ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd22e21 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK102588.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098F09, full insert sequence Length = 2276 Score = 216 bits (109), Expect = 6e-53 Identities = 216/251 (86%), Gaps = 3/251 (1%) Strand = Plus / Plus Query: 118 ccatggctcgccggtcctcgtcctcctcctcgtcg---ggggcgtggcgctacctcaacc 174 |||||||||| |||||||| |||||||| |||||| ||||||||||| |||||||||| Sbjct: 152 ccatggctcgtcggtcctcctcctcctcgtcgtcgtcgggggcgtggcggtacctcaacc 211 Query: 175 ccgcctactacctcaagcggcccaagcgcctcgcgctcctcttcttcgtcttcgtcgccg 234 | || || |||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 212 cggcgtattacctcaagcggccgaagcgcctcgccctcctcttcttcgtcttcgtcgccg 271 Query: 235 ccaccttcgccttctgggaccgccaatcgctcgtcagcgagtacgagtctgagatttccc 294 ||||||||||||||||||| || || ||||||||| ||||||||||||| || ||||| | Sbjct: 272 ccaccttcgccttctgggatcgacagtcgctcgtccgcgagtacgagtcagaaatttctc 331 Query: 295 aattaaaaaatgaaataaaccagttgcatggtcagttaaggaaggctggtattcaactgg 354 ||| | || || |||| ||||||| || |||||||| |||||||| |||| |||| Sbjct: 332 gattggatgataaagtaaatcagttgcgtgaccagttaagaaaggctggagttcatctgg 391 Query: 355 aagaaaatcca 365 | ||||||||| Sbjct: 392 atgaaaatcca 402 Score = 99.6 bits (50), Expect = 1e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 439 aggcatttgagaaaaactcccgcatagcatctggatacgtgggactaagggatgtgaata 498 |||||||||| || ||||||||||||| |||||| ||||| || || || |||||||||| Sbjct: 1583 aggcatttgaaaagaactcccgcatagaatctggttacgttgggctgagagatgtgaata 1642 Query: 499 gtggtgaaaaggacgacaagatgcagagcttcttcctagcagagacgctcaagtacct 556 ||| || ||||| ||| ||| || |||||||||||||||||||| ||||||||||| Sbjct: 1643 ctggcgagaaggataacatgatacaaagcttcttcctagcagagactctcaagtacct 1700 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 390 cttgtagagattgatcctattaataatgaaaggagggaaaaggtcaaggaggc 442 |||||||| |||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 430 cttgtagaaattgatcctattaataatgaaaggagagaaaaggttaaggaggc 482
>ref|XM_473805.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1719 Score = 212 bits (107), Expect = 9e-52 Identities = 214/249 (85%), Gaps = 3/249 (1%) Strand = Plus / Plus Query: 120 atggctcgccggtcctcgtcctcctcctcgtcg---ggggcgtggcgctacctcaacccc 176 |||||||| |||||||| |||||||| |||||| ||||||||||| ||||||||||| Sbjct: 1 atggctcgtcggtcctcctcctcctcgtcgtcgtcgggggcgtggcggtacctcaacccg 60 Query: 177 gcctactacctcaagcggcccaagcgcctcgcgctcctcttcttcgtcttcgtcgccgcc 236 || || |||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 61 gcgtattacctcaagcggccgaagcgcctcgccctcctcttcttcgtcttcgtcgccgcc 120 Query: 237 accttcgccttctgggaccgccaatcgctcgtcagcgagtacgagtctgagatttcccaa 296 ||||||||||||||||| || || ||||||||| ||||||||||||| || ||||| | | Sbjct: 121 accttcgccttctgggatcgacagtcgctcgtccgcgagtacgagtcagaaatttctcga 180 Query: 297 ttaaaaaatgaaataaaccagttgcatggtcagttaaggaaggctggtattcaactggaa 356 || | || || |||| ||||||| || |||||||| |||||||| |||| ||||| Sbjct: 181 ttggatgataaagtaaatcagttgcgtgaccagttaagaaaggctggagttcatctggat 240 Query: 357 gaaaatcca 365 ||||||||| Sbjct: 241 gaaaatcca 249 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Plus Query: 439 aggcatttgagaaaaactcccgcatagcatctggatacgtgggactaagggatgtgaata 498 |||||||||| || ||||||||||||| |||||| ||||| || || || |||||||||| Sbjct: 1430 aggcatttgaaaagaactcccgcatagaatctggttacgttgggctgagagatgtgaata 1489 Query: 499 gtggtgaaaaggacgacaagatgcagagcttcttcctagcagagacgctcaagtacct 556 ||| || ||||| ||| |||||| |||||||||||||||||||| ||||||||||| Sbjct: 1490 ctggcgagaaggataacatgatgcaaagcttcttcctagcagagactctcaagtacct 1547 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 390 cttgtagagattgatcctattaataatgaaaggagggaaaaggtcaaggaggc 442 |||||||| |||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 277 cttgtagaaattgatcctattaataatgaaaggagagaaaaggttaaggaggc 329
>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09, complete sequence Length = 152732 Score = 200 bits (101), Expect = 4e-48 Identities = 151/167 (90%), Gaps = 3/167 (1%) Strand = Plus / Minus Query: 118 ccatggctcgccggtcctcgtcctcctcctcgtcg---ggggcgtggcgctacctcaacc 174 |||||||||| |||||||| |||||||| |||||| ||||||||||| |||||||||| Sbjct: 65938 ccatggctcgtcggtcctcctcctcctcgtcgtcgtcgggggcgtggcggtacctcaacc 65879 Query: 175 ccgcctactacctcaagcggcccaagcgcctcgcgctcctcttcttcgtcttcgtcgccg 234 | || || |||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 65878 cggcgtattacctcaagcggccgaagcgcctcgccctcctcttcttcgtcttcgtcgccg 65819 Query: 235 ccaccttcgccttctgggaccgccaatcgctcgtcagcgagtacgag 281 ||||||||||||||||||| || || ||||||||| ||||||||||| Sbjct: 65818 ccaccttcgccttctgggatcgacagtcgctcgtccgcgagtacgag 65772 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 390 cttgtagagattgatcctattaataatgaaaggagggaaaaggtcaaggaggc 442 |||||||| |||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 63887 cttgtagaaattgatcctattaataatgaaaggagagaaaaggttaaggaggc 63835 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 492 gtgaatagtggtgaaaaggacgacaagatgcagagcttcttcctagcagagacgctcaag 551 ||||||| ||| || ||||| ||| |||||| |||||||||||||||||||| |||||| Sbjct: 59542 gtgaatactggcgagaaggataacatgatgcaaagcttcttcctagcagagactctcaag 59483 Query: 552 tacct 556 ||||| Sbjct: 59482 tacct 59478 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Minus Query: 439 aggcatttgagaaaaactcccgcatagcatctggatacgt 478 |||||||||| || ||||||||||||| |||||| ||||| Sbjct: 59699 aggcatttgaaaagaactcccgcatagaatctggttacgt 59660
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 200 bits (101), Expect = 4e-48 Identities = 151/167 (90%), Gaps = 3/167 (1%) Strand = Plus / Minus Query: 118 ccatggctcgccggtcctcgtcctcctcctcgtcg---ggggcgtggcgctacctcaacc 174 |||||||||| |||||||| |||||||| |||||| ||||||||||| |||||||||| Sbjct: 30662207 ccatggctcgtcggtcctcctcctcctcgtcgtcgtcgggggcgtggcggtacctcaacc 30662148 Query: 175 ccgcctactacctcaagcggcccaagcgcctcgcgctcctcttcttcgtcttcgtcgccg 234 | || || |||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 30662147 cggcgtattacctcaagcggccgaagcgcctcgccctcctcttcttcgtcttcgtcgccg 30662088 Query: 235 ccaccttcgccttctgggaccgccaatcgctcgtcagcgagtacgag 281 ||||||||||||||||||| || || ||||||||| ||||||||||| Sbjct: 30662087 ccaccttcgccttctgggatcgacagtcgctcgtccgcgagtacgag 30662041 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 390 cttgtagagattgatcctattaataatgaaaggagggaaaaggtcaaggaggc 442 |||||||| |||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 30660156 cttgtagaaattgatcctattaataatgaaaggagagaaaaggttaaggaggc 30660104 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 492 gtgaatagtggtgaaaaggacgacaagatgcagagcttcttcctagcagagacgctcaag 551 ||||||| ||| || ||||| ||| |||||| |||||||||||||||||||| |||||| Sbjct: 30655811 gtgaatactggcgagaaggataacatgatgcaaagcttcttcctagcagagactctcaag 30655752 Query: 552 tacct 556 ||||| Sbjct: 30655751 tacct 30655747 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Minus Query: 439 aggcatttgagaaaaactcccgcatagcatctggatacgt 478 |||||||||| || ||||||||||||| |||||| ||||| Sbjct: 30655968 aggcatttgaaaagaactcccgcatagaatctggttacgt 30655929 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 cgcacgcacgcacacgcgcgcg 34 |||||||||||||||||||||| Sbjct: 32171372 cgcacgcacgcacacgcgcgcg 32171393 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 cgcacgcacgcacacgcgcg 32 |||||||||||||||||||| Sbjct: 30974990 cgcacgcacgcacacgcgcg 30975009
>gb|AY107358.1| Zea mays PCO097235 mRNA sequence Length = 810 Score = 131 bits (66), Expect = 3e-27 Identities = 105/118 (88%) Strand = Plus / Plus Query: 439 aggcatttgagaaaaactcccgcatagcatctggatacgtgggactaagggatgtgaata 498 ||||||||||||| ||||||||||||| ||||||||| |||||||| || |||||||| | Sbjct: 224 aggcatttgagaagaactcccgcatagaatctggatatgtgggactgagagatgtgaaca 283 Query: 499 gtggtgaaaaggacgacaagatgcagagcttcttcctagcagagacgctcaagtacct 556 ||||||||| ||| ||| ||||||||| |||||||| ||||||||||| |||||||| Sbjct: 284 ctggtgaaaaagacaacatgatgcagagtttcttcctggcagagacgctgaagtacct 341
>dbj|AK060852.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E10, full insert sequence Length = 1797 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Plus Query: 439 aggcatttgagaaaaactcccgcatagcatctggatacgtgggactaagggatgtgaata 498 |||||||||| || ||||||||||||| |||||| ||||| || || || |||||||||| Sbjct: 1107 aggcatttgaaaagaactcccgcatagaatctggttacgttgggctgagagatgtgaata 1166 Query: 499 gtggtgaaaaggacgacaagatgcagagcttcttcctagcagagacgctcaagtacct 556 ||| || ||||| ||| |||||| |||||||||||||||||||| ||||||||||| Sbjct: 1167 ctggcgagaaggataacatgatgcaaagcttcttcctagcagagactctcaagtacct 1224
>gb|AC126781.22| Medicago truncatula clone mth2-12m15, complete sequence Length = 116119 Score = 69.9 bits (35), Expect = 9e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 492 gtgaatagtggtgaaaaggacgacaagatgcagagcttcttcctagcagagacgctcaag 551 ||||||| ||||| || || |||| |||||||||||||||||| ||||| || |||||| Sbjct: 31350 gtgaatacaggtgacaaagatgacatgatgcagagcttcttccttgcagaaaccctcaag 31409 Query: 552 tacctctatct 562 ||||||||||| Sbjct: 31410 tacctctatct 31420
>dbj|AP006140.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT37A01, TM0244, complete sequence Length = 102724 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 518 gatgcagagcttcttcctagcagagacgctcaagtacctctatct 562 |||||||||||||||||| ||||| || ||||||||||||||||| Sbjct: 30467 gatgcagagcttcttcctcgcagaaacactcaagtacctctatct 30511
