ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd22l21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 80 1e-11
3emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396... 80 1e-11
4emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC OSJNBb... 80 1e-11
5ref|XM_964076.1| PREDICTED: Tribolium castaneum similar to CG176... 44 0.54
6ref|NM_194876.1| Oryza sativa (japonica cultivar-group) putative... 42 2.1
7gb|AC098565.3| Oryza sativa chromosome 10 clone OSJNBa0028C16, c... 42 2.1
8dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
9dbj|AK066347.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.1
10gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
11emb|AL672204.7| Mouse DNA sequence from clone RP23-325N6 on chro... 42 2.1
12ref|NM_196155.1| Oryza sativa (japonica cultivar-group) hypothet... 40 8.5
13gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 8.5
14gb|AE017134.1| Yersinia pestis biovar Medievalis str. 91001 sect... 40 8.5
15gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 8.5
16ref|XM_360359.1| Magnaporthe grisea 70-15 predicted protein (MG0... 40 8.5
17ref|XM_419722.1| PREDICTED: Gallus gallus similar to Interferon-... 40 8.5
18gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.5
19ref|NM_033270.1| Mus musculus E2F transcription factor 6 (E2f6),... 40 8.5
20gb|AE009952.1| Yersinia pestis KIM, complete genome 40 8.5
21gb|AC141478.3| Mus musculus BAC clone RP24-82N16 from chromosome... 40 8.5
22ref|XM_757296.1| Ustilago maydis 521 hypothetical protein (UM062... 40 8.5
23gb|AC123867.4| Mus musculus BAC clone RP23-127O13 from chromosom... 40 8.5
24gb|AC128671.4| Mus musculus BAC clone RP23-247F12 from 18, compl... 40 8.5
25gb|BC037656.1| Mus musculus E2F transcription factor 6, mRNA (cD... 40 8.5
26gb|BC020534.1| Mus musculus cholecystokinin A receptor, mRNA (cD... 40 8.5
27emb|AL049759.10|HSJ930L11 Human DNA sequence from clone RP5-930L... 40 8.5
28emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome... 40 8.5
29emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 8.5
30emb|AL596171.1| Listeria innocua Clip11262 complete genome, segm... 40 8.5
31emb|AJ414151.1| Yersinia pestis strain CO92 complete genome; seg... 40 8.5
32gb|AC151836.3| Mus musculus BAC clone RP23-359F5 from chromosome... 40 8.5
33gb|AF487711.1| Mus musculus transcriptional repressor E2F6 (E2f6... 40 8.5
34gb|AC079935.3| Genomic sequence for Oryza sativa (japonica culti... 40 8.5
35dbj|AK149061.1| Mus musculus 2 days neonate sympathetic ganglion... 40 8.5
36dbj|AK146792.1| Mus musculus 17 days embryo heart cDNA, RIKEN fu... 40 8.5
37gb|AC157352.2| Mus musculus BAC clone RP24-483A21 from chromosom... 40 8.5
38dbj|AK035116.1| Mus musculus 12 days embryo embryonic body betwe... 40 8.5
39dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
40dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
41dbj|AP006176.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
42emb|BX248131.6| Zebrafish DNA sequence from clone CH211-236P5, c... 40 8.5
43emb|AL954390.19| Mouse DNA sequence from clone RP23-13H18 on chr... 40 8.5
44gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 8.5
45gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 8.5
46gb|AF032131.1|AF032131 Mus musculus E2F-like transcriptional rep... 40 8.5
47emb|AJ937769.1| Uncultured epsilon proteobacterium fosmid clone ... 40 8.5
48gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete ge... 40 8.5
49dbj|AP006648.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 8.5
50gb|AC169518.1| Mus musculus chromosome 8, clone RP23-454H8, comp... 40 8.5
51dbj|AP000359.1| Homo sapiens genomic DNA, chromosome 22q11.2, cl... 40 8.5
52emb|AL627307.18| Mouse DNA sequence from clone RP23-258J11 on ch... 40 8.5 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                            
Query: 324      ggcaacacatatcttatgaaggcacgggacaagctccatcgcggcctcacaggagcggca 383
                ||||||||| |||||||||||||| |||||||||| |||| | || ||| |||| || ||
Sbjct: 23640585 ggcaacacaaatcttatgaaggcatgggacaagctgcatcacagcatcataggatcgaca 23640644

