ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd22h22 |
|---|---|
| Clone Library Name | barley_pub |
>3HIDH_ARATH (Q9SUC0) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 347 Score = 43.1 bits (100), Expect(2) = 2e-06 Identities = 19/36 (52%), Positives = 25/36 (69%) Frame = +2 Query: 536 YSSAPALPPHMESVGFIGLGNMGSHMARNLVRAGYR 643 +SS+ ++VGFIGLGNMG M NL+RAGY+ Sbjct: 27 FSSSSQNSNQFQNVGFIGLGNMGFRMVNNLIRAGYK 62 Score = 28.1 bits (61), Expect(2) = 2e-06 Identities = 11/19 (57%), Positives = 15/19 (78%) Frame = +3 Query: 642 EVSVHDINEDAMKKFSDDG 698 +V+VHDIN D MK F++ G Sbjct: 62 KVTVHDINRDVMKMFTEMG 80
>3HIDH_MOUSE (Q99L13) 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 335 Score = 42.4 bits (98), Expect = 0.001 Identities = 25/49 (51%), Positives = 29/49 (59%), Gaps = 3/49 (6%) Frame = +2 Query: 503 WDWESRLRARGYSSAPALPPHMES---VGFIGLGNMGSHMARNLVRAGY 640 W W R R G S A M S VGFIGLGNMG+ MA+NL++ GY Sbjct: 15 WYWSGRRRPVG-SLAAVCSRSMASKTPVGFIGLGNMGNPMAKNLMKHGY 62
>3HIDH_HUMAN (P31937) 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 336 Score = 41.6 bits (96), Expect = 0.002 Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 3/47 (6%) Frame = +2 Query: 509 WESRLRARGYSSAPALPPHMES---VGFIGLGNMGSHMARNLVRAGY 640 W RLR S A + S VGFIGLGNMG+ MA+NL++ GY Sbjct: 17 WSRRLRPAAGSFAAVCSRSVASKTPVGFIGLGNMGNPMAKNLMKHGY 63
>3HIDH_CAEEL (Q9XTI0) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial| (EC 1.1.1.31) (HIBADH) Length = 299 Score = 40.8 bits (94), Expect = 0.004 Identities = 17/28 (60%), Positives = 21/28 (75%) Frame = +2 Query: 566 MESVGFIGLGNMGSHMARNLVRAGYRSV 649 M GFIGLGNMG HMARNL++ G + + Sbjct: 1 MSLTGFIGLGNMGGHMARNLIKNGKKLI 28
>3HIDH_DROME (Q9V8M5) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 324 Score = 40.0 bits (92), Expect = 0.007 Identities = 14/25 (56%), Positives = 24/25 (96%) Frame = +2 Query: 569 ESVGFIGLGNMGSHMARNLVRAGYR 643 +++GF+GLGNMG++MA NL++AG++ Sbjct: 29 KNIGFVGLGNMGANMASNLIKAGHK 53
>3HIDH_RAT (P29266) 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 335 Score = 40.0 bits (92), Expect = 0.007 Identities = 24/47 (51%), Positives = 28/47 (59%), Gaps = 3/47 (6%) Frame = +2 Query: 509 WESRLRARGYSSAPALPPHMES---VGFIGLGNMGSHMARNLVRAGY 640 W R R G S A M S VGFIGLGNMG+ MA+NL++ GY Sbjct: 17 WSGRRRPVG-SLAAVCSRSMASKTPVGFIGLGNMGNPMAKNLIKHGY 62
>3HIDH_RABIT (P32185) 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) (HIBADH)| (Fragment) Length = 35 Score = 38.1 bits (87), Expect = 0.026 Identities = 16/22 (72%), Positives = 20/22 (90%) Frame = +2 Query: 575 VGFIGLGNMGSHMARNLVRAGY 640 VGFIGLGNMG+ MA+NL++ GY Sbjct: 6 VGFIGLGNMGNPMAKNLMKHGY 27