>ref|XM_310525.2| Anopheles gambiae str. PEST ENSANGP00000017297 (ENSANGG00000014808), partial mRNA Length = 2013 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 521 gcagagcttcttcctagcagagacgctcaagtacctctatctg 563 ||||||||||||||| || || ||||||||||||||||||||| Sbjct: 1869 gcagagcttcttcctcgccgaaacgctcaagtacctctatctg 1911
>ref|XM_580629.2| PREDICTED: Bos taurus similar to Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase (ER alpha-1,2-mannosidase) (Mannosidase alpha class 1B member 1) (Man9GlcNAc2-specific processing alpha-mannosidase) (LOC504493), mRNA Length = 2643 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagtacctctatctg 563 ||||||||| |||||||||| || | |||||||||||| ||||| |||||| Sbjct: 1762 gacaagatggagagcttctttctgggagagacgctcaaatacctgtatctg 1812
>ref|XM_871057.1| PREDICTED: Bos taurus similar to Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase (ER alpha-1,2-mannosidase) (Mannosidase alpha class 1B member 1) (Man9GlcNAc2-specific processing alpha-mannosidase) (LOC618734), mRNA Length = 2599 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagtacctctatctg 563 ||||||||| |||||||||| || | |||||||||||| ||||| |||||| Sbjct: 1963 gacaagatggagagcttctttctgggagagacgctcaaatacctgtatctg 2013
>ref|NM_104037.3| Arabidopsis thaliana calcium ion binding / mannosyl-oligosaccharide 1,2-alpha-mannosidase AT1G51590 transcript variant AT1G51590.1 mRNA, complete cds Length = 1994 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 441 gcatttgagaaaaactcccgcatagcatctggatacgtgggactaagggatgtgaatagt 500 ||||||||||| ||||| ||| ||| ||||||||| || || | | |||||| |||| Sbjct: 1587 gcatttgagaagaactctcgcgtagaatctggatatgtaggcttgaaggatgtcaataca 1646 Query: 501 ggtgaaaaggacgacaagatgcagagcttcttcctagcagagacgctcaagtacctctat 560 |||| || ||| |||||||||| ||||||||| |||| ||||| || ||||| || ||| Sbjct: 1647 ggtgctaaagacaacaagatgcaaagcttcttcttagctgagactcttaagtatctatat 1706 Query: 561 ct 562 || Sbjct: 1707 ct 1708
>ref|NM_001036094.1| Arabidopsis thaliana calcium ion binding / mannosyl-oligosaccharide 1,2-alpha-mannosidase AT1G51590 transcript variant AT1G51590.2 mRNA, complete cds Length = 2036 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 441 gcatttgagaaaaactcccgcatagcatctggatacgtgggactaagggatgtgaatagt 500 ||||||||||| ||||| ||| ||| ||||||||| || || | | |||||| |||| Sbjct: 1596 gcatttgagaagaactctcgcgtagaatctggatatgtaggcttgaaggatgtcaataca 1655 Query: 501 ggtgaaaaggacgacaagatgcagagcttcttcctagcagagacgctcaagtacctctat 560 |||| || ||| |||||||||| ||||||||| |||| ||||| || ||||| || ||| Sbjct: 1656 ggtgctaaagacaacaagatgcaaagcttcttcttagctgagactcttaagtatctatat 1715 Query: 561 ct 562 || Sbjct: 1716 ct 1717
>gb|AY128845.1| Arabidopsis thaliana mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative (At1g51590) mRNA, complete cds Length = 1801 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 441 gcatttgagaaaaactcccgcatagcatctggatacgtgggactaagggatgtgaatagt 500 ||||||||||| ||||| ||| ||| ||||||||| || || | | |||||| |||| Sbjct: 1414 gcatttgagaagaactctcgcgtagaatctggatatgtaggcttgaaggatgtcaataca 1473 Query: 501 ggtgaaaaggacgacaagatgcagagcttcttcctagcagagacgctcaagtacctctat 560 |||| || ||| |||||||||| ||||||||| |||| ||||| || ||||| || ||| Sbjct: 1474 ggtgctaaagacaacaagatgcaaagcttcttcttagctgagactcttaagtatctatat 1533 Query: 561 ct 562 || Sbjct: 1534 ct 1535
>gb|AY081353.1| Arabidopsis thaliana mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative (At1g51590) mRNA, complete cds Length = 1993 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 441 gcatttgagaaaaactcccgcatagcatctggatacgtgggactaagggatgtgaatagt 500 ||||||||||| ||||| ||| ||| ||||||||| || || | | |||||| |||| Sbjct: 1587 gcatttgagaagaactctcgcgtagaatctggatatgtaggcttgaaggatgtcaataca 1646 Query: 501 ggtgaaaaggacgacaagatgcagagcttcttcctagcagagacgctcaagtacctctat 560 |||| || ||| |||||||||| ||||||||| |||| ||||| || ||||| || ||| Sbjct: 1647 ggtgctaaagacaacaagatgcaaagcttcttcttagctgagactcttaagtatctatat 1706 Query: 561 ct 562 || Sbjct: 1707 ct 1708
>emb|BX814822.1|CNS0ADKY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB9ZE06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1917 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 441 gcatttgagaaaaactcccgcatagcatctggatacgtgggactaagggatgtgaatagt 500 ||||||||||| ||||| ||| ||| ||||||||| || || | | |||||| |||| Sbjct: 1582 gcatttgagaagaactctcgcgtagaatctggatatgtaggcttgaaggatgtcaataca 1641 Query: 501 ggtgaaaaggacgacaagatgcagagcttcttcctagcagagacgctcaagtacctctat 560 |||| || ||| |||||||||| ||||||||| |||| ||||| || ||||| || ||| Sbjct: 1642 ggtgctaaagacaacaagatgcaaagcttcttcttagctgagactcttaagtatctatat 1701 Query: 561 ct 562 || Sbjct: 1702 ct 1703
>ref|NM_207237.1| Mus musculus mannosidase, alpha, class 1C, member 1 (Man1c1), mRNA Length = 4309 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 522 cagagcttcttcctagcagagacgctcaagtacctctatct 562 |||||||||||||| || |||||||| || ||||||||||| Sbjct: 2114 cagagcttcttcctggctgagacgctgaaatacctctatct 2154
>gb|BC067023.1| Mus musculus mannosidase, alpha, class 1C, member 1, mRNA (cDNA clone MGC:91324 IMAGE:6848230), complete cds Length = 4309 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 522 cagagcttcttcctagcagagacgctcaagtacctctatct 562 |||||||||||||| || |||||||| || ||||||||||| Sbjct: 2114 cagagcttcttcctggctgagacgctgaaatacctctatct 2154
>ref|XM_976379.1| PREDICTED: Mus musculus mannosidase, alpha, class 1C, member 1 (Man1c1), mRNA Length = 2879 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 522 cagagcttcttcctagcagagacgctcaagtacctctatct 562 |||||||||||||| || |||||||| || ||||||||||| Sbjct: 1591 cagagcttcttcctggctgagacgctgaaatacctctatct 1631
>gb|BC030443.1| Mus musculus mannosidase, alpha, class 1C, member 1, mRNA (cDNA clone IMAGE:5373083), partial cds Length = 1575 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 522 cagagcttcttcctagcagagacgctcaagtacctctatct 562 |||||||||||||| || |||||||| || ||||||||||| Sbjct: 707 cagagcttcttcctggctgagacgctgaaatacctctatct 747
>gb|AY358465.1| Homo sapiens clone DNA56529 MAN1B1 (UNQ747) mRNA, complete cds Length = 2720 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 1982 gacaagatggagagcttcttcctgggggagacgctcaagta 2022
>emb|AL929554.20| Human DNA sequence from clone RP11-350O14 on chromosome 9 Contains the 3' end of the MAN1B1 gene for mannosidase alpha class 1B member 1, the DPP7 gene for dipeptidylpeptidase 7, the GRIN1 gene for glutamate receptor ionotropic N-methyl D-aspartate 1, a novel gene, the gene for anaphase-promoting complex subunit 2 (ANAPC2), the SSNA1 gene for Sjogren's syndrome nuclear autoantigen 1, three novel genes (FLJ90254), a novel pseudogene, the 5' end of the gene for NADPH-dependent FMN and FAD containing oxidoreductase (NR1) and thirteen CpG islands, complete sequence Length = 119883 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 21714 gacaagatggagagcttcttcctgggggagacgctcaagta 21754
>emb|AL110221.1|HSM800876 Homo sapiens mRNA; cDNA DKFZp434I213 (from clone DKFZp434I213) Length = 2337 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 1480 gacaagatggagagcttcttcctgggggagacgctcaagta 1520
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 134 ctcgtcctcctcctcgtcgggggcgtggc 162 |||||||||||| |||||||||||||||| Sbjct: 1183364 ctcgtcctcctcgtcgtcgggggcgtggc 1183392
>emb|CR749534.1| Homo sapiens mRNA; cDNA DKFZp686C04126 (from clone DKFZp686C04126) Length = 7265 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 6516 gacaagatggagagcttcttcctgggggagacgctcaagta 6556
>dbj|AK128341.1| Homo sapiens cDNA FLJ46483 fis, clone THYMU3026306, highly similar to Homo sapiens alpha 1,2-mannosidase (LOC51697) Length = 4524 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 3880 gacaagatggagagcttcttcctgggggagacgctcaagta 3920
>dbj|AK128257.1| Homo sapiens cDNA FLJ46392 fis, clone THYMU3002825, highly similar to Homo sapiens alpha 1,2-mannosidase (LOC51697) Length = 3940 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 3210 gacaagatggagagcttcttcctgggggagacgctcaagta 3250
>dbj|AK128033.1| Homo sapiens cDNA FLJ46152 fis, clone TESTI4001027, highly similar to Homo sapiens mannosidase, alpha, class 1B, member 1 (MAN1B1) Length = 5048 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 4318 gacaagatggagagcttcttcctgggggagacgctcaagta 4358
>dbj|AK127005.1| Homo sapiens cDNA FLJ45060 fis, clone BRAWH3023415, highly similar to Homo sapiens alpha 1,2-mannosidase (LOC51697) Length = 3862 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 3132 gacaagatggagagcttcttcctgggggagacgctcaagta 3172
>dbj|AK126926.1| Homo sapiens cDNA FLJ44979 fis, clone BRAWH3003411, highly similar to Homo sapiens mannosidase, alpha, class 1B, member 1 (MAN1B1) Length = 4797 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 4067 gacaagatggagagcttcttcctgggggagacgctcaagta 4107
>dbj|AK094878.1| Homo sapiens cDNA FLJ37559 fis, clone BRCOC2000186, highly similar to Homo sapiens endoplasmic reticulum alpha-mannosidase I mRNA Length = 2769 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 2039 gacaagatggagagcttcttcctgggggagacgctcaagta 2079
>dbj|AK074699.1| Homo sapiens cDNA FLJ90218 fis, clone MAMMA1002586, highly similar to Endoplasmic reticulum mannosyl-oligosaccharide1,2-alpha-mannosidase (EC 3.2.1.113) Length = 2338 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 1608 gacaagatggagagcttcttcctgggggagacgctcaagta 1648
>dbj|AK074559.1| Homo sapiens cDNA FLJ90078 fis, clone HEMBA1004505, highly similar to Endoplasmic reticulum mannosyl-oligosaccharide1,2-alpha-mannosidase (EC 3.2.1.113) Length = 1327 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 597 gacaagatggagagcttcttcctgggggagacgctcaagta 637
