ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd22f13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103521.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 3e-33
2dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 96 1e-16
4emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559... 96 1e-16
5emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268... 96 1e-16
6ref|XM_506914.1| PREDICTED Oryza sativa (japonica cultivar-group... 44 0.47
7ref|XM_469245.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.47
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.47
9gb|AC090683.7| Oryza sativa chromosome 3 BAC OSJNBa0035I24 genom... 44 0.47
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.47
11dbj|AK103691.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.47
12emb|AL954726.31| Zebrafish DNA sequence from clone CH211-274A9 i... 42 1.8
13gb|AC135417.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
14gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
15gb|AC125252.7| Mus musculus chromosome 5, clone RP23-388M10, com... 40 7.3
16gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 7.3
17gb|AC160469.5| Mus musculus chromosome 5, clone RP23-318I19, com... 40 7.3
18gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 7.3
19emb|Z70306.1|CEC06G8 Caenorhabditis elegans Cosmid C06G8, comple... 40 7.3
20emb|AL512271.10| Human DNA sequence from clone RP11-74K19 on chr... 40 7.3
21gb|AC129926.4| Homo sapiens chromosome 17, clone RP11-663N22, co... 40 7.3
22ref|XM_786692.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.3
23emb|AL603925.20| Mouse DNA sequence from clone RP23-175K24 on ch... 40 7.3
24gb|AC069061.11| Homo sapiens chromosome 17, clone RP11-260A9, co... 40 7.3
25gb|AC087297.13| Homo sapiens chromosome 17, clone RP11-362P24, c... 40 7.3
26ref|NM_069597.2| Caenorhabditis elegans T25B9.9 (T25B9.9) mRNA, ... 40 7.3
27dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
28gb|AC092646.2| Homo sapiens BAC clone RP11-415D20 from 2, comple... 40 7.3
29dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 40 7.3
30emb|AL929113.9| Mouse DNA sequence from clone RP23-424D23 on chr... 40 7.3
31gb|AC108848.12| Mus musculus chromosome 5, clone RP23-300K5, com... 40 7.3
32emb|AL732469.8| Mouse DNA sequence from clone RP23-434B15 on chr... 40 7.3
33dbj|AP001094.6| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 7.3 
>dbj|AK103521.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131J04, full
            insert sequence
          Length = 3054

 Score =  151 bits (76), Expect = 3e-33
 Identities = 208/252 (82%)
 Strand = Plus / Plus

                                                                        
Query: 287  gaatgtggaagtgcaatctagatggctttgggttcattctgtagtcctctacataatatc 346
            ||||||| |||||  ||| |||||||||||||| |||| ||||| | | |||||||||||
Sbjct: 821  gaatgtgaaagtgagatcaagatggctttgggtccattgtgtagccttgtacataatatc 880

                                                                        
Query: 347  tggagtagcttgctttctcctatatgtggagtatgggcacattgctaggctgaggctcct 406
             |||||||||||| ||||||||||| | |||||   ||||||||||||||||||||||| 
Sbjct: 881  aggagtagcttgcattctcctatatcttgagtacaagcacattgctaggctgaggctccg 940

                                                                        
Query: 407  tcaccttaaacgcacaacactaaatccaggccaatttactgtgcttgttcgcggaatacc 466
            ||| ||||   |  |||  |  |||||| |||| |||||||| |||||||| ||||||||
Sbjct: 941  tcatcttacttgtgcaatgcccaatccaagccattttactgtccttgttcgtggaatacc 1000

                                                                        
Query: 467  aaagacagcaaacgaatcgtgcagtagtgatgtcgatgatttcttcaccaagtatcatgc 526
            ||||  | | || ||||| ||||||| || | | |||||||||||||||||||| |||| 
Sbjct: 1001 aaaggaaaccaaagaatcatgcagtaatgctattgatgatttcttcaccaagtaccatgg 1060

                        
Query: 527  atcaagttacct 538
            |||||| |||||
Sbjct: 1061 atcaagctacct 1072



 Score =  117 bits (59), Expect = 4e-23
 Identities = 131/155 (84%)
 Strand = Plus / Plus