>MMSB_PSEAE (P28811) 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) (HIBADH)| Length = 298 Score = 37.0 bits (84), Expect = 0.058 Identities = 15/26 (57%), Positives = 20/26 (76%) Frame = +2 Query: 566 MESVGFIGLGNMGSHMARNLVRAGYR 643 M + F+GLGNMG MA NL++AG+R Sbjct: 1 MTDIAFLGLGNMGGPMAANLLKAGHR 26
>GARR_ECOLI (P0ABQ2) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)| (Tartronate semialdehyde reductase) (TSAR) Length = 294 Score = 35.8 bits (81), Expect = 0.13 Identities = 16/25 (64%), Positives = 20/25 (80%) Frame = +2 Query: 575 VGFIGLGNMGSHMARNLVRAGYRSV 649 VGFIGLG MG M++NL++AGY V Sbjct: 3 VGFIGLGIMGKPMSKNLLKAGYSLV 27
>GARR_ECOL6 (P0ABQ3) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)| (Tartronate semialdehyde reductase) (TSAR) Length = 294 Score = 35.8 bits (81), Expect = 0.13 Identities = 16/25 (64%), Positives = 20/25 (80%) Frame = +2 Query: 575 VGFIGLGNMGSHMARNLVRAGYRSV 649 VGFIGLG MG M++NL++AGY V Sbjct: 3 VGFIGLGIMGKPMSKNLLKAGYSLV 27
>MMSB_MYCTU (P63935) Probable 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)| (HIBADH) Length = 294 Score = 34.3 bits (77), Expect = 0.37 Identities = 14/25 (56%), Positives = 20/25 (80%) Frame = +2 Query: 566 MESVGFIGLGNMGSHMARNLVRAGY 640 M ++ F+GLGNMG+ M+ NLV AG+ Sbjct: 1 MTTIAFLGLGNMGAPMSANLVGAGH 25
>MMSB_MYCBO (P63936) Probable 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)| (HIBADH) Length = 294 Score = 34.3 bits (77), Expect = 0.37 Identities = 14/25 (56%), Positives = 20/25 (80%) Frame = +2 Query: 566 MESVGFIGLGNMGSHMARNLVRAGY 640 M ++ F+GLGNMG+ M+ NLV AG+ Sbjct: 1 MTTIAFLGLGNMGAPMSANLVGAGH 25
>YIHU_SHIFL (P0A9V9) Hypothetical oxidoreductase yihU (EC 1.1.-.-)| Length = 298 Score = 33.5 bits (75), Expect = 0.64 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = +2 Query: 566 MESVGFIGLGNMGSHMARNLVRAGYR 643 M ++ FIGLG MGS MA NL++ G++ Sbjct: 1 MAAIAFIGLGQMGSPMASNLLQQGHQ 26
>YIHU_ECOLI (P0A9V8) Hypothetical oxidoreductase yihU (EC 1.1.-.-)| Length = 298 Score = 33.5 bits (75), Expect = 0.64 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = +2 Query: 566 MESVGFIGLGNMGSHMARNLVRAGYR 643 M ++ FIGLG MGS MA NL++ G++ Sbjct: 1 MAAIAFIGLGQMGSPMASNLLQQGHQ 26
>GLXR_ECOLI (P77161) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)| (Tartronate semialdehyde reductase) (TSAR) Length = 292 Score = 33.1 bits (74), Expect = 0.83 Identities = 15/23 (65%), Positives = 19/23 (82%) Frame = +2 Query: 575 VGFIGLGNMGSHMARNLVRAGYR 643 +GFIGLG MG+ MA NL RAG++ Sbjct: 3 LGFIGLGIMGTPMAINLARAGHQ 25
>Y229_SYNY3 (Q55702) Hypothetical oxidoreductase slr0229 (EC 1.1.-.-)| Length = 290 Score = 32.7 bits (73), Expect = 1.1 Identities = 14/29 (48%), Positives = 21/29 (72%) Frame = +2 Query: 563 HMESVGFIGLGNMGSHMARNLVRAGYRSV 649 ++ + GLG MGS MA+NLV+ GY++V Sbjct: 2 NVSKIAVFGLGVMGSPMAQNLVKNGYQTV 30