>dbj|AK144486.1| Mus musculus 1 month neonate cerebellum cDNA, RIKEN full-length enriched library, clone:G630077P12 product:mannosidase, alpha, class 1C, member 1, full insert sequence Length = 4490 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 522 cagagcttcttcctagcagagacgctcaagtacctctatct 562 |||||||||||||| || |||||||| || ||||||||||| Sbjct: 2318 cagagcttcttcctggctgagacgctgaaatacctctatct 2358
>dbj|AK048880.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230078J17 product:MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE IC (EC 3.2.1.113) (PROCESSING ALPHA-1,2-MANNOSIDASE IC) (ALPHA-1,2-MANNOSIDASE IC) (MANNOSIDASE ALPHA CLASS 1A MEMBER 3) (HMIC) homolog [Homo sapiens], full insert sequence Length = 1637 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 522 cagagcttcttcctagcagagacgctcaagtacctctatct 562 |||||||||||||| || |||||||| || ||||||||||| Sbjct: 786 cagagcttcttcctggctgagacgctgaaatacctctatct 826
>ref|NM_016219.2| Homo sapiens mannosidase, alpha, class 1B, member 1 (MAN1B1), mRNA Length = 2769 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 2033 gacaagatggagagcttcttcctgggggagacgctcaagta 2073
>dbj|AK130143.1| Homo sapiens cDNA FLJ26633 fis, clone MPC07672, highly similar to Homo sapiens alpha 1,2-mannosidase (LOC51697) Length = 1908 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 1177 gacaagatggagagcttcttcctgggggagacgctcaagta 1217
>gb|AF148509.1|AF148509 Homo sapiens alpha 1,2-mannosidase mRNA, complete cds Length = 2739 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 2010 gacaagatggagagcttcttcctgggggagacgctcaagta 2050
>gb|BC006079.1| Homo sapiens mannosidase, alpha, class 1B, member 1, mRNA (cDNA clone MGC:12553 IMAGE:3959196), complete cds Length = 2725 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 1975 gacaagatggagagcttcttcctgggggagacgctcaagta 2015
>gb|BC002953.1| Homo sapiens mannosidase, alpha, class 1B, member 1, mRNA (cDNA clone MGC:1215 IMAGE:3533651), complete cds Length = 2716 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 1966 gacaagatggagagcttcttcctgggggagacgctcaagta 2006
>gb|AF145732.1|AF145732 Homo sapiens endoplasmic reticulum alpha-mannosidase I mRNA, complete cds Length = 2687 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 1950 gacaagatggagagcttcttcctgggggagacgctcaagta 1990
>dbj|AB209276.1| Homo sapiens mRNA for alpha 1,2-mannosidase variant protein Length = 3483 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagta 553 ||||||||| ||||||||||||| | |||||||||||||| Sbjct: 2753 gacaagatggagagcttcttcctgggggagacgctcaagta 2793
>ref|XM_493697.2| Oryza sativa (japonica cultivar-group), mRNA Length = 2204 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 204 ctcgcgctcctcttcttcgtcttcgtcgccgc 235 |||||||||||||||||| ||||| ||||||| Sbjct: 168 ctcgcgctcctcttcttcttcttcttcgccgc 137
>ref|NM_001030582.1| Gallus gallus DEAH (Asp-Glu-Ala-His) box polypeptide 38 (DHX38), mRNA Length = 4145 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcgggg 155 |||||||||||||||||||||||| Sbjct: 550 tcctcgtcctcctcctcgtcgggg 527
>gb|BC079920.1| Xenopus laevis MGC78858 protein, mRNA (cDNA clone MGC:78858 IMAGE:3403140), complete cds Length = 4083 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 513 gacaagatgcagagcttcttcctagcagagacgctcaagtacct 556 ||||||||| ||||||||||||| | ||||| ||||||||||| Sbjct: 1950 gacaagatggagagcttcttcctgggcgagaccctcaagtacct 1993
>emb|AJ719786.1| Gallus gallus mRNA for hypothetical protein, clone 6i5 Length = 4145 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcgggg 155 |||||||||||||||||||||||| Sbjct: 550 tcctcgtcctcctcctcgtcgggg 527
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 204 ctcgcgctcctcttcttcgtcttcgtcgccgc 235 |||||||||||||||||| ||||| ||||||| Sbjct: 1628936 ctcgcgctcctcttcttcttcttcttcgccgc 1628905 Score = 40.1 bits (20), Expect = 7.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 210 ctcctcttcttcgtcttcgtcgccgccaccttcgcc 245 |||||||||||| ||||| ||||| || |||||||| Sbjct: 29080758 ctcctcttcttcctcttcctcgccaccgccttcgcc 29080793 Score = 40.1 bits (20), Expect = 7.6 Identities = 34/38 (89%), Gaps = 3/38 (7%) Strand = Plus / Plus Query: 205 tcgcgctcctcttcttcgtcttcgtcgccgccaccttc 242 ||||||||||||||||| |||| ||||||||||||| Sbjct: 9264960 tcgcgctcctcttcttc---ttcgccgccgccaccttc 9264994 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 214 tcttcttcgtcttcgtcgccgcca 237 ||||||||||||||||| |||||| Sbjct: 402469 tcttcttcgtcttcgtcaccgcca 402446
>dbj|AP000559.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0493C11 Length = 143113 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 204 ctcgcgctcctcttcttcgtcttcgtcgccgc 235 |||||||||||||||||| ||||| ||||||| Sbjct: 32107 ctcgcgctcctcttcttcttcttcttcgccgc 32076
>dbj|AK065212.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002G02, full insert sequence Length = 2203 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 204 ctcgcgctcctcttcttcgtcttcgtcgccgc 235 |||||||||||||||||| ||||| ||||||| Sbjct: 168 ctcgcgctcctcttcttcttcttcttcgccgc 137
>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete sequence Length = 145507 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 133 cctcgtcctcctcctcgtcgggg 155 ||||||||||||||||||||||| Sbjct: 8744 cctcgtcctcctcctcgtcgggg 8766
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 133 cctcgtcctcctcctcgtcgggg 155 ||||||||||||||||||||||| Sbjct: 32356616 cctcgtcctcctcctcgtcgggg 32356638 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 cggtcctcgtcctcctcctcgtcg 152 |||||||||||||| ||||||||| Sbjct: 8218994 cggtcctcgtcctcgtcctcgtcg 8218971
>gb|AC107707.10| Mus musculus chromosome 1, clone RP24-268C13, complete sequence Length = 178000 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 486 agggatgtgaatagtggtgaaaa 508 ||||||||||||||||||||||| Sbjct: 45448 agggatgtgaatagtggtgaaaa 45470
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 133 cctcgtcctcctcctcgtcgggg 155 ||||||||||||||||||||||| Sbjct: 90383 cctcgtcctcctcctcgtcgggg 90405
>dbj|AB169008.1| Macaca fascicularis testis cDNA, clone: QtsA-16527, similar to human calpain 12 (CAPN12), mRNA, RefSeq: NM_144691.3 Length = 2378 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcggg 154 ||||||||||||||||||||||| Sbjct: 996 tcctcgtcctcctcctcgtcggg 974
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 133 cctcgtcctcctcctcgtcgggg 155 ||||||||||||||||||||||| Sbjct: 32447126 cctcgtcctcctcctcgtcgggg 32447148 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ctcctcctcgtcgggggcgt 159 |||||||||||||||||||| Sbjct: 24838778 ctcctcctcgtcgggggcgt 24838759 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 cggtcctcgtcctcctcctcgtcg 152 |||||||||||||| ||||||||| Sbjct: 8216829 cggtcctcgtcctcgtcctcgtcg 8216806
>gb|AF286005.1|AF286005 Plasmodium falciparum adhesion protein EMP1 gene, partial cds Length = 1440 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 211 tcctcttcttcgtcttcgtcgcc 233 ||||||||||||||||||||||| Sbjct: 1157 tcctcttcttcgtcttcgtcgcc 1135
>dbj|AK106487.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-H09, full insert sequence Length = 1471 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 133 cctcgtcctcctcctcgtcgggg 155 ||||||||||||||||||||||| Sbjct: 99 cctcgtcctcctcctcgtcgggg 77
>gb|AY107497.1| Zea mays PCO100488 mRNA sequence Length = 836 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 203 cctcgcgctcctcttcttcgtcttcgtcgcc 233 |||||||||||||||||||||| || ||||| Sbjct: 413 cctcgcgctcctcttcttcgtcgtcttcgcc 443
>ref|XM_476023.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1272 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 135 tcgtcctcctcctcgtcggggg 156 |||||||||||||||||||||| Sbjct: 1175 tcgtcctcctcctcgtcggggg 1154
>ref|XM_464603.1| Oryza sativa (japonica cultivar-group), mRNA Length = 279 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 131 gtcctcgtcctcctcctcgtcg 152 |||||||||||||||||||||| Sbjct: 37 gtcctcgtcctcctcctcgtcg 58
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 tcgtcctcctcctcgtcggggg 156 |||||||||||||||||||||| Sbjct: 103721 tcgtcctcctcctcgtcggggg 103742
>gb|AC124621.18| Mus musculus chromosome 1, clone RP23-393P20, complete sequence Length = 180208 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 cgcacgcacgcacacgcgcgcg 34 |||||||||||||||||||||| Sbjct: 77329 cgcacgcacgcacacgcgcgcg 77350
>ref|XM_854885.1| PREDICTED: Canis familiaris similar to aristaless related homeobox, transcript variant 5 (LOC608251), mRNA Length = 1794 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 209 gctcctcttcttcgtcttcgtc 230 |||||||||||||||||||||| Sbjct: 718 gctcctcttcttcgtcttcgtc 697
>ref|XM_844762.1| PREDICTED: Canis familiaris similar to aristaless related homeobox, transcript variant 4 (LOC608251), mRNA Length = 1824 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 209 gctcctcttcttcgtcttcgtc 230 |||||||||||||||||||||| Sbjct: 748 gctcctcttcttcgtcttcgtc 727
>ref|XR_005150.1| PREDICTED: Mus musculus RIKEN cDNA 4930465K10 gene (4930465K10Rik), misc RNA Length = 2131 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 cgcacgcacgcacacgcgcgcg 34 |||||||||||||||||||||| Sbjct: 620 cgcacgcacgcacacgcgcgcg 641
>ref|NM_020379.1| Homo sapiens mannosidase, alpha, class 1C, member 1 (MAN1C1), mRNA Length = 2912 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Plus Query: 521 gcagagcttcttcctagcagagacgctcaagtacctctatct 562 |||||||||||| ||||| ||||| || ||||| |||||||| Sbjct: 2067 gcagagcttctttctagcggagacactaaagtatctctatct 2108
