>ref|XM_483348.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2343

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Plus

                                                                        
Query: 470  gaatgaatctaccacttactctgcagacgccaatgccatgatgaccatccagatgaaatt 529
            |||||||||| ||||||| |||| ||||||  || | ||||||| ||||||||  || ||
Sbjct: 1401 gaatgaatcttccacttattctgaagacgcacattctatgatgatcatccagacaaagtt 1460

                                                   
Query: 530  ctctgtgaagaagaattgggtgggtgatccatgctcccc 568
             ||||||||||  || ||||  |||||||||||||||||
Sbjct: 1461 ttctgtgaagagaaactgggcaggtgatccatgctcccc 1499

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 537      aagaagaattgggtgggtgatccatgctcccc 568
                |||||||||||| ||||||||||||| |||||
Sbjct: 11527988 aagaagaattggatgggtgatccatgttcccc 11527957



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                                
Query: 537      aagaagaattgggtgggtgatccatgctcccc 568
                |||||||||||| ||||||||||||| |||||
Sbjct: 11438356 aagaagaattggatgggtgatccatgttcccc 11438325



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 537      aagaagaattgggtgggtgatccatg 562
                |||||||||||| |||||||||||||
Sbjct: 10971932 aagaagaattggatgggtgatccatg 10971957

>dbj|AP005836.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0013F08
          Length = 166989

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 537   aagaagaattgggtgggtgatccatgctcccc 568
             |||||||||||| ||||||||||||| |||||
Sbjct: 43995 aagaagaattggatgggtgatccatgttcccc 43964

>dbj|AP006526.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0591A03
          Length = 147043

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 537   aagaagaattgggtgggtgatccatgctcccc 568
             |||||||||||| ||||||||||||| |||||
Sbjct: 72044 aagaagaattggatgggtgatccatgttcccc 72013

>dbj|AK120189.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034P20, full
            insert sequence
          Length = 2860

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 537  aagaagaattgggtgggtgatccatgctcccc 568
            |||||||||||| ||||||||||||| |||||
Sbjct: 1159 aagaagaattggatgggtgatccatgttcccc 1190

>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075A10,
              complete sequence
          Length = 171101

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 534    gtgaagaagaattgggtgggtgatcc 559
              ||||||||||||||| ||||||||||
Sbjct: 170334 gtgaagaagaattggatgggtgatcc 170359

>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11,
             complete sequence
          Length = 112065

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 534   gtgaagaagaattgggtgggtgatcc 559
             ||||||||||||||| ||||||||||
Sbjct: 33030 gtgaagaagaattggatgggtgatcc 33055

>gb|AC026826.7| Homo sapiens, clone RP11-591L14, complete sequence
          Length = 169462

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 359    cacctggactgtgccaaggtcaagcc 384
              ||||||||||||||||||| ||||||
Sbjct: 100200 cacctggactgtgccaaggacaagcc 100175

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                            
Query: 507      atgatgaccatccagatgaaattctctgtgaagaagaattgggtgggtgatccatgctcc 566
                ||||||| ||||||||  || || ||||||||||  || ||||  |||||||||||||||
Sbjct: 25732406 atgatgatcatccagacaaagttttctgtgaagagaaactgggcaggtgatccatgctcc 25732465

                  
Query: 567      cc 568
                ||
Sbjct: 25732466 cc 25732467

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 534      gtgaagaagaattgggtgggtgatcc 559
                ||||||||||||||| ||||||||||
Sbjct: 25928802 gtgaagaagaattggatgggtgatcc 25928827

>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0689E12
          Length = 147516

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 507  atgatgaccatccagatgaaattctctgtgaagaagaattgggtgggtgatccatgctcc 566
            ||||||| ||||||||  || || ||||||||||  || ||||  |||||||||||||||
Sbjct: 4617 atgatgatcatccagacaaagttttctgtgaagagaaactgggcaggtgatccatgctcc 4676

              
Query: 567  cc 568
            ||
Sbjct: 4677 cc 4678

>dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0698G06
          Length = 138282

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 537    aagaagaattgggtgggtgatccatg 562
              |||||||||||| |||||||||||||
Sbjct: 111637 aagaagaattggatgggtgatccatg 111662

>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0700D12
          Length = 145177

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                          
Query: 507    atgatgaccatccagatgaaattctctgtgaagaagaattgggtgggtgatccatgctcc 566
              ||||||| ||||||||  || || ||||||||||  || ||||  |||||||||||||||
Sbjct: 110154 atgatgatcatccagacaaagttttctgtgaagagaaactgggcaggtgatccatgctcc 110213

