>YEZ3_YEAST (P32656) Hypothetical 26.3 kDa protein in RAD4-CHD1 intergenic|
           region
          Length = 232

 Score = 80.9 bits (198), Expect = 3e-15
 Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 50/221 (22%)
 Frame = +2

Query: 104 SLVWNPGFAYDARLVGFVRDYRRVFYQGSTDHRGTPEFPGRTVTL--------------- 238
           SL++ P   Y  R+   +  + R F+Q STDHRGTP  PGR  TL               
Sbjct: 15  SLIYKPPSHYTHRIPAIIHGFARRFWQSSTDHRGTPANPGRVATLIPYEDIIRQTAFLKN 74

Query: 239 ----------EHQPGSTCWGVAYKISREQDKQTALEYLEVREKQ----YDEKVYLDLYTD 376
                     +        GV Y I  E   Q   EYL VRE+     ++ +V+L+   +
Sbjct: 75  VNLYSESAPIQDPDDLVTIGVVYYIPPEH-AQEVREYLNVREQNGYTLHEVEVHLETNRE 133

Query: 377 SSPKIPEVQNMM--------------VYLATTNKEANQNYLGPAPLEEMAKQIYLAEGPT 514
              ++ E    +              VY+ T + EA   ++GP  ++E AK I ++ GP+
Sbjct: 134 HEAELGEALEQLPRHNKSGKRVLLTSVYIGTIDNEA---FVGPETVDETAKVIAVSHGPS 190

Query: 515 GPNKEYLFKLEDALNKIGVV-------DQHVQDLATAVRKY 616
           G N EYL KLE AL ++ ++       D ++  L   V KY
Sbjct: 191 GSNYEYLAKLEQALAQMPIMKERGRITDHYLTALLETVNKY 231

>CHAC_ECOLI (P39163) Cation transport protein chaC|
          Length = 231

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 49/170 (28%), Positives = 75/170 (44%)
 Frame = +2

Query: 104 SLVWNPGFAYDARLVGFVRDYRRVFYQGSTDHRGTPEFPGRTVTLEHQPGSTCWGVAYKI 283
           SL+WNP   +     G +  + R F    T  RGT   PGR + L+   G    GVAY++
Sbjct: 54  SLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKE--GGRTTGVAYRL 111

Query: 284 SREQDKQTALEYLEVREKQYDEKVYLDLYTDSSPKIPEVQNMMVYLATTNKEANQNYLGP 463
             E  +Q   E   + +++     YL  +           N +V++       +  Y   
Sbjct: 112 PEETLEQ---ELTLLWKREMITGCYLPTWCQLDLDDGRTVNAIVFIMDPR---HPEYESD 165

Query: 464 APLEEMAKQIYLAEGPTGPNKEYLFKLEDALNKIGVVDQHVQDLATAVRK 613
              + +A  I  A GP G N +YLF LE  L K+G+ D  + DL  +V+K
Sbjct: 166 TRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKK 215

>ADCY1_BOVIN (P19754) Adenylate cyclase type 1 (EC 4.6.1.1) (Adenylate cyclase|
           type I) (ATP pyrophosphate-lyase 1)
           (Ca(2+)/calmodulin-activated adenylyl cyclase)
          Length = 1134

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 25/78 (32%), Positives = 41/78 (52%)
 Frame = -1

Query: 418 IYHHILDFRYFGGRICIQVKVNLLIILLLSYFQILQGCLLILLP*NFVSNSPACGPGLVL 239
           +Y HI   + F G + IQ++  L I +++  + + QGC++  LP ++ S+SP  G  +VL
Sbjct: 655 LYLHITRVQCFPGCLTIQIRTVLCIFIVVLIYSVAQGCVVGCLPWSW-SSSPN-GSLVVL 712

Query: 238 ERDGPPGELRRAPVVRAP 185
              G    L   P   AP
Sbjct: 713 SSGGRDPVLPVPPCESAP 730

>ADCY1_HUMAN (Q08828) Adenylate cyclase type 1 (EC 4.6.1.1) (Adenylate cyclase|
           type I) (ATP pyrophosphate-lyase 1)
           (Ca(2+)/calmodulin-activated adenylyl cyclase)
          Length = 1119

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
 Frame = -1

Query: 505 FG*VDLLGHFFQRSRTQIVLVGLLIC---GG*IYHHILDFRYFGGRICIQVKVNLLIILL 335
           FG V LL   F +S   ++L+   IC      +Y HI   + F G + IQ++  L I ++
Sbjct: 623 FGLVYLL--IFPQSVVVLLLLVFCICFLVACVLYLHITRVQCFPGCLTIQIRTVLCIFIV 680

Query: 334 LSYFQILQGCLLILLP 287
           +  + + QGC++  LP
Sbjct: 681 VLIYSVAQGCVVGCLP 696

>ADCY1_MOUSE (O88444) Adenylate cyclase type 1 (EC 4.6.1.1) (Adenylate cyclase|
           type I) (ATP pyrophosphate-lyase 1)
           (Ca(2+)/calmodulin-activated adenylyl cyclase)
          Length = 1118

 Score = 33.1 bits (74), Expect = 0.72
 Identities = 15/51 (29%), Positives = 29/51 (56%)
 Frame = -1

