| Clone Name | basd22l05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_476990.1| Oryza sativa (japonica cultivar-group), mRNA Length = 987 Score = 299 bits (151), Expect = 6e-78 Identities = 214/235 (91%) Strand = Plus / Plus Query: 329 gcggcctaggccgccggagttgccgctgttcctccctggcatggtggtgctcgtcaagaa 388 |||||| ||| |||||||| |||||||||||||||| || |||||||||||||||||||| Sbjct: 454 gcggccgagggcgccggagctgccgctgttcctccccgggatggtggtgctcgtcaagaa 513 Query: 389 ccccaacaacgcgtaccacatgtactgcggcatcgtgcagcgcgtcaccgatgggaaggt 448 |||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 514 ccccaacaacgcctaccacatgtactgcggcatcgtgcagcgcgtcaccgacggcaaggt 573 Query: 449 gggggtgctgttcgagggcgggaactgggataggctcatcaccttcggcgtcgacgagct 508 ||||||||||||||||| |||| |||||| |||||||||||||||| |||||||||| Sbjct: 574 cggggtgctgttcgagggggggatctgggacaggctcatcaccttcgatctcgacgagct 633 Query: 509 cgagggccgggagaagggcccgcccatggtgaaccccaagtcggtcgtgctcgag 563 |||||| |||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 634 cgaggggagggagaagggcccgcccatggtgaaccctaagtccgtgctgctcgag 688 Score = 170 bits (86), Expect = 4e-39 Identities = 98/102 (96%) Strand = Plus / Plus Query: 170 ggtggacccggacgcgttcgagaaggagatgatgggcctcacgggcggcttccccggcgg 229 ||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 304 ggtggacccggacgcgttcgacaaggagatgatgggcctcaccggcggattccccggcgg 363 Query: 230 cgaggtcgggctcaaggacttcgtcgccaagaacccgcctcc 271 ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 364 cgaggtcggcctcaaggacttcgtcgccaagaacccgcctcc 405 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 34 tcctcggtggccgcggcctctgcaacggcgagatcggcatccgcaaggagctc 86 ||||||| ||||| || ||||||||||||||| |||||||||||||||||||| Sbjct: 162 tcctcggcggccggggtctctgcaacggcgaggtcggcatccgcaaggagctc 214
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 299 bits (151), Expect = 6e-78 Identities = 214/235 (91%) Strand = Plus / Minus Query: 329 gcggcctaggccgccggagttgccgctgttcctccctggcatggtggtgctcgtcaagaa 388 |||||| ||| |||||||| |||||||||||||||| || |||||||||||||||||||| Sbjct: 5248714 gcggccgagggcgccggagctgccgctgttcctccccgggatggtggtgctcgtcaagaa 5248655 Query: 389 ccccaacaacgcgtaccacatgtactgcggcatcgtgcagcgcgtcaccgatgggaaggt 448 |||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 5248654 ccccaacaacgcctaccacatgtactgcggcatcgtgcagcgcgtcaccgacggcaaggt 5248595 Query: 449 gggggtgctgttcgagggcgggaactgggataggctcatcaccttcggcgtcgacgagct 508 ||||||||||||||||| |||| |||||| |||||||||||||||| |||||||||| Sbjct: 5248594 cggggtgctgttcgagggggggatctgggacaggctcatcaccttcgatctcgacgagct 5248535 Query: 509 cgagggccgggagaagggcccgcccatggtgaaccccaagtcggtcgtgctcgag 563 |||||| |||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 5248534 cgaggggagggagaagggcccgcccatggtgaaccctaagtccgtgctgctcgag 5248480 Score = 170 bits (86), Expect = 4e-39 Identities = 98/102 (96%) Strand = Plus / Minus Query: 170 ggtggacccggacgcgttcgagaaggagatgatgggcctcacgggcggcttccccggcgg 229 ||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 5248864 ggtggacccggacgcgttcgacaaggagatgatgggcctcaccggcggattccccggcgg 5248805 Query: 230 cgaggtcgggctcaaggacttcgtcgccaagaacccgcctcc 271 ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 5248804 cgaggtcggcctcaaggacttcgtcgccaagaacccgcctcc 5248763 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 34 tcctcggtggccgcggcctctgcaacggcgagatcggcatccgcaaggagctc 86 ||||||| ||||| || ||||||||||||||| |||||||||||||||||||| Sbjct: 5249006 tcctcggcggccggggtctctgcaacggcgaggtcggcatccgcaaggagctc 5248954 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 51 ctctgcaacggcgagatcggcatccgcaaggagctc 86 ||||||||||||||| ||||||||| |||||||||| Sbjct: 8892122 ctctgcaacggcgaggtcggcatccacaaggagctc 8892157
>dbj|AP003848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1715_A07 Length = 130907 Score = 299 bits (151), Expect = 6e-78 Identities = 214/235 (91%) Strand = Plus / Minus Query: 329 gcggcctaggccgccggagttgccgctgttcctccctggcatggtggtgctcgtcaagaa 388 |||||| ||| |||||||| |||||||||||||||| || |||||||||||||||||||| Sbjct: 115428 gcggccgagggcgccggagctgccgctgttcctccccgggatggtggtgctcgtcaagaa 115369 Query: 389 ccccaacaacgcgtaccacatgtactgcggcatcgtgcagcgcgtcaccgatgggaaggt 448 |||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 115368 ccccaacaacgcctaccacatgtactgcggcatcgtgcagcgcgtcaccgacggcaaggt 115309 Query: 449 gggggtgctgttcgagggcgggaactgggataggctcatcaccttcggcgtcgacgagct 508 ||||||||||||||||| |||| |||||| |||||||||||||||| |||||||||| Sbjct: 115308 cggggtgctgttcgagggggggatctgggacaggctcatcaccttcgatctcgacgagct 115249 Query: 509 cgagggccgggagaagggcccgcccatggtgaaccccaagtcggtcgtgctcgag 563 |||||| |||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 115248 cgaggggagggagaagggcccgcccatggtgaaccctaagtccgtgctgctcgag 115194 Score = 170 bits (86), Expect = 4e-39 Identities = 98/102 (96%) Strand = Plus / Minus Query: 170 ggtggacccggacgcgttcgagaaggagatgatgggcctcacgggcggcttccccggcgg 229 ||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 115578 ggtggacccggacgcgttcgacaaggagatgatgggcctcaccggcggattccccggcgg 115519 Query: 230 cgaggtcgggctcaaggacttcgtcgccaagaacccgcctcc 271 ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 115518 cgaggtcggcctcaaggacttcgtcgccaagaacccgcctcc 115477 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 34 tcctcggtggccgcggcctctgcaacggcgagatcggcatccgcaaggagctc 86 ||||||| ||||| || ||||||||||||||| |||||||||||||||||||| Sbjct: 115720 tcctcggcggccggggtctctgcaacggcgaggtcggcatccgcaaggagctc 115668
>dbj|AP004379.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0589E08 Length = 138416 Score = 299 bits (151), Expect = 6e-78 Identities = 214/235 (91%) Strand = Plus / Minus Query: 329 gcggcctaggccgccggagttgccgctgttcctccctggcatggtggtgctcgtcaagaa 388 |||||| ||| |||||||| |||||||||||||||| || |||||||||||||||||||| Sbjct: 47477 gcggccgagggcgccggagctgccgctgttcctccccgggatggtggtgctcgtcaagaa 47418 Query: 389 ccccaacaacgcgtaccacatgtactgcggcatcgtgcagcgcgtcaccgatgggaaggt 448 |||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 47417 ccccaacaacgcctaccacatgtactgcggcatcgtgcagcgcgtcaccgacggcaaggt 47358 Query: 449 gggggtgctgttcgagggcgggaactgggataggctcatcaccttcggcgtcgacgagct 508 ||||||||||||||||| |||| |||||| |||||||||||||||| |||||||||| Sbjct: 47357 cggggtgctgttcgagggggggatctgggacaggctcatcaccttcgatctcgacgagct 47298 Query: 509 cgagggccgggagaagggcccgcccatggtgaaccccaagtcggtcgtgctcgag 563 |||||| |||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 47297 cgaggggagggagaagggcccgcccatggtgaaccctaagtccgtgctgctcgag 47243 Score = 170 bits (86), Expect = 4e-39 Identities = 98/102 (96%) Strand = Plus / Minus Query: 170 ggtggacccggacgcgttcgagaaggagatgatgggcctcacgggcggcttccccggcgg 229 ||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 47627 ggtggacccggacgcgttcgacaaggagatgatgggcctcaccggcggattccccggcgg 47568 Query: 230 cgaggtcgggctcaaggacttcgtcgccaagaacccgcctcc 271 ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 47567 cgaggtcggcctcaaggacttcgtcgccaagaacccgcctcc 47526 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 34 tcctcggtggccgcggcctctgcaacggcgagatcggcatccgcaaggagctc 86 ||||||| ||||| || ||||||||||||||| |||||||||||||||||||| Sbjct: 47769 tcctcggcggccggggtctctgcaacggcgaggtcggcatccgcaaggagctc 47717
>dbj|AK070765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023071P20, full insert sequence Length = 987 Score = 291 bits (147), Expect = 1e-75 Identities = 213/235 (90%) Strand = Plus / Plus Query: 329 gcggcctaggccgccggagttgccgctgttcctccctggcatggtggtgctcgtcaagaa 388 |||||| ||| |||||||| |||||||||||||||| || |||||||| ||||||||||| Sbjct: 454 gcggccgagggcgccggagctgccgctgttcctccccgggatggtggtactcgtcaagaa 513 Query: 389 ccccaacaacgcgtaccacatgtactgcggcatcgtgcagcgcgtcaccgatgggaaggt 448 |||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 514 ccccaacaacgcctaccacatgtactgcggcatcgtgcagcgcgtcaccgacggcaaggt 573 Query: 449 gggggtgctgttcgagggcgggaactgggataggctcatcaccttcggcgtcgacgagct 508 ||||||||||||||||| |||| |||||| |||||||||||||||| |||||||||| Sbjct: 574 cggggtgctgttcgagggggggatctgggacaggctcatcaccttcgatctcgacgagct 633 Query: 509 cgagggccgggagaagggcccgcccatggtgaaccccaagtcggtcgtgctcgag 563 |||||| |||||||||||||||||||||||||||| ||||| || |||||||| Sbjct: 634 cgaggggagggagaagggcccgcccatggtgaaccctaagtccgtgctgctcgag 688 Score = 170 bits (86), Expect = 4e-39 Identities = 98/102 (96%) Strand = Plus / Plus Query: 170 ggtggacccggacgcgttcgagaaggagatgatgggcctcacgggcggcttccccggcgg 229 ||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 304 ggtggacccggacgcgttcgacaaggagatgatgggcctcaccggcggattccccggcgg 363 Query: 230 cgaggtcgggctcaaggacttcgtcgccaagaacccgcctcc 271 ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 364 cgaggtcggcctcaaggacttcgtcgccaagaacccgcctcc 405 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 34 tcctcggtggccgcggcctctgcaacggcgagatcggcatccgcaaggagctc 86 ||||||| ||||| || ||||||||||||||| |||||||||||||||||||| Sbjct: 162 tcctcggcggccggggtctctgcaacggcgaggtcggcatccgcaaggagctc 214
