ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd23a16 |
|---|---|
| Clone Library Name | barley_pub |
>PHT12_ARATH (Q96243) Inorganic phosphate transporter 1-2 (AtPht1;2) (H(+)/Pi| cotransporter) Length = 524 Score = 121 bits (304), Expect(2) = 1e-33 Identities = 57/80 (71%), Positives = 61/80 (76%) Frame = +3 Query: 63 FTAINWIPKAKTMSALEEVHRIARAQTLIALCGTXPGYWFTVALIDRIGRXWIQLGGFFF 242 F+AI WIPKA TM+A EV RIARAQTLIALC T PGYWFTVA ID IGR IQL GFF Sbjct: 322 FSAIGWIPKAATMNATHEVFRIARAQTLIALCSTVPGYWFTVAFIDTIGRFKIQLNGFFM 381 Query: 243 MAVFMLGLAFPYHHWTTPGN 302 M VFM +AFPY+HW P N Sbjct: 382 MTVFMFAIAFPYNHWIKPEN 401 Score = 39.3 bits (90), Expect(2) = 1e-33 Identities = 17/18 (94%), Positives = 17/18 (94%) Frame = +2 Query: 8 WFLLDIAFYSQNLXQKDI 61 WFLLDIAFYSQNL QKDI Sbjct: 304 WFLLDIAFYSQNLFQKDI 321
>PHT11_ARATH (Q8VYM2) Inorganic phosphate transporter 1-1 (AtPht1;1) (H(+)/Pi| cotransporter) Length = 524 Score = 121 bits (304), Expect(2) = 1e-33 Identities = 57/80 (71%), Positives = 61/80 (76%) Frame = +3 Query: 63 FTAINWIPKAKTMSALEEVHRIARAQTLIALCGTXPGYWFTVALIDRIGRXWIQLGGFFF 242 F+AI WIPKA TM+A EV RIARAQTLIALC T PGYWFTVA ID IGR IQL GFF Sbjct: 322 FSAIGWIPKAATMNATHEVFRIARAQTLIALCSTVPGYWFTVAFIDTIGRFKIQLNGFFM 381 Query: 243 MAVFMLGLAFPYHHWTTPGN 302 M VFM +AFPY+HW P N Sbjct: 382 MTVFMFAIAFPYNHWIKPEN 401 Score = 39.3 bits (90), Expect(2) = 1e-33 Identities = 17/18 (94%), Positives = 17/18 (94%) Frame = +2 Query: 8 WFLLDIAFYSQNLXQKDI 61 WFLLDIAFYSQNL QKDI Sbjct: 304 WFLLDIAFYSQNLFQKDI 321
>PHT13_ARATH (O48639) Inorganic phosphate transporter 1-3 (AtPht1;3) (H(+)/Pi| cotransporter) Length = 521 Score = 120 bits (300), Expect(2) = 4e-33 Identities = 56/80 (70%), Positives = 62/80 (77%) Frame = +3 Query: 63 FTAINWIPKAKTMSALEEVHRIARAQTLIALCGTXPGYWFTVALIDRIGRXWIQLGGFFF 242 F+AI WIPKA TM+A+ EV +IARAQTLIALC T PGYWFTVA ID IGR IQL GFF Sbjct: 322 FSAIGWIPKAATMNAIHEVFKIARAQTLIALCSTVPGYWFTVAFIDIIGRFAIQLMGFFM 381 Query: 243 MAVFMLGLAFPYHHWTTPGN 302 M VFM +AFPY+HW P N Sbjct: 382 MTVFMFAIAFPYNHWILPDN 401 Score = 39.3 bits (90), Expect(2) = 4e-33 Identities = 17/18 (94%), Positives = 17/18 (94%) Frame = +2 Query: 8 WFLLDIAFYSQNLXQKDI 61 WFLLDIAFYSQNL QKDI Sbjct: 304 WFLLDIAFYSQNLFQKDI 321
>PHT17_ARATH (Q494P0) Inorganic phosphate transporter 1-7 (AtPht1;7) (H(+)/Pi| cotransporter) Length = 535 Score = 117 bits (292), Expect(2) = 3e-32 Identities = 55/80 (68%), Positives = 62/80 (77%) Frame = +3 Query: 63 FTAINWIPKAKTMSALEEVHRIARAQTLIALCGTXPGYWFTVALIDRIGRXWIQLGGFFF 242 F+AI WIP A+TM+A++EV +IARAQTLIALC T PGYWFTVA ID IGR IQ+ GFFF Sbjct: 319 FSAIGWIPPAQTMNAIQEVFKIARAQTLIALCSTVPGYWFTVAFIDVIGRFAIQMMGFFF 378 Query: 243 MAVFMLGLAFPYHHWTTPGN 302 M VFM LA PY HWT N Sbjct: 379 MTVFMFALAIPYDHWTHKEN 398 Score = 39.3 bits (90), Expect(2) = 3e-32 Identities = 17/18 (94%), Positives = 17/18 (94%) Frame = +2 Query: 8 WFLLDIAFYSQNLXQKDI 61 WFLLDIAFYSQNL QKDI Sbjct: 301 WFLLDIAFYSQNLFQKDI 318
