| Clone Name | basd22i14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK109401.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G01, full insert sequence Length = 1113 Score = 297 bits (150), Expect = 2e-77 Identities = 270/310 (87%) Strand = Plus / Plus Query: 214 ggggaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgt 273 ||||||||||||| || || || ||||| || ||||| ||||||||||||||||| || | Sbjct: 101 ggggaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcat 160 Query: 274 ctgaaaatgatcttcatgagttcttctcattctctggacctattgagcatatagacctta 333 |||||| |||||||||||||||||| |||||||||||| | |||||||||||||| |||| Sbjct: 161 ctgaaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaactta 220 Query: 334 tcagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgg 393 |||||||||||| ||||||||| |||||||||||||| ||||||||||||||| |||||| Sbjct: 221 tcagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgg 280 Query: 394 aaactgcagtattgttgagtggggctaccattgtggatcagccggtgtgcatatctcgtt 453 |||||||||||||| | ||||||||||| |||||||||||||| || || ||| |||| | Sbjct: 281 aaactgcagtattgctcagtggggctactattgtggatcagccagtttgtatagctcgct 340 Query: 454 ggggacagcctgatgagcctagtaatttctgggacaggccaacttggcaggtcgaggagg 513 ||||||||||| |||| || ||||||||||||| |||| |||| | ||||||| Sbjct: 341 ggggacagcctaatgaaccatacaatttctgggacacaccaaattggtatacagaggagg 400 Query: 514 aaattgaata 523 |||||||||| Sbjct: 401 aaattgaata 410
>dbj|AK062620.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-B07, full insert sequence Length = 479 Score = 291 bits (147), Expect = 1e-75 Identities = 267/307 (86%) Strand = Plus / Plus Query: 217 gaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctg 276 |||||||||| || || || ||||| || ||||| ||||||||||||||||| || |||| Sbjct: 108 gaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcatctg 167 Query: 277 aaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatca 336 ||| |||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| Sbjct: 168 aaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaacttatca 227 Query: 337 gatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttggaaa 396 ||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||||| Sbjct: 228 gatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttggaaa 287 Query: 397 ctgcagtattgttgagtggggctaccattgtggatcagccggtgtgcatatctcgttggg 456 ||||||||||| | ||||||||||| |||||||||||||| || || ||| |||| |||| Sbjct: 288 ctgcagtattgctcagtggggctactattgtggatcagccagtttgtatagctcgctggg 347 Query: 457 gacagcctgatgagcctagtaatttctgggacaggccaacttggcaggtcgaggaggaaa 516 |||||||| |||| || ||||||||||||| |||| |||| | |||||||||| Sbjct: 348 gacagcctaatgaaccatacaatttctgggacacaccaaattggtatacagaggaggaaa 407 Query: 517 ttgaata 523 ||||||| Sbjct: 408 ttgaata 414
>ref|XM_474067.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 756 Score = 283 bits (143), Expect = 3e-73 Identities = 251/287 (87%) Strand = Plus / Plus Query: 237 tacactgtggaagtcactaacctgtcaagcagcgcgtctgaaaatgatcttcatgagttc 296 ||||| || ||||| ||||||||||||||||| || ||||||| |||||||||||||||| Sbjct: 16 tacacagttgaagttactaacctgtcaagcagggcatctgaaagtgatcttcatgagttc 75 Query: 297 ttctcattctctggacctattgagcatatagaccttatcagatcaggaggatatggttca 356 || |||||||||||| | |||||||||||||| |||||||||||||||| ||||||||| Sbjct: 76 ttttcattctctggagcgattgagcatatagaacttatcagatcaggagaatatggttct 135 Query: 357 actgcttatgtgactttcaaggaaccctatgccttggaaactgcagtattgttgagtggg 416 |||||||||||||| ||||||||||||||| |||||||||||||||||||| | |||||| Sbjct: 136 actgcttatgtgacattcaaggaaccctattccttggaaactgcagtattgctcagtggg 195 Query: 417 gctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgagcctagt 476 ||||| |||||||||||||| || || ||| |||| |||||||||||| |||| || Sbjct: 196 gctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaaccatac 255 Query: 477 aatttctgggacaggccaacttggcaggtcgaggaggaaattgaata 523 ||||||||||||| |||| |||| | ||||||||||||||||| Sbjct: 256 aatttctgggacacaccaaattggtatacagaggaggaaattgaata 302
>gb|AY108401.1| Zea mays PCO068228 mRNA sequence Length = 1376 Score = 270 bits (136), Expect = 4e-69 Identities = 265/308 (86%) Strand = Plus / Plus Query: 216 ggaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtct 275 ||||| ||||| | ||||||| ||||||| ||||||||||||| || ||||| | ||| Sbjct: 342 ggaattatgagtgaaacagggcacactgtacaagtcactaacctctcgagcagagtatct 401 Query: 276 gaaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatc 335 |||| |||||||||||||||||| || |||||||| ||||||||||||||||| |||||| Sbjct: 402 gaaagtgatcttcatgagttcttttcgttctctggtcctattgagcatatagaacttatc 461 Query: 336 agatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttggaa 395 ||||||| |||||| ||| | |||||||||||||| |||||||||| || |||||||||| Sbjct: 462 agatcagaaggatacggtgccactgcttatgtgacattcaaggaacgctttgccttggaa 521 Query: 396 actgcagtattgttgagtggggctaccattgtggatcagccggtgtgcatatctcgttgg 455 |||||||||||| | ||||||||||| |||||||||||||| || |||||| | |||| Sbjct: 522 actgcagtattgctcagtggggctactattgtggatcagccagtatgcataacctattgg 581 Query: 456 ggacagcctgatgagcctagtaatttctgggacaggccaacttggcaggtcgaggaggaa 515 ||||| ||||| | || ||||||||||||||||||||||||| |||| || |||||| Sbjct: 582 ggacaacctgagggaacttttaatttctgggacaggccaacttgggaggttgaagaggaa 641 Query: 516 attgaata 523 || ||||| Sbjct: 642 atcgaata 649