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 386 gaaccccaacaacgcgtaccacatgtactgcggcatcgtgcagcgcgtcacc 437 ||||||||||||| | ||||||||||||| ||| |||||||||||| ||||| Sbjct: 60171 gaaccccaacaacacctaccacatgtactacgggatcgtgcagcgcatcacc 60222 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 54 tgcaacggcgagatcggcatccgcaaggagctc 86 ||||||| |||| |||||||||||||||||||| Sbjct: 59848 tgcaacgacgaggtcggcatccgcaaggagctc 59880 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 186 ttcgagaaggagatgatgggcctcac 211 |||||||||||||||||||| ||||| Sbjct: 59980 ttcgagaaggagatgatggggctcac 60005
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 386 gaaccccaacaacgcgtaccacatgtactgcggcatcgtgcagcgcgtcacc 437 ||||||||||||| | ||||||||||||| ||| |||||||||||| ||||| Sbjct: 22464924 gaaccccaacaacacctaccacatgtactacgggatcgtgcagcgcatcacc 22464975 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 54 tgcaacggcgagatcggcatccgcaaggagctc 86 ||||||| |||| |||||||||||||||||||| Sbjct: 22464601 tgcaacgacgaggtcggcatccgcaaggagctc 22464633 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 186 ttcgagaaggagatgatgggcctcac 211 |||||||||||||||||||| ||||| Sbjct: 22464733 ttcgagaaggagatgatggggctcac 22464758
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 386 gaaccccaacaacgcgtaccacatgtactgcggcatcgtgcagcgcgtcacc 437 ||||||||||||| | ||||||||||||| ||| |||||||||||| ||||| Sbjct: 22457953 gaaccccaacaacacctaccacatgtactacgggatcgtgcagcgcatcacc 22458004 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 54 tgcaacggcgagatcggcatccgcaaggagctc 86 ||||||| |||| |||||||||||||||||||| Sbjct: 22457630 tgcaacgacgaggtcggcatccgcaaggagctc 22457662 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 186 ttcgagaaggagatgatgggcctcac 211 |||||||||||||||||||| ||||| Sbjct: 22457762 ttcgagaaggagatgatggggctcac 22457787
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 50 cctctgcaacggcgagatcggcatccgcaaggagctc 86 ||||||||| |||||||||||||||||||||||||| Sbjct: 4438500 cctctgcaatagcgagatcggcatccgcaaggagctc 4438464 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ccggcggcgaggtcgggctc 242 |||||||||||||||||||| Sbjct: 27177232 ccggcggcgaggtcgggctc 27177213
>dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0005A05 Length = 162520 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 50 cctctgcaacggcgagatcggcatccgcaaggagctc 86 ||||||||| |||||||||||||||||||||||||| Sbjct: 33230 cctctgcaatagcgagatcggcatccgcaaggagctc 33194
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 50 cctctgcaacggcgagatcggcatccgcaaggagctc 86 ||||||||| |||||||||||||||||||||||||| Sbjct: 86181 cctctgcaatagcgagatcggcatccgcaaggagctc 86145
>ref|NM_186900.1| Oryza sativa (japonica cultivar-group), mRNA Length = 726 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 51 ctctgcaacggcgagatcggcatccgcaaggagctc 86 ||||||||||||||| ||||||||| |||||||||| Sbjct: 584 ctctgcaacggcgaggtcggcatccacaaggagctc 549
>dbj|AP004176.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1057_E05 Length = 103229 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 51 ctctgcaacggcgagatcggcatccgcaaggagctc 86 ||||||||||||||| ||||||||| |||||||||| Sbjct: 18279 ctctgcaacggcgaggtcggcatccacaaggagctc 18314
>dbj|AP005051.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0458G06 Length = 139109 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 51 ctctgcaacggcgagatcggcatccgcaaggagctc 86 ||||||||||||||| ||||||||| |||||||||| Sbjct: 122222 ctctgcaacggcgaggtcggcatccacaaggagctc 122257
>gb|AC139348.4| Mus musculus BAC clone RP24-336F19 from chromosome 18, complete sequence Length = 145012 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 600 gagaagaagaaggaagaggaaga 622 ||||||||||||||||||||||| Sbjct: 49637 gagaagaagaaggaagaggaaga 49615
>emb|AL358876.11| Human DNA sequence from clone RP11-431K24 on chromosome 1 Contains the 3' end of a novel gene (FLJ26758), a 52kDa eukaryotic translation initiation factor 2 subunit 3 gamma (EIF2S3) pseudogene and two novel genes, complete sequence Length = 171183 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagaggaaga 622 ||||||||||||||||||||||| Sbjct: 42921 gagaagaagaaggaagaggaaga 42943
>emb|AL139417.9| Human DNA sequence from clone RP1-59H12 on chromosome 1q21.1-21.3 Contains the SPRR2B gene for small proline-rich protein 2B, the SPRR2E gene for small proline-rich protein 2E and the SPRR2F gene for small proline-rich protein 2F, complete sequence Length = 51059 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagaggaaga 622 ||||||||||||||||||||||| Sbjct: 26444 gagaagaagaaggaagaggaaga 26466
>gb|AC157924.6| Mus musculus chromosome 1, clone RP23-18J18, complete sequence Length = 206156 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagaggaaga 622 ||||||||||||||||||||||| Sbjct: 171081 gagaagaagaaggaagaggaaga 171103
>gb|AC020552.4|AC020552 Homo sapiens BAC clone RP11-431K24 from 1, complete sequence Length = 178820 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagaggaaga 622 ||||||||||||||||||||||| Sbjct: 42921 gagaagaagaaggaagaggaaga 42943
>ref|NM_101953.3| Arabidopsis thaliana binding AT1G21000 mRNA, complete cds Length = 1273 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 54 agaagaagaaggaagaggaaga 33
>gb|AC165958.2| Mus musculus BAC clone RP23-417I20 from chromosome 16, complete sequence Length = 186202 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 51491 agaagaagaaggaagaggaaga 51512
>gb|AC009388.5| Drosophila melanogaster clone BACR11P22, complete sequence Length = 172362 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 576 gccatggacgaggacgaggtgg 597 |||||||||||||||||||||| Sbjct: 75636 gccatggacgaggacgaggtgg 75657 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 576 gccatggacgaggacgaggtgg 597 |||||||||||||||||||||| Sbjct: 72990 gccatggacgaggacgaggtgg 73011
>gb|AC169508.1| Mus musculus BAC clone RP23-167I21 from chromosome 16, complete sequence Length = 211870 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 4013 agaagaagaaggaagaggaaga 4034
>gb|U23857.1|HPU23857 Cercopithecine herpesvirus 12 BRRF2-like protein gene, partial cds; EBNA1, BKRF2-like protein, and BKRF3-like protein genes, complete cds; and BKRF4-like protein gene, partial cds Length = 3222 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 573 gaggccatggacgaggacgagg 594 |||||||||||||||||||||| Sbjct: 409 gaggccatggacgaggacgagg 430
>ref|XM_361423.1| Magnaporthe grisea 70-15 hypothetical protein (MG03897.4) partial mRNA Length = 2016 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 581 ggacgaggacgaggtggccgag 602 |||||||||||||||||||||| Sbjct: 1927 ggacgaggacgaggtggccgag 1948
>gb|AC147132.3| Mus musculus BAC clone RP24-189K3 from chromosome 7, complete sequence Length = 189225 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 62885 agaagaagaaggaagaggaaga 62864
>gb|AC161056.5| Mus musculus BAC clone RP23-241J7 from chromosome 3, complete sequence Length = 226878 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 104852 agaagaagaaggaagaggaaga 104873
>gb|AC004895.2| Homo sapiens PAC clone RP4-810E6 from 7, complete sequence Length = 152927 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 104146 agaagaagaaggaagaggaaga 104167
>gb|AC123847.4| Mus musculus BAC clone RP23-443O1 from chromosome 3, complete sequence Length = 189689 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 175751 agaagaagaaggaagaggaaga 175772
>ref|XM_382636.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02460.1) partial mRNA Length = 3951 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 3836 agaagaagaaggaagaggaaga 3857
>gb|AC125456.4| Mus musculus BAC clone RP24-193M20 from chromosome 18, complete sequence Length = 142347 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 38882 agaagaagaaggaagaggaaga 38903
>gb|AC123041.2| Mus musculus BAC clone RP24-545E4 from 3, complete sequence Length = 191533 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 77637 agaagaagaaggaagaggaaga 77658
>ref|XM_759541.1| Theileria parva strain Muguga hypothetical protein (TP02_0065) partial mRNA Length = 819 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagaggaag 621 |||||||||||||||||||||| Sbjct: 493 gagaagaagaaggaagaggaag 514
>gb|AC147635.4| Mus musculus BAC clone RP23-290C4 from chromosome 3, complete sequence Length = 213637 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 49272 agaagaagaaggaagaggaaga 49251