                                                
Query: 384      tatgatgcagtagtcactcttggcatgtggag 415
                 ||||||||||| |||||||||| || |||||
Sbjct: 23640645 gatgatgcagtaatcactcttgggatatggag 23640676
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                            
Query: 324      ggcaacacatatcttatgaaggcacgggacaagctccatcgcggcctcacaggagcggca 383
                ||||||||| |||||||||||||| |||||||||| |||| | || ||| |||| || ||
Sbjct: 23568772 ggcaacacaaatcttatgaaggcatgggacaagctgcatcacagcatcataggatcgaca 23568831

                                                
Query: 384      tatgatgcagtagtcactcttggcatgtggag 415
                 ||||||||||| |||||||||| || |||||
Sbjct: 23568832 gatgatgcagtaatcactcttgggatatggag 23568863
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>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 157690

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                         
Query: 324   ggcaacacatatcttatgaaggcacgggacaagctccatcgcggcctcacaggagcggca 383
             ||||||||| |||||||||||||| |||||||||| |||| | || ||| |||| || ||
Sbjct: 65825 ggcaacacaaatcttatgaaggcatgggacaagctgcatcacagcatcataggatcgaca 65766

                                             
Query: 384   tatgatgcagtagtcactcttggcatgtggag 415
              ||||||||||| |||||||||| || |||||
Sbjct: 65765 gatgatgcagtaatcactcttgggatatggag 65734
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>emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC OSJNBb0036A19 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 128795

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                          
Query: 324    ggcaacacatatcttatgaaggcacgggacaagctccatcgcggcctcacaggagcggca 383
              ||||||||| |||||||||||||| |||||||||| |||| | || ||| |||| || ||
Sbjct: 115037 ggcaacacaaatcttatgaaggcatgggacaagctgcatcacagcatcataggatcgaca 114978

                                              
Query: 384    tatgatgcagtagtcactcttggcatgtggag 415
               ||||||||||| |||||||||| || |||||
Sbjct: 114977 gatgatgcagtaatcactcttgggatatggag 114946
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>ref|XM_964076.1| PREDICTED: Tribolium castaneum similar to CG17608-PA, isoform A
           (LOC657629), mRNA
          Length = 807

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 223 gcggcctggctttggggcacga 244
           ||||||||||||||||||||||
Sbjct: 394 gcggcctggctttggggcacga 415
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>ref|NM_194876.1| Oryza sativa (japonica cultivar-group) putative RNA-binding protein
           (OSJNBa0028C16.8), mRNA
          Length = 1419

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 283 gacggctaccgccgccaccgccgcg 307
           ||||| |||||||||||||||||||
Sbjct: 79  gacgggtaccgccgccaccgccgcg 103
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>gb|AC098565.3| Oryza sativa chromosome 10 clone OSJNBa0028C16, complete sequence
          Length = 166757

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 283   gacggctaccgccgccaccgccgcg 307
             ||||| |||||||||||||||||||
Sbjct: 67010 gacgggtaccgccgccaccgccgcg 66986
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 283     gacggctaccgccgccaccgccgcg 307
               ||||| |||||||||||||||||||
Sbjct: 3097378 gacgggtaccgccgccaccgccgcg 3097354



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 285      cggctaccgccgccaccgcc 304
                ||||||||||||||||||||
Sbjct: 11471282 cggctaccgccgccaccgcc 11471301
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>dbj|AK066347.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065B13, full
           insert sequence
          Length = 3637