>gb|BC038959.1| Homo sapiens mannosidase, alpha, class 1C, member 1, mRNA (cDNA clone IMAGE:6050342), with apparent retained intron Length = 2484 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Plus Query: 521 gcagagcttcttcctagcagagacgctcaagtacctctatct 562 |||||||||||| ||||| ||||| || ||||| |||||||| Sbjct: 1655 gcagagcttctttctagcggagacactaaagtatctctatct 1696
>emb|AL035251.11|HS705O1 Human DNA sequence from clone RP4-705O1 on chromosome 20q11.2 Contains a novel gene, complete sequence Length = 161888 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 cgcacgcacgcacacgcgcgcg 34 |||||||||||||||||||||| Sbjct: 34779 cgcacgcacgcacacgcgcgcg 34758
>gb|AC113044.9| Mus musculus chromosome 1, clone RP23-243J5, complete sequence Length = 186799 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 cgcacgcacgcacacgcgcgcg 34 |||||||||||||||||||||| Sbjct: 173958 cgcacgcacgcacacgcgcgcg 173979
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 cgcacgcacgcacacgcgcgcg 34 |||||||||||||||||||||| Sbjct: 67061 cgcacgcacgcacacgcgcgcg 67082
>emb|CR932802.1| Mus musculus chromosome 2, clone GenSys-198F12 strain 129/Sv, complete sequence Length = 99647 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 cgcacgcacgcacacgcgcgcg 34 |||||||||||||||||||||| Sbjct: 87630 cgcacgcacgcacacgcgcgcg 87609
>emb|CR932799.1| Mus musculus chromosome 2, clone RPCI-22-207E02 strain 129/Sv, complete sequence Length = 151675 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 cgcacgcacgcacacgcgcgcg 34 |||||||||||||||||||||| Sbjct: 32889 cgcacgcacgcacacgcgcgcg 32868
>emb|CR624971.1| full-length cDNA clone CS0DI054YE05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1286 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Plus Query: 521 gcagagcttcttcctagcagagacgctcaagtacctctatct 562 |||||||||||| ||||| ||||| || ||||| |||||||| Sbjct: 486 gcagagcttctttctagcggagacactaaagtatctctatct 527
>gb|AF318353.1|AF318353 Homo sapiens pp6318 mRNA, complete cds Length = 3722 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Plus Query: 521 gcagagcttcttcctagcagagacgctcaagtacctctatct 562 |||||||||||| ||||| ||||| || ||||| |||||||| Sbjct: 2859 gcagagcttctttctagcggagacactaaagtatctctatct 2900
>gb|AC182739.1| Gasterosteus aculeatus clone VMRC26-26K03, complete sequence Length = 171340 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 cgcacgcacgcacacgcgcgcg 34 |||||||||||||||||||||| Sbjct: 29176 cgcacgcacgcacacgcgcgcg 29197
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 tcgtcctcctcctcgtcggggg 156 |||||||||||||||||||||| Sbjct: 29325064 tcgtcctcctcctcgtcggggg 29325085 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ccgcacgcacgcacacgcgcgcgt 35 |||||||||||||| ||||||||| Sbjct: 27363195 ccgcacgcacgcacgcgcgcgcgt 27363172
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgtcg 152 |||||||||||||||||||||| Sbjct: 6260687 gtcctcgtcctcctcctcgtcg 6260666 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 cgtcctcctcctcgtcgggggcgt 159 |||||||||||||||||| ||||| Sbjct: 20200788 cgtcctcctcctcgtcggcggcgt 20200811
>gb|AF261655.1|AF261655 Homo sapiens 1,2-alpha-mannosidase IC mRNA, complete cds Length = 2912 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Plus Query: 521 gcagagcttcttcctagcagagacgctcaagtacctctatct 562 |||||||||||| ||||| ||||| || ||||| |||||||| Sbjct: 2067 gcagagcttctttctagcggagacactaaagtatctctatct 2108
>dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1267_F10 Length = 162669 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgtcg 152 |||||||||||||||||||||| Sbjct: 58074 gtcctcgtcctcctcctcgtcg 58053
>emb|BX571892.9| Mouse DNA sequence from clone RP23-207B21 on chromosome 2, complete sequence Length = 170046 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 cgcacgcacgcacacgcgcgcg 34 |||||||||||||||||||||| Sbjct: 63208 cgcacgcacgcacacgcgcgcg 63187
>emb|AL671906.15| Mouse DNA sequence from clone RP23-300B11 on chromosome X, complete sequence Length = 216692 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 14 gcacgcacgcacacgcgcgcgt 35 |||||||||||||||||||||| Sbjct: 82354 gcacgcacgcacacgcgcgcgt 82333
>gb|AF126550.1|AF126550 Glycine max mannosyl-oligosaccharide 1,2-alpha-mannosidase (Man1) mRNA, complete cds Length = 2528 Score = 44.1 bits (22), Expect = 0.49 Identities = 88/110 (80%) Strand = Plus / Plus Query: 444 tttgagaaaaactcccgcatagcatctggatacgtgggactaagggatgtgaatagtggt 503 |||||||| ||||||||||||| || || || || ||||| | |||||| |||||||| Sbjct: 1787 tttgagaagaactcccgcatagagtcaggctatgttggactgaaggatgttaatagtgga 1846 Query: 504 gaaaaggacgacaagatgcagagcttcttcctagcagagacgctcaagta 553 | || ||| ||| |||||| |||||||| || || ||||| || ||||| Sbjct: 1847 gtcaaagacaacatgatgcaaagcttctttcttgcggagaccctgaagta 1896
>dbj|AK064253.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-C07, full insert sequence Length = 1538 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 135 tcgtcctcctcctcgtcggggg 156 |||||||||||||||||||||| Sbjct: 1251 tcgtcctcctcctcgtcggggg 1230
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 cgcacgcacgcacacgcgcgcg 34 |||||||||||||||||||||| Sbjct: 22626 cgcacgcacgcacacgcgcgcg 22647
>emb|BX005345.12| Mouse DNA sequence from clone RP23-344C21 on chromosome X, complete sequence Length = 208344 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 cgcacgcacgcacacgcgcgcg 34 |||||||||||||||||||||| Sbjct: 136147 cgcacgcacgcacacgcgcgcg 136126
>gb|AF005035.1|AF005035 Spodoptera frugiperda alpha 1,2-mannosidase mRNA, complete cds Length = 2167 Score = 44.1 bits (22), Expect = 0.49 Identities = 31/34 (91%) Strand = Plus / Plus Query: 521 gcagagcttcttcctagcagagacgctcaagtac 554 ||||||||||||||| || ||||| ||||||||| Sbjct: 1863 gcagagcttcttcctcgctgagacactcaagtac 1896
>emb|AL671998.10| Mouse DNA sequence from clone RP23-71G11 on chromosome X, complete sequence Length = 220669 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 cgcacgcacgcacacgcgcgcg 34 |||||||||||||||||||||| Sbjct: 92251 cgcacgcacgcacacgcgcgcg 92230
>ref|NM_119138.1| Arabidopsis thaliana unknown protein AT4G29920 mRNA, complete cds Length = 3054 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 tcctcttcttcgtcttcgtcg 231 ||||||||||||||||||||| Sbjct: 2621 tcctcttcttcgtcttcgtcg 2601
>gb|AC157087.2| Mus musculus BAC clone RP23-287O24 from chromosome 9, complete sequence Length = 226149 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 cgcacgcacgcacacgcgcgc 33 ||||||||||||||||||||| Sbjct: 127016 cgcacgcacgcacacgcgcgc 127036
>gb|AC170598.2| Mus musculus BAC clone RP23-349D13 from chromosome 9, complete sequence Length = 217146 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 cgcacgcacgcacacgcgcgc 33 ||||||||||||||||||||| Sbjct: 142948 cgcacgcacgcacacgcgcgc 142928
>ref|XM_483641.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2212 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 301 tcctcgtcctcctcctcgtcg 321
>ref|XM_507320.1| PREDICTED Oryza sativa (japonica cultivar-group), P0544G09.9 mRNA Length = 2218 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 302 tcctcgtcctcctcctcgtcg 322
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 cgcgctcctcttcttcgtcttcgtc 230 ||||||||||||| ||||||||||| Sbjct: 980281 cgcgctcctcttcgtcgtcttcgtc 980305
>ref|XM_476599.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3268 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 394 tcctcgtcctcctcctcgtcg 374
>ref|XM_617861.2| PREDICTED: Bos taurus similar to myelin transcription factor 1-like, transcript variant 1 (LOC537684), mRNA Length = 4452 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgtc 151 ||||||||||||||||||||| Sbjct: 1073 gtcctcgtcctcctcctcgtc 1053
>ref|XM_879346.1| PREDICTED: Bos taurus hypothetical protein LOC615208 (LOC615208), mRNA Length = 366 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgtc 151 ||||||||||||||||||||| Sbjct: 288 gtcctcgtcctcctcctcgtc 268 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgtc 151 ||||||||||||||||||||| Sbjct: 270 gtcctcgtcctcctcctcgtc 250
>ref|XM_417735.1| PREDICTED: Gallus gallus similar to Mannosyl-oligosaccharide 1,2-alpha-mannosidase IC (Processing alpha-1,2-mannosidase IC) (Alpha-1,2-mannosidase IC) (Mannosidase alpha class 1C member 1) (HMIC) (LOC419588), mRNA Length = 2397 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 522 cagagcttcttcctagcagagacgctcaagtacctctatct 562 ||||| || ||||| |||||||| || |||||||||||||| Sbjct: 1516 cagagttttttccttgcagagactctgaagtacctctatct 1556
>ref|XM_955681.1| Neurospora crassa OR74A hypothetical protein (NCU01257.1) partial mRNA Length = 1311 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 428 tcctcgtcctcctcctcgtcg 408
>ref|XM_326749.1| Neurospora crassa OR74A hypothetical protein (NCU01257.1) partial mRNA Length = 1311 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 428 tcctcgtcctcctcctcgtcg 408
>ref|XM_706520.1| Candida albicans SC5314 hypothetical protein (CaO19.10878), mRNA Length = 1416 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 ctcctcttcttcgtcttcgtc 230 ||||||||||||||||||||| Sbjct: 930 ctcctcttcttcgtcttcgtc 910
>gb|AY581851.1| Arachis hypogaea conarachin mRNA, partial cds Length = 1418 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 ctcctcttcttcgtcttcgtc 230 ||||||||||||||||||||| Sbjct: 881 ctcctcttcttcgtcttcgtc 861