>gb|AC158960.4| Mus musculus chromosome 1, clone RP23-315O2, complete sequence Length = 176947 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 49068 agaagaagaaggaagaggaaga 49047
>emb|AL008725.1|HS148E22 Human DNA sequence from clone RP1-148E22 on chromosome 20q12-13.12 Contains the YWHAB gene for tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta polypeptide, the 5' end of the C20orf119 gene for chromosome 20 open reading frame 119 and two CpG islands, complete sequence Length = 79227 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 11946 agaagaagaaggaagaggaaga 11967
>emb|AL606805.21| Mouse DNA sequence from clone RP23-449F16 on chromosome 11 Contains the 5' end of the Lpo gene for lactoperoxidase, a novel gene, the Epx gene for eosinophil peroxidase, the Olfr462, Olfr463 and Olfr464 genes for olfactory receptors 462, 463 and 464, a novel gene, a cytochrome c oxidase subunit VIc (Cox6c) pseudogene, a ubiquitin-conjugating enzyme E2B (S. cerevisiae RAD6 homology) (Ube2b) pseudogene and the 3' end of the gene for dynein light chain 2 (6720463E02Rik), complete sequence Length = 184069 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 87556 agaagaagaaggaagaggaaga 87535
>emb|AL670999.4| Mouse DNA sequence from clone RP23-168F16 on chromosome 4 Contains the (pseudo)gene for a novel protein similar to high-mobility group box 1 (Hmgb1), complete sequence Length = 226259 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 150341 agaagaagaaggaagaggaaga 150320
>emb|AL645904.13| Mouse DNA sequence from clone RP23-121P11 on chromosome 11 Contains the gene for a novel protein (1700121K02Rik), the Hnrph1 gene for heterogeneous nuclear ribonucleoprotein H1, the Rufy1 gene for RUN and FYVE domain containing 1, a novel pseudogene and three CpG islands, complete sequence Length = 193696 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 154153 agaagaagaaggaagaggaaga 154132
>emb|CR352264.6| Mouse DNA sequence from clone RP23-344N9 on chromosome 4 Contains a high mobility group box 1 (Hmgb1) pseudogene, complete sequence Length = 185595 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 109674 agaagaagaaggaagaggaaga 109653
>gb|AC036196.10| Homo sapiens chromosome 15, clone RP11-599A21, complete sequence Length = 180366 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 119546 agaagaagaaggaagaggaaga 119525
>ref|NM_170363.1| Drosophila melanogaster CG31054-PA (CG31054) mRNA, complete cds Length = 521 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 576 gccatggacgaggacgaggtgg 597 |||||||||||||||||||||| Sbjct: 264 gccatggacgaggacgaggtgg 285
>ref|NM_143348.2| Drosophila melanogaster CG4849-RA (CG4849), mRNA Length = 3130 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 576 gccatggacgaggacgaggtgg 597 |||||||||||||||||||||| Sbjct: 264 gccatggacgaggacgaggtgg 285
>gb|AY089551.1| Drosophila melanogaster LD28793 full insert cDNA Length = 3119 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 576 gccatggacgaggacgaggtgg 597 |||||||||||||||||||||| Sbjct: 243 gccatggacgaggacgaggtgg 264
>gb|AF375404.1| Arabidopsis thaliana At1g21000/F9H16_1 mRNA, complete cds Length = 1243 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 42 agaagaagaaggaagaggaaga 21
>dbj|AK148644.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120429L09 product:hypothetical protein, full insert sequence Length = 2406 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 2368 agaagaagaaggaagaggaaga 2389
>gb|AF428392.1|AF428392 Arabidopsis thaliana At1g21000/F9H16_1 mRNA, complete cds Length = 1240 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 38 agaagaagaaggaagaggaaga 17
>gb|AY696588.1| Pagrus major clone cm001045 microsatellite sequence Length = 645 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 284 agaagaagaaggaagaggaaga 263
>emb|BX816755.1|CNS0ABLT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZA02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1468 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 47 agaagaagaaggaagaggaaga 26
>emb|BX817483.1|CNS0AAIG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL26ZA07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1045 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 34 agaagaagaaggaagaggaaga 13
>emb|BX841858.1|CNS09Y3A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS91ZD07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 938 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 54 agaagaagaaggaagaggaaga 33
>gb|AC123690.19| Mus musculus chromosome 1, clone RP23-322M7, complete sequence Length = 191990 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 186992 agaagaagaaggaagaggaaga 186971
>gb|AY144884.1| Saccharomyces bayanus clone Contig2890 MNN4 gene, partial cds Length = 1130 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 769 agaagaagaaggaagaggaaga 790
>gb|BT003756.1| Drosophila melanogaster RE71343 full insert cDNA Length = 3136 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 576 gccatggacgaggacgaggtgg 597 |||||||||||||||||||||| Sbjct: 264 gccatggacgaggacgaggtgg 285
>gb|AY084849.1| Arabidopsis thaliana clone 119384 mRNA, complete sequence Length = 1235 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 38 agaagaagaaggaagaggaaga 17
>emb|AL672186.7| Mouse DNA sequence from clone RP23-42G2 on chromosome X, complete sequence Length = 205757 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 176325 agaagaagaaggaagaggaaga 176304
>gb|AE003763.3| Drosophila melanogaster chromosome 3R, section 101 of 118 of the complete sequence Length = 206189 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 576 gccatggacgaggacgaggtgg 597 |||||||||||||||||||||| Sbjct: 71412 gccatggacgaggacgaggtgg 71433 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 576 gccatggacgaggacgaggtgg 597 |||||||||||||||||||||| Sbjct: 68766 gccatggacgaggacgaggtgg 68787
>gb|AC132113.3| Mus musculus BAC clone RP24-217M2 from chromosome 3, complete sequence Length = 177519 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 105695 agaagaagaaggaagaggaaga 105674
>emb|AL928978.9| Mouse DNA sequence from clone RP23-95M7 on chromosome 2, complete sequence Length = 43342 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 17 agaagaagaaggaagaggaaga 38
>emb|AL669965.13| Mouse DNA sequence from clone RP23-186F24 on chromosome 4, complete sequence Length = 181196 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 24425 agaagaagaaggaagaggaaga 24446
>gb|AC132334.3| Mus musculus BAC clone RP24-228N8 from 6, complete sequence Length = 150109 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 119424 agaagaagaaggaagaggaaga 119445
>gb|AC123878.4| Mus musculus BAC clone RP23-318I20 from 3, complete sequence Length = 215121 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 102208 agaagaagaaggaagaggaaga 102187
>gb|AC149608.4| Mus musculus BAC clone RP23-436E6 from 8, complete sequence Length = 196473 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 117362 agaagaagaaggaagaggaaga 117383
>gb|AC123548.4| Mus musculus BAC clone RP23-441J16 from 6, complete sequence Length = 178488 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 22705 agaagaagaaggaagaggaaga 22726
>emb|AL954325.8| Mouse DNA sequence from clone RP23-416H10 on chromosome 2, complete sequence Length = 195457 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 193474 agaagaagaaggaagaggaaga 193495
>gb|AC007369.2| Arabidopsis thaliana chromosome I BAC F9H16 genomic sequence, complete sequence Length = 103192 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaaga 622 |||||||||||||||||||||| Sbjct: 10068 agaagaagaaggaagaggaaga 10089
>ref|NM_111326.1| Arabidopsis thaliana unknown protein AT3G04550 mRNA, complete cds Length = 1515 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaag 621 ||||||||||||||||||||| Sbjct: 866 agaagaagaaggaagaggaag 886
>gb|AC102908.11| Mus musculus chromosome 16, clone RP24-288K2, complete sequence Length = 174803 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 128666 ccgcctcctcctcccaagaga 128686
>ref|NM_111327.3| Arabidopsis thaliana unknown protein AT3G04560 mRNA, complete cds Length = 2212 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaag 621 ||||||||||||||||||||| Sbjct: 2043 agaagaagaaggaagaggaag 2023
>gb|AC132350.4| Mus musculus BAC clone RP24-95A6 from chromosome 6, complete sequence Length = 177167 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 135039 gaagaagaaggaagaggaaga 135059