>gb|BT016343.1| Zea mays clone Contig176 mRNA sequence Length = 1045 Score = 262 bits (132), Expect = 1e-66 Identities = 264/308 (85%) Strand = Plus / Minus Query: 216 ggaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtct 275 ||||| ||||| | ||||||| ||||||| ||||||||||||| || ||||| | ||| Sbjct: 942 ggaattatgagtgaaacagggcacactgtacaagtcactaacctctcgagcagagtatct 883 Query: 276 gaaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatc 335 |||| |||||||||||||||||| || |||||||| |||||| |||||||||| |||||| Sbjct: 882 gaaagtgatcttcatgagttcttttcgttctctggtcctattcagcatatagaacttatc 823 Query: 336 agatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttggaa 395 ||||||| |||||| ||| | |||||||||||||| |||||||||| || |||||||||| Sbjct: 822 agatcagaaggatacggtgccactgcttatgtgacattcaaggaacgctttgccttggaa 763 Query: 396 actgcagtattgttgagtggggctaccattgtggatcagccggtgtgcatatctcgttgg 455 |||||||||||| | ||||||||||| |||||||||||||| || |||||| | |||| Sbjct: 762 actgcagtattgctcagtggggctactattgtggatcagccagtatgcataacctattgg 703 Query: 456 ggacagcctgatgagcctagtaatttctgggacaggccaacttggcaggtcgaggaggaa 515 ||||| ||||| | || ||||||||||||||||||||||||| |||| || |||||| Sbjct: 702 ggacaacctgagggaacttttaatttctgggacaggccaacttgggaggttgaagaggaa 643 Query: 516 attgaata 523 || ||||| Sbjct: 642 atcgaata 635
>gb|AY105883.1| Zea mays PCO068227 mRNA sequence Length = 1236 Score = 260 bits (131), Expect = 4e-66 Identities = 260/303 (85%) Strand = Plus / Plus Query: 221 catgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctgaaaa 280 |||||| | ||||||| ||||||| ||||||||||||| || ||||| | ||||||| Sbjct: 271 catgagtgaaacagggcacactgtacaagtcactaacctctcgagcagagtatctgaaag 330 Query: 281 tgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatcagatc 340 ||||||| |||||||||| || |||||||| |||||||| ||| | || ||||||||||| Sbjct: 331 tgatctttatgagttcttttcgttctctggccctattgaacatgttgaacttatcagatc 390 Query: 341 aggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttggaaactgc 400 ||||| ||| ||| | |||||||||||||| |||||||| | || ||||||||||||||| Sbjct: 391 aggagaatacggtgctactgcttatgtgacattcaaggagcgctttgccttggaaactgc 450 Query: 401 agtattgttgagtggggctaccattgtggatcagccggtgtgcatatctcgttggggaca 460 |||||| | ||||||||||| ||||||||||||||||| |||||| || ||||||||| Sbjct: 451 ggtattgctcagtggggctactattgtggatcagccggtatgcataacttattggggaca 510 Query: 461 gcctgatgagcctagtaatttctgggacaggccaacttggcaggtcgaggaggaaattga 520 ||||| ||| || ||||||||||||||||||||||||| |||| || ||||||||||| Sbjct: 511 acctgaggagacttttaatttctgggacaggccaacttgggaggttgaagaggaaattga 570 Query: 521 ata 523 ||| Sbjct: 571 ata 573
>emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18, complete sequence Length = 150416 Score = 129 bits (65), Expect = 1e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 217 gaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctg 276 |||||||||| || || || ||||| || ||||| ||||||||||||||||| || |||| Sbjct: 29779 gaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcatctg 29720 Query: 277 aaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatca 336 ||| |||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| Sbjct: 29719 aaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaacttatca 29660 Query: 337 g 337 | Sbjct: 29659 g 29659 Score = 113 bits (57), Expect = 6e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 335 cagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgga 394 ||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||| Sbjct: 29322 cagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgga 29263 Query: 395 aactgcagtattg 407 ||||||||||||| Sbjct: 29262 aactgcagtattg 29250 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 414 ggggctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgagcct 473 |||||||| |||||||||||||| || || ||| |||| |||||||||||| |||| || Sbjct: 28438 ggggctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaacca 28379 Query: 474 agtaatttctgggacaggccaacttggcaggtcgaggaggaaattgaatataggg 528 ||||||||||||| |||| |||| | ||||||||||||||||| |||| Sbjct: 28378 tacaatttctgggacacaccaaattggtatacagaggaggaaattgaatacaggg 28324