>gb|BC088557.1| Xenopus tropicalis protein inhibitor of activated STAT, 4, mRNA (cDNA clone MGC:97739 IMAGE:6987420), complete cds Length = 2435 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 ctcctcttcttcgtcttcgtc 230 ||||||||||||||||||||| Sbjct: 1449 ctcctcttcttcgtcttcgtc 1429
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 209 gctcctcttcttcgtcttcgtcgcc 233 |||||||||||||||| |||||||| Sbjct: 1879340 gctcctcttcttcgtcatcgtcgcc 1879316
>gb|AC140400.2| Mus musculus BAC clone RP24-178N19 from chromosome 1, complete sequence Length = 147632 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgtc 151 ||||||||||||||||||||| Sbjct: 5237 gtcctcgtcctcctcctcgtc 5217
>ref|XM_982844.1| PREDICTED: Mus musculus heterogeneous nuclear ribonucleoprotein U-like 2 (Hnrpul2), mRNA Length = 3265 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 1141 tcctcgtcctcctcctcgtcg 1121
>ref|XM_355145.4| PREDICTED: Mus musculus heterogeneous nuclear ribonucleoprotein U-like 2 (Hnrpul2), mRNA Length = 5726 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 1141 tcctcgtcctcctcctcgtcg 1121
>ref|XM_980053.1| PREDICTED: Mus musculus heterogeneous nuclear ribonucleoprotein U-like 2 (Hnrpul2), mRNA Length = 2471 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 443 tcctcgtcctcctcctcgtcg 423
>gb|AC138457.3| Mus musculus BAC clone RP23-358E1 from chromosome 19, complete sequence Length = 237854 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 gtcctcgtcctcctcctcgtc 151 ||||||||||||||||||||| Sbjct: 59038 gtcctcgtcctcctcctcgtc 59058
>gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0029K08, complete sequence Length = 136687 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 69732 tcctcgtcctcctcctcgtcg 69712
>gb|AF432231.1| Arachis hypogaea major allergen Arah1 gene, complete cds Length = 2674 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 ctcctcttcttcgtcttcgtc 230 ||||||||||||||||||||| Sbjct: 1957 ctcctcttcttcgtcttcgtc 1937
>gb|AC121956.3| Mus musculus BAC clone RP24-225I19 from chromosome 7, complete sequence Length = 191330 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 cgcacgcacgcacacgcgcgc 33 ||||||||||||||||||||| Sbjct: 101740 cgcacgcacgcacacgcgcgc 101720
>gb|AC129217.3| Mus musculus BAC clone RP24-458M20 from chromosome 19, complete sequence Length = 175796 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 53340 tcctcgtcctcctcctcgtcg 53320
>gb|AC121814.3| Mus musculus BAC clone RP23-457H19 from chromosome 15, complete sequence Length = 188928 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 cgcacgcacgcacacgcgcgc 33 ||||||||||||||||||||| Sbjct: 5042 cgcacgcacgcacacgcgcgc 5062
>ref|XM_814058.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053510363.320) partial mRNA Length = 1011 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 tcctcttcttcgtcttcgtcg 231 ||||||||||||||||||||| Sbjct: 374 tcctcttcttcgtcttcgtcg 354
>gb|AC126934.4| Mus musculus BAC clone RP24-172H9 from chromosome 1, complete sequence Length = 138637 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 gtcctcgtcctcctcctcgtc 151 ||||||||||||||||||||| Sbjct: 88366 gtcctcgtcctcctcctcgtc 88386
>ref|XM_797637.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053508875.20) partial mRNA Length = 684 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 tcctcttcttcgtcttcgtcg 231 ||||||||||||||||||||| Sbjct: 374 tcctcttcttcgtcttcgtcg 354
>emb|CR703211.2|CNS0G5JR Tetraodon nigroviridis full-length cDNA Length = 1326 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgtcgggg 155 |||||||||||| |||||||||||| Sbjct: 347 gtcctcgtcctcgtcctcgtcgggg 323
>emb|CR696935.2|CNS0G0PF Tetraodon nigroviridis full-length cDNA Length = 1362 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgtcgggg 155 |||||||||||| |||||||||||| Sbjct: 326 gtcctcgtcctcgtcctcgtcgggg 302
>gb|AC101527.12| Mus musculus chromosome 15, clone RP23-191D20, complete sequence Length = 193390 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 gtcctcgtcctcctcctcgtc 151 ||||||||||||||||||||| Sbjct: 114475 gtcctcgtcctcctcctcgtc 114495 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 114488 tcctcgtcctcctcctcgtc 114507 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 114338 tcctcgtcctcctcctcgtc 114357 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 114326 tcctcgtcctcctcctcgtc 114345
>gb|AC103627.6| Mus musculus chromosome 1, clone RP24-241N3, complete sequence Length = 201487 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 gtcctcgtcctcctcctcgtc 151 ||||||||||||||||||||| Sbjct: 152211 gtcctcgtcctcctcctcgtc 152231
>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09, complete sequence Length = 135363 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 14139 tcctcgtcctcctcctcgtcg 14159
>ref|XM_964259.1| PREDICTED: Tribolium castaneum similar to CG5012-PA (LOC657824), mRNA Length = 572 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 133 cctcgtcctcctcctcgtcgggggc 157 ||||||||||||||||| ||||||| Sbjct: 310 cctcgtcctcctcctcggcgggggc 286
>gb|AC128655.8| Homo sapiens 3 BAC RP11-260O18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 88017 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 342 ggtattcaactggaagaaaatccagcaat 370 |||| |||||||||||||||| ||||||| Sbjct: 65892 ggtagtcaactggaagaaaatacagcaat 65920
>gb|AF397732.1| Neurospora crassa pheromone precursor MFa-1 gene, complete cds Length = 5126 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 4251 tcctcgtcctcctcctcgtcg 4231
>gb|AC073153.16| Mus musculus Strain C57BL6/J chromosome 19 BAC, RP23-49P8 Complete Sequence, complete sequence Length = 220143 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 176657 tcctcgtcctcctcctcgtcg 176677
>ref|NM_001011455.1| Xenopus tropicalis protein inhibitor of activated STAT, 4 (pias4), mRNA Length = 2435 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 ctcctcttcttcgtcttcgtc 230 ||||||||||||||||||||| Sbjct: 1449 ctcctcttcttcgtcttcgtc 1429
>emb|BX294143.1| Pirellula sp. strain 1 complete genome; segment 11/24 Length = 303250 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 gtcgccgccaccttcgccttc 248 ||||||||||||||||||||| Sbjct: 14193 gtcgccgccaccttcgccttc 14173
>emb|BX294015.1|NCB10N12 Neurospora crassa DNA linkage group V BAC contig B10N12 Length = 70199 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 44602 tcctcgtcctcctcctcgtcg 44582
>emb|AL161575.2|ATCHRIV71 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 71 Length = 200001 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 tcctcttcttcgtcttcgtcg 231 ||||||||||||||||||||| Sbjct: 167737 tcctcttcttcgtcttcgtcg 167757
>emb|AL050352.1|ATF27B13 Arabidopsis thaliana DNA chromosome 4, BAC clone F27B13 (ESSA project) Length = 98401 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 tcctcttcttcgtcttcgtcg 231 ||||||||||||||||||||| Sbjct: 57664 tcctcttcttcgtcttcgtcg 57684
>emb|AL035476.7|PFMAL4P3 Plasmodium falciparum MAL4P3 Length = 349751 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 tcctcttcttcgtcttcgtcg 231 ||||||||||||||||||||| Sbjct: 22648 tcctcttcttcgtcttcgtcg 22668 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 tcctcttcttcgtcttcgtcg 231 ||||||||||||||||||||| Sbjct: 7509 tcctcttcttcgtcttcgtcg 7529
>emb|AJ291314.1|OCU291314 Oryctolagus cuniculus partial mRNA for Kv1.4 voltage-gated potassium channel (kv1.4 gene) Length = 386 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgtc 151 ||||||||||||||||||||| Sbjct: 360 gtcctcgtcctcctcctcgtc 340
>emb|AJ252741.1|HTU252741 Haliotis tuberculata partial H1 gene for hemocyanin, exons 1-17 Length = 28163 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 aattggaattcccagaaaaga 388 ||||||||||||||||||||| Sbjct: 25581 aattggaattcccagaaaaga 25561
>emb|CR394564.8| Zebrafish DNA sequence from clone DKEY-1K1 in linkage group 8, complete sequence Length = 227475 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 cgcacgcacgcacacgcgcgc 33 ||||||||||||||||||||| Sbjct: 106983 cgcacgcacgcacacgcgcgc 107003
>emb|CR858079.1| Pongo pygmaeus mRNA; cDNA DKFZp459N1635 (from clone DKFZp459N1635) Length = 2344 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 760 tcctcgtcctcctcctcgtcg 740
>ref|NM_205187.1| Gallus gallus SRY (sex determining region Y)-box 11 (SOX11), mRNA Length = 1977 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 1055 tcctcgtcctcctcctcgtcg 1035
>gb|AC090376.6| Homo sapiens chromosome 18, clone RP11-846C15, complete sequence Length = 206399 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 288 atttcccaattaaaaaatgaaataa 312 |||||||| |||||||||||||||| Sbjct: 141073 atttcccagttaaaaaatgaaataa 141097
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 ccggtcctcgtcctcctcctc 148 ||||||||||||||||||||| Sbjct: 42904 ccggtcctcgtcctcctcctc 42924
>gb|AC018626.8| Homo sapiens chromosome 18, clone RP11-678P20, complete sequence Length = 200204 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 288 atttcccaattaaaaaatgaaataa 312 |||||||| |||||||||||||||| Sbjct: 147936 atttcccagttaaaaaatgaaataa 147960
>gb|AF185591.1|AF185591 Mus musculus cyclin ania-6b gene, partial sequence Length = 40143 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 ttaaaaaatgaaataaaccag 317 ||||||||||||||||||||| Sbjct: 35791 ttaaaaaatgaaataaaccag 35771
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tccccggcgacgtcaccggag 55 ||||||||||||||||||||| Sbjct: 1693003 tccccggcgacgtcaccggag 1692983 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cctcctcctcgtcgggggcg 158 |||||||||||||||||||| Sbjct: 5010412 cctcctcctcgtcgggggcg 5010393