                                                                       
Query: 42  atcttggagaggtttgttccgtccaccggctggatcgtcaaggccctgcagtgtaccgag 101
           ||||||||||| ||||| || || || |||||||| || || ||||||||||||||||||
Sbjct: 576 atcttggagagatttgtaccatctactggctggatagtaaaagccctgcagtgtaccgag 635

                                                                       
Query: 102 gaagatctcttggcagctgctgggctggacgctgttgctttcaacaggatgcttgtgttc 161
           |||||  ||||||| ||||||||||| || ||||||| |||||| || || || || |||
Sbjct: 636 gaagagatcttggctgctgctgggctagatgctgttgttttcaatagaattctagtattc 695

                                              
Query: 162 agcatacgcatcttttccctagccgccatcctgtg 196
           ||| |||||||||| || ||||| ||||| |||||
Sbjct: 696 agcttacgcatcttctctctagctgccattctgtg 730
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                            
Query: 42       atcttggagaggtttgttccgtccaccggctggatcgtcaaggccctgcagtgtaccgag 101
                ||||||||||| ||||| || || || |||||||| || || ||||||||||||||||||
Sbjct: 27195062 atcttggagagatttgtaccatctactggctggatagtaaaagccctgcagtgtaccgag 27195003

                                                            
Query: 102      gaagatctcttggcagctgctgggctggacgctgttgctttcaa 145
                |||||  ||||||| ||||||||||| || ||||||| ||||||
Sbjct: 27195002 gaagagatcttggctgctgctgggctagatgctgttgttttcaa 27194959



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 128/156 (82%)
 Strand = Plus / Minus

                                                                            
Query: 383      gcacattgctaggctgaggctccttcaccttaaacgcacaacactaaatccaggccaatt 442
                ||||||||||||||||||||||| ||| ||||   |  |||  |  |||||| |||| ||
Sbjct: 27194110 gcacattgctaggctgaggctccgtcatcttacttgtgcaatgcccaatccaagccattt 27194051

                                                                            
Query: 443      tactgtgcttgttcgcggaataccaaagacagcaaacgaatcgtgcagtagtgatgtcga 502
                |||||| |||||||| ||||||||||||  | | || ||||| ||||||| || | | ||
Sbjct: 27194050 tactgtccttgttcgtggaataccaaaggaaaccaaagaatcatgcagtaatgctattga 27193991

                                                    
Query: 503      tgatttcttcaccaagtatcatgcatcaagttacct 538
                |||||||||||||||||| |||| |||||| |||||
Sbjct: 27193990 tgatttcttcaccaagtaccatggatcaagctacct 27193955



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                            
Query: 310      ggctttgggttcattctgtagtcctctacataatatctggagtagcttgctttctcctat 369
                |||||||||| |||| ||||| | | ||||||||||| |||||||||||| |||||||||
Sbjct: 27194276 ggctttgggtccattgtgtagccttgtacataatatcaggagtagcttgcattctcctat 27194217

                  
Query: 370      at 371
                ||
Sbjct: 27194216 at 27194215
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                            
Query: 42       atcttggagaggtttgttccgtccaccggctggatcgtcaaggccctgcagtgtaccgag 101
                ||||||||||| ||||| || || || |||||||| || || ||||||||||||||||||
Sbjct: 27120662 atcttggagagatttgtaccatctactggctggatagtaaaagccctgcagtgtaccgag 27120603

                                                            
Query: 102      gaagatctcttggcagctgctgggctggacgctgttgctttcaa 145
                |||||  ||||||| ||||||||||| || ||||||| ||||||
Sbjct: 27120602 gaagagatcttggctgctgctgggctagatgctgttgttttcaa 27120559



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 128/156 (82%)
 Strand = Plus / Minus

                                                                            
Query: 383      gcacattgctaggctgaggctccttcaccttaaacgcacaacactaaatccaggccaatt 442
                ||||||||||||||||||||||| ||| ||||   |  |||  |  |||||| |||| ||
Sbjct: 27119710 gcacattgctaggctgaggctccgtcatcttacttgtgcaatgcccaatccaagccattt 27119651