>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02, complete sequence Length = 126659 Score = 129 bits (65), Expect = 1e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 217 gaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctg 276 |||||||||| || || || ||||| || ||||| ||||||||||||||||| || |||| Sbjct: 65365 gaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcatctg 65306 Query: 277 aaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatca 336 ||| |||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| Sbjct: 65305 aaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaacttatca 65246 Query: 337 g 337 | Sbjct: 65245 g 65245 Score = 113 bits (57), Expect = 6e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 335 cagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgga 394 ||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||| Sbjct: 64908 cagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgga 64849 Query: 395 aactgcagtattg 407 ||||||||||||| Sbjct: 64848 aactgcagtattg 64836 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 414 ggggctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgagcct 473 |||||||| |||||||||||||| || || ||| |||| |||||||||||| |||| || Sbjct: 64024 ggggctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaacca 63965 Query: 474 agtaatttctgggacaggccaacttggcaggtcgaggaggaaattgaatataggg 528 ||||||||||||| |||| |||| | ||||||||||||||||| |||| Sbjct: 63964 tacaatttctgggacacaccaaattggtatacagaggaggaaattgaatacaggg 63910
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 129 bits (65), Expect = 1e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 217 gaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctg 276 |||||||||| || || || ||||| || ||||| ||||||||||||||||| || |||| Sbjct: 32670344 gaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcatctg 32670285 Query: 277 aaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatca 336 ||| |||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| Sbjct: 32670284 aaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaacttatca 32670225 Query: 337 g 337 | Sbjct: 32670224 g 32670224 Score = 113 bits (57), Expect = 6e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 335 cagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgga 394 ||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||| Sbjct: 32669887 cagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgga 32669828 Query: 395 aactgcagtattg 407 ||||||||||||| Sbjct: 32669827 aactgcagtattg 32669815 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 414 ggggctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgagcct 473 |||||||| |||||||||||||| || || ||| |||| |||||||||||| |||| || Sbjct: 32669003 ggggctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaacca 32668944 Query: 474 agtaatttctgggacaggccaacttggcaggtcgaggaggaaattgaatataggg 528 ||||||||||||| |||| |||| | ||||||||||||||||| |||| Sbjct: 32668943 tacaatttctgggacacaccaaattggtatacagaggaggaaattgaatacaggg 32668889
>emb|AL732339.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0414F07, complete sequence Length = 50928 Score = 129 bits (65), Expect = 1e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 217 gaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctg 276 |||||||||| || || || ||||| || ||||| ||||||||||||||||| || |||| Sbjct: 47626 gaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcatctg 47567 Query: 277 aaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatca 336 ||| |||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| Sbjct: 47566 aaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaacttatca 47507 Query: 337 g 337 | Sbjct: 47506 g 47506 Score = 113 bits (57), Expect = 6e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 335 cagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgga 394 ||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||| Sbjct: 47169 cagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgga 47110 Query: 395 aactgcagtattg 407 ||||||||||||| Sbjct: 47109 aactgcagtattg 47097 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 414 ggggctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgagcct 473 |||||||| |||||||||||||| || || ||| |||| |||||||||||| |||| || Sbjct: 46285 ggggctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaacca 46226 Query: 474 agtaatttctgggacaggccaacttggcaggtcgaggaggaaattgaatataggg 528 ||||||||||||| |||| |||| | ||||||||||||||||| |||| Sbjct: 46225 tacaatttctgggacacaccaaattggtatacagaggaggaaattgaatacaggg 46171
>emb|AL442112.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0423H10, complete sequence Length = 76529 Score = 129 bits (65), Expect = 1e-26 Identities = 107/121 (88%) Strand = Plus / Minus Query: 217 gaatcatgagcggaacagggtacactgtggaagtcactaacctgtcaagcagcgcgtctg 276 |||||||||| || || || ||||| || ||||| ||||||||||||||||| || |||| Sbjct: 11108 gaatcatgagtggtacgggatacacagttgaagttactaacctgtcaagcagggcatctg 11049 Query: 277 aaaatgatcttcatgagttcttctcattctctggacctattgagcatatagaccttatca 336 ||| |||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| Sbjct: 11048 aaagtgatcttcatgagttcttttcattctctggagcgattgagcatatagaacttatca 10989 Query: 337 g 337 | Sbjct: 10988 g 10988 Score = 113 bits (57), Expect = 6e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 335 cagatcaggaggatatggttcaactgcttatgtgactttcaaggaaccctatgccttgga 394 ||||||||||| ||||||||| |||||||||||||| ||||||||||||||| ||||||| Sbjct: 10651 cagatcaggagaatatggttctactgcttatgtgacattcaaggaaccctattccttgga 10592 Query: 395 aactgcagtattg 407 ||||||||||||| Sbjct: 10591 aactgcagtattg 10579 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 414 ggggctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgagcct 473 |||||||| |||||||||||||| || || ||| |||| |||||||||||| |||| || Sbjct: 9767 ggggctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaacca 9708 Query: 474 agtaatttctgggacaggccaacttggcaggtcgaggaggaaattgaatataggg 528 ||||||||||||| |||| |||| | ||||||||||||||||| |||| Sbjct: 9707 tacaatttctgggacacaccaaattggtatacagaggaggaaattgaatacaggg 9653