>YIHU_SALTY (Q9L7S0) Hypothetical oxidoreductase yihU (EC 1.1.-.-)| Length = 298 Score = 32.7 bits (73), Expect = 1.1 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +2 Query: 566 MESVGFIGLGNMGSHMARNLVRAGYR 643 M + FIGLG MGS MA NL++ G++ Sbjct: 1 MAVIAFIGLGQMGSPMASNLLKQGHQ 26
>IMMT_DROME (P91928) Putative mitochondrial inner membrane protein| Length = 841 Score = 32.0 bits (71), Expect = 1.9 Identities = 21/71 (29%), Positives = 31/71 (43%) Frame = +2 Query: 371 CFLQQTVLDSDSTDTVIPDR*QPRASMGGVGWRRLGSKLQQRWGWDWESRLRARGYSSAP 550 C LQ+T+ + + + Q S G G R G + Q+ G + +GY Sbjct: 114 CALQRTLQQTTANNR------QFGGSSSGSGGREQGRRQQEEQGQQGD-----QGYQGYQ 162 Query: 551 ALPPHMESVGF 583 +LPPHM GF Sbjct: 163 SLPPHMREAGF 173
>ITIH4_HUMAN (Q14624) Inter-alpha-trypsin inhibitor heavy chain H4 precursor| (ITI heavy chain H4) (Inter-alpha-inhibitor heavy chain 4) (Inter-alpha-trypsin inhibitor family heavy chain-related protein) (IHRP) (Plasma kallikrein sensitive glycoprotein 120 Length = 930 Score = 32.0 bits (71), Expect = 1.9 Identities = 21/54 (38%), Positives = 25/54 (46%) Frame = -1 Query: 607 GAHIPKPYESNALHVGWKRRSGRVAPGAEAALPVPAPSLLQLGTKPPPSNTAHA 446 GA IPKP S + GW R++G A G+ S QLG PP HA Sbjct: 631 GAKIPKPEASFSPRRGWNRQAG--AAGSRMNFRPGVLSSRQLGLPGPPDVPDHA 682
>TP53B_MOUSE (P70399) Tumor suppressor p53-binding protein 1 (p53-binding protein| 1) (p53BP1) (53BP1) Length = 1957 Score = 32.0 bits (71), Expect = 1.9 Identities = 18/44 (40%), Positives = 21/44 (47%) Frame = -2 Query: 375 KHKRKTSEPTHASSERGRTQATHGRGGRGFTHSVSPCRLAVKIG 244 K K TSE + ++RGR AT G G VSPC IG Sbjct: 1652 KRKLPTSEEERSPAKRGRKSATVKPGTVGAAEFVSPCETGDNIG 1695
>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2| Length = 964 Score = 27.3 bits (59), Expect(2) = 1.9 Identities = 14/21 (66%), Positives = 15/21 (71%) Frame = -2 Query: 351 PTHASSERGRTQATHGRGGRG 289 P H SS+ G QAT GRGGRG Sbjct: 271 PKHQSSQIG--QATTGRGGRG 289 Score = 23.1 bits (48), Expect(2) = 1.9 Identities = 16/49 (32%), Positives = 19/49 (38%) Frame = -1 Query: 550 RSGRVAPGAEAALPVPAPSLLQLGTKPPPSNTAHARSRLLSIRYHRISG 404 R G A AA P P P + P P N A S+ + HR G Sbjct: 184 RPGGSAGLPSAARPGPRPGAGRRTGAPRPGNNPFASSQGMGQSRHRSEG 232
>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein| Length = 1509 Score = 31.6 bits (70), Expect = 2.4 Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 12/77 (15%) Frame = -1 Query: 646 TSVSSPHQVPCHVGAHIPKPYESNALHVGWKRRSGRVAPGAEAAL----PVPAPSLL--- 488 +S S PHQ P H+P P+ + R P +E L P AP L Sbjct: 724 SSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPCPPPQAPPTLPGI 783 Query: 487 -----QLGTKPPPSNTA 452 QLG PP SN A Sbjct: 784 FVIQNQLGVPPPASNPA 800