                                                                            
Query: 443      tactgtgcttgttcgcggaataccaaagacagcaaacgaatcgtgcagtagtgatgtcga 502
                |||||| |||||||| ||||||||||||  | | || ||||| ||||||| || | | ||
Sbjct: 27119650 tactgtccttgttcgtggaataccaaaggaaaccaaagaatcatgcagtaatgctattga 27119591

                                                    
Query: 503      tgatttcttcaccaagtatcatgcatcaagttacct 538
                |||||||||||||||||| |||| |||||| |||||
Sbjct: 27119590 tgatttcttcaccaagtaccatggatcaagctacct 27119555



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                            
Query: 310      ggctttgggttcattctgtagtcctctacataatatctggagtagcttgctttctcctat 369
                |||||||||| |||| ||||| | | ||||||||||| |||||||||||| |||||||||
Sbjct: 27119876 ggctttgggtccattgtgtagccttgtacataatatcaggagtagcttgcattctcctat 27119817

                  
Query: 370      at 371
                ||
Sbjct: 27119816 at 27119815
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>emb|AL731887.5|CNS08C8R Oryza sativa chromosome 12, . BAC OJ1559_C07 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 145816

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                          
Query: 42     atcttggagaggtttgttccgtccaccggctggatcgtcaaggccctgcagtgtaccgag 101
              ||||||||||| ||||| || || || |||||||| || || ||||||||||||||||||
Sbjct: 133961 atcttggagagatttgtaccatctactggctggatagtaaaagccctgcagtgtaccgag 133902

                                                          
Query: 102    gaagatctcttggcagctgctgggctggacgctgttgctttcaa 145
              |||||  ||||||| ||||||||||| || ||||||| ||||||
Sbjct: 133901 gaagagatcttggctgctgctgggctagatgctgttgttttcaa 133858



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 128/156 (82%)
 Strand = Plus / Minus

                                                                          
Query: 383    gcacattgctaggctgaggctccttcaccttaaacgcacaacactaaatccaggccaatt 442
              ||||||||||||||||||||||| ||| ||||   |  |||  |  |||||| |||| ||
Sbjct: 133009 gcacattgctaggctgaggctccgtcatcttacttgtgcaatgcccaatccaagccattt 132950

                                                                          
Query: 443    tactgtgcttgttcgcggaataccaaagacagcaaacgaatcgtgcagtagtgatgtcga 502
              |||||| |||||||| ||||||||||||  | | || ||||| ||||||| || | | ||
Sbjct: 132949 tactgtccttgttcgtggaataccaaaggaaaccaaagaatcatgcagtaatgctattga 132890

                                                  
Query: 503    tgatttcttcaccaagtatcatgcatcaagttacct 538
              |||||||||||||||||| |||| |||||| |||||
Sbjct: 132889 tgatttcttcaccaagtaccatggatcaagctacct 132854



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                          
Query: 310    ggctttgggttcattctgtagtcctctacataatatctggagtagcttgctttctcctat 369
              |||||||||| |||| ||||| | | ||||||||||| |||||||||||| |||||||||
Sbjct: 133175 ggctttgggtccattgtgtagccttgtacataatatcaggagtagcttgcattctcctat 133116

                
Query: 370    at 371
              ||
Sbjct: 133115 at 133114
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>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from
            chromosome 12 of cultivar Nipponbare of ssp. japonica of
            Oryza sativa (rice), complete sequence
          Length = 146585

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 90/104 (86%)
 Strand = Plus / Minus

                                                                        
Query: 42   atcttggagaggtttgttccgtccaccggctggatcgtcaaggccctgcagtgtaccgag 101
            ||||||||||| ||||| || || || |||||||| || || ||||||||||||||||||
Sbjct: 8094 atcttggagagatttgtaccatctactggctggatagtaaaagccctgcagtgtaccgag 8035

                                                        
Query: 102  gaagatctcttggcagctgctgggctggacgctgttgctttcaa 145
            |||||  ||||||| ||||||||||| || ||||||| ||||||
Sbjct: 8034 gaagagatcttggctgctgctgggctagatgctgttgttttcaa 7991