>emb|AJ293489.1|SHY293489 Saccharum hybrid cultivar R570 microsatellite DNA, clone mSSCIR17 Length = 403 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 247 aagtcactaacctgtcaagcagcgcgtctgaaaatgatcttcatgagttcttctcattct 306 ||||||||||||| || ||||| | ||||||| |||||||||||||||||| || |||| Sbjct: 400 aagtcactaacctctcgagcagagtatctgaaagtgatcttcatgagttcttttcgttct 341 Query: 307 ctggacctattgagcatatagaccttatcag 337 |||| ||||||||||| ||||| |||||||| Sbjct: 340 ctggtcctattgagcacatagaacttatcag 310
>dbj|AK059892.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D10, full insert sequence Length = 927 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 411 agtggggctaccattgtggatcagccggtgtgcatatctcgttggggacagcctgatgag 470 ||||||||||| |||||||||||||| || || ||| |||| |||||||||||| |||| Sbjct: 1 agtggggctactattgtggatcagccagtttgtatagctcgctggggacagcctaatgaa 60 Query: 471 cctagtaatttctgggacaggccaacttggcaggtcgaggaggaaattgaata 523 || ||||||||||||| |||| |||| | ||||||||||||||||| Sbjct: 61 ccatacaatttctgggacacaccaaattggtatacagaggaggaaattgaata 113
>emb|CR376839.12| Zebrafish DNA sequence from clone DKEY-75G22 in linkage group 2, complete sequence Length = 127371 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 91 tggcaacacccagacccaccgc 112 |||||||||||||||||||||| Sbjct: 18282 tggcaacacccagacccaccgc 18261
>emb|AL034380.26|HS50O24 Human DNA sequence from clone RP1-50O24 on chromosome 1p35.1-35.3 Contains the 3' end of the SMARCF1 gene for SWI/SNF related, matrix associated, actin dependent regulator of chromatin (subfamily f, member 1), a novel gene (FLJ20477), the ZDHHC18 gene for zinc finger, DHHC domain containing 18, the SFN gene for stratifin, two novel genes, a novel gene (FLJ10349), the 3' end of a novel gene (FLJ12455) and two CpG islands, complete sequence Length = 157435 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 181 gcagggagggagggagggcgag 202 |||||||||||||||||||||| Sbjct: 62355 gcagggagggagggagggcgag 62334
>emb|BX572093.1| Prochlorococcus marinus MED4 complete genome; segment 4/5 Length = 348986 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 323 tatagaccttatcagatcagga 344 |||||||||||||||||||||| Sbjct: 104615 tatagaccttatcagatcagga 104636
>gb|AC004873.3| Homo sapiens PAC clone RP4-742P4 from 1, complete sequence Length = 131329 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 181 gcagggagggagggagggcgag 202 |||||||||||||||||||||| Sbjct: 19945 gcagggagggagggagggcgag 19966
>ref|XM_517941.1| PREDICTED: Pan troglodytes similar to Ptx1 (LOC462072), mRNA Length = 1736 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 tctgcagggagggagggaggg 198 ||||||||||||||||||||| Sbjct: 665 tctgcagggagggagggaggg 685
>gb|AC161193.3| Mus musculus chromosome 8, clone RP23-308L22, complete sequence Length = 177860 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 tctgcagggagggagggaggg 198 ||||||||||||||||||||| Sbjct: 36975 tctgcagggagggagggaggg 36995
>gb|AC112964.8| Mus musculus chromosome 8, clone RP24-82M4, complete sequence Length = 193076 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 tctgcagggagggagggaggg 198 ||||||||||||||||||||| Sbjct: 88938 tctgcagggagggagggaggg 88958
>gb|AC161375.4| Mus musculus BAC clone RP23-297A22 from chromosome 14, complete sequence Length = 211662 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 agggagggagggagggcgaga 203 ||||||||||||||||||||| Sbjct: 123919 agggagggagggagggcgaga 123939
>gb|AC154528.2| Mus musculus BAC clone RP23-460I18 from chromosome 14, complete sequence Length = 207430 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 agggagggagggagggcgaga 203 ||||||||||||||||||||| Sbjct: 206102 agggagggagggagggcgaga 206082
>gb|AY521556.1| Cancer magister clone Cma8b microsatellite sequence Length = 272 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 agggagggagggagggcgaga 203 ||||||||||||||||||||| Sbjct: 93 agggagggagggagggcgaga 73
>ref|XM_868038.1| PREDICTED: Bos taurus similar to gamma-aminobutyric acid (GABA-A) transporter 4 (LOC616071), partial mRNA Length = 1233 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 140 gcgaggagcaggaggagggac 160 ||||||||||||||||||||| Sbjct: 1183 gcgaggagcaggaggagggac 1163