>ref|XM_466796.1| Oryza sativa (japonica cultivar-group), mRNA Length = 705 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 580 tggacgaggacgaggtggccg 600 ||||||||||||||||||||| Sbjct: 512 tggacgaggacgaggtggccg 532
>ref|XM_450923.1| Oryza sativa (japonica cultivar-group), mRNA Length = 555 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 cttccccggcggcgaggtcgg 238 ||||||||||||||||||||| Sbjct: 360 cttccccggcggcgaggtcgg 340
>ref|XM_364518.1| Magnaporthe grisea 70-15 hypothetical protein (MG09408.4) partial mRNA Length = 1521 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaagac 623 ||||||||||||||||||||| Sbjct: 1240 aagaagaaggaagaggaagac 1260
>ref|XM_416698.1| PREDICTED: Gallus gallus similar to T-lymphoma invasion and metastasis inducing protein 1 (TIAM1 protein) (LOC418490), mRNA Length = 2680 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 1535 ccgcctcctcctcccaagaga 1515
>ref|XM_882213.1| PREDICTED: Bos taurus similar to Charged multivesicular body protein 4b (Chromatin modifying protein 4b) (CHMP4b), transcript variant 3 (LOC616164), mRNA Length = 1584 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaagac 623 ||||||||||||||||||||| Sbjct: 716 aagaagaaggaagaggaagac 736
>ref|XM_868997.1| PREDICTED: Bos taurus similar to Charged multivesicular body protein 4b (Chromatin modifying protein 4b) (CHMP4b), transcript variant 1 (LOC616164), mRNA Length = 1487 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaagac 623 ||||||||||||||||||||| Sbjct: 619 aagaagaaggaagaggaagac 639
>ref|XM_882188.1| PREDICTED: Bos taurus similar to Charged multivesicular body protein 4b (Chromatin modifying protein 4b) (CHMP4b), transcript variant 2 (LOC616164), mRNA Length = 1620 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaagac 623 ||||||||||||||||||||| Sbjct: 752 aagaagaaggaagaggaagac 772
>gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's Hospital Oakland Research Institute) complete sequence Length = 236662 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 46923 gaagaagaaggaagaggaaga 46943
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 208 tcacgggcggcttccccggcggcga 232 ||||||||||||||| ||||||||| Sbjct: 1717768 tcacgggcggcttccacggcggcga 1717792
>ref|XM_616649.2| PREDICTED: Bos taurus similar to T-lymphoma invasion and metastasis inducing protein 1 (TIAM1 protein) (LOC536517), mRNA Length = 5346 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 4587 ccgcctcctcctcccaagaga 4567
>gb|AC137150.11| Mus musculus chromosome 18, clone RP23-342A15, complete sequence Length = 213513 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 11479 gaagaagaaggaagaggaaga 11459
>gb|AC135104.22| Mus musculus strain C57BL/6J clone rp23-206l6, complete sequence Length = 198294 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 172905 gaagaagaaggaagaggaaga 172885
>gb|AC107837.11| Mus musculus chromosome 1, clone RP23-272H13, complete sequence Length = 189415 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 132528 gaagaagaaggaagaggaaga 132508
>gb|BC065126.1| Mus musculus T-cell lymphoma invasion and metastasis 1, mRNA (cDNA clone MGC:86168 IMAGE:30534934), complete cds Length = 5225 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 2760 ccgcctcctcctcccaagaga 2740
>gb|BC040748.1| Mus musculus T-cell lymphoma invasion and metastasis 1, mRNA (cDNA clone IMAGE:4035894), partial cds Length = 3030 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 567 ccgcctcctcctcccaagaga 547
>gb|AC011437.6|ATAC011437 Arabidopsis thaliana chromosome III BAC F7O18 genomic sequence, complete sequence Length = 95310 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaag 621 ||||||||||||||||||||| Sbjct: 5140 agaagaagaaggaagaggaag 5160
>gb|AC124178.3| Mus musculus BAC clone RP23-193J15 from 18, complete sequence Length = 206833 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 99887 gaagaagaaggaagaggaaga 99867
>gb|AC121932.2| Mus musculus BAC clone RP24-205N24 from 17, complete sequence Length = 152782 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 96958 gaagaagaaggaagaggaaga 96938
>gb|AC115885.29| Mus musculus chromosome 3, clone RP24-396D16, complete sequence Length = 186636 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 154604 gaagaagaaggaagaggaaga 154624
>emb|AL606500.8| Human DNA sequence from clone RP11-274N19 on chromosome 1 Contains the 3' end of the KCNN3 gene for potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3, a novel gene and the 5' end of the ADAR gene for adenosine deaminase, RNA-specific, complete sequence Length = 173014 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 169466 gaagaagaaggaagaggaaga 169486 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 169218 gaagaagaaggaagaggaaga 169238
>gb|AY063107.1| Arabidopsis thaliana unknown protein (At3g04550) mRNA, complete cds Length = 1381 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaag 621 ||||||||||||||||||||| Sbjct: 827 agaagaagaaggaagaggaag 847
>gb|AY034914.1| Arabidopsis thaliana unknown protein (At3g04550) mRNA, complete cds Length = 1532 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaag 621 ||||||||||||||||||||| Sbjct: 866 agaagaagaaggaagaggaag 886
>ref|NM_003253.1| Homo sapiens T-cell lymphoma invasion and metastasis 1 (TIAM1), mRNA Length = 5521 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 4817 ccgcctcctcctcccaagaga 4797
>dbj|AK124647.1| Homo sapiens cDNA FLJ42656 fis, clone BRALZ2000988 Length = 2948 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 565 ccgcctcctcctcccaagaga 545
>gb|AY114629.1| Arabidopsis thaliana unknown protein (At3g04550) mRNA, complete cds Length = 1403 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaag 621 ||||||||||||||||||||| Sbjct: 827 agaagaagaaggaagaggaag 847
>gb|AC147364.7| Medicago truncatula clone mth2-68g24, complete sequence Length = 109540 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaag 621 ||||||||||||||||||||| Sbjct: 103067 agaagaagaaggaagaggaag 103087
>dbj|AB190509.1| Rattus norvegicus mRNA for CSG260, partial cds Length = 236 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 175 ccgcctcctcctcccaagaga 155
>ref|NM_079755.1| Drosophila melanogaster Organic cation transporter CG6331-RA (Orct), mRNA Length = 2534 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 587 ggacgaggtggccgagaagaagaag 611 ||||||||||||||| ||||||||| Sbjct: 1597 ggacgaggtggccgaaaagaagaag 1621
>dbj|AK139485.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830098P14 product:Warning: possibly chimeric clone, full insert sequence Length = 4969 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 653 gaagaagaaggaagaggaaga 633
>dbj|AK136856.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330153L18 product:T-cell lymphoma invasion and metastasis 1, full insert sequence Length = 3569 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 1745 ccgcctcctcctcccaagaga 1725
>dbj|AK147392.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1028H05 product:T-cell lymphoma invasion and metastasis 1, full insert sequence Length = 7279 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 4813 ccgcctcctcctcccaagaga 4793
>ref|NM_009384.1| Mus musculus T-cell lymphoma invasion and metastasis 1 (Tiam1), mRNA Length = 7292 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 4850 ccgcctcctcctcccaagaga 4830
>dbj|AK159063.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530047L18 product:unclassifiable, full insert sequence Length = 2525 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 2377 gaagaagaaggaagaggaaga 2397
>gb|AY062440.1| Arabidopsis thaliana Unknown protein (At3g04550; F7O18.2) mRNA, complete cds Length = 1476 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaag 621 ||||||||||||||||||||| Sbjct: 856 agaagaagaaggaagaggaag 876
>dbj|AK162945.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330068G24 product:T-cell lymphoma invasion and metastasis 1, full insert sequence Length = 3497 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 1801 ccgcctcctcctcccaagaga 1781
>dbj|AK161477.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932429H17 product:T-cell lymphoma invasion and metastasis 1, full insert sequence Length = 3494 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 2154 ccgcctcctcctcccaagaga 2134
>dbj|AK163817.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130055L24 product:T-cell lymphoma invasion and metastasis 1, full insert sequence Length = 1466 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 334 ccgcctcctcctcccaagaga 314