>PO3F3_HUMAN (P20264) POU domain, class 3, transcription factor 3| (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein) Length = 500 Score = 31.6 bits (70), Expect = 2.4 Identities = 18/62 (29%), Positives = 30/62 (48%) Frame = -1 Query: 628 HQVPCHVGAHIPKPYESNALHVGWKRRSGRVAPGAEAALPVPAPSLLQLGTKPPPSNTAH 449 H+ P H+G P P++ + GW + A A AA PS+ G +PPP + + Sbjct: 166 HRGPPHLGPPPPPPHQGHP--GGWGAAAAAAAAAAAAAAAAHLPSMAG-GQQPPPQSLLY 222 Query: 448 AR 443 ++ Sbjct: 223 SQ 224
>4ET_HUMAN (Q9NRA8) Eukaryotic translation initiation factor 4E transporter| (eIF4E transporter) (4E-T) (Eukaryotic translation initiation factor 4E nuclear import factor 1) Length = 985 Score = 31.6 bits (70), Expect = 2.4 Identities = 21/60 (35%), Positives = 29/60 (48%) Frame = -1 Query: 628 HQVPCHVGAHIPKPYESNALHVGWKRRSGRVAPGAEAALPVPAPSLLQLGTKPPPSNTAH 449 HQVP + H+P ++ LH G +R A+ P PSLLQ G PP + +H Sbjct: 809 HQVP--LVPHVPMVRPAHQLHPGLVQRML-----AQGVHPQHLPSLLQTGVLPPGMDLSH 861
>PO3F3_RAT (Q63262) POU domain, class 3, transcription factor 3| (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein) Length = 497 Score = 31.6 bits (70), Expect = 2.4 Identities = 18/62 (29%), Positives = 30/62 (48%) Frame = -1 Query: 628 HQVPCHVGAHIPKPYESNALHVGWKRRSGRVAPGAEAALPVPAPSLLQLGTKPPPSNTAH 449 H+ P H+G P P++ + GW + A A AA PS+ G +PPP + + Sbjct: 165 HRGPPHLGPPPPPPHQGHP--GGWGAAAAAAAAAAAAAAAAHLPSMAG-GQQPPPQSLLY 221 Query: 448 AR 443 ++ Sbjct: 222 SQ 223
>PO3F3_MOUSE (P31361) POU domain, class 3, transcription factor 3| (Brain-specific homeobox/POU domain protein 1) (Brain-1) (Brn-1 protein) Length = 495 Score = 31.6 bits (70), Expect = 2.4 Identities = 18/62 (29%), Positives = 30/62 (48%) Frame = -1 Query: 628 HQVPCHVGAHIPKPYESNALHVGWKRRSGRVAPGAEAALPVPAPSLLQLGTKPPPSNTAH 449 H+ P H+G P P++ + GW + A A AA PS+ G +PPP + + Sbjct: 163 HRGPPHLGPPPPPPHQGHP--GGWGAAAAAAAAAAAAAAAAHLPSMAG-GQQPPPQSLLY 219 Query: 448 AR 443 ++ Sbjct: 220 SQ 221
>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional| activator IE175) (Alpha-4 protein) Length = 1298 Score = 30.8 bits (68), Expect = 4.1 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -1 Query: 553 RRSGRVAPGAEA--ALPVPAPSLLQLGTKPPPSNTAHARSRLLSIR 422 ++SG APG++A LP PAP G +P P+ A R+ R Sbjct: 749 KKSGADAPGSDARAPLPAPAPPSTPPGPEPAPAQPAAPRAAAAQAR 794
>PO6F2_MOUSE (Q8BJI4) POU domain, class 6, transcription factor 2| Length = 691 Score = 30.4 bits (67), Expect = 5.4 Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 6/128 (4%) Frame = -1 Query: 652 TDTSVSSPHQVPCHVGAHIPKPYESNALHVGWKRRSGRVAPGAEAALPVPAPSLLQLGTK 473 T PH P + + P P + ++ + +PG P+ P+ LQL Sbjct: 244 TQPQQHQPHSHPQNQTQNQPSPTQQSSS----PPQKPSPSPGHSLPSPLTPPNPLQLVNN 299 Query: 472 PPPSNTAHARSRLLSIRYHRISG------VGVQDCLLQETQAENIRTNPCVVGEGKDPSD 311 P S A A + + SI + G GV L+ Q + I T P + G S Sbjct: 300 PLASQAAAAAAAMGSIASSQAFGNALSSLQGVTGQLVTNAQGQIIGTIPLMPNPGPS-SQ 358 Query: 310 AREGREGI 287 A G +G+ Sbjct: 359 AASGTQGL 366
