>ALR1_STAAW (P63481) Alanine racemase 1 (EC 5.1.1.1)|
          Length = 382

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
 Frame = +3

Query: 165 IRIFSLAAILCLFGILPVHYLARKTQH---LEIPSEQLHMFTVQNVE-VQSRWLWVH 323
           +R+  + A + + G+LP   + +  QH   L +PS+Q     ++N+   Q + LW+H
Sbjct: 73  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLH 129

>ALR1_STAAU (Q9ZAH5) Alanine racemase 1 (EC 5.1.1.1)|
          Length = 382

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
 Frame = +3

Query: 165 IRIFSLAAILCLFGILPVHYLARKTQH---LEIPSEQLHMFTVQNVE-VQSRWLWVH 323
           +R+  + A + + G+LP   + +  QH   L +PS+Q     ++N+   Q + LW+H
Sbjct: 73  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLH 129

>ALR1_STAAS (Q6G7N9) Alanine racemase 1 (EC 5.1.1.1)|
          Length = 382

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
 Frame = +3

Query: 165 IRIFSLAAILCLFGILPVHYLARKTQH---LEIPSEQLHMFTVQNVE-VQSRWLWVH 323
           +R+  + A + + G+LP   + +  QH   L +PS+Q     ++N+   Q + LW+H
Sbjct: 73  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLH 129

>ALR1_STAAR (Q6GF03) Alanine racemase 1 (EC 5.1.1.1)|
          Length = 382

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
 Frame = +3

Query: 165 IRIFSLAAILCLFGILPVHYLARKTQH---LEIPSEQLHMFTVQNVE-VQSRWLWVH 323
           +R+  + A + + G+LP   + +  QH   L +PS+Q     ++N+   Q + LW+H
Sbjct: 73  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLH 129

>ALR1_STAAN (P63480) Alanine racemase 1 (EC 5.1.1.1)|
          Length = 382

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
 Frame = +3

Query: 165 IRIFSLAAILCLFGILPVHYLARKTQH---LEIPSEQLHMFTVQNVE-VQSRWLWVH 323
           +R+  + A + + G+LP   + +  QH   L +PS+Q     ++N+   Q + LW+H
Sbjct: 73  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLH 129

>ALR1_STAAM (P63479) Alanine racemase 1 (EC 5.1.1.1)|
          Length = 382

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
 Frame = +3

Query: 165 IRIFSLAAILCLFGILPVHYLARKTQH---LEIPSEQLHMFTVQNVE-VQSRWLWVH 323
           +R+  + A + + G+LP   + +  QH   L +PS+Q     ++N+   Q + LW+H
Sbjct: 73  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLH 129

>ALR1_STAAC (Q5HED1) Alanine racemase 1 (EC 5.1.1.1)|
          Length = 382

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
 Frame = +3

Query: 165 IRIFSLAAILCLFGILPVHYLARKTQH---LEIPSEQLHMFTVQNVE-VQSRWLWVH 323
           +R+  + A + + G+LP   + +  QH   L +PS+Q     ++N+   Q + LW+H
Sbjct: 73  LRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLH 129

>PARP4_HUMAN (Q9UKK3) Poly [ADP-ribose] polymerase 4 (EC 2.4.2.30) (PARP-4)|
           (Vault poly(ADP-ribose) polymerase) (VPARP) (193-kDa
           vault protein) (PARP-related/IalphaI-related
           H5/proline-rich) (PH5P)
          Length = 1724

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +1

Query: 154 LCSAYASFP*PPSCAFLGFFRCIIWHERRNTLRFLR 261
           +C    S P PPS A     RC I H  +NT  FLR
Sbjct: 359 VCETNLSKPNPPSLAKYRALRCKIEHVEQNTEEFLR 394

>GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)|
          Length = 1008

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = -1

Query: 167 YAEHKHPVESNSVQPSSCQEIFLGTLQGLDDPA-GGRNKPLQDEGLPGAA 21
           Y+  +HPV S  V P+S +++ L  L G  DP   G+  P+  E +  A+
Sbjct: 261 YSGKEHPVSSEKVAPTSAEKVDL-VLSGKRDPGPSGKADPVPLESMDSAS 309

>ATG9_KLULA (Q6CT08) Autophagy-related protein 9|
          Length = 908

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = -1

Query: 320 NPKPSRLHFHILNCEHMQLFRRNLKVLRLSCQIMHRKNPKKAQDGG*GKDAYAEHKHPVE 141
           NP  SR+   +L     ++FR N +   L    + RK P  A+  G GK  +   K P  
Sbjct: 184 NPSESRVFERLLGNSPAKMFRNNGRPNNLEESFLFRK-PSVAEQSGPGKSTHFNLKPPPI 242

Query: 140 SNSV 129
            N++
Sbjct: 243 FNNI 246

>MSBA_XANAC (Q8PKS5) Lipid A export ATP-binding/permease protein msbA|
          Length = 589

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +3

Query: 276 FTVQNVEVQSRWLWVHSVVLYIISGVACFLLYVEYGHIA 392
           F  +N EV SRWL V  ++L+++ GVA ++  +  G  A
Sbjct: 60  FIYKNAEV-SRWLPVQIILLFVVRGVAGYITDMAMGKSA 97


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,199,849
Number of Sequences: 219361
Number of extensions: 1723256
Number of successful extensions: 4103
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4103
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)