Query: 418 IYHHILDFRYFGGRICIQVKVNLLIILLLSYFQILQGCLLILLP*NFVSNS 266
           +Y HI   + F G + IQ++  L + +++  + + QGC++  LP  + S S
Sbjct: 652 LYLHITRVQCFPGCLTIQIRTALCVFIVVLIYSVAQGCVVGCLPWAWSSQS 702

>OTC_OCEIH (Q8ET05) Ornithine carbamoyltransferase (EC 2.1.3.3) (OTCase)|
          Length = 322

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 22/68 (32%), Positives = 33/68 (48%)
 Frame = +2

Query: 410 MVYLATTNKEANQNYLGPAPLEEMAKQIYLAEGPTGPNKEYLFKLEDALNKIGVVDQHVQ 589
           +VY+   N   +   LG A    M       +G T PNKE L K +   N+ G + +   
Sbjct: 168 LVYIGDGNNMTHSLMLGAAKTG-MHMVAVTPDGYT-PNKEVLTKAKSIANQHGAIIEWTS 225

Query: 590 DLATAVRK 613
           D+ATAV++
Sbjct: 226 DIATAVQE 233

>MYOD1_COTJA (P21572) Myoblast determination protein 1 homolog (Myogenic factor|
           1)
          Length = 297

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 205 HAGVPREDRHARAPARVHMLGSCL 276
           H G P E+ H RAP+  H  G CL
Sbjct: 63  HHGHPHEEEHVRAPSGHHQAGRCL 86

>INVA_VICFA (Q43857) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid|
           sucrose hydrolase) (Acid invertase) (AI) (Vacuolar
           invertase)
          Length = 642

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
 Frame = +2

Query: 239 EHQPGSTCWGV---AYKISREQDKQTALEYLEVREKQYDEKVYLDLYTDSSPKIPEVQNM 409
           ++ P    WG     + +SR+      L    V ++ YD      ++T S+  +P+ Q +
Sbjct: 138 QYNPNGAVWGDIVWGHAVSRDLIHWLHLPLAMVADQWYDSN---GVWTGSATILPDGQVI 194

Query: 410 MVYLATTNKEAN-QNYLGPAPLEE 478
           M+Y  +TN+    QN   PA L +
Sbjct: 195 MLYTGSTNEFVQVQNLAYPADLND 218

>CG024_HUMAN (O75223) Protein C7orf24|
          Length = 188

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 35/164 (21%), Positives = 61/164 (37%), Gaps = 4/164 (2%)
 Frame = +2

Query: 116 NPGFAYD--ARLVGFVRDYRRVFYQGSTDHRGTPEFPGRTVTLEHQPGSTCWGVAYKISR 289
           NP  A+   ARL  F  D+      G++  + +  + G   T+   PG   WGV +K+++
Sbjct: 35  NPSAAFFCVARLQDFKLDF------GNSQGKTSQTWHGGIATIFQSPGDEVWGVVWKMNK 88

Query: 290 EQDKQTALEYLEVREKQYDEKVYLDLYTDSSPKIPEVQNMMVYLATTNKEANQNYLGPAP 469
                       +      E V   +Y     K+   +   +   T       NY    P
Sbjct: 89  S----------NLNSLDEQEGVKSGMYVVIEVKVATQEGKEI---TCRSYLMTNYESAPP 135

Query: 470 LEEMAKQIYLAEGPTGPNKEYLFKLE--DALNKIGVVDQHVQDL 595
             +  K I +     G   EY  KL+  +  +  G V + ++D+
Sbjct: 136 SPQYKKIICMGAKENGLPLEYQEKLKAIEPNDYTGKVSEEIEDI 179

>KR171_HUMAN (Q9BYP8) Keratin-associated protein 17-1 (Keratin associated|
           protein 16.1)
          Length = 105

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +1

Query: 547 GCVKQNRCCGSTCSGFGNCCAQVC 618
           GC   + CCGS+C G G CC  VC
Sbjct: 74  GCCGSS-CCGSSCCGSG-CCGPVC 95

>YOL8_CAEEL (Q02335) Hypothetical protein ZK370.8 in chromosome III|
          Length = 569

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
 Frame = +2

Query: 281 ISREQDKQTALEYLEVREKQYDEKVYLDLYTDSSPKI-PEVQNMMVYLATTNKEANQNYL 457
           + R+ ++  AL  L+ +EKQYD    L+ +T    K  P   + +V +   N+ A +  +
Sbjct: 40  LERDLEEIKALGNLKFKEKQYDSA--LEAFTKGVEKAGPNSSDQIVAMLYQNRAACREKV 97

Query: 458 GPAPLEEMAKQIYLAEGPTGPNKEYLFKLEDALNKIG 568
           G +P + +   +   +      K YL +   ALN +G
Sbjct: 98  GHSPFDILNDCMAALKVDKKYTKAYL-RAAKALNDVG 133

>PP11_HUMAN (P21128) Placental protein 11 precursor (EC 3.4.21.-) (PP11)|
          Length = 369

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
 Frame = +1

Query: 556 KQNRC-CGSTCSGFGNCC---AQVCRDHLIISS 642
           K ++C C + C  FGNCC     +C DH +  S
Sbjct: 59  KHHQCHCNARCQEFGNCCKDFESLCSDHEVSHS 91


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,592,590
Number of Sequences: 219361
Number of extensions: 2094481
Number of successful extensions: 6891
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6869
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)