>IASPP_HUMAN (Q8WUF5) RelA-associated inhibitor (Inhibitor of ASPP protein)| (Protein iASPP) (PPP1R13B-like protein) (NFkB-interacting protein 1) Length = 828 Score = 30.0 bits (66), Expect = 7.1 Identities = 30/106 (28%), Positives = 42/106 (39%) Frame = -1 Query: 595 PKPYESNALHVGWKRRSGRVAPGAEAALPVPAPSLLQLGTKPPPSNTAHARSRLLSIRYH 416 P+P E + + G + R+G AP A +P PAPS +P + S R Sbjct: 562 PEP-ELSPITEGSEARAGPPAPAPPAPIPPPAPSQSSPPEQPQSMEMRSVLRKAGSPRKA 620 Query: 415 RISGVGVQDCLLQETQAENIRTNPCVVGEGKDPSDAREGREGIHSL 278 R + + LL + V E DPS E EGI +L Sbjct: 621 RRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNE--EGITAL 664
>RFA1_XENLA (Q01588) Replication protein A 70 kDa DNA-binding subunit (RP-A)| (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (p70) Length = 609 Score = 30.0 bits (66), Expect = 7.1 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -1 Query: 535 APGAEAALPVPAPSLLQLGTKPPPS 461 A A A+ P PAPS LQ + PPPS Sbjct: 126 AAPAPASAPAPAPSKLQNNSAPPPS 150
>RHLB_XANAC (Q8PFZ3) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 571 Score = 30.0 bits (66), Expect = 7.1 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 6/56 (10%) Frame = -1 Query: 643 SVSSPHQVPCHVGAHIPKPYESNALHVGWKRR---SGRVAPGAEAAL---PVPAPS 494 + S+ H V V A P ++A KRR +GR GAE AL PVPAP+ Sbjct: 476 AASTEHPVVAAVAAQAPSAGVADAERAPRKRRRRRNGRPVEGAEPALASTPVPAPA 531
>UBA3_PONPY (Q5R4A0) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 463 Score = 29.6 bits (65), Expect = 9.2 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 16/64 (25%) Frame = +2 Query: 506 DWESR-------LRARGYSSAPALPPHMESVGF---------IGLGNMGSHMARNLVRAG 637 DWE R L G + P P ES+ F IG G +G + +NL +G Sbjct: 33 DWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSG 92 Query: 638 YRSV 649 +R + Sbjct: 93 FRQI 96
>UBA3_HUMAN (Q8TBC4) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 463 Score = 29.6 bits (65), Expect = 9.2 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 16/64 (25%) Frame = +2 Query: 506 DWESR-------LRARGYSSAPALPPHMESVGF---------IGLGNMGSHMARNLVRAG 637 DWE R L G + P P ES+ F IG G +G + +NL +G Sbjct: 33 DWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSG 92 Query: 638 YRSV 649 +R + Sbjct: 93 FRQI 96
>TCGAP_HUMAN (O14559) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)| Length = 1287 Score = 29.6 bits (65), Expect = 9.2 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = -1 Query: 544 GRVAPGAEAALPVPAPSLLQLGTKPPPSNTAHARSRLLSI 425 G + P E+ LP P SLL+ G PPP AR L++ Sbjct: 865 GPLGPDMESPLPPPPLSLLRPGGAPPPPPKNPARLMALAL 904