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 128/156 (82%)
 Strand = Plus / Minus

                                                                        
Query: 383  gcacattgctaggctgaggctccttcaccttaaacgcacaacactaaatccaggccaatt 442
            ||||||||||||||||||||||| ||| ||||   |  |||  |  |||||| |||| ||
Sbjct: 7142 gcacattgctaggctgaggctccgtcatcttacttgtgcaatgcccaatccaagccattt 7083

                                                                        
Query: 443  tactgtgcttgttcgcggaataccaaagacagcaaacgaatcgtgcagtagtgatgtcga 502
            |||||| |||||||| ||||||||||||  | | || ||||| ||||||| || | | ||
Sbjct: 7082 tactgtccttgttcgtggaataccaaaggaaaccaaagaatcatgcagtaatgctattga 7023

                                                
Query: 503  tgatttcttcaccaagtatcatgcatcaagttacct 538
            |||||||||||||||||| |||| |||||| |||||
Sbjct: 7022 tgatttcttcaccaagtaccatggatcaagctacct 6987



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                        
Query: 310  ggctttgggttcattctgtagtcctctacataatatctggagtagcttgctttctcctat 369
            |||||||||| |||| ||||| | | ||||||||||| |||||||||||| |||||||||
Sbjct: 7308 ggctttgggtccattgtgtagccttgtacataatatcaggagtagcttgcattctcctat 7249

              
Query: 370  at 371
            ||
Sbjct: 7248 at 7247
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>ref|XM_506914.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0035I24.8
            mRNA
          Length = 3641

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 436  gccaatttactgtgcttgttcgcggaataccaaa 469
            |||| ||||||||||||||||| ||| |||||||
Sbjct: 1617 gccattttactgtgcttgttcgtggagtaccaaa 1650



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 506  tttcttcaccaagtatcatgcatcaagttacct 538
            ||||||||||||||||||||  || ||||||||
Sbjct: 1687 tttcttcaccaagtatcatgtgtcgagttacct 1719
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>ref|XM_469245.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2582

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 436 gccaatttactgtgcttgttcgcggaataccaaa 469
           |||| ||||||||||||||||| ||| |||||||
Sbjct: 554 gccattttactgtgcttgttcgtggagtaccaaa 587



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                       
Query: 118 ctgctgggctggacgctgttgctttcaacaggatgcttgtgttcagcatacgcatctttt 177
           |||||||| |||| || ||||  ||||| ||||| ||||| || ||||||||||| || |
Sbjct: 236 ctgctgggttggatgcagttgtcttcaataggattcttgtatttagcatacgcatattct 295

                     
Query: 178 ccctagccgc 187
           || |||||||
Sbjct: 296 ccttagccgc 305



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 506 tttcttcaccaagtatcatgcatcaagttacct 538
           ||||||||||||||||||||  || ||||||||
Sbjct: 624 tttcttcaccaagtatcatgtgtcgagttacct 656



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 77/96 (80%)
 Strand = Plus / Plus

                                                                       
Query: 306 agatggctttgggttcattctgtagtcctctacataatatctggagtagcttgctttctc 365
           |||||||| ||||| |||| ||| |  || ||||| |||||||| || |||||| |||| 
Sbjct: 424 agatggctctgggtccattgtgttgcactgtacatcatatctggtgtggcttgccttctt 483

                                               
Query: 366 ctatatgtggagtatgggcacattgctaggctgagg 401
           |||||  | |||||   ||| |||||||||||||||
Sbjct: 484 ctataccttgagtacaagcatattgctaggctgagg 519
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 436      gccaatttactgtgcttgttcgcggaataccaaa 469
                |||| ||||||||||||||||| ||| |||||||
Sbjct: 26337069 gccattttactgtgcttgttcgtggagtaccaaa 26337036