>gb|AY058437.1| Drosophila melanogaster GH21655 full length cDNA Length = 2564 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 587 ggacgaggtggccgagaagaagaag 611 ||||||||||||||| ||||||||| Sbjct: 1597 ggacgaggtggccgaaaagaagaag 1621
>gb|AF336797.2|AF336797 Homo sapiens small-conductance calcium-activated potassium channel (KCNN3) gene, complete cds Length = 163217 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 115262 gaagaagaaggaagaggaaga 115242 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 114896 gaagaagaaggaagaggaaga 114876 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 114648 gaagaagaaggaagaggaaga 114628
>dbj|AK044430.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930012L18 product:unclassifiable, full insert sequence Length = 2368 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 1110 gaagaagaaggaagaggaaga 1090
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 cttccccggcggcgaggtcgg 238 ||||||||||||||||||||| Sbjct: 17581333 cttccccggcggcgaggtcgg 17581313
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 580 tggacgaggacgaggtggccg 600 ||||||||||||||||||||| Sbjct: 24720560 tggacgaggacgaggtggccg 24720540
>gb|AC105384.3| Homo sapiens BAC clone RP11-89B16 from 4, complete sequence Length = 155324 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaagacac 625 ||||||||||| ||||||||||||| Sbjct: 98293 agaagaagaagaaagaggaagacac 98317
>gb|AC008204.9|AC008204 Drosophila melanogaster, chromosome 3R, region 95E-95F, BAC clone BACR04E17, complete sequence Length = 199016 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 587 ggacgaggtggccgagaagaagaag 611 ||||||||||||||| ||||||||| Sbjct: 27312 ggacgaggtggccgaaaagaagaag 27336
>ref|XM_341556.2| PREDICTED: Rattus norvegicus UPF2 regulator of nonsense transcripts homolog (yeast) (predicted) (Upf2_predicted), mRNA Length = 1977 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 705 gaagaagaaggaagaggaaga 725
>ref|XM_221672.3| PREDICTED: Rattus norvegicus T-cell lymphoma invasion and metastasis 1 (predicted) (Tiam1_predicted), mRNA Length = 7927 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 5475 ccgcctcctcctcccaagaga 5455
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 556 tgctcgaggcgctcgtcgagg 576 ||||||||||||||||||||| Sbjct: 4855493 tgctcgaggcgctcgtcgagg 4855473 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 246 gacttcgtcgccaagaacccg 266 ||||||||||||||||||||| Sbjct: 2056396 gacttcgtcgccaagaacccg 2056376 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 239 gctcaaggacttcgtcgccaagaac 263 |||| |||||||||||||||||||| Sbjct: 378910 gctccaggacttcgtcgccaagaac 378886
>dbj|AP005676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1005_D12 Length = 150588 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 cttccccggcggcgaggtcgg 238 ||||||||||||||||||||| Sbjct: 30055 cttccccggcggcgaggtcgg 30035
>dbj|BS000110.1| Pan troglodytes chromosome 22 clone:PTB-090P24, map 22, complete sequences Length = 157686 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 67212 ccgcctcctcctcccaagaga 67232
>dbj|AP004059.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1372_D06 Length = 129242 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 580 tggacgaggacgaggtggccg 600 ||||||||||||||||||||| Sbjct: 101958 tggacgaggacgaggtggccg 101938
>dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1234_B11 Length = 128095 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 580 tggacgaggacgaggtggccg 600 ||||||||||||||||||||| Sbjct: 20208 tggacgaggacgaggtggccg 20188
>emb|AJ430047.1|MTR430047 Medicago truncatula mRNA for 1-deoxy-D-xylulose 5-phosphate synthase 1 (dxs1 gene) Length = 2302 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 601 agaagaagaaggaagaggaag 621 ||||||||||||||||||||| Sbjct: 95 agaagaagaaggaagaggaag 75
>ref|XM_321355.2| Anopheles gambiae str. PEST ENSANGP00000008498 (ENSANGG00000006399), partial mRNA Length = 3952 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 578 catggacgaggacgaggtggccgag 602 |||||||||||| |||||||||||| Sbjct: 444 catggacgaggatgaggtggccgag 420
>gb|AC124191.4| Mus musculus BAC clone RP23-275E4 from 18, complete sequence Length = 203003 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 49717 gaagaagaaggaagaggaaga 49737
>gb|AC007773.1|AC007773 Homo sapiens chromosome 19, BAC 275282 (CIT-B-325L16), complete sequence Length = 180316 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 129064 gaagaagaaggaagaggaaga 129084
>gb|AE003747.3| Drosophila melanogaster chromosome 3R, section 85 of 118 of the complete sequence Length = 206741 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 587 ggacgaggtggccgagaagaagaag 611 ||||||||||||||| ||||||||| Sbjct: 27568 ggacgaggtggccgaaaagaagaag 27592
>dbj|AP001710.1| Homo sapiens genomic DNA, chromosome 21q, section 54/105 Length = 340000 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 102825 ccgcctcctcctcccaagaga 102845
>emb|AJ870460.1| Saccharomyces cerevisiae 26S rRNA gene, isolate ABT507 Length = 1938 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 gagaagaagaaggaagaggaa 620 ||||||||||||||||||||| Sbjct: 661 gagaagaagaaggaagaggaa 641
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaag 621 ||||||||||||||||||||| Sbjct: 1429724 agaagaagaaggaagaggaag 1429744
>gb|AC122301.4| Mus musculus BAC clone RP23-276C6 from 10, complete sequence Length = 179801 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 gagaagaagaaggaagaggaa 620 ||||||||||||||||||||| Sbjct: 34558 gagaagaagaaggaagaggaa 34538
>emb|CT010496.14| Mouse DNA sequence from clone RP23-193I7 on chromosome 17, complete sequence Length = 209258 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 112160 gaagaagaaggaagaggaaga 112180
>gb|AC087840.16| Mus musculus strain C57BL/6J chromosome 16 clone rp23-240k10, complete sequence Length = 190761 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 80238 ccgcctcctcctcccaagaga 80258
>dbj|AB209101.1| Homo sapiens mRNA for T-cell lymphoma invasion and metastasis 1 variant protein Length = 4326 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 3830 ccgcctcctcctcccaagaga 3810
>gb|U16296.1|HSU16296 Human T-lymphoma invasion and metastasis inducing TIAM1 protein (TIAM1) mRNA, complete cds Length = 5521 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 4817 ccgcctcctcctcccaagaga 4797
>emb|AL645740.6| Mouse DNA sequence from clone RP23-411H13 on chromosome 4, complete sequence Length = 172665 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 45824 gaagaagaaggaagaggaaga 45804 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 45683 gaagaagaaggaagaggaaga 45663
>emb|AL645471.8| Mouse DNA sequence from clone RP23-456M3 on chromosome 11, complete sequence Length = 178361 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 gaagaagaaggaagaggaaga 622 ||||||||||||||||||||| Sbjct: 144905 gaagaagaaggaagaggaaga 144925
>emb|Y12400.1|DMORCT2 D.melanogaster mRNA for putative organic cation transporter, 2064 bp Length = 2064 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 587 ggacgaggtggccgagaagaagaag 611 ||||||||||||||| ||||||||| Sbjct: 1221 ggacgaggtggccgaaaagaagaag 1245
>emb|Y12399.1|DMORCT1 D.melanogaster mRNA for putative organic cation transporter, 2458 bp Length = 2458 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 587 ggacgaggtggccgagaagaagaag 611 ||||||||||||||| ||||||||| Sbjct: 908 ggacgaggtggccgaaaagaagaag 932
>gb|U05245.1|MMU05245 Mus musculus BALB/c invasion inducing protein (Tiam-1) mRNA, complete cds Length = 7292 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 4850 ccgcctcctcctcccaagaga 4830
>dbj|AP000246.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:B137B7, complete sequence Length = 94212 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 50942 ccgcctcctcctcccaagaga 50962
>dbj|AP000207.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone f43D11-119B8, segment 5/12, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 ccgcctcctcctcccaagaga 284 ||||||||||||||||||||| Sbjct: 76813 ccgcctcctcctcccaagaga 76833
>gb|AC108429.11| Mus musculus chromosome 7, clone RP23-161B5, complete sequence Length = 186903 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaa 620 |||||||||||||||||||| Sbjct: 50845 agaagaagaaggaagaggaa 50864
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 595 tggccgagaagaagaaggaa 614 |||||||||||||||||||| Sbjct: 3989192 tggccgagaagaagaaggaa 3989211
>ref|NM_122876.1| Arabidopsis thaliana nucleic acid binding AT5G34870 mRNA, complete cds Length = 1551 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 602 gaagaagaaggaagaggaag 621 |||||||||||||||||||| Sbjct: 760 gaagaagaaggaagaggaag 779