>PHT14_ARATH (Q96303) Inorganic phosphate transporter 1-4 (AtPht1;4) (H(+)/Pi| cotransporter) Length = 534 Score = 116 bits (290), Expect(2) = 6e-32 Identities = 54/80 (67%), Positives = 63/80 (78%) Frame = +3 Query: 63 FTAINWIPKAKTMSALEEVHRIARAQTLIALCGTXPGYWFTVALIDRIGRXWIQLGGFFF 242 F+AI WIP A++M+A++EV +IARAQTLIALC T PGYWFTVA ID IGR IQ+ GFFF Sbjct: 323 FSAIGWIPPAQSMNAIQEVFKIARAQTLIALCSTVPGYWFTVAFIDVIGRFAIQMMGFFF 382 Query: 243 MAVFMLGLAFPYHHWTTPGN 302 M VFM LA PY+HWT N Sbjct: 383 MTVFMFALAIPYNHWTHKEN 402 Score = 39.3 bits (90), Expect(2) = 6e-32 Identities = 17/18 (94%), Positives = 17/18 (94%) Frame = +2 Query: 8 WFLLDIAFYSQNLXQKDI 61 WFLLDIAFYSQNL QKDI Sbjct: 305 WFLLDIAFYSQNLFQKDI 322
>PHT16_ARATH (Q9ZWT3) Inorganic phosphate transporter 1-6 (AtPht1;6) (H(+)/Pi| cotransporter) Length = 516 Score = 110 bits (275), Expect(2) = 3e-30 Identities = 48/80 (60%), Positives = 60/80 (75%) Frame = +3 Query: 63 FTAINWIPKAKTMSALEEVHRIARAQTLIALCGTXPGYWFTVALIDRIGRXWIQLGGFFF 242 FT I W+P AKTM+A++E++ IA+AQT+IA C T PGY+FTV ID +GR IQ+ GF Sbjct: 323 FTTIGWLPSAKTMNAIQELYMIAKAQTIIACCSTVPGYFFTVGFIDYMGRKKIQIMGFAM 382 Query: 243 MAVFMLGLAFPYHHWTTPGN 302 M +FML LA PYHHWT P N Sbjct: 383 MTIFMLSLAIPYHHWTLPAN 402 Score = 39.3 bits (90), Expect(2) = 3e-30 Identities = 17/18 (94%), Positives = 17/18 (94%) Frame = +2 Query: 8 WFLLDIAFYSQNLXQKDI 61 WFLLDIAFYSQNL QKDI Sbjct: 305 WFLLDIAFYSQNLFQKDI 322
>PHT15_ARATH (Q8GYF4) Inorganic phosphate transporter 1-5 (AtPht1;5) (H(+)/Pi| cotransporter) Length = 542 Score = 111 bits (278), Expect(2) = 4e-30 Identities = 49/75 (65%), Positives = 59/75 (78%) Frame = +3 Query: 63 FTAINWIPKAKTMSALEEVHRIARAQTLIALCGTXPGYWFTVALIDRIGRXWIQLGGFFF 242 +TAI WIP A+TM+A+ EV +++AQTLIALCGT PGYWFTVA ID +GR +IQL GF F Sbjct: 324 YTAIGWIPAAETMNAIHEVFTVSKAQTLIALCGTVPGYWFTVAFIDILGRFFIQLMGFIF 383 Query: 243 MAVFMLGLAFPYHHW 287 M +FM LA PY HW Sbjct: 384 MTIFMFALAIPYDHW 398 Score = 37.7 bits (86), Expect(2) = 4e-30 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = +2 Query: 2 TCWFLLDIAFYSQNLXQKDI 61 T WFLLDIA+YS NL QKDI Sbjct: 304 TTWFLLDIAYYSSNLFQKDI 323