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 506      tttcttcaccaagtatcatgcatcaagttacct 538
                ||||||||||||||||||||  || ||||||||
Sbjct: 26336999 tttcttcaccaagtatcatgtgtcgagttacct 26336967
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>gb|AC090683.7| Oryza sativa chromosome 3 BAC OSJNBa0035I24 genomic sequence, complete
             sequence
          Length = 134728

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 436   gccaatttactgtgcttgttcgcggaataccaaa 469
             |||| ||||||||||||||||| ||| |||||||
Sbjct: 53571 gccattttactgtgcttgttcgtggagtaccaaa 53604



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 506   tttcttcaccaagtatcatgcatcaagttacct 538
             ||||||||||||||||||||  || ||||||||
Sbjct: 53641 tttcttcaccaagtatcatgtgtcgagttacct 53673
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 436      gccaatttactgtgcttgttcgcggaataccaaa 469
                |||| ||||||||||||||||| ||| |||||||
Sbjct: 26428378 gccattttactgtgcttgttcgtggagtaccaaa 26428345



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 506      tttcttcaccaagtatcatgcatcaagttacct 538
                ||||||||||||||||||||  || ||||||||
Sbjct: 26428308 tttcttcaccaagtatcatgtgtcgagttacct 26428276
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>dbj|AK103691.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136H09, full
            insert sequence
          Length = 3637

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 436  gccaatttactgtgcttgttcgcggaataccaaa 469
            |||| ||||||||||||||||| ||| |||||||
Sbjct: 1613 gccattttactgtgcttgttcgtggagtaccaaa 1646



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 506  tttcttcaccaagtatcatgcatcaagttacct 538
            ||||||||||||||||||||  || ||||||||
Sbjct: 1683 tttcttcaccaagtatcatgtgtcgagttacct 1715
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>emb|AL954726.31| Zebrafish DNA sequence from clone CH211-274A9 in linkage group 23,
             complete sequence
          Length = 164507

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 306   agatggctttgggttcattct 326
             |||||||||||||||||||||
Sbjct: 44859 agatggctttgggttcattct 44879
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>gb|AC135417.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1314_A05,
             complete sequence
          Length = 109853

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    ccttcatcttggagaggttt 56
             ||||||||||||||||||||
Sbjct: 54718 ccttcatcttggagaggttt 54699
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>gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015F11,
             complete sequence
          Length = 177574

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    ccttcatcttggagaggttt 56
             ||||||||||||||||||||
Sbjct: 26804 ccttcatcttggagaggttt 26785
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>gb|AC125252.7| Mus musculus chromosome 5, clone RP23-388M10, complete sequence
          Length = 212724

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 504    gatttcttcaccaagtatca 523
              ||||||||||||||||||||
Sbjct: 118790 gatttcttcaccaagtatca 118809
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 236     gacgcaacaccttgagattc 255
               ||||||||||||||||||||
Sbjct: 3423000 gacgcaacaccttgagattc 3423019
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>gb|AC160469.5| Mus musculus chromosome 5, clone RP23-318I19, complete sequence
          Length = 221860

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 263    acaattgcatatgttcacagttca 286
              |||||||||||| |||||||||||
Sbjct: 212749 acaattgcatatattcacagttca 212772
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 67      ccggctggatcgtcaaggcc 86
               ||||||||||||||||||||
Sbjct: 1426637 ccggctggatcgtcaaggcc 1426656
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>emb|Z70306.1|CEC06G8 Caenorhabditis elegans Cosmid C06G8, complete sequence
          Length = 31143

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 499  tcgatgatttcttcaccaag 518
            ||||||||||||||||||||
Sbjct: 5228 tcgatgatttcttcaccaag 5247
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>emb|AL512271.10| Human DNA sequence from clone RP11-74K19 on chromosome 1 Contains a
             novel gene, complete sequence
          Length = 132920

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    ccttcatcttggagaggttt 56
             ||||||||||||||||||||
Sbjct: 79429 ccttcatcttggagaggttt 79410
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>gb|AC129926.4| Homo sapiens chromosome 17, clone RP11-663N22, complete sequence
          Length = 208551