>gb|AC135409.3| Rattus norvegicus 8 BAC CH230-416D7 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 231716 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 agggagggagggagggcgaga 203 ||||||||||||||||||||| Sbjct: 197708 agggagggagggagggcgaga 197728
>gb|AY466214.1| Litopenaeus vannamei microsatellite TUMXLV7.107 sequence Length = 416 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 187 agggagggagggcgagaccgc 207 ||||||||||||||||||||| Sbjct: 59 agggagggagggcgagaccgc 39
>gb|AC129016.4| Mus musculus BAC clone RP24-389J11 from chromosome 10, complete sequence Length = 160180 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 183 agggagggagggagggcgagaccgcgaga 211 |||||||||||||||| ||||||| |||| Sbjct: 1767 agggagggagggagggagagaccgagaga 1739
>gb|AC068138.6| Homo sapiens BAC clone RP11-813K12 from 2, complete sequence Length = 168698 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 agggagggagggagggcgaga 203 ||||||||||||||||||||| Sbjct: 52576 agggagggagggagggcgaga 52596
>gb|AC154517.2| Mus musculus BAC clone RP24-85L11 from chromosome 12, complete sequence Length = 167631 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 agggagggagggagggcgaga 203 ||||||||||||||||||||| Sbjct: 119979 agggagggagggagggcgaga 119999
>gb|AC079193.10| Homo sapiens chromosome 8, clone RP11-468H14, complete sequence Length = 169041 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 286 ttcatgagttcttctcattctctgg 310 |||||||||||||||| |||||||| Sbjct: 149865 ttcatgagttcttctccttctctgg 149841
>ref|XM_216230.3| PREDICTED: Rattus norvegicus RAD52 homolog (S. cerevisiae) (predicted) (Rad52_predicted), mRNA Length = 1999 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 174 gcactctgcagggagggagggaggg 198 |||||||| |||||||||||||||| Sbjct: 1973 gcactctgaagggagggagggaggg 1949
>gb|U58105.1|MMU58105 Mus musculus Btk locus, alpha-D-galactosidase A (Ags), ribosomal protein (L44L), and Bruton's tyrosine kinase (Btk) genes, complete cds Length = 88871 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 agggagggagggagggcgaga 203 ||||||||||||||||||||| Sbjct: 4000 agggagggagggagggcgaga 4020
>gb|AC091050.3| Homo sapiens chromosome 8, clone RP11-242F4, complete sequence Length = 139980 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 286 ttcatgagttcttctcattctctgg 310 |||||||||||||||| |||||||| Sbjct: 86172 ttcatgagttcttctccttctctgg 86196
>gb|AC153537.4| Mus musculus 10 BAC RP23-283A2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221267 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 183 agggagggagggagggcgagaccgcgaga 211 |||||||||||||||| ||||||| |||| Sbjct: 150169 agggagggagggagggagagaccgagaga 150141
>dbj|AP006207.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-702B3, complete sequence Length = 170015 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 286 ttcatgagttcttctcattctctgg 310 |||||||||||||||| |||||||| Sbjct: 119187 ttcatgagttcttctccttctctgg 119163
>gb|AC145207.2| Homo sapiens chromosome 17, clone RP11-498C9, complete sequence Length = 182848 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 cagggagggagggagggcgag 202 ||||||||||||||||||||| Sbjct: 18931 cagggagggagggagggcgag 18951
>emb|CT030238.7| Mouse DNA sequence from clone RP23-428E20 on chromosome 14, complete sequence Length = 194408 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 agggagggagggagggcgaga 203 ||||||||||||||||||||| Sbjct: 180941 agggagggagggagggcgaga 180961
>dbj|D31781.1|TRUGTGPLAD Trimeresurus gramineus gTgPLA2-V gene for phospholipase A2, complete cds (exon1-4) Length = 2828 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 179 ctgcagggagggagggagggcgaga 203 |||||||||||||||||||| |||| Sbjct: 1431 ctgcagggagggagggagggagaga 1407
>dbj|D31779.1|TRUGTGPLAB Trimeresurus gramineus gTgPLA6a gene for phospholipase A2, complete cds (exon1-4) Length = 3571 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 179 ctgcagggagggagggagggcgaga 203 |||||||||||||||||||| |||| Sbjct: 1668 ctgcagggagggagggagggagaga 1644
>dbj|AB020859.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular colorectal and non-small cell lung cancer , segment 2/11 Length = 100000 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 286 ttcatgagttcttctcattctctgg 310 |||||||||||||||| |||||||| Sbjct: 80092 ttcatgagttcttctccttctctgg 80068
>emb|AL807392.7| Mouse DNA sequence from clone RP23-104D24 on chromosome 4, complete sequence Length = 132773 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 agggagggagggagggcgaga 203 ||||||||||||||||||||| Sbjct: 76293 agggagggagggagggcgaga 76273
>gb|AC160028.9| Mus musculus 10 BAC RP24-570M12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 223055 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ctgcagggagggagggaggg 198 |||||||||||||||||||| Sbjct: 153802 ctgcagggagggagggaggg 153783
>gb|AC118472.8| Mus musculus chromosome 19, clone RP23-187N14, complete sequence Length = 222869 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ctgcagggagggagggaggg 198 |||||||||||||||||||| Sbjct: 172974 ctgcagggagggagggaggg 172993
>gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosome 6, complete sequence Length = 197482 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ctgcagggagggagggaggg 198 |||||||||||||||||||| Sbjct: 71648 ctgcagggagggagggaggg 71629
>ref|XM_655987.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3475.2), mRNA Length = 2283 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cgaggagcaggaggagggac 160 |||||||||||||||||||| Sbjct: 462 cgaggagcaggaggagggac 481
>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome Length = 1044459 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ggccgcgaggagcaggagga 155 |||||||||||||||||||| Sbjct: 455368 ggccgcgaggagcaggagga 455349
>gb|AC079957.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-144I17, complete sequence Length = 196474 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 189236 agggagggagggagggcgag 189255
>gb|AC124676.7| Mus musculus chromosome 6, clone RP24-93M1, complete sequence Length = 212789 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 100540 agggagggagggagggcgag 100521
>gb|AC165370.4| Mus musculus BAC clone RP23-2N3 from chromosome 10, complete sequence Length = 219653 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 172217 agggagggagggagggcgag 172198
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcgaggagcaggaggaggg 158 |||||||||||||||||||| Sbjct: 3584188 cgcgaggagcaggaggaggg 3584207
>gb|AC165425.2| Mus musculus BAC clone RP23-252G18 from chromosome 9, complete sequence Length = 217329 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ctgcagggagggagggaggg 198 |||||||||||||||||||| Sbjct: 112879 ctgcagggagggagggaggg 112860
>gb|AC118704.17| Mus musculus chromosome 13, clone RP24-114K21, complete sequence Length = 197574 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 181231 agggagggagggagggcgag 181250
>gb|AC132402.3| Mus musculus BAC clone RP23-404I24 from chromosome 19, complete sequence Length = 217490 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 135705 agggagggagggagggcgag 135724
>emb|BX957236.8| Zebrafish DNA sequence from clone DKEY-178O3 in linkage group 6, complete sequence Length = 211391 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 agttcttctcattctctgga 311 |||||||||||||||||||| Sbjct: 16628 agttcttctcattctctgga 16647
>emb|CR956384.6| Pig DNA sequence from clone CH242-132L9 on chromosome 17, complete sequence Length = 71546 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ctgcagggagggagggaggg 198 |||||||||||||||||||| Sbjct: 55440 ctgcagggagggagggaggg 55421
>ref|XM_849034.1| PREDICTED: Canis familiaris similar to Retinol dehydrogenase 13 (LOC611373), mRNA Length = 1005 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 cggcgcggcggtgggtggtgccgtgctg 66 |||| ||||||||||||| ||||||||| Sbjct: 33 cggcacggcggtgggtggcgccgtgctg 60
>gb|AC158771.2| Mus musculus chromosome 15, clone RP23-450E19, complete sequence Length = 199600 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 146189 agggagggagggagggcgag 146208
>emb|AL133270.24| Human DNA sequence from clone RP4-810F7 on chromosome 6 Contains a ferritin pseudogene, complete sequence Length = 87789 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 22455 agggagggagggagggcgag 22474
>emb|X52175.1|CTL2DNAK Chlamydia trachomatis L2 dnaK like gene Length = 2340 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ggccgcgaggagcaggagga 155 |||||||||||||||||||| Sbjct: 1606 ggccgcgaggagcaggagga 1587
>gb|AC156039.4| Mus musculus BAC clone RP23-24C2 from chromosome 10, complete sequence Length = 206634 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 106892 agggagggagggagggcgag 106873
>emb|AL646051.19| Mouse DNA sequence from clone RP23-222M22 on chromosome 11 Contains the 5' end of the Hs3st3a gene for heparan sulfate (glucosamine) 3-O-sulfotransferase 3A and a CpG island, complete sequence Length = 144847 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 62552 agggagggagggagggcgag 62533
>emb|AL645522.12| Mouse DNA sequence from clone RP23-64E17 on chromosome 11 Cntains the 3' end of the Nipsnap1 gene for 4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans), a novel gene, a ribosomal protein L17 (Rpl17) pseudogene, the Nefh gene for neurofilament heavy polypeptide, the Ap1b1 gene for adaptor protein complex AP-1 beta 1 subunit, the gene for the ortholog of human RAS-related protein on chromosome 22, the gene for the ortholog of human growth arrest-specific 2 like 1 GAS2L1 and six CpG islands, complete sequence Length = 183758 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 16048 agggagggagggagggcgag 16029
>gb|AC015961.16| Homo sapiens chromosome 18, clone RP11-95O2, complete sequence Length = 163808 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ctgcagggagggagggaggg 198 |||||||||||||||||||| Sbjct: 157694 ctgcagggagggagggaggg 157713