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 283 gacggctaccgccgccaccgccgcg 307
           ||||| |||||||||||||||||||
Sbjct: 344 gacgggtaccgccgccaccgccgcg 368
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 283     gacggctaccgccgccaccgccgcg 307
               ||||| |||||||||||||||||||
Sbjct: 3097299 gacgggtaccgccgccaccgccgcg 3097275



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 285      cggctaccgccgccaccgcc 304
                ||||||||||||||||||||
Sbjct: 11477722 cggctaccgccgccaccgcc 11477741
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>emb|AL672204.7| Mouse DNA sequence from clone RP23-325N6 on chromosome X, complete
             sequence
          Length = 129254

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 570   ctgcttggagtgactgcttgg 590
             |||||||||||||||||||||
Sbjct: 39499 ctgcttggagtgactgcttgg 39519
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>ref|NM_196155.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0095C06.6), mRNA
          Length = 432

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 cggctaccgccgccaccgcc 304
           ||||||||||||||||||||
Sbjct: 214 cggctaccgccgccaccgcc 195
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 299     accgccgcgtgtgtgctgcc 318
               ||||||||||||||||||||
Sbjct: 2040821 accgccgcgtgtgtgctgcc 2040840
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>gb|AE017134.1| Yersinia pestis biovar Medievalis str. 91001 section 8 of 16 of the
              complete genome
          Length = 290029

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    gctaccgccgccaccgccgc 306
              ||||||||||||||||||||
Sbjct: 137640 gctaccgccgccaccgccgc 137659
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    gctaccgccgccaccgccgc 306
              ||||||||||||||||||||
Sbjct: 178026 gctaccgccgccaccgccgc 178007
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>ref|XM_360359.1| Magnaporthe grisea 70-15 predicted protein (MG05733.4) partial mRNA
          Length = 723

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 574 ttggagtgactgcttggccc 593
           ||||||||||||||||||||
Sbjct: 657 ttggagtgactgcttggccc 676
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>ref|XM_419722.1| PREDICTED: Gallus gallus similar to Interferon-gamma receptor alpha
            chain precursor (IFN-gamma-R1) (CD119 antigen) (CDw119)
            (LOC421685), mRNA
          Length = 1581

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 566  acagctgcttggagtgactgcttg 589
            ||||||||||||| ||||||||||
Sbjct: 1482 acagctgcttggaatgactgcttg 1459
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>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0053E05, complete sequence
          Length = 196284

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   cggctaccgccgccaccgcc 304
             ||||||||||||||||||||
Sbjct: 35549 cggctaccgccgccaccgcc 35568
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>ref|NM_033270.1| Mus musculus E2F transcription factor 6 (E2f6), mRNA
          Length = 2409

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 agcggacggcgcggagacag 147
           ||||||||||||||||||||
Sbjct: 232 agcggacggcgcggagacag 251
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>gb|AE009952.1| Yersinia pestis KIM, complete genome
          Length = 4600755

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 287     gctaccgccgccaccgccgc 306
               ||||||||||||||||||||
Sbjct: 2397878 gctaccgccgccaccgccgc 2397859
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>gb|AC141478.3| Mus musculus BAC clone RP24-82N16 from chromosome 18, complete sequence
          Length = 184122

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 501    ggggcacttactaggtactt 520
              ||||||||||||||||||||
Sbjct: 134856 ggggcacttactaggtactt 134875
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>ref|XM_757296.1| Ustilago maydis 521 hypothetical protein (UM06242.1) partial mRNA
          Length = 1656

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 290 accgccgccaccgccgcgtg 309
           ||||||||||||||||||||
Sbjct: 600 accgccgccaccgccgcgtg 619
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>gb|AC123867.4| Mus musculus BAC clone RP23-127O13 from chromosome 14, complete sequence
          Length = 216834