>gb|AC159314.3| Mus musculus BAC clone RP23-110E20 from chromosome 9, complete sequence Length = 201900 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 cgcacgcacgcacacgcgcgc 33 ||||||||||||||||||||| Sbjct: 65453 cgcacgcacgcacacgcgcgc 65433
>dbj|AK032708.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720407D17 product:hypothetical Glutamic acid-rich region/SAP domain containing protein, full insert sequence Length = 2690 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 271 tcctcgtcctcctcctcgtcg 251
>gb|AC146538.2| Gasterosteus aculeatus clone CH213-118G22, complete sequence Length = 211945 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 cgcacgcacgcacacgcgcgc 33 ||||||||||||||||||||| Sbjct: 135373 cgcacgcacgcacacgcgcgc 135393
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tcttcttcgtcttcgtcgccg 234 ||||||||||||||||||||| Sbjct: 25359448 tcttcttcgtcttcgtcgccg 25359468 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 212 cctcttcttcgtcttcgtcgccgcc 236 |||| |||||||||||||||||||| Sbjct: 10709264 cctcgtcttcgtcttcgtcgccgcc 10709240 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccgccgccatggctcgccgg 131 |||||||||||||||||||| Sbjct: 19000710 ccgccgccatggctcgccgg 19000729 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 tcgccgccaccttcgccttc 248 |||||||||||||||||||| Sbjct: 5325197 tcgccgccaccttcgccttc 5325216 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 tcgccgccaccttcgccttc 248 |||||||||||||||||||| Sbjct: 5317313 tcgccgccaccttcgccttc 5317332
>ref|XM_393530.2| PREDICTED: Apis mellifera similar to RhoGTPase activating protein; RARhoGAP (LOC410044), mRNA Length = 3665 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 ctcctcttcttcgtcttcgtcgccg 234 ||||||||| ||||||||||||||| Sbjct: 3449 ctcctcttcgtcgtcttcgtcgccg 3425
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 21411982 tcctcgtcctcctcctcgtcg 21411962 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 5958056 tcctcgtcctcctcctcgtcg 5958076
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 27402037 tcctcgtcctcctcctcgtcg 27402057
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 2123414 tcctcgtcctcctcctcgtcg 2123434
>ref|XM_396230.2| PREDICTED: Apis mellifera similar to Sodium/potassium/calcium exchanger (Na(+)/K(+)/Ca(2+)-exchange protein) (LOC412777), mRNA Length = 1977 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 210 ctcctcttcttcgtcttcgtcgccg 234 ||||||| ||||||||||||||||| Sbjct: 1909 ctcctctacttcgtcttcgtcgccg 1933
>gb|AC153497.8| Mus musculus 10 BAC RP23-226H21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 179741 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 gcacgcacgcacacgcgcgcg 34 ||||||||||||||||||||| Sbjct: 71526 gcacgcacgcacacgcgcgcg 71546
>gb|AC159461.1| Mus musculus BAC clone RP23-273I10 from chromosome 13, complete sequence Length = 152402 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgtc 151 ||||||||||||||||||||| Sbjct: 6229 gtcctcgtcctcctcctcgtc 6209
>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0544G09 Length = 137481 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 28832 tcctcgtcctcctcctcgtcg 28852
>dbj|AK119577.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-B08, full insert sequence Length = 2212 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 301 tcctcgtcctcctcctcgtcg 321
>dbj|AK101130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026C08, full insert sequence Length = 2217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 302 tcctcgtcctcctcctcgtcg 322
>gb|AC154578.2| Mus musculus BAC clone RP23-375N17 from 16, complete sequence Length = 203029 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 gtcctcgtcctcctcctcgtc 151 ||||||||||||||||||||| Sbjct: 32862 gtcctcgtcctcctcctcgtc 32882
>emb|CT573229.8| Zebrafish DNA sequence from clone DKEY-11D7 in linkage group 1, complete sequence Length = 146843 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 521 gcagagcttcttcctagcagagacgctcaagta 553 ||||||||||||||| || || ||||||||||| Sbjct: 93062 gcagagcttcttcctggctgaaacgctcaagta 93094
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 ctcgtcctcctcctcgtcggg 154 ||||||||||||||||||||| Sbjct: 321333 ctcgtcctcctcctcgtcggg 321313
>gb|U45972.1|OAU45972 Ovis aries microsatellite associated with the catalase gene Length = 130 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 cgcacgcacgcacacgcgcgc 33 ||||||||||||||||||||| Sbjct: 46 cgcacgcacgcacacgcgcgc 66
>dbj|AK065452.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025M19, full insert sequence Length = 3635 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 393 tcctcgtcctcctcctcgtcg 373
>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00 Length = 1457619 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 404 tcctattaataatgaaaggag 424 ||||||||||||||||||||| Sbjct: 827011 tcctattaataatgaaaggag 827031
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 79207 tcctcgtcctcctcctcgtcg 79227
>emb|CT573422.5| Mouse DNA sequence from clone RP24-76M8 on chromosome 9, complete sequence Length = 193236 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 cgcacgcacgcacacgcgcgc 33 ||||||||||||||||||||| Sbjct: 71319 cgcacgcacgcacacgcgcgc 71339
>gb|AC153825.7| Mus musculus 10 BAC RP23-70B19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 279677 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 gcacgcacgcacacgcgcgcg 34 ||||||||||||||||||||| Sbjct: 249455 gcacgcacgcacacgcgcgcg 249475
>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete sequence Length = 82895 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 214 tcttcttcgtcttcgtcgccgccaccttc 242 |||||||| |||||| ||||||||||||| Sbjct: 28488 tcttcttcttcttcgccgccgccaccttc 28460
>gb|AC102881.14| Mus musculus chromosome 1, clone RP24-389D14, complete sequence Length = 179888 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 cacgcacgcacacgcgcgcgt 35 ||||||||||||||||||||| Sbjct: 106216 cacgcacgcacacgcgcgcgt 106236
>gb|BC082638.1| Xenopus laevis hypothetical LOC494663, mRNA (cDNA clone MGC:81546 IMAGE:6862849), complete cds Length = 3635 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 ctcctcttcttcgtcttcgtc 230 ||||||||||||||||||||| Sbjct: 1579 ctcctcttcttcgtcttcgtc 1559
>emb|AL670236.9| Mouse DNA sequence from clone RP23-242K15 on chromosome 4, complete sequence Length = 232950 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 ttaaaaaatgaaataaaccag 317 ||||||||||||||||||||| Sbjct: 128153 ttaaaaaatgaaataaaccag 128133
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 21722181 tcctcgtcctcctcctcgtcg 21722161 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 6024533 tcctcgtcctcctcctcgtcg 6024553
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tcttcttcgtcttcgtcgccg 234 ||||||||||||||||||||| Sbjct: 25287624 tcttcttcgtcttcgtcgccg 25287644 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 212 cctcttcttcgtcttcgtcgccgcc 236 |||| |||||||||||||||||||| Sbjct: 10708963 cctcgtcttcgtcttcgtcgccgcc 10708939 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 ccgccgccatggctcgccgg 131 |||||||||||||||||||| Sbjct: 18926937 ccgccgccatggctcgccgg 18926956 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 tcgccgccaccttcgccttc 248 |||||||||||||||||||| Sbjct: 5325179 tcgccgccaccttcgccttc 5325198 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 tcgccgccaccttcgccttc 248 |||||||||||||||||||| Sbjct: 5317295 tcgccgccaccttcgccttc 5317314
>emb|AL831795.4|CNS08CA8 Oryza sativa chromosome 12, . BAC OSJNBb0085N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135105 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 212 cctcttcttcgtcttcgtcgccgcc 236 |||| |||||||||||||||||||| Sbjct: 74160 cctcgtcttcgtcttcgtcgccgcc 74136
>emb|AL844566.8| Mouse DNA sequence from clone RP23-173H17 on chromosome 2, complete sequence Length = 229583 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgtc 151 ||||||||||||||||||||| Sbjct: 77059 gtcctcgtcctcctcctcgtc 77039 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 77088 tcctcgtcctcctcctcgtc 77069 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 77076 tcctcgtcctcctcctcgtc 77057
>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152914 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 214 tcttcttcgtcttcgtcgccg 234 ||||||||||||||||||||| Sbjct: 26258 tcttcttcgtcttcgtcgccg 26278
>gb|AC147254.4| Mus musculus BAC clone RP24-147G7 from 1, complete sequence Length = 149476 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 131 gtcctcgtcctcctcctcgtc 151 ||||||||||||||||||||| Sbjct: 45472 gtcctcgtcctcctcctcgtc 45492
>emb|CT010569.11| Mouse DNA sequence from clone RP23-237G24 on chromosome 16, complete sequence Length = 238459 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgtc 151 ||||||||||||||||||||| Sbjct: 205506 gtcctcgtcctcctcctcgtc 205486
>gb|AC122263.5| Mus musculus BAC clone RP23-190O11 from 15, complete sequence Length = 207234 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 cgcacgcacgcacacgcgcgc 33 ||||||||||||||||||||| Sbjct: 2029 cgcacgcacgcacacgcgcgc 2009
>emb|CT571260.1| Medicago truncatula chromosome 5 clone mth2-35p14, COMPLETE SEQUENCE Length = 120436 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 tcctcttcttcgtcttcgtcg 231 ||||||||||||||||||||| Sbjct: 113061 tcctcttcttcgtcttcgtcg 113041