>PHT18_ARATH (Q9SYQ1) Inorganic phosphate transporter 1-8 (AtPht1;8) (H(+)/Pi| cotransporter) Length = 534 Score = 64.7 bits (156), Expect(2) = 8e-13 Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 4/76 (5%) Frame = +3 Query: 90 AKTMSALEEVH----RIARAQTLIALCGTXPGYWFTVALIDRIGRXWIQLGGFFFMAVFM 257 +K S E V+ +A +IA C T PGYWFTV ID+IGR IQ+ GFFFMAV Sbjct: 315 SKKPSTAENVYDAAFEVAELGAIIAACSTIPGYWFTVYFIDKIGRVKIQIMGFFFMAVIY 374 Query: 258 LGLAFPYHHWTTPGNH 305 L PY + + H Sbjct: 375 LVAGIPYSWYWSKHEH 390 Score = 26.2 bits (56), Expect(2) = 8e-13 Identities = 9/13 (69%), Positives = 11/13 (84%) Frame = +2 Query: 8 WFLLDIAFYSQNL 46 WFL+DI FY+ NL Sbjct: 293 WFLVDIVFYTSNL 305
>PHT19_ARATH (Q9S735) Inorganic phosphate transporter 1-9 (AtPht1;9) (H(+)/Pi| cotransporter) Length = 532 Score = 61.6 bits (148), Expect(2) = 5e-12 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Frame = +3 Query: 111 EEVHRIARAQTLIALCGTXPGYWFTVALIDRIGRXWIQLGGFFFMAVFMLGLAFPYH-HW 287 + +A+ ++A C T PGYWFTV ID+IGR IQ+ GFF MAV L PY +W Sbjct: 336 DSAFEVAKLAAIVAACSTIPGYWFTVYFIDKIGRVKIQMMGFFLMAVVYLVAGIPYSWYW 395 Query: 288 T 290 + Sbjct: 396 S 396 Score = 26.6 bits (57), Expect(2) = 5e-12 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +2 Query: 8 WFLLDIAFYSQNLXQKDILH 67 WFL+D+ FY+ NL I + Sbjct: 304 WFLVDVVFYTSNLLLSQIFN 323
>YAEC_SCHPO (Q09852) Putative inorganic phosphate transporter C23D3.12| Length = 559 Score = 52.8 bits (125), Expect(2) = 9e-11 Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 3/69 (4%) Frame = +3 Query: 102 SALEEVHRIARA---QTLIALCGTXPGYWFTVALIDRIGRXWIQLGGFFFMAVFMLGLAF 272 S E H + R +IA+ G PGYWFTV L++++GR WIQL G F + LA Sbjct: 369 SGKNEYHTLMRGAIGNLIIAIAGYVPGYWFTVFLVEKLGRKWIQLQGLFITGLMFAILAG 428 Query: 273 PYHHWTTPG 299 + +T G Sbjct: 429 SWDTISTGG 437 Score = 31.2 bits (69), Expect(2) = 9e-11 Identities = 14/19 (73%), Positives = 14/19 (73%) Frame = +2 Query: 8 WFLLDIAFYSQNLXQKDIL 64 WFLLDIAFY NL Q IL Sbjct: 344 WFLLDIAFYGVNLNQSVIL 362
>YHD1_SCHPO (Q9P6J9) Putative inorganic phosphate transporter C1683.01| Length = 573 Score = 47.8 bits (112), Expect(2) = 3e-10 Identities = 22/52 (42%), Positives = 31/52 (59%) Frame = +3 Query: 144 LIALCGTXPGYWFTVALIDRIGRXWIQLGGFFFMAVFMLGLAFPYHHWTTPG 299 +IA+ G PGYWF V L++ +GR WIQL GF + LA ++ +T G Sbjct: 398 IIAVAGYVPGYWFNVFLVEILGRKWIQLQGFVITGLMFAILAGRWNEISTGG 449 Score = 34.7 bits (78), Expect(2) = 3e-10 Identities = 15/20 (75%), Positives = 15/20 (75%) Frame = +2 Query: 5 CWFLLDIAFYSQNLXQKDIL 64 CWFLLDIAFY NL Q IL Sbjct: 355 CWFLLDIAFYGVNLNQSVIL 374