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    gctaccgccgccaccgccgc 306
              ||||||||||||||||||||
Sbjct: 196857 gctaccgccgccaccgccgc 196838
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>gb|AC128671.4| Mus musculus BAC clone RP23-247F12 from 18, complete sequence
          Length = 172016

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 501    ggggcacttactaggtactt 520
              ||||||||||||||||||||
Sbjct: 155724 ggggcacttactaggtactt 155705
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>gb|BC037656.1| Mus musculus E2F transcription factor 6, mRNA (cDNA clone MGC:46747
           IMAGE:5358554), complete cds
          Length = 2379

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 agcggacggcgcggagacag 147
           ||||||||||||||||||||
Sbjct: 131 agcggacggcgcggagacag 150
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>gb|BC020534.1| Mus musculus cholecystokinin A receptor, mRNA (cDNA clone MGC:19349
           IMAGE:4236240), complete cds
          Length = 2624

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 287 gctaccgccgccaccgccgc 306
           ||||||||||||||||||||
Sbjct: 962 gctaccgccgccaccgccgc 943
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>emb|AL049759.10|HSJ930L11 Human DNA sequence from clone RP5-930L11 on chromosome 22q11.21-11.23,
             complete sequence
          Length = 134957

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   gctaccgccgccaccgccgc 306
             ||||||||||||||||||||
Sbjct: 16073 gctaccgccgccaccgccgc 16092
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>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13
          Length = 341957

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    gctaccgccgccaccgccgc 306
              ||||||||||||||||||||
Sbjct: 177855 gctaccgccgccaccgccgc 177836
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>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14
          Length = 343050

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    gctaccgccgccaccgccgc 306
              ||||||||||||||||||||
Sbjct: 178045 gctaccgccgccaccgccgc 178026
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>emb|AL596171.1| Listeria innocua Clip11262 complete genome, segment 9/12
          Length = 258650

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 539   aaaggagaatctggtttcat 558
             ||||||||||||||||||||
Sbjct: 49947 aaaggagaatctggtttcat 49966
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>emb|AJ414151.1| Yersinia pestis strain CO92 complete genome; segment 11/20
          Length = 334050

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    gctaccgccgccaccgccgc 306
              ||||||||||||||||||||
Sbjct: 156314 gctaccgccgccaccgccgc 156333
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>gb|AC151836.3| Mus musculus BAC clone RP23-359F5 from chromosome 14, complete sequence
          Length = 230502

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 287   gctaccgccgccaccgccgc 306
             ||||||||||||||||||||
Sbjct: 75400 gctaccgccgccaccgccgc 75381
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>gb|AF487711.1| Mus musculus transcriptional repressor E2F6 (E2f6) gene, complete
            cds, alternatively spliced
          Length = 22415

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 128  agcggacggcgcggagacag 147
            ||||||||||||||||||||
Sbjct: 6213 agcggacggcgcggagacag 6232
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>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OSJNBa0095C06, from Chromosome 10,
             complete sequence
          Length = 156159

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   cggctaccgccgccaccgcc 304
             ||||||||||||||||||||
Sbjct: 55275 cggctaccgccgccaccgcc 55294
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>dbj|AK149061.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
           full-length enriched library, clone:7120480E13
           product:E2F transcription factor 6, full insert sequence
          Length = 2698

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 agcggacggcgcggagacag 147
           ||||||||||||||||||||
Sbjct: 259 agcggacggcgcggagacag 278
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>dbj|AK146792.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:I920056K09 product:E2F transcription
           factor 6, full insert sequence
          Length = 2483

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 agcggacggcgcggagacag 147
           ||||||||||||||||||||
Sbjct: 250 agcggacggcgcggagacag 269
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>gb|AC157352.2| Mus musculus BAC clone RP24-483A21 from chromosome 12, complete
             sequence
          Length = 131417

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   agcggacggcgcggagacag 147
             ||||||||||||||||||||
Sbjct: 60716 agcggacggcgcggagacag 60735
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>dbj|AK035116.1| Mus musculus 12 days embryo embryonic body between diaphragm region
           and neck cDNA, RIKEN full-length enriched library,
           clone:9430090E10 product:E2F transcription factor 6,
           full insert sequence
          Length = 2143

