-terminal domain containing, mRNA (cDNA clone MGC:54872 IMAGE:6311866), complete cds Length = 2633 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ctgcagatttgccgatcaga 202 |||||||||||||||||||| Sbjct: 1895 ctgcagatttgccgatcaga 1914
>gb|AC073278.9| Homo sapiens BAC clone RP11-661L8 from 7, complete sequence Length = 200807 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 tgaggagatgattaaaaatgcaga 369 ||||||||| |||||||||||||| Sbjct: 137530 tgaggagattattaaaaatgcaga 137507
>gb|AC101663.10| Mus musculus chromosome 1, clone RP23-37L1, complete sequence Length = 192592 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 agctggcatcttcagagtcc 278 |||||||||||||||||||| Sbjct: 28140 agctggcatcttcagagtcc 28159
>emb|BX293995.4| Human DNA sequence from clone RP11-143H17 on chromosome X Contains the 3' end of a novel gene (C6.1A) and a phosphatidylinositol binding clathrin assembly protein (PICALM) pseudogene, complete sequence Length = 74649 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 attaaaaatgcagaagattt 375 |||||||||||||||||||| Sbjct: 23827 attaaaaatgcagaagattt 23846
>emb|AL139190.9| Human DNA sequence from clone RP11-34M7 on chromosome 6, complete sequence Length = 48119 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 gaatttatcctgcagatttg 193 |||||||||||||||||||| Sbjct: 32736 gaatttatcctgcagatttg 32717
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 aagaagtatgatttggaagc 465 |||||||||||||||||||| Sbjct: 817952 aagaagtatgatttggaagc 817971 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 443 gctaagaagtatgatttggaagcatggttccc 474 ||||||||||| || || |||||||||||||| Sbjct: 142595 gctaagaagtacgacttagaagcatggttccc 142564
>gb|AC164250.4| Mus musculus BAC RP24-327O15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 221612 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 352 gatgattaaaaatgcagaagatttttatcagg 383 ||||||||||||||| ||| |||||| ||||| Sbjct: 141177 gatgattaaaaatgctgaacatttttttcagg 141146
>emb|BX571860.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 2/17 Length = 349287 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 catcggagcaaccgctatgt 154 |||||||||||||||||||| Sbjct: 72498 catcggagcaaccgctatgt 72479
>gb|AC160936.2| Mus musculus BAC clone RP23-300E17 from chromosome 12, complete sequence Length = 198897 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tggcaaaatgtgcccagttg 70 |||||||||||||||||||| Sbjct: 6031 tggcaaaatgtgcccagttg 6050
>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome Length = 2225959 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 tgattaaaaatgcagaagat 373 |||||||||||||||||||| Sbjct: 922695 tgattaaaaatgcagaagat 922714
>gb|AY119252.1| Drosophila melanogaster SD21818 full insert cDNA Length = 1482 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 aattgcactgattatcaggcaagg 535 |||||||| ||||||||||||||| Sbjct: 1147 aattgcacggattatcaggcaagg 1170
>ref|NM_079641.2| Drosophila melanogaster Seryl-tRNA synthetase CG4938-RA (Aats-ser), mRNA Length = 1533 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 aattgcactgattatcaggcaagg 535 |||||||| ||||||||||||||| Sbjct: 1148 aattgcacggattatcaggcaagg 1171
>gb|AC160561.2| Mus musculus BAC clone RP23-102D22 from chromosome 12, complete sequence Length = 204231 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 tggcaaaatgtgcccagttg 70 |||||||||||||||||||| Sbjct: 124990 tggcaaaatgtgcccagttg 125009
>dbj|AK017059.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933434L15 product:similar to OVARC1001010 PROTEIN [Homo sapiens], full insert sequence Length = 1797 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ctgcagatttgccgatcaga 202 |||||||||||||||||||| Sbjct: 1170 ctgcagatttgccgatcaga 1189
>dbj|AK013967.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110001N19 product:hypothetical SAM (and some other nucleotide) binding motif containing protein, full insert sequence Length = 2249 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ctgcagatttgccgatcaga 202 |||||||||||||||||||| Sbjct: 747 ctgcagatttgccgatcaga 766
>dbj|AK029724.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930511A03 product:similar to OVARC1001010 PROTEIN [Homo sapiens], full insert sequence Length = 2393 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ctgcagatttgccgatcaga 202 |||||||||||||||||||| Sbjct: 1896 ctgcagatttgccgatcaga 1915
>gb|AC156639.2| Mus musculus BAC clone RP23-301M11 from chromosome 9, complete sequence Length = 188292 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 tgaggagatgattaaaaatg 365 |||||||||||||||||||| Sbjct: 31204 tgaggagatgattaaaaatg 31185
>dbj|AK020021.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830430H09 product:similar to OVARC1001010 PROTEIN [Homo sapiens], full insert sequence Length = 2224 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ctgcagatttgccgatcaga 202 |||||||||||||||||||| Sbjct: 1505 ctgcagatttgccgatcaga 1524
>dbj|AK033409.1| Mus musculus 11 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:8530402F04 product:similar to OVARC1001010 PROTEIN [Homo sapiens], full insert sequence Length = 3455 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ctgcagatttgccgatcaga 202 |||||||||||||||||||| Sbjct: 1934 ctgcagatttgccgatcaga 1953
>emb|BX890566.8| Mouse DNA sequence from clone RP23-342I1 on chromosome X, complete sequence Length = 173737 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 ctgggaaatgcatgaggaga 353 |||||||||||||||||||| Sbjct: 85155 ctgggaaatgcatgaggaga 85174