>gb|AC149225.18| Danio rerio clone ch211-103f17, complete sequence Length = 185038 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 agttcttctcattctctgga 311 |||||||||||||||||||| Sbjct: 152518 agttcttctcattctctgga 152499
>gb|AC008087.11| Homo sapiens chromosome 17, clone RP5-1127L24, complete sequence Length = 104726 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 581 agggagggagggagggcgag 562
>gb|AC114648.25| Mus musculus chromosome 8, clone RP24-144H17, complete sequence Length = 171191 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 99625 agggagggagggagggcgag 99606
>gb|AC012236.12| Homo sapiens chromosome 15, clone RP11-16E12, complete sequence Length = 173729 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 gggccgcgaggagcaggaggaggg 158 ||||||||||||| |||||||||| Sbjct: 18404 gggccgcgaggaggaggaggaggg 18427
>gb|AC008406.7| Homo sapiens chromosome 5 clone CTC-276P9, complete sequence Length = 178030 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 gcagggagggagggagggcg 200 |||||||||||||||||||| Sbjct: 24158 gcagggagggagggagggcg 24139
>gb|AF442820.1|AF442820 Mus musculus strain 129/SvJ endothelial and smooth muscle cell-derived neuropilin-like protein (Esdn) mRNA, partial cds Length = 531 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gggagggagggagggcgaga 203 |||||||||||||||||||| Sbjct: 51 gggagggagggagggcgaga 70
>gb|AF387548.1|AF387548 Mus musculus strain ICR endothelial and smooth muscle cell-derived neuropilin-like protein (Esdn) mRNA, complete cds Length = 2642 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gggagggagggagggcgaga 203 |||||||||||||||||||| Sbjct: 29 gggagggagggagggcgaga 48
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 11731665 agggagggagggagggcgag 11731646
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcgaggagcaggaggaggg 158 |||||||||||||||||||| Sbjct: 3584299 cgcgaggagcaggaggaggg 3584318
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gggagggcgagaccgcgaga 211 |||||||||||||||||||| Sbjct: 5971540 gggagggcgagaccgcgaga 5971559
>gb|AC137875.13| Mus musculus chromosome 15, clone RP23-62B15, complete sequence Length = 195956 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 166771 agggagggagggagggcgag 166752
>gb|AC090386.13| Homo sapiens chromosome 18, clone RP11-797E24, complete sequence Length = 185563 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ctgcagggagggagggaggg 198 |||||||||||||||||||| Sbjct: 157943 ctgcagggagggagggaggg 157924
>gb|AC155655.8| Mus musculus 6 BAC RP24-66L18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 203618 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 79536 agggagggagggagggcgag 79517
>gb|AC087793.17| Homo sapiens chromosome 8, clone RP5-1118A7, complete sequence Length = 124060 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 tctgcagggagggagggagg 197 |||||||||||||||||||| Sbjct: 13173 tctgcagggagggagggagg 13154
>gb|AC024952.4|AC024952 Homo sapiens chromosome 7 clone RP11-66F23, complete sequence Length = 182426 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 gcagggagggagggagggcg 200 |||||||||||||||||||| Sbjct: 75875 gcagggagggagggagggcg 75856
>gb|AC138696.4| Homo sapiens chromosome 8, clone RP13-582O9, complete sequence Length = 165019 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 tctgcagggagggagggagg 197 |||||||||||||||||||| Sbjct: 125036 tctgcagggagggagggagg 125017
>gb|AC123767.2| Homo sapiens chromosome 8, clone RP11-122L4, complete sequence Length = 154078 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 gaaaatgatcttcatgagtt 295 |||||||||||||||||||| Sbjct: 64152 gaaaatgatcttcatgagtt 64133
>gb|AC074091.6| Homo sapiens BAC clone RP11-158I13 from 2, complete sequence Length = 204153 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ctgcagggagggagggaggg 198 |||||||||||||||||||| Sbjct: 38966 ctgcagggagggagggaggg 38985
>gb|AC019172.4| Homo sapiens BAC clone RP11-178E6 from 2, complete sequence Length = 176983 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 cttcatgagttcttctcatt 304 |||||||||||||||||||| Sbjct: 99493 cttcatgagttcttctcatt 99474
>gb|AC027455.22| Homo sapiens chromosome 17, clone RP11-411G7, complete sequence Length = 145410 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 47914 agggagggagggagggcgag 47895
>gb|AC104259.14| Homo sapiens chromosome 15, clone CTD-2525I4, complete sequence Length = 155753 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ctgcagggagggagggaggg 198 |||||||||||||||||||| Sbjct: 83098 ctgcagggagggagggaggg 83079
>gb|AC002504.1| Homo sapiens X PAC RP1-258N20 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 134970 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 gcagggagggagggagggcgagac 204 |||||||||||||||||| ||||| Sbjct: 50659 gcagggagggagggagggagagac 50636