>ref|NM_117510.2| Arabidopsis thaliana ATP binding / microtubule motor AT4G14330 mRNA, complete cds Length = 2799 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 602 gaagaagaaggaagaggaag 621 |||||||||||||||||||| Sbjct: 1300 gaagaagaaggaagaggaag 1319
>ref|NM_117993.2| Arabidopsis thaliana MYB98; DNA binding / transcription factor AT4G18770 (MYB98) mRNA, complete cds Length = 2004 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 1152 gagaagaagaaggaagagga 1171
>ref|NM_106085.1| Arabidopsis thaliana heat shock protein binding / nucleic acid binding / unfolded protein binding / zinc ion binding AT1G74250 mRNA, complete cds Length = 1893 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 745 gagaagaagaaggaagagga 764
>gb|DQ198082.1| Arabidopsis thaliana myb family transcription factor (MYB98) mRNA, complete cds Length = 1284 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 1114 gagaagaagaaggaagagga 1133
>ref|XM_514865.1| PREDICTED: Pan troglodytes GC-rich sequence DNA-binding factor candidate (LOC458510), mRNA Length = 3385 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gggcggcttccccggcggcg 231 |||||||||||||||||||| Sbjct: 516 gggcggcttccccggcggcg 535
>ref|XM_531430.1| PREDICTED: Pan troglodytes similar to GC-rich sequence DNA-binding factor candidate isoform 4; GC-rich sequence DNA-binding factor candidate (LOC473960), mRNA Length = 1722 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gggcggcttccccggcggcg 231 |||||||||||||||||||| Sbjct: 516 gggcggcttccccggcggcg 535
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 568 tcgtcgaggccatggacgaggacg 591 ||||||||||||||||||| |||| Sbjct: 1055694 tcgtcgaggccatggacgatgacg 1055671
>gb|AC159412.1| Trypanosoma brucei chromosome 7 clone RPCI93-21H15, complete sequence Length = 159636 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagaggaagac 623 ||||||||||||||| |||||||| Sbjct: 86307 gagaagaagaaggaataggaagac 86330
>gb|AC158121.12| Mus musculus chromosome 5, clone RP23-440H19, complete sequence Length = 202895 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 15252 gagaagaagaaggaagagga 15233
>gb|BT018945.1| Zea mays clone Contig93.F mRNA sequence Length = 1119 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cttcgtcgccaagaacccgc 267 |||||||||||||||||||| Sbjct: 53 cttcgtcgccaagaacccgc 72
>gb|BC083396.1| Danio rerio zgc:103474, mRNA (cDNA clone MGC:103474 IMAGE:7237361), complete cds Length = 1455 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ccgccctcacctcctccgtc 118 |||||||||||||||||||| Sbjct: 479 ccgccctcacctcctccgtc 498
>gb|AY023133.1| Oryza sativa microsatellite MRG5458 containing (GCC)X8, closest to marker L655, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ccggcggcgaggtcgggctc 242 |||||||||||||||||||| Sbjct: 156 ccggcggcgaggtcgggctc 175
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 600 gagaagaagaaggaagaggaagac 623 ||||||||||||||| |||||||| Sbjct: 2020291 gagaagaagaaggaataggaagac 2020268
>gb|AC163338.5| Mus musculus BAC clone RP24-574A13 from chromosome 13, complete sequence Length = 149507 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 92 gcccaccccgccctcacctcctcc 115 |||||||| ||||||||||||||| Sbjct: 74486 gcccaccctgccctcacctcctcc 74463
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 gctcgaggcgctcgtcgagg 576 |||||||||||||||||||| Sbjct: 2423203 gctcgaggcgctcgtcgagg 2423184
>gb|AC138595.10| Mus musculus chromosome 1, clone RP24-286D13, complete sequence Length = 172490 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 48090 gagaagaagaaggaagagga 48109
>gb|AC096938.8| Rattus norvegicus 16 BAC CH230-49B24 (Children's Hospital Oakland Research Institute) complete sequence Length = 220401 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 100294 aagaagaaggaagaggaaga 100313
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 gctcgaggcgctcgtcgagg 576 |||||||||||||||||||| Sbjct: 3638349 gctcgaggcgctcgtcgagg 3638330
>gb|AC107763.25| Mus musculus chromosome 5, clone RP23-180F3, complete sequence Length = 219488 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 43427 gagaagaagaaggaagagga 43446
>gb|AC145557.3| Mus musculus BAC clone RP23-313I19 from chromosome 19, complete sequence Length = 226099 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 78490 aagaagaaggaagaggaaga 78471
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 571 tcgaggccatggacgaggacgagg 594 ||||||||||| |||||||||||| Sbjct: 1970759 tcgaggccatgcacgaggacgagg 1970782
>ref|NM_145328.1| Homo sapiens chromosome 21 open reading frame 66 (C21orf66), transcript variant 3, mRNA Length = 2920 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gggcggcttccccggcggcg 231 |||||||||||||||||||| Sbjct: 247 gggcggcttccccggcggcg 266
>ref|NM_016631.2| Homo sapiens chromosome 21 open reading frame 66 (C21orf66), transcript variant 1, mRNA Length = 2903 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gggcggcttccccggcggcg 231 |||||||||||||||||||| Sbjct: 247 gggcggcttccccggcggcg 266
>ref|NM_058191.2| Homo sapiens chromosome 21 open reading frame 66 (C21orf66), transcript variant 4, mRNA Length = 1429 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gggcggcttccccggcggcg 231 |||||||||||||||||||| Sbjct: 247 gggcggcttccccggcggcg 266
>ref|NM_013329.2| Homo sapiens chromosome 21 open reading frame 66 (C21orf66), transcript variant 2, mRNA Length = 2467 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gggcggcttccccggcggcg 231 |||||||||||||||||||| Sbjct: 247 gggcggcttccccggcggcg 266
>gb|AC148455.2| Xenopus tropicalis clone CH216-165I8, complete sequence Length = 170350 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 49361 gagaagaagaaggaagagga 49380
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 gcaacggcgagatcggcatc 74 |||||||||||||||||||| Sbjct: 1818711 gcaacggcgagatcggcatc 1818692
>gb|AC118639.12| Mus musculus chromosome 15, clone RP24-112I4, complete sequence Length = 166053 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 87818 gagaagaagaaggaagagga 87837
>gb|AC131756.3| Mus musculus BAC clone RP24-199J23 from chromosome 19, complete sequence Length = 175604 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 84842 aagaagaaggaagaggaaga 84823
>gb|AC117630.11| Mus musculus chromosome 9, clone RP23-181A16, complete sequence Length = 245165 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 163588 gagaagaagaaggaagagga 163569
>gb|AC073089.5| Homo sapiens BAC clone RP11-324F21 from 7, complete sequence Length = 171788 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 17047 aagaagaaggaagaggaaga 17028
>gb|AC132122.2| Mus musculus chromosome 7 clone RP24-78F23, complete sequence Length = 203549 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 139879 gagaagaagaaggaagagga 139898
>ref|XM_847128.1| PREDICTED: Canis familiaris similar to CG9047-PA, isoform A (LOC609791), mRNA Length = 654 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 31 aagaagaaggaagaggaaga 50
>gb|AC117058.19| Rattus norvegicus 16 BAC CH230-318I9 (Children's Hospital Oakland Research Institute) complete sequence Length = 181157 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 7995 aagaagaaggaagaggaaga 7976
>ref|XM_974268.1| PREDICTED: Mus musculus similar to Myosin light chain kinase 2, skeletal/cardiac muscle (MLCK2), transcript variant 1 (LOC669275), mRNA Length = 2935 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 595 tggccgagaagaagaaggaagagg 618 |||| ||||||||||||||||||| Sbjct: 846 tggcagagaagaagaaggaagagg 869
>ref|XM_974312.1| PREDICTED: Mus musculus similar to Myosin light chain kinase 2, skeletal/cardiac muscle (MLCK2), transcript variant 2 (LOC669275), mRNA Length = 2949 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 595 tggccgagaagaagaaggaagagg 618 |||| ||||||||||||||||||| Sbjct: 846 tggcagagaagaagaaggaagagg 869
>ref|XM_991707.1| PREDICTED: Mus musculus UPF2 regulator of nonsense transcripts homolog (yeast) (Upf2), mRNA Length = 5173 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 362 aagaagaaggaagaggaaga 381
>ref|XM_976588.1| PREDICTED: Mus musculus chromatin modifying protein 4B (Chmp4b), mRNA Length = 1482 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 646 aagaagaaggaagaggaaga 665
>ref|XM_905384.2| PREDICTED: Mus musculus myosin, light polypeptide kinase 2, skeletal muscle, transcript variant 1 (Mylk2), mRNA Length = 2931 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 595 tggccgagaagaagaaggaagagg 618 |||| ||||||||||||||||||| Sbjct: 846 tggcagagaagaagaaggaagagg 869