>YBN1_SCHPO (O42885) Putative inorganic phosphate transporter C8E4.01c| Length = 572 Score = 47.8 bits (112), Expect(2) = 3e-10 Identities = 22/52 (42%), Positives = 31/52 (59%) Frame = +3 Query: 144 LIALCGTXPGYWFTVALIDRIGRXWIQLGGFFFMAVFMLGLAFPYHHWTTPG 299 +IA+ G PGYWF V L++ +GR WIQL GF + LA ++ +T G Sbjct: 397 IIAVAGYVPGYWFNVFLVEILGRKWIQLQGFVITGLMFAILAGRWNEISTGG 448 Score = 34.7 bits (78), Expect(2) = 3e-10 Identities = 15/20 (75%), Positives = 15/20 (75%) Frame = +2 Query: 5 CWFLLDIAFYSQNLXQKDIL 64 CWFLLDIAFY NL Q IL Sbjct: 354 CWFLLDIAFYGVNLNQSVIL 373
>PHO84_YEAST (P25297) Inorganic phosphate transporter PHO84| Length = 587 Score = 45.1 bits (105), Expect(2) = 1e-06 Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 1/47 (2%) Frame = +3 Query: 144 LIALC-GTXPGYWFTVALIDRIGRXWIQLGGFFFMAVFMLGLAFPYH 281 LI +C G+ PGYW +V +D IGR IQL GF + + F YH Sbjct: 395 LILICAGSLPGYWVSVFTVDIIGRKPIQLAGFIILTALFCVIGFAYH 441 Score = 24.6 bits (52), Expect(2) = 1e-06 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +2 Query: 8 WFLLDIAFYSQNLXQKDIL 64 WF LD+AFY +L IL Sbjct: 354 WFTLDVAFYGLSLNSAVIL 372
>HGT1_CANAL (O74713) High-affinity glucose transporter| Length = 545 Score = 31.2 bits (69), Expect = 0.69 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = +3 Query: 138 QTLIALCGTXPGYWFTVALIDRIGRXWIQLGGFFFMAVFMLGLA 269 Q +I C T P +F ID++GR + +GG M F GLA Sbjct: 322 QYVINTCVTVPALYF----IDKVGRRPLLIGGATMMMAFQFGLA 361
>YCEI_BACSU (O34691) Hypothetical metabolite transport protein yceI| Length = 400 Score = 30.0 bits (66), Expect = 1.5 Identities = 16/70 (22%), Positives = 28/70 (40%) Frame = +3 Query: 60 YFTAINWIPKAKTMSALEEVHRIARAQTLIALCGTXPGYWFTVALIDRIGRXWIQLGGFF 239 Y+ W+P + + L+ PGY+ LI++ GR WI Sbjct: 231 YYGMFLWLPSVMLLKGFSMIQSFE--YVLLMTLAQLPGYFSAAWLIEKAGRKWI------ 282 Query: 240 FMAVFMLGLA 269 + V+++G A Sbjct: 283 -LVVYLIGTA 291
>YL32_CAEEL (P34423) Hypothetical protein F44B9.2| Length = 503 Score = 29.3 bits (64), Expect = 2.6 Identities = 12/38 (31%), Positives = 25/38 (65%) Frame = -2 Query: 305 VVARGRPVVVREGQPQHEHRHEEESAELDPXAPDPVDE 192 V A+ +V +E + + + ++++ SA+LDP P+ VD+ Sbjct: 116 VEAKQNVIVEKENEIKDQQQNDQLSAKLDPKTPNSVDD 153
>ARAE_BACSU (P96710) Arabinose-proton symporter (Arabinose transporter)| Length = 464 Score = 28.9 bits (63), Expect = 3.4 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +3 Query: 186 VALIDRIGRXWIQLGGFFFMAVFMLGLAFPYHHWTTPG 299 V LID++GR + G FMA+FM+ + ++ T G Sbjct: 322 VLLIDKVGRKKLMSIGSAFMAIFMILIGTSFYFELTSG 359
>TLK1_MOUSE (Q8C0V0) Serine/threonine-protein kinase tousled-like 1 (EC| 2.7.11.1) (Tousled-like kinase 1) Length = 766 Score = 28.1 bits (61), Expect = 5.9 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = -2 Query: 296 RGRPVVVREGQPQHEHRHEEESAELDPXAPDPVDEGHGE 180 RG P +R PQ+ H H S+ + P +P P G+ Sbjct: 162 RGIPPAIRS--PQNSHSHSTPSSSVRPNSPSPTALAFGD 198