>gb|U12534.1|GGU12534 Gallus gallus Sox11 transcription factor (Sox11) mRNA, complete cds Length = 1977 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 1055 tcctcgtcctcctcctcgtcg 1035
>gb|AC161449.4| Mus musculus BAC clone RP24-124N18 from chromosome 13, complete sequence Length = 150173 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgtc 151 ||||||||||||||||||||| Sbjct: 98302 gtcctcgtcctcctcctcgtc 98282
>gb|L34402.1|ARQARAHI Arachis hypogaea (clone P41b) Ara h I mRNA, complete cds Length = 2032 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 ctcctcttcttcgtcttcgtc 230 ||||||||||||||||||||| Sbjct: 1522 ctcctcttcttcgtcttcgtc 1502
>emb|AL663048.12| Mouse DNA sequence from clone RP23-166N12 on chromosome X, complete sequence Length = 234817 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgtc 151 ||||||||||||||||||||| Sbjct: 86264 gtcctcgtcctcctcctcgtc 86244 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgtc 151 ||||||||||||||||||||| Sbjct: 86186 gtcctcgtcctcctcctcgtc 86166 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgtc 151 ||||||||||||||||||||| Sbjct: 86051 gtcctcgtcctcctcctcgtc 86031 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 86080 tcctcgtcctcctcctcgtc 86061 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 86068 tcctcgtcctcctcctcgtc 86049
>dbj|AB012237.1| Gallus gallus mRNA for SOX11, complete cds Length = 1509 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtcg 152 ||||||||||||||||||||| Sbjct: 902 tcctcgtcctcctcctcgtcg 882
>ref|NM_123079.1| Arabidopsis thaliana protein binding / transcription factor/ transferase, transferring glycosyl groups / zinc ion binding AT5G37200 mRNA, complete cds Length = 654 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgt 150 |||||||||||||||||||| Sbjct: 636 gtcctcgtcctcctcctcgt 617
>gb|AC153490.1| Mus musculus BAC RP23-210M12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 145026 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 caattaaaaaatgaaataaa 313 |||||||||||||||||||| Sbjct: 36473 caattaaaaaatgaaataaa 36492
>gb|BC053076.1| Mus musculus SAPS domain family, member 1, mRNA (cDNA clone MGC:62441 IMAGE:5698212), complete cds Length = 3812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 2509 tcctcgtcctcctcctcgtc 2490
>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete sequence Length = 166185 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 78918 tcctcgtcctcctcctcgtc 78937
>ref|XM_550452.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1417 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 tcttcttcgtcttcgtcgccgcca 237 ||||||||||||||||| |||||| Sbjct: 27 tcttcttcgtcttcgtcaccgcca 50
>ref|XM_638408.1| Dictyostelium discoideum hypothetical protein (DDB0217693), partial mRNA Length = 7551 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 tcccaattaaaaaatgaaat 310 |||||||||||||||||||| Sbjct: 6569 tcccaattaaaaaatgaaat 6550
>gb|AC132350.4| Mus musculus BAC clone RP24-95A6 from chromosome 6, complete sequence Length = 177167 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 52421 tcctcgtcctcctcctcgtc 52440
>ref|XM_507651.1| PREDICTED: Pan troglodytes similar to GATA binding protein 3 isoform 1; GATA-binding protein 3 (LOC450296), mRNA Length = 1982 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 cctcgtcctcctcctcgtcggggg 156 ||||||||||||||| |||||||| Sbjct: 979 cctcgtcctcctccttgtcggggg 1002
>ref|NM_172894.2| Mus musculus SAPS domain family, member 1 (Saps1), mRNA Length = 3812 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 2509 tcctcgtcctcctcctcgtc 2490
>ref|NM_192390.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1179 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 cctcgtcctcctcctcgtcg 152 |||||||||||||||||||| Sbjct: 33 cctcgtcctcctcctcgtcg 52
>ref|NM_191637.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2157 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 126 cgccggtcctcgtcctcctcctcg 149 ||||||||| |||||||||||||| Sbjct: 179 cgccggtccccgtcctcctcctcg 156
>ref|NM_006751.3| Homo sapiens sperm specific antigen 2 (SSFA2), mRNA Length = 4978 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 279 tcctcgtcctcctcctcgtc 260
>ref|NM_185777.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1428 Score = 40.1 bits (20), Expect = 7.6 Identities = 34/38 (89%), Gaps = 3/38 (7%) Strand = Plus / Plus Query: 205 tcgcgctcctcttcttcgtcttcgtcgccgccaccttc 242 ||||||||||||||||| |||| ||||||||||||| Sbjct: 203 tcgcgctcctcttcttc---ttcgccgccgccaccttc 237
>gb|U93872.2| Kaposi's sarcoma-associated herpesvirus glycoprotein M, DNA replication protein, glycoprotein, DNA replication protein, FLICE inhibitory protein and v-cyclin genes, complete cds, and tegument protein gene, partial cds Length = 133661 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 126446 tcctcgtcctcctcctcgtc 126465 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 126434 tcctcgtcctcctcctcgtc 126453 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 126422 tcctcgtcctcctcctcgtc 126441 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 126410 tcctcgtcctcctcctcgtc 126429
>gb|AC158308.4| Mus musculus chromosome 3, clone RP23-182M12, complete sequence Length = 176856 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 85244 tcctcgtcctcctcctcgtc 85225
>gb|AF050740.1| Plasmodium falciparum variant-specific surface protein (varph17) gene, partial cds Length = 9419 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 tcctcttcttcgtcttcgtc 230 |||||||||||||||||||| Sbjct: 6915 tcctcttcttcgtcttcgtc 6896
>gb|BC036690.1| Homo sapiens lemur tyrosine kinase 3, mRNA (cDNA clone IMAGE:5261248), partial cds Length = 2582 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 1552 tcctcgtcctcctcctcgtc 1533
>ref|XM_606562.2| PREDICTED: Bos taurus similar to mannosidase, alpha, class 1A, member 1 (LOC528150), partial mRNA Length = 970 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 521 gcagagcttcttcctagcagagac 544 ||||||||||||||| |||||||| Sbjct: 814 gcagagcttcttcctggcagagac 837
>ref|XM_423483.1| PREDICTED: Gallus gallus similar to KIAA1754-like (LOC425762), mRNA Length = 1172 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 487 tcctcgtcctcctcctcgtc 468
>ref|XM_607555.2| PREDICTED: Bos taurus similar to Zinc finger protein 40 (Human immunodeficiency virus type I enhancer-binding protein 1) (HIV-EP1) (Major histocompatibility complex binding protein 1) (MBP-1) (Positive regulatory domain II binding factor 1) (PRDII-BF1) (LOC529115), mRNA Length = 8901 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgt 150 |||||||||||||||||||| Sbjct: 6825 gtcctcgtcctcctcctcgt 6806
>ref|XM_367703.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07614.4) partial mRNA Length = 2763 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ggtcctcgtcctcctcctcg 149 |||||||||||||||||||| Sbjct: 478 ggtcctcgtcctcctcctcg 459
>ref|XM_588485.2| PREDICTED: Bos taurus similar to zinc finger protein 366 (LOC539632), mRNA Length = 2229 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgt 150 |||||||||||||||||||| Sbjct: 1875 gtcctcgtcctcctcctcgt 1856
>gb|AC137592.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0035B22, complete sequence Length = 155788 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 cgccgccatggctcgccggt 132 |||||||||||||||||||| Sbjct: 148018 cgccgccatggctcgccggt 148037
>gb|AY662692.1| Sus scrofa 6A3-5 protein mRNA, complete cds Length = 5685 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 3738 tcctcgtcctcctcctcgtc 3719
>gb|AC093956.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1263_E10, complete sequence Length = 116469 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 ccgcacgcacgcacacgcgcgcgt 35 |||||||||||||| ||||||||| Sbjct: 75652 ccgcacgcacgcacgcgcgcgcgt 75629
>gb|BC055743.1| Mus musculus neurogenin 2, mRNA (cDNA clone MGC:67057 IMAGE:6808442), complete cds Length = 2244 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 445 tcctcgtcctcctcctcgtc 426
>ref|XM_954997.1| Neurospora crassa OR74A hypothetical protein (NCU05830.1) partial mRNA Length = 1980 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 221 cgtcttcgtcgccgccaccttcgccttc 248 |||||||||| ||||| ||||||||||| Sbjct: 1020 cgtcttcgtcaccgccgccttcgccttc 1047
>gb|BC003070.2| Homo sapiens GATA binding protein 3, mRNA (cDNA clone MGC:2346 IMAGE:3504200), complete cds Length = 2306 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 cctcgtcctcctcctcgtcggggg 156 ||||||||||||||| |||||||| Sbjct: 858 cctcgtcctcctccttgtcggggg 881
>gb|BC048322.1| Homo sapiens chromosome 2 open reading frame 31, mRNA (cDNA clone IMAGE:4449622), with apparent retained intron Length = 2334 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 atgaaaggagggaaaaggtcaagg 438 |||||| ||||||||||||||||| Sbjct: 92 atgaaatgagggaaaaggtcaagg 69
>ref|XM_325684.1| Neurospora crassa OR74A hypothetical protein (NCU05830.1) partial mRNA Length = 1980 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 221 cgtcttcgtcgccgccaccttcgccttc 248 |||||||||| ||||| ||||||||||| Sbjct: 1020 cgtcttcgtcaccgccgccttcgccttc 1047
>ref|XM_593542.2| PREDICTED: Bos taurus protein disulfide isomerase related protein, transcript variant 1 (erp70), mRNA Length = 2865 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 250 tcctcgtcctcctcctcgtc 231
>ref|XM_876208.1| PREDICTED: Bos taurus protein disulfide isomerase related protein, transcript variant 2 (erp70), mRNA Length = 1380 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 250 tcctcgtcctcctcctcgtc 231