>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0026H19, complete sequence Length = 150620 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 cgcgaggagcaggaggaggg 158 |||||||||||||||||||| Sbjct: 101841 cgcgaggagcaggaggaggg 101860
>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome Length = 1042519 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ggccgcgaggagcaggagga 155 |||||||||||||||||||| Sbjct: 453012 ggccgcgaggagcaggagga 452993
>dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466B10 Length = 151806 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gggagggcgagaccgcgaga 211 |||||||||||||||||||| Sbjct: 39428 gggagggcgagaccgcgaga 39447
>dbj|AK024438.1| Homo sapiens mRNA for FLJ00028 protein, partial cds Length = 4673 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 tctgcagggagggagggagg 197 |||||||||||||||||||| Sbjct: 3213 tctgcagggagggagggagg 3194
>gb|AC006445.11|AC006445 Homo sapiens chromosome 4 clone C0367I21, complete sequence Length = 174547 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 gaggagcaggaggagggacg 161 |||||||||||||||||||| Sbjct: 9060 gaggagcaggaggagggacg 9079
>dbj|AP001006.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-687I9, complete sequence Length = 193999 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gtggggctaccattgtggat 431 |||||||||||||||||||| Sbjct: 169165 gtggggctaccattgtggat 169146
>dbj|AP005854.3| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1063B1, complete sequence Length = 55116 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 tctgcagggagggagggagg 197 |||||||||||||||||||| Sbjct: 20453 tctgcagggagggagggagg 20434
>dbj|AP000797.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-36B5, complete sequence Length = 148490 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gaggagcaggaggagggacg 161 |||||||||||||||||||| Sbjct: 106430 gaggagcaggaggagggacg 106411
>dbj|AB017651.2| Homo sapiens genomic DNA, chromosome 11q23.2, clone:KB615C6, complete sequence Length = 131668 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gaggagcaggaggagggacg 161 |||||||||||||||||||| Sbjct: 4384 gaggagcaggaggagggacg 4365
>emb|CT027564.7| Mouse DNA sequence from clone RP24-293N14 on chromosome 16, complete sequence Length = 180784 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gggagggagggagggcgaga 203 |||||||||||||||||||| Sbjct: 87833 gggagggagggagggcgaga 87852
>gb|L22180.1|CHTHSPR Chlamydia trachomatis 82 kDa protein gene, 5' end Length = 1900 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ggccgcgaggagcaggagga 155 |||||||||||||||||||| Sbjct: 1420 ggccgcgaggagcaggagga 1401
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 11731336 agggagggagggagggcgag 11731317
>emb|AL731890.2|CNS08C8U Oryza sativa chromosome 12, . BAC OJ1563_B02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 101314 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 25001 agggagggagggagggcgag 25020
>gb|AC133944.4| Mus musculus BAC clone RP24-113L10 from 10, complete sequence Length = 167418 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 142183 agggagggagggagggcgag 142202
>emb|AL596108.13| Mouse DNA sequence from clone RP23-326K2 on chromosome 11, complete sequence Length = 200966 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 agggagggagggagggcgag 202 |||||||||||||||||||| Sbjct: 38627 agggagggagggagggcgag 38646
>gb|AC013489.17| Homo sapiens chromosome 15, clone RP11-97O12, complete sequence Length = 175836 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ctgcagggagggagggaggg 198 |||||||||||||||||||| Sbjct: 7595 ctgcagggagggagggaggg 7576
>gb|M27580.1|CHTOMP3D Chlamydia trachomatis 75 kD membrane protein gene, complete cds Length = 2282 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ggccgcgaggagcaggagga 155 |||||||||||||||||||| Sbjct: 1525 ggccgcgaggagcaggagga 1506
>dbj|AP005272.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-172F10, complete sequence Length = 164943 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 gtggggctaccattgtggat 431 |||||||||||||||||||| Sbjct: 34453 gtggggctaccattgtggat 34434
>dbj|AP001999.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-469N6, complete sequence Length = 172504 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 gaaaatgatcttcatgagtt 295 |||||||||||||||||||| Sbjct: 139842 gaaaatgatcttcatgagtt 139861 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,663,297 Number of Sequences: 3902068 Number of extensions: 4663297 Number of successful extensions: 377469 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 376191 Number of HSP's gapped (non-prelim): 1238 length of query: 531 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 508 effective length of database: 17,143,297,704 effective search space: 8708795233632 effective search space used: 8708795233632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)