>TLK1_HUMAN (Q9UKI8) Serine/threonine-protein kinase tousled-like 1 (EC| 2.7.11.1) (Tousled-like kinase 1) (PKU-beta) Length = 766 Score = 28.1 bits (61), Expect = 5.9 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = -2 Query: 296 RGRPVVVREGQPQHEHRHEEESAELDPXAPDPVDEGHGE 180 RG P +R PQ+ H H S+ + P +P P G+ Sbjct: 162 RGIPPAIRS--PQNSHSHSTPSSSVRPNSPSPTALAFGD 198
>SOX17_HUMAN (Q9H6I2) Transcription factor SOX-17| Length = 414 Score = 28.1 bits (61), Expect = 5.9 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = -2 Query: 266 QPQHEHRHEEESAELDPXAPDPVDE 192 QPQH+H+H+ + P P P E Sbjct: 314 QPQHQHQHQHQHHPPGPGQPSPPPE 338
>GUAA_CHLTE (Q8KFZ5) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 516 Score = 28.1 bits (61), Expect = 5.9 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +3 Query: 75 NWIPKAKTMSALEEVHRIARAQTLIALCGTXPGYWFTVALI 197 +W PK+ +EE+ R+A T++ CG G TVA + Sbjct: 203 DWSPKSFIQHQIEEIKRVAGDSTVV--CGISGGVDSTVAAV 241
>Y1104_HAEIN (P71369) Hypothetical metabolite transport protein HI1104| Length = 407 Score = 28.1 bits (61), Expect = 5.9 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 4/42 (9%) Frame = +3 Query: 141 TLIALCGTXPGYWFTVALIDRIGR----XWIQLGGFFFMAVF 254 T + +CG G W L DRIGR QLG + V+ Sbjct: 264 TAVTVCGMMAGIWIFGQLADRIGRKPSFLLFQLGAVISIVVY 305
>CLR59_PONPY (Q5R686) Cytoplasmic linker protein 170-related 59 kDa protein| (CLIPR-59) (CLIP-170-related 59 kDa protein) Length = 547 Score = 27.7 bits (60), Expect = 7.7 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -2 Query: 263 PQHEHRHEEESAELDPXAPDPVDEGHGEPV 174 P+ E EEE E P AP P E +PV Sbjct: 13 PRGEEEEEEEEDEPVPEAPSPTQERRQKPV 42
>CLR59_HUMAN (Q96DZ5) Cytoplasmic linker protein 170-related 59 kDa protein| (CLIPR-59) (CLIP-170-related 59 kDa protein) Length = 547 Score = 27.7 bits (60), Expect = 7.7 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = -2 Query: 263 PQHEHRHEEESAELDPXAPDPVDEGHGEPV 174 P+ E EEE E P AP P E +PV Sbjct: 13 PRGEEEEEEEEDEPVPEAPSPTQERRQKPV 42 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.129 0.487 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,950,639 Number of Sequences: 219361 Number of extensions: 528216 Number of successful extensions: 1935 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 1861 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1929 length of database: 80,573,946 effective HSP length: 77 effective length of database: 63,683,149 effective search space used: 1528395576 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