>gb|AC161197.9| Mus musculus chromosome 7, clone RP23-179K11, complete sequence Length = 240657 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 134076 tcctcgtcctcctcctcgtc 134057
>ref|NM_009718.2| Mus musculus neurogenin 2 (Neurog2), mRNA Length = 2244 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 445 tcctcgtcctcctcctcgtc 426
>gb|AC139885.3| Mus musculus BAC clone RP23-349N15 from chromosome 9, complete sequence Length = 207340 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 127746 tcctcgtcctcctcctcgtc 127765
>ref|XR_003551.1| PREDICTED: Mus musculus hypothetical protein LOC671741 (LOC671741), mRNA Length = 970 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 158 tcctcgtcctcctcctcgtc 139
>ref|XR_004982.1| PREDICTED: Mus musculus hypothetical protein LOC676878 (LOC676878), mRNA Length = 970 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 158 tcctcgtcctcctcctcgtc 139
>ref|XM_975286.1| PREDICTED: Mus musculus RIKEN cDNA 2900045O20 gene (2900045O20Rik), mRNA Length = 189 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 116 tcctcgtcctcctcctcgtc 97
>ref|XR_002026.1| PREDICTED: Mus musculus hypothetical protein LOC667453 (LOC667453), mRNA Length = 526 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 387 tcctcgtcctcctcctcgtc 368
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome Length = 139962 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgt 150 |||||||||||||||||||| Sbjct: 84705 gtcctcgtcctcctcctcgt 84686
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome Length = 137241 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gtcctcgtcctcctcctcgt 150 |||||||||||||||||||| Sbjct: 83552 gtcctcgtcctcctcctcgt 83533
>ref|XM_543783.2| PREDICTED: Canis familiaris similar to AE binding protein 2 (LOC486656), mRNA Length = 3918 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 323 tcctcgtcctcctcctcgtc 304
>gb|BC064499.1| Homo sapiens sperm specific antigen 2, mRNA (cDNA clone MGC:71359 IMAGE:6251533), complete cds Length = 4891 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 287 tcctcgtcctcctcctcgtc 268
>gb|AF148805.2| Human herpesvirus 8 isolate GK18, complete genome Length = 137969 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 126323 tcctcgtcctcctcctcgtc 126342 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 126311 tcctcgtcctcctcctcgtc 126330 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 126299 tcctcgtcctcctcctcgtc 126318 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 126287 tcctcgtcctcctcctcgtc 126306
>gb|AY497006.1| Homo sapiens GATA binding protein 3 (GATA3) gene, complete cds Length = 22376 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 cctcgtcctcctcctcgtcggggg 156 ||||||||||||||| |||||||| Sbjct: 4917 cctcgtcctcctccttgtcggggg 4940
>ref|XM_753326.1| Ustilago maydis 521 hypothetical protein (UM02272.1) partial mRNA Length = 414 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 182 tcctcgtcctcctcctcgtc 163
>ref|XM_542166.2| PREDICTED: Canis familiaris similar to Zinc finger and BTB domain containing protein 7 (Leukemia/lymphoma related factor) (Factor that binds to inducer of short transcripts protein 1) (Factor binding IST protein 1) (FBI-1) (HIV-1 1st-binding protein 1) (TTF-I interacting pept... (LOC485048), mRNA Length = 2032 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 1920 tcctcgtcctcctcctcgtc 1901
>ref|XM_540068.2| PREDICTED: Canis familiaris similar to myelin transcription factor 1-like, transcript variant 1 (LOC482954), mRNA Length = 3552 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 470 tcctcgtcctcctcctcgtc 451
>ref|XM_745190.1| Aspergillus fumigatus Af293 ribosomal protein S19 s16 (Afu1g05340) partial mRNA Length = 666 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 662 tcctcgtcctcctcctcgtc 643
>ref|XM_539463.2| PREDICTED: Canis familiaris similar to dynein, axonemal, heavy polypeptide 11 (LOC482346), mRNA Length = 13809 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 113 tcctcgtcctcctcctcgtc 94
>gb|AC107792.10| Mus musculus chromosome 17, clone RP23-83F8, complete sequence Length = 253013 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 78425 tcctcgtcctcctcctcgtc 78406
>ref|XM_548232.2| PREDICTED: Canis familiaris similar to Peripheral-type benzodiazepine receptor-associated protein 1 (PRAX-1) (Peripheral benzodiazepine receptor interacting protein) (PBR-IP) (RIM binding protein 1) (RIM-BP1) (LOC491112), mRNA Length = 5424 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 3761 tcctcgtcctcctcctcgtc 3742
>gb|AC123813.4| Mus musculus BAC clone RP24-229D8 from chromosome 8, complete sequence Length = 175377 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cacgcacgcacacgcgcgcg 34 |||||||||||||||||||| Sbjct: 119500 cacgcacgcacacgcgcgcg 119519
>gb|AC127549.3| Mus musculus BAC clone RP24-510G5 from chromosome 5, complete sequence Length = 152564 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 122625 tcctcgtcctcctcctcgtc 122644
>gb|AC122459.2| Mus musculus BAC clone RP24-273F21 from chromosome 15, complete sequence Length = 156807 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 95982 tcctcgtcctcctcctcgtc 96001 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 95970 tcctcgtcctcctcctcgtc 95989 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 95958 tcctcgtcctcctcctcgtc 95977 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 95946 tcctcgtcctcctcctcgtc 95965 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 95934 tcctcgtcctcctcctcgtc 95953 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 95922 tcctcgtcctcctcctcgtc 95941
>ref|XM_533114.2| PREDICTED: Canis familiaris similar to Cdc42 effector protein 4 (LOC475907), mRNA Length = 1255 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 1242 tcctcgtcctcctcctcgtc 1223
>gb|AC105404.4| Mus musculus BAC clone RP24-112M13 from chromosome 16, complete sequence Length = 127531 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 59555 tcctcgtcctcctcctcgtc 59574
>gb|AC121798.3| Mus musculus BAC clone RP23-426H21 from chromosome 2, complete sequence Length = 209189 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 55589 tcctcgtcctcctcctcgtc 55608 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 55577 tcctcgtcctcctcctcgtc 55596 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 55565 tcctcgtcctcctcctcgtc 55584
>gb|AC125223.3| Mus musculus BAC clone RP23-31C10 from 13, complete sequence Length = 221903 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cacgcacgcacacgcgcgcg 34 |||||||||||||||||||| Sbjct: 75333 cacgcacgcacacgcgcgcg 75314
>gb|AC112256.4| Mus musculus BAC clone RP23-40C8 from 10, complete sequence Length = 157928 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 51872 tcctcgtcctcctcctcgtc 51853 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 51860 tcctcgtcctcctcctcgtc 51841
>gb|AC116582.3| Mus musculus BAC clone RP23-340C13 from 9, complete sequence Length = 214625 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 gagatttcccaattaaaaaatgaa 308 |||||| ||||||||||||||||| Sbjct: 17721 gagattacccaattaaaaaatgaa 17698
>emb|CR728100.2|CNS0GOQY Tetraodon nigroviridis full-length cDNA Length = 2145 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 1045 tcctcgtcctcctcctcgtc 1026
>gb|AC113544.9| Mus musculus chromosome 10, clone RP23-227F5, complete sequence Length = 177145 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 caattaaaaaatgaaataaa 313 |||||||||||||||||||| Sbjct: 82519 caattaaaaaatgaaataaa 82538
>ref|XM_724561.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00022) partial mRNA Length = 1854 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 aattaaaaaatgaaataaac 314 |||||||||||||||||||| Sbjct: 1118 aattaaaaaatgaaataaac 1137
>ref|XM_727762.1| Plasmodium chabaudi chabaudi hypothetical protein (PC300499.00.0) partial mRNA Length = 411 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 aattaaaaaatgaaataaac 314 |||||||||||||||||||| Sbjct: 173 aattaaaaaatgaaataaac 192
>gb|BC052581.1| Homo sapiens sperm specific antigen 2, mRNA (cDNA clone MGC:59972 IMAGE:6084501), complete cds Length = 4891 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 tcctcgtcctcctcctcgtc 151 |||||||||||||||||||| Sbjct: 287 tcctcgtcctcctcctcgtc 268
>gb|AC100263.9| Mus musculus chromosome 19, clone RP23-66K19, complete sequence Length = 188435 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cacgcacgcacacgcgcgcg 34 |||||||||||||||||||| Sbjct: 24219 cacgcacgcacacgcgcgcg 24238
>gb|AC146790.16| Medicago truncatula clone mth2-123b21, complete sequence Length = 114449 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 caattaaaaaatgaaataaa 313 |||||||||||||||||||| Sbjct: 35244 caattaaaaaatgaaataaa 35263 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,050,446 Number of Sequences: 3902068 Number of extensions: 6050446 Number of successful extensions: 201549 Number of sequences better than 10.0: 429 Number of HSP's better than 10.0 without gapping: 436 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 196527 Number of HSP's gapped (non-prelim): 5021 length of query: 563 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 540 effective length of database: 17,143,297,704 effective search space: 9257380760160 effective search space used: 9257380760160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