>ref|XM_974580.1| PREDICTED: Mus musculus myosin, light polypeptide kinase 2, skeletal muscle, transcript variant 2 (Mylk2), mRNA Length = 2945 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 595 tggccgagaagaagaaggaagagg 618 |||| ||||||||||||||||||| Sbjct: 846 tggcagagaagaagaaggaagagg 869
>ref|XM_001005681.1| PREDICTED: Mus musculus myosin, light polypeptide kinase 2, skeletal muscle (Mylk2), mRNA Length = 2934 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 595 tggccgagaagaagaaggaagagg 618 |||| ||||||||||||||||||| Sbjct: 846 tggcagagaagaagaaggaagagg 869
>ref|XM_920690.2| PREDICTED: Mus musculus UPF2 regulator of nonsense transcripts homolog (yeast), transcript variant 7 (Upf2), mRNA Length = 4418 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 362 aagaagaaggaagaggaaga 381
>ref|XM_920705.2| PREDICTED: Mus musculus UPF2 regulator of nonsense transcripts homolog (yeast), transcript variant 9 (Upf2), mRNA Length = 5174 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 362 aagaagaaggaagaggaaga 381
>ref|XM_908046.2| PREDICTED: Mus musculus UPF2 regulator of nonsense transcripts homolog (yeast), transcript variant 6 (Upf2), mRNA Length = 5730 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 918 aagaagaaggaagaggaaga 937
>ref|XM_898407.2| PREDICTED: Mus musculus UPF2 regulator of nonsense transcripts homolog (yeast), transcript variant 2 (Upf2), mRNA Length = 4418 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 362 aagaagaaggaagaggaaga 381
>ref|XM_140801.7| PREDICTED: Mus musculus UPF2 regulator of nonsense transcripts homolog (yeast), transcript variant 1 (Upf2), mRNA Length = 5174 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 362 aagaagaaggaagaggaaga 381
>ref|XM_898420.2| PREDICTED: Mus musculus UPF2 regulator of nonsense transcripts homolog (yeast), transcript variant 4 (Upf2), mRNA Length = 5730 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 918 aagaagaaggaagaggaaga 937
>gb|BC059279.1| Mus musculus chromatin modifying protein 4B, mRNA (cDNA clone MGC:68279 IMAGE:4019739), complete cds Length = 1581 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 721 aagaagaaggaagaggaaga 740
>gb|AC116326.5| Mus musculus BAC clone RP24-64C6 from chromosome 7, complete sequence Length = 181548 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 149545 aagaagaaggaagaggaaga 149526
>gb|AC133950.4| Mus musculus BAC clone RP24-243C16 from chromosome 7, complete sequence Length = 176244 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaa 620 |||||||||||||||||||| Sbjct: 167450 agaagaagaaggaagaggaa 167469
>gb|AC140193.3| Mus musculus BAC clone RP23-247C12 from chromosome 19, complete sequence Length = 173527 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 89 aagaagaaggaagaggaaga 108
>ref|XM_542966.2| PREDICTED: Canis familiaris similar to Protein c20orf178 (LOC485842), mRNA Length = 1608 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 742 aagaagaaggaagaggaaga 761
>ref|XM_752624.1| Ustilago maydis 521 hypothetical protein (UM01570.1) partial mRNA Length = 6954 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 582 gacgaggacgaggtggccga 601 |||||||||||||||||||| Sbjct: 493 gacgaggacgaggtggccga 512
>gb|AC146108.3| Pan troglodytes BAC clone RP43-22F10 from 7, complete sequence Length = 230349 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 gaagaagaaggaagaggaag 621 |||||||||||||||||||| Sbjct: 6822 gaagaagaaggaagaggaag 6803
>gb|AC146056.2| Pan troglodytes BAC clone RP43-89N11 from 7, complete sequence Length = 154447 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 gaagaagaaggaagaggaag 621 |||||||||||||||||||| Sbjct: 50100 gaagaagaaggaagaggaag 50081
>ref|XM_390705.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10529.1) partial mRNA Length = 1482 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaa 620 |||||||||||||||||||| Sbjct: 1019 agaagaagaaggaagaggaa 1038
>gb|AY288511.1| Euglena gracilis heat shock protein 90 mRNA, partial cds Length = 1915 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaa 620 |||||||||||||||||||| Sbjct: 1518 agaagaagaaggaagaggaa 1537
>gb|AY288510.1| Euglena gracilis heat shock protein 90 mRNA, partial cds Length = 1915 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 agaagaagaaggaagaggaa 620 |||||||||||||||||||| Sbjct: 1518 agaagaagaaggaagaggaa 1537
>gb|AC111008.6| Mus musculus BAC clone RP23-415J21 from chromosome 7, complete sequence Length = 193593 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 604 agaagaaggaagaggaagac 623 |||||||||||||||||||| Sbjct: 57721 agaagaaggaagaggaagac 57740
>gb|AC125130.3| Mus musculus BAC clone RP24-309C7 from chromosome 14, complete sequence Length = 159361 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 115613 gagaagaagaaggaagagga 115594
>gb|AC124349.4| Mus musculus BAC clone RP24-463G19 from chromosome 12, complete sequence Length = 122944 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 40077 gagaagaagaaggaagagga 40058
>gb|AC125074.3| Mus musculus BAC clone RP23-464N18 from chromosome 14, complete sequence Length = 181200 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 180161 gagaagaagaaggaagagga 180180
>gb|AC124722.3| Mus musculus BAC clone RP23-389E7 from chromosome 6, complete sequence Length = 193830 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 30094 gagaagaagaaggaagagga 30075
>ref|XM_855970.1| PREDICTED: Canis familiaris similar to CpG binding protein (Protein containing PHD finger and CXXC domain 1) (CXXC finger protein 1), transcript variant 7 (LOC480217), mRNA Length = 1523 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 598 ccgagaagaagaaggaagag 617 |||||||||||||||||||| Sbjct: 1171 ccgagaagaagaaggaagag 1190
>ref|XM_537342.2| PREDICTED: Canis familiaris similar to CpG binding protein (Protein containing PHD finger and CXXC domain 1) (CXXC finger protein 1), transcript variant 1 (LOC480217), mRNA Length = 2442 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 598 ccgagaagaagaaggaagag 617 |||||||||||||||||||| Sbjct: 1195 ccgagaagaagaaggaagag 1214
>ref|XM_855914.1| PREDICTED: Canis familiaris similar to CpG binding protein (Protein containing PHD finger and CXXC domain 1) (CXXC finger protein 1), transcript variant 6 (LOC480217), mRNA Length = 2193 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 598 ccgagaagaagaaggaagag 617 |||||||||||||||||||| Sbjct: 946 ccgagaagaagaaggaagag 965
>ref|XM_855885.1| PREDICTED: Canis familiaris similar to CpG binding protein (Protein containing PHD finger and CXXC domain 1) (CXXC finger protein 1), transcript variant 5 (LOC480217), mRNA Length = 2307 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 598 ccgagaagaagaaggaagag 617 |||||||||||||||||||| Sbjct: 1078 ccgagaagaagaaggaagag 1097
>ref|XM_845095.1| PREDICTED: Canis familiaris similar to CpG binding protein (Protein containing PHD finger and CXXC domain 1) (CXXC finger protein 1), transcript variant 2 (LOC480217), mRNA Length = 2418 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 598 ccgagaagaagaaggaagag 617 |||||||||||||||||||| Sbjct: 1171 ccgagaagaagaaggaagag 1190
>gb|AC073094.11| Homo sapiens BAC clone RP11-369D24 from 7, complete sequence Length = 189126 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 cctcctcctcccaagagagc 286 |||||||||||||||||||| Sbjct: 77727 cctcctcctcccaagagagc 77746
>gb|BC030539.1| Homo sapiens chromosome 21 open reading frame 66, mRNA (cDNA clone IMAGE:4397726), complete cds Length = 1530 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gggcggcttccccggcggcg 231 |||||||||||||||||||| Sbjct: 363 gggcggcttccccggcggcg 382
>gb|AC147434.12| Medicago truncatula clone mth2-28h7, complete sequence Length = 127300 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 607 agaaggaagaggaagacacg 626 |||||||||||||||||||| Sbjct: 89945 agaaggaagaggaagacacg 89964
>gb|DQ446849.1| Arabidopsis thaliana clone pENTR221-At4g18770 myb family transcription factor (At4g18770) mRNA, complete cds Length = 1284 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 1114 gagaagaagaaggaagagga 1133
>gb|BC062992.1| Homo sapiens cDNA clone IMAGE:5497083, containing frame-shift errors Length = 4012 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gggcggcttccccggcggcg 231 |||||||||||||||||||| Sbjct: 419 gggcggcttccccggcggcg 438
>emb|Z95332.1|HSCFAT5 Human DNA sequence from clone XX-CFAT5 on chromosome 11, complete sequence Length = 20874 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 ggaaggtgggggtgctgttc 461 |||||||||||||||||||| Sbjct: 11135 ggaaggtgggggtgctgttc 11116