>RPOA_EAVBU (P19811) Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes:| Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1 papain-like cysteine proteinase (EC 3.4.22.-) (PCP); Nsp2 cysteine proteinase (EC 3.4.22.-) (CP2) (CP); Nonstructural protein Length = 3175 Score = 29.6 bits (65), Expect = 9.2 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 3/79 (3%) Frame = -1 Query: 571 LHVGWKRRSGRVAPGAEAALPVPAPSLLQLGTKPPPSNTAHARSRLLSIR---YHRISGV 401 L+V WKR G G + V A + S T R + + Y+R++ Sbjct: 747 LNVMWKRPIGSTVLGEQTGAVVTAVKSISFSPPCCVSTTLPTRPGVTVVDHALYNRLTAS 806 Query: 400 GVQDCLLQETQAENIRTNP 344 GV LL+ Q + ++ NP Sbjct: 807 GVDPALLRVGQGDFLKLNP 825
>UBA3_RAT (Q99MI7) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 462 Score = 29.6 bits (65), Expect = 9.2 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 16/64 (25%) Frame = +2 Query: 506 DWESR-------LRARGYSSAPALPPHMESVGF---------IGLGNMGSHMARNLVRAG 637 DWE R L G + P P ES+ F IG G +G + +NL +G Sbjct: 33 DWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSG 92 Query: 638 YRSV 649 +R + Sbjct: 93 FRQI 96
>UBA3_MOUSE (Q8C878) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme 3) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) Length = 462 Score = 29.6 bits (65), Expect = 9.2 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 16/64 (25%) Frame = +2 Query: 506 DWESR-------LRARGYSSAPALPPHMESVGF---------IGLGNMGSHMARNLVRAG 637 DWE R L G + P P ES+ F IG G +G + +NL +G Sbjct: 33 DWEGRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSG 92 Query: 638 YRSV 649 +R + Sbjct: 93 FRQI 96
>PHC3_MOUSE (Q8CHP6) Polyhomeotic-like protein 3| Length = 981 Score = 29.6 bits (65), Expect = 9.2 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 5/84 (5%) Frame = -1 Query: 604 AHIPKPYESNALHVGWKRRSGRVAPGAEAALPVPAPSLLQLGTKP-----PPSNTAHARS 440 +H+P P S +H+G ++S V+PG + P L + P PP +A + Sbjct: 451 SHLPLP-ASPVVHIGPVQQSALVSPGQQMVSPTSHQQYSALQSSPIPIATPPQMSASPPA 509 Query: 439 RLLSIRYHRISGVGVQDCLLQETQ 368 +L + + + VQ +L + Q Sbjct: 510 QLPPLPLQSMQSLQVQPEILSQGQ 533
>PROC_TREPA (P27771) Pyrroline-5-carboxylate reductase (EC 1.5.1.2) (P5CR) (P5C| reductase) Length = 263 Score = 29.6 bits (65), Expect = 9.2 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = +2 Query: 572 SVGFIGLGNMGSHMARNLVRAGYRSVSS*YK*GCHEEVL 688 +VGF+G G MG +A LV AG + Y ++E L Sbjct: 2 NVGFLGFGAMGRALAEGLVHAGALQAAQVYACALNQEKL 40 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 103,309,570 Number of Sequences: 219361 Number of extensions: 2267741 Number of successful extensions: 7659 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 7174 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7650 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