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 agcggacggcgcggagacag 147
           ||||||||||||||||||||
Sbjct: 251 agcggacggcgcggagacag 270
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 290     accgccgccaccgccgcgtg 309
               ||||||||||||||||||||
Sbjct: 4680774 accgccgccaccgccgcgtg 4680793
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 285      cggctaccgccgccaccgcc 304
                ||||||||||||||||||||
Sbjct: 26184501 cggctaccgccgccaccgcc 26184520
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>dbj|AP006176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0681H07
          Length = 144722

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    accgccgccaccgccgcgtg 309
              ||||||||||||||||||||
Sbjct: 133643 accgccgccaccgccgcgtg 133662
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>emb|BX248131.6| Zebrafish DNA sequence from clone CH211-236P5, complete sequence
          Length = 162685

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 484   atgtaacacagaagaagggg 503
             ||||||||||||||||||||
Sbjct: 45376 atgtaacacagaagaagggg 45357
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>emb|AL954390.19| Mouse DNA sequence from clone RP23-13H18 on chromosome 4, complete
             sequence
          Length = 185237

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   tagccatcagcccgccaccc 205
             ||||||||||||||||||||
Sbjct: 43343 tagccatcagcccgccaccc 43362
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 282     ggacggctaccgccgccaccgccg 305
               ||||| ||||||||||||||||||
Sbjct: 4491360 ggacgcctaccgccgccaccgccg 4491383
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 279     tcaggacggctaccgccgccaccgccgc 306
               |||||||||| ||| |||||||||||||
Sbjct: 4320699 tcaggacggccaccaccgccaccgccgc 4320726
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>gb|AF032131.1|AF032131 Mus musculus E2F-like transcriptional repressor protein mRNA,
           complete cds
          Length = 2409

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 agcggacggcgcggagacag 147
           ||||||||||||||||||||
Sbjct: 232 agcggacggcgcggagacag 251
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>emb|AJ937769.1| Uncultured epsilon proteobacterium fosmid clone b1dcf1.3.c08
          Length = 38167

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 396  gtcactcttggcatgtggag 415
            ||||||||||||||||||||
Sbjct: 5596 gtcactcttggcatgtggag 5577
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>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome
          Length = 2905187

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 539     aaaggagaatctggtttcat 558
               ||||||||||||||||||||
Sbjct: 2083705 aaaggagaatctggtttcat 2083724
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>dbj|AP006648.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29O08, TM0320a,
             complete sequence
          Length = 76227

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   gctaccgccgccaccgccgc 306
             ||||||||||||||||||||
Sbjct: 25377 gctaccgccgccaccgccgc 25396
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>gb|AC169518.1| Mus musculus chromosome 8, clone RP23-454H8, complete sequence
          Length = 194822

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 417   ctacaggtggaaagaactgt 436
             ||||||||||||||||||||
Sbjct: 48777 ctacaggtggaaagaactgt 48758
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>dbj|AP000359.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB63E7
          Length = 101507

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 287  gctaccgccgccaccgccgc 306
            ||||||||||||||||||||
Sbjct: 3740 gctaccgccgccaccgccgc 3721
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>emb|AL627307.18| Mouse DNA sequence from clone RP23-258J11 on chromosome 4, complete
             sequence
          Length = 108542

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   gctaccgccgccaccgccgc 306
             ||||||||||||||||||||
Sbjct: 20905 gctaccgccgccaccgccgc 20924


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,124,459
Number of Sequences: 3902068
Number of extensions: 4124459
Number of successful extensions: 95015
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94028
Number of HSP's gapped (non-prelim): 987
length of query: 623
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 600
effective length of database: 17,143,297,704
effective search space: 10285978622400
effective search space used: 10285978622400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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