>gb|AC007648.6|AC007648 Drosophila melanogaster, chromosome 3R, region 88E-88F, BAC clone BACR13A02, complete sequence Length = 166141 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 aattgcactgattatcaggcaagg 535 |||||||| ||||||||||||||| Sbjct: 100889 aattgcacggattatcaggcaagg 100912
>gb|AC007769.3|AC007769 Drosophila melanogaster, chromosome 3R, region 88F-88F, BAC clone BACR17K19, complete sequence Length = 167918 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 aattgcactgattatcaggcaagg 535 |||||||| ||||||||||||||| Sbjct: 983 aattgcacggattatcaggcaagg 1006
>ref|NM_204661.1| Gallus gallus ovomucin alpha-subunit (LOC395381), mRNA Length = 6558 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 tgctcttaatgatgctgcag 443 |||||||||||||||||||| Sbjct: 3198 tgctcttaatgatgctgcag 3179
>dbj|AB046524.1| Gallus gallus mRNA for ovomucin alpha-subunit, complete cds Length = 6558 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 tgctcttaatgatgctgcag 443 |||||||||||||||||||| Sbjct: 3198 tgctcttaatgatgctgcag 3179
>gb|AC129948.3| Branchiostoma floridae, clone -33B4, complete sequence Length = 66265 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tgggaaatgcatgaggagat 354 |||||||||||||||||||| Sbjct: 35808 tgggaaatgcatgaggagat 35789
>emb|BX548004.7| Mouse DNA sequence from clone RP23-334I1 on chromosome X, complete sequence Length = 107181 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ctgggaaatgcatgaggaga 353 |||||||||||||||||||| Sbjct: 97458 ctgggaaatgcatgaggaga 97439
>gb|AC144773.3| Mus musculus BAC clone RP24-176P22 from 1, complete sequence Length = 167510 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 agctggcatcttcagagtcc 278 |||||||||||||||||||| Sbjct: 118415 agctggcatcttcagagtcc 118434
>gb|AC007478.1|AC007478 Arabidopsis thaliana BAC F15A18 from chromosome V near 68.5 cM, complete sequence Length = 107931 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 18 tgcaaactccttttttcatgagaaagga 45 ||||| |||||||||||||||| ||||| Sbjct: 5419 tgcaacctccttttttcatgaggaagga 5446
>gb|AC159217.3| Pan troglodytes BAC clone CH251-347C9 from chromosome unknown, complete sequence Length = 173847 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 attaaaaatgcagaagattt 375 |||||||||||||||||||| Sbjct: 148835 attaaaaatgcagaagattt 148816
>gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46 of 118 of the complete sequence Length = 236375 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 aattgcactgattatcaggcaagg 535 |||||||| ||||||||||||||| Sbjct: 145321 aattgcacggattatcaggcaagg 145344
>gb|AC007123.1|AC007123 Arabidopsis thaliana BAC F21A20 from chromosome V near 61 cM, complete sequence Length = 133195 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 18 tgcaaactccttttttcatgagaaagga 45 ||||| |||||||||||||||| ||||| Sbjct: 97771 tgcaacctccttttttcatgaggaagga 97798
>dbj|AP003024.2| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2336M19, complete sequence Length = 39000 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 agcagttctgtgccacaaat 316 |||||||||||||||||||| Sbjct: 28887 agcagttctgtgccacaaat 28868
>emb|CT033779.9| Mouse DNA sequence from clone RP24-230F21 on chromosome 9, complete sequence Length = 161997 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 352 gatgattaaaaatgcagaagatttttatcagg 383 |||||||||||||| |||| |||||| ||||| Sbjct: 81648 gatgattaaaaatgtagaacatttttctcagg 81617
>emb|CT573417.1| Pan troglodytes chromosome X clone PTB-001B13 map Xq28, complete sequence Length = 117521 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 attaaaaatgcagaagattt 375 |||||||||||||||||||| Sbjct: 67209 attaaaaatgcagaagattt 67190
>gb|AC140231.3| Mus musculus BAC clone RP24-493L15 from 6, complete sequence Length = 185517 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 352 gatgattaaaaatgcagaagatttttatcagg 383 ||||||||||||||| ||| |||||| ||||| Sbjct: 167183 gatgattaaaaatgctgaacatttttttcagg 167214
>gb|AC124593.4| Mus musculus BAC clone RP23-10D15 from 3, complete sequence Length = 187362 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 ctgcagatttgccgatcaga 202 |||||||||||||||||||| Sbjct: 50389 ctgcagatttgccgatcaga 50370
>gb|AC171203.1| Mus musculus BAC clone RP24-260O23 from chromosome 9, complete sequence Length = 171374 Score = 40.1 bits (20), Expect = 7.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 352 gatgattaaaaatgcagaagatttttatcagg 383 |||||||||||||| |||| |||||| ||||| Sbjct: 13879 gatgattaaaaatgtagaacatttttctcagg 13848
>emb|AL133369.4|CNS01DUU Human chromosome 14 DNA sequence BAC C-2128A3 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 103601 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 atgaggagatgattaaaaat 364 |||||||||||||||||||| Sbjct: 52642 atgaggagatgattaaaaat 52623
>emb|Y14823.1|DMSURF4 Drosophila melanogaster SURF-4 gene and gene encoding seryl-tRNA synthetase Length = 5991 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 aattgcactgattatcaggcaagg 535 |||||||| ||||||||||||||| Sbjct: 5009 aattgcacggattatcaggcaagg 4986 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,082,299 Number of Sequences: 3902068 Number of extensions: 5082299 Number of successful extensions: 91771 Number of sequences better than 10.0: 98 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91473 Number of HSP's gapped (non-prelim): 296 length of query: 550 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 527 effective length of database: 17,143,297,704 effective search space: 9034517890008 effective search space used: 9034517890008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