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 265    aattgcatatgttcacagttcagaatgt 292
              ||||||||||||||||| |||| |||||
Sbjct: 175577 aattgcatatgttcacatttcaaaatgt 175604
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>ref|XM_786692.1| PREDICTED: Strongylocentrotus purpuratus similar to Tripartite
           motif protein 10 (RING finger protein 9) (B30-RING
           finger protein) (LOC586935), partial mRNA
          Length = 885

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 283 ttcagaatgtggaagtgcaa 302
           ||||||||||||||||||||
Sbjct: 572 ttcagaatgtggaagtgcaa 591
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>emb|AL603925.20| Mouse DNA sequence from clone RP23-175K24 on chromosome 11 Contains the
             gene for nuclear DNA binding protein C1d and a aldo-keto
             reductase family 1 member B3 (aldose reductase) (Akr1b3)
             pseudogene, complete sequence
          Length = 232869

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   ttgctttcaacaggatgctt 155
             ||||||||||||||||||||
Sbjct: 19788 ttgctttcaacaggatgctt 19807
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>gb|AC069061.11| Homo sapiens chromosome 17, clone RP11-260A9, complete sequence
          Length = 178558

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 265    aattgcatatgttcacagttcagaatgt 292
              ||||||||||||||||| |||| |||||
Sbjct: 133023 aattgcatatgttcacatttcaaaatgt 132996
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>gb|AC087297.13| Homo sapiens chromosome 17, clone RP11-362P24, complete sequence
          Length = 179026

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 265    aattgcatatgttcacagttcagaatgt 292
              ||||||||||||||||| |||| |||||
Sbjct: 160694 aattgcatatgttcacatttcaaaatgt 160721
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>ref|NM_069597.2| Caenorhabditis elegans T25B9.9 (T25B9.9) mRNA, complete cds
          Length = 1656

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 499  tcgatgatttcttcaccaag 518
            ||||||||||||||||||||
Sbjct: 1185 tcgatgatttcttcaccaag 1204
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 37       ccttcatcttggagaggttt 56
                ||||||||||||||||||||
Sbjct: 15941053 ccttcatcttggagaggttt 15941034
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>gb|AC092646.2| Homo sapiens BAC clone RP11-415D20 from 2, complete sequence
          Length = 176982

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 286    agaatgtggaagtgcaatct 305
              ||||||||||||||||||||
Sbjct: 129949 agaatgtggaagtgcaatct 129930
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>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence
          Length = 3288558

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 498     gtcgatgatttcttcaccaa 517
               ||||||||||||||||||||
Sbjct: 3101697 gtcgatgatttcttcaccaa 3101678
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>emb|AL929113.9| Mouse DNA sequence from clone RP23-424D23 on chromosome 2, complete
             sequence
          Length = 161187

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 315   tgggttcattctgtagtcctctac 338
             |||||||||||||||||| |||||
Sbjct: 13007 tgggttcattctgtagtcatctac 13030
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>gb|AC108848.12| Mus musculus chromosome 5, clone RP23-300K5, complete sequence
          Length = 231380

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 263    acaattgcatatgttcacagttca 286
              |||||||||||| |||||||||||
Sbjct: 101333 acaattgcatatattcacagttca 101310
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>emb|AL732469.8| Mouse DNA sequence from clone RP23-434B15 on chromosome X, complete
             sequence
          Length = 197111

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 100   aggaagatctcttggcagct 119
             ||||||||||||||||||||
Sbjct: 25681 aggaagatctcttggcagct 25662
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>dbj|AP001094.6| Homo sapiens genomic DNA, chromosome 18 clone:RP11-789C17, complete
             sequences
          Length = 181310

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 265   aattgcatatgttcacagttcagaatgt 292
             ||||||||||||||||| |||| |||||
Sbjct: 35451 aattgcatatgttcacatttcaaaatgt 35478


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,074,284
Number of Sequences: 3902068
Number of extensions: 4074284
Number of successful extensions: 69081
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68873
Number of HSP's gapped (non-prelim): 208
length of query: 539
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 516
effective length of database: 17,143,297,704
effective search space: 8845941615264
effective search space used: 8845941615264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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