>emb|AL683812.12| Human DNA sequence from clone RP5-1014E24 on chromosome 1, complete sequence Length = 40731 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 25667 gagaagaagaaggaagagga 25648
>emb|AL590803.10| Human DNA sequence from clone RP11-114C3 on chromosome 13, complete sequence Length = 25375 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 6831 gagaagaagaaggaagagga 6812
>emb|AL450472.14| Human DNA sequence from clone RP11-265D19 on chromosome X Contains the 5' end of the ZNF75 gene for zinc finger protein 75 (D8C6), gene FLJ23614, two novel genes, the 5' end of a novel gene, a novel pseudogene and four CpG islands, complete sequence Length = 177877 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 gaagaagaaggaagaggaag 621 |||||||||||||||||||| Sbjct: 91966 gaagaagaaggaagaggaag 91947
>emb|AL450326.30| Human DNA sequence from clone RP11-517P14 on chromosome 10 Contains the 5' end of the HNRPF gene for heterogeneous nuclear ribonucleoprotein F, part of a novel gene, the ZNF239 gene for zinc finger protein 239 (MOK2, HOK-2), two sinc finger protein pseudogenes and seven CpG islands, complete sequence Length = 197786 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 gaagaagaaggaagaggaag 621 |||||||||||||||||||| Sbjct: 135357 gaagaagaaggaagaggaag 135338
>emb|AL360172.17| Human DNA sequence from clone RP11-402D22 on chromosome 10 Contains the 5' end of the variant of a novel gene, complete sequence Length = 188937 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 165629 gagaagaagaaggaagagga 165648
>emb|AL139380.6| Human DNA sequence from clone RP11-463M3 on chromosome 13 Contains the 5' end of a novel gene, a G protein-coupled receptor kinase 6 (GPRK6)(GRK6) pseudogene and two CpG islands, complete sequence Length = 45797 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 35005 gagaagaagaaggaagagga 34986
>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1 Length = 206606 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 602 gaagaagaaggaagaggaag 621 |||||||||||||||||||| Sbjct: 3850 gaagaagaaggaagaggaag 3869
>gb|BC049622.1| Mus musculus UPF2 regulator of nonsense transcripts homolog (yeast), mRNA (cDNA clone IMAGE:6531961), partial cds Length = 663 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 362 aagaagaaggaagaggaaga 381
>gb|AC106606.5| Rattus norvegicus 1 BAC CH230-148J18 (Children's Hospital Oakland Research Institute) complete sequence Length = 227298 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 44185 aagaagaaggaagaggaaga 44166
>emb|AL596025.22| Mouse DNA sequence from clone RP23-215H18 on chromosome 11 Contains a novel gene and the 3' end of a gene that is a possible ortholog of human dynein axonemal heavy polypeptide 9 (DNAH9), complete sequence Length = 190066 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 gaagaagaaggaagaggaag 621 |||||||||||||||||||| Sbjct: 95805 gaagaagaaggaagaggaag 95786
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 gccatggacgaggacgaggt 595 |||||||||||||||||||| Sbjct: 32461 gccatggacgaggacgaggt 32442
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 gccatggacgaggacgaggt 595 |||||||||||||||||||| Sbjct: 202862 gccatggacgaggacgaggt 202881
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 gccatggacgaggacgaggt 595 |||||||||||||||||||| Sbjct: 228596 gccatggacgaggacgaggt 228615
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 gctcgaggcgctcgtcgagg 576 |||||||||||||||||||| Sbjct: 3381057 gctcgaggcgctcgtcgagg 3381038
>gb|AC159194.3| Mus musculus BAC clone RP23-469D18 from chromosome 7, complete sequence Length = 213870 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 604 agaagaaggaagaggaagac 623 |||||||||||||||||||| Sbjct: 114580 agaagaaggaagaggaagac 114599
>emb|AL606829.13| Mouse DNA sequence from clone RP23-10M12 on chromosome 11 Contains a novel gene (MOR280-1) similar to the olfactory receptor family, a novel gene (D330012D11Rik), the Zfp62 gene for zinc finger protein 62, the Mgat1 gene for mannoside acetylglucosaminyltransferase 1, a novel gene (MOR256-24) similar to the olfactory receptor family, a novel gene (MOR256-25) similar to the olfactory receptor family, a novel gene (LOC216715) similar to the olfactory receptor MOR256 family, a novel gene (MOR256-27) similar to the olfactory receptor family, a novel gene (MOR256-2) similar to the olfactory receptor family and three CpG islands, complete sequence Length = 203286 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 178722 gagaagaagaaggaagagga 178703
>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67 Length = 200001 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 82922 aagaagaaggaagaggaaga 82941
>emb|AL161549.2|ATCHRIV49 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 49 Length = 199075 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 90526 gagaagaagaaggaagagga 90545
>emb|AL161538.2|ATCHRIV38 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 38 Length = 198944 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 602 gaagaagaaggaagaggaag 621 |||||||||||||||||||| Sbjct: 143290 gaagaagaaggaagaggaag 143309
>emb|AL035602.1|ATT29A15 Arabidopsis thaliana DNA chromosome 4, BAC clone T29A15 (ESSA project) Length = 95679 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 22212 aagaagaaggaagaggaaga 22231
>emb|AL035526.1|ATF28A21 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A21 (ESSA project) Length = 94301 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 71245 gagaagaagaaggaagagga 71264
>emb|AJ293946.1|BLA293946 Bifidobacterium lactis guaA gene (partial), xfp gene and pta gene (partial) Length = 4123 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 493 tcggcgtcgacgagctcgagggcc 516 |||||||||| ||||||||||||| Sbjct: 3258 tcggcgtcgatgagctcgagggcc 3235
>gb|AC106857.8| Homo sapiens chromosome 8, clone RP11-262O21, complete sequence Length = 159454 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 38297 aagaagaaggaagaggaaga 38316
>ref|NM_001006025.1| Danio rerio zgc:103474 (zgc:103474), mRNA Length = 1455 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 ccgccctcacctcctccgtc 118 |||||||||||||||||||| Sbjct: 479 ccgccctcacctcctccgtc 498
>gb|AY844958.1| Zea mays beta-carotene hydroxylase (HYD3) mRNA, complete cds Length = 1277 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cttcgtcgccaagaacccgc 267 |||||||||||||||||||| Sbjct: 196 cttcgtcgccaagaacccgc 215
>gb|AY844957.1| Zea mays beta-carotene hydroxylase (HYD3) gene, complete cds Length = 2400 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cttcgtcgccaagaacccgc 267 |||||||||||||||||||| Sbjct: 622 cttcgtcgccaagaacccgc 641
>gb|AY844956.1| Zea mays beta-carotene hydroxylase (HYD1) mRNA, complete cds Length = 1392 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 cttcgtcgccaagaacccgc 267 |||||||||||||||||||| Sbjct: 143 cttcgtcgccaagaacccgc 162
>gb|AC022666.14| Homo sapiens, clone RP11-30K7, complete sequence Length = 150721 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 aagaagaaggaagaggaaga 622 |||||||||||||||||||| Sbjct: 106767 aagaagaaggaagaggaaga 106748
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 tggacccggacgcgttcgagaagg 195 |||||||||| ||||||||||||| Sbjct: 2267256 tggacccggaggcgttcgagaagg 2267233
>emb|CR603496.1| full-length cDNA clone CS0DI035YJ11 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1634 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 gggcggcttccccggcggcg 231 |||||||||||||||||||| Sbjct: 294 gggcggcttccccggcggcg 313
>gb|AC091834.2| Homo sapiens chromosome 5 clone CTD-2054H24, complete sequence Length = 120472 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 gaagaagaaggaagaggaag 621 |||||||||||||||||||| Sbjct: 16239 gaagaagaaggaagaggaag 16220
>gb|AC090648.5| Genomic sequence for Mus musculus, clone RP23-331I23, complete sequence Length = 198695 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 gagaagaagaaggaagagga 619 |||||||||||||||||||| Sbjct: 164684 gagaagaagaaggaagagga 164703 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,747,829 Number of Sequences: 3902068 Number of extensions: 5747829 Number of successful extensions: 161464 Number of sequences better than 10.0: 337 Number of HSP's better than 10.0 without gapping: 339 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 158340 Number of HSP's gapped (non-prelim): 3124 length of query: 627 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 604 effective length of database: 17,143,297,704 effective search space: 10354551813216 effective search space used: 10354551813216 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)