                
Query: 567    cc 568
              ||
Sbjct: 110214 cc 110215

>emb|CT025560.9| Mouse DNA sequence from clone RP23-432N22 on chromosome 16, complete
             sequence
          Length = 212903

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 437   cagtggcatggagatatatat 457
             |||||||||||||||||||||
Sbjct: 25603 cagtggcatggagatatatat 25583

>gb|AC136716.12| Mus musculus, clone RP23-42E21, complete sequence
          Length = 259603

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 437   cagtggcatggagatatatat 457
             |||||||||||||||||||||
Sbjct: 14061 cagtggcatggagatatatat 14081

>gb|AC158943.9| Mus musculus chromosome 1, clone RP24-272N10, complete sequence
          Length = 186003

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   taggcacttcaatgtttcag 300
             ||||||||||||||||||||
Sbjct: 68815 taggcacttcaatgtttcag 68834

>gb|AC182584.3| Pan troglodytes BAC clone CH251-530K15 from chromosome 2, complete
             sequence
          Length = 206103

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 486   tactctgcagacgccaatgccatg 509
             |||||||||||||| |||||||||
Sbjct: 70846 tactctgcagacgcaaatgccatg 70869

>gb|AC112147.5| Mus musculus BAC clone RP23-175E16 from 9, complete sequence
          Length = 202928

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   attcatccttgacccttgac 218
             ||||||||||||||||||||
Sbjct: 94491 attcatccttgacccttgac 94472

>emb|AL353765.3| Human DNA sequence from clone RP11-429G17 on chromosome 13 Contains a
              ras-related C3 botulinum toxin substrate 1 (rho family,
              small GTP binding protein Rac1) (RAC1) pseudogene, complete
              sequence
          Length = 164831

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 474    gaatctaccacttactctgcagac 497
              ||||||||||||| ||||||||||
Sbjct: 132116 gaatctaccacttcctctgcagac 132139

>gb|AC104890.16| Mus musculus chromosome 1, clone RP23-260J11, complete sequence
          Length = 211081

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 281    taggcacttcaatgtttcag 300
              ||||||||||||||||||||
Sbjct: 173632 taggcacttcaatgtttcag 173651

>emb|CR933104.2| Medicago truncatula chromosome 5 clone mth2-25b3, COMPLETE SEQUENCE
          Length = 117135

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 282   aggcacttcaatgtttcagtggat 305
             ||||||||||||||||| ||||||
Sbjct: 46703 aggcacttcaatgtttctgtggat 46680

>gb|AC183099.3| Pan troglodytes BAC clone CH251-727F5 from chromosome 2, complete
             sequence
          Length = 183714

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 486   tactctgcagacgccaatgccatg 509
             |||||||||||||| |||||||||
Sbjct: 27191 tactctgcagacgcaaatgccatg 27214

>gb|AC021483.11| Homo sapiens, clone RP11-38G5, complete sequence
          Length = 163065

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 361   cctggactgtgccaaggtcaagcc 384
             ||||||||||||||||| ||||||
Sbjct: 17890 cctggactgtgccaaggacaagcc 17867

>gb|AC034299.8| Homo sapiens chromosome 18, clone RP11-500P9, complete sequence
          Length = 130795

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 349   ctagtgttctcacctggactgtgc 372
             |||||||||||||||| |||||||
Sbjct: 32910 ctagtgttctcacctgaactgtgc 32933

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 535      tgaagaagaattgggtgggtgatccatg 562
                |||||||||||||| |||| ||||||||
Sbjct: 23374552 tgaagaagaattggatgggggatccatg 23374525

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 535      tgaagaagaattgggtgggtgatccatg 562
                |||||||||||||| |||| ||||||||
Sbjct: 23302743 tgaagaagaattggatgggggatccatg 23302716

>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 162261

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 535    tgaagaagaattgggtgggtgatccatg 562
              |||||||||||||| |||| ||||||||
Sbjct: 127607 tgaagaagaattggatgggggatccatg 127634

>emb|AL935115.6| Zebrafish DNA sequence from clone CH211-199D18, complete sequence
          Length = 187326

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 575   ttttgcatgggatggcttgg 594
             ||||||||||||||||||||
Sbjct: 71272 ttttgcatgggatggcttgg 71253


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,865,401
Number of Sequences: 3902068
Number of extensions: 4865401
Number of successful extensions: 77668
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77492
Number of HSP's gapped (non-prelim): 176
length of query: 624
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 601
effective length of database: 17,143,297,704
effective search space: 10303121920104
effective search space used: 10303121920104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)