ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd22e06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1273 bits (642), Expect = 0.0 Identities = 642/642 (100%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119678 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 119619 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119618 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 119559 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119558 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 119499 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119498 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 119439 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119438 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 119379 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119378 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 119319 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119318 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 119259 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119258 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 119199 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119198 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 119139 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119138 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 119079 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 119078 gataagcttcatcgtcgagagggaaacagcccggatcaccag 119037 Score = 1273 bits (642), Expect = 0.0 Identities = 642/642 (100%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95216 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 95275 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95276 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 95335 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95336 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 95395 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95396 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 95455 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95456 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 95515 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95516 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 95575 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95576 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 95635 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95636 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 95695 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95696 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 95755 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95756 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 95815 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 95816 gataagcttcatcgtcgagagggaaacagcccggatcaccag 95857
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118459 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 118400 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118399 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 118340 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118339 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 118280 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118279 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 118220 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 118219 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 118160 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118159 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 118100 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118099 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 118040 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118039 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 117980 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117979 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 117920 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117919 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 117860 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 117859 gataagcttcatcgtcgagagggaaacagcccggatcaccag 117818
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119543 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 119484 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119483 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 119424 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119423 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 119364 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119363 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 119304 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 119303 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 119244 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119243 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 119184 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119183 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 119124 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119123 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 119064 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119063 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 119004 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119003 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118944 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 118943 gataagcttcatcgtcgagagggaaacagcccggatcaccag 118902 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95613 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 95672 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95673 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 95732 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95733 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 95792 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95793 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 95852 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 95853 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 95912 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95913 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 95972 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95973 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 96032 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96033 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 96092 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96093 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 96152 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96153 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 96212 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 96213 gataagcttcatcgtcgagagggaaacagcccggatcaccag 96254
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119543 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 119484 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119483 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 119424 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119423 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 119364 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119363 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 119304 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 119303 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 119244 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119243 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 119184 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119183 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 119124 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119123 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 119064 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119063 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 119004 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119003 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118944 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 118943 gataagcttcatcgtcgagagggaaacagcccggatcaccag 118902 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95613 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 95672 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95673 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 95732 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95733 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 95792 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95793 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 95852 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 95853 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 95912 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95913 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 95972 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95973 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 96032 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96033 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 96092 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96093 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 96152 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96153 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 96212 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 96213 gataagcttcatcgtcgagagggaaacagcccggatcaccag 96254
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119492 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 119433 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119432 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 119373 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119372 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 119313 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119312 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 119253 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 119252 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 119193 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119192 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 119133 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119132 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 119073 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119072 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 119013 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119012 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 118953 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118952 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118893 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 118892 gataagcttcatcgtcgagagggaaacagcccggatcaccag 118851 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95558 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 95617 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95618 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 95677 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95678 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 95737 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95738 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 95797 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 95798 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 95857 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95858 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 95917 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95918 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 95977 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95978 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 96037 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96038 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 96097 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96098 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 96157 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 96158 gataagcttcatcgtcgagagggaaacagcccggatcaccag 96199
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508191 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 31508250 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508251 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 31508310 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508311 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 31508370 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508371 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 31508430 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 31508431 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 31508490 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508491 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 31508550 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508551 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 31508610 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508611 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 31508670 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508671 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 31508730 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508731 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 31508790 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508791 gataagcttcatcgtcgagagggaaacagcccggatcaccag 31508832 Score = 95.6 bits (48), Expect = 2e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 595 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 11513270 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 513 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 567 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 614 gtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccag 28582281 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 611 atcgtcgagagggaaacagcccggatcaccag 642 |||||||||||| ||||||||||||||||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccag 25722147
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84405 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 84346 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84345 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 84286 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84285 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 84226 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84225 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 84166 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 84165 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 84106 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84105 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 84046 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84045 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 83986 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83985 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 83926 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83925 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 83866 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83865 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 83806 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 83805 gataagcttcatcgtcgagagggaaacagcccggatcaccag 83764
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119512 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 119453 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119452 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 119393 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119392 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 119333 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119332 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 119273 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 119272 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 119213 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119212 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 119153 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119152 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 119093 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119092 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 119033 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119032 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 118973 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118972 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118913 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 118912 gataagcttcatcgtcgagagggaaacagcccggatcaccag 118871 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95606 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 95665 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95666 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 95725 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95726 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 95785 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95786 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 95845 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 95846 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 95905 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95906 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 95965 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95966 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 96025 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96026 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 96085 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96086 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 96145 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96146 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 96205 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 96206 gataagcttcatcgtcgagagggaaacagcccggatcaccag 96247
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58231 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 58172 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58171 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 58112 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58111 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 58052 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58051 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 57992 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 57991 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 57932 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57931 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 57872 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57871 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 57812 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57811 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 57752 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57751 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 57692 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57691 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 57632 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 57631 gataagcttcatcgtcgagagggaaacagcccggatcaccag 57590
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268540 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 9268599 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268600 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 9268659 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268660 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 9268719 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268720 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 9268779 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9268780 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 9268839 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268840 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 9268899 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268900 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 9268959 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268960 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 9269019 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269020 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 9269079 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269080 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 9269139 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269140 gataagcttcatcgtcgagagggaaacagcccggatcaccag 9269181 Score = 1257 bits (634), Expect = 0.0 Identities = 640/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228040 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 9228099 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228100 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 9228159 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228160 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 9228219 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228220 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 9228279 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9228280 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 9228339 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228340 cgaacctaggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 9228399 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228400 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 9228459 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228460 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 9228519 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228520 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 9228579 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228580 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 9228639 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228640 gataagcttcatcgtcgagagggaaacagcccggatcaccag 9228681 Score = 1257 bits (634), Expect = 0.0 Identities = 640/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056454 ggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 9056513 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056514 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 9056573 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056574 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 9056633 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056634 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 9056693 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9056694 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 9056753 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056754 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 9056813 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056814 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 9056873 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056874 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 9056933 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056934 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 9056993 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056994 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 9057053 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057054 gataagcttcatcgtcgagagggaaacagcccggatcaccag 9057095 Score = 1241 bits (626), Expect = 0.0 Identities = 639/642 (99%), Gaps = 1/642 (0%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164629 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 9164688 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164689 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 9164748 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164749 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 9164808 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164809 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 9164868 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9164869 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 9164928 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164929 cgaac-taggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 9164987 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164988 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 9165047 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165048 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 9165107 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165108 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 9165167 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165168 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 9165227 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165228 gataagcttcatcgtcgagagggaaacagcccggatcaccag 9165269 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 59 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 118 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 119 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 165 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938525 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 19938584 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938585 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 19938644 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938645 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 19938704 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938705 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 19938764 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 19938765 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 19938824 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938825 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 19938884 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938885 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 19938944 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938945 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 19939004 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939005 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 19939064 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939065 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 19939124 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939125 gataagcttcatcgtcgagagggaaacagcccggatcaccag 19939166 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276906 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 10276847 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276846 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 10276787 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276786 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 10276727 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276726 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 10276667 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10276666 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 10276607 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276606 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 10276547 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276546 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 10276487 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276486 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 10276427 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276426 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 10276367 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276366 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 10276307 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276306 gataagcttcatcgtcgagagggaaacagcccggatcaccag 10276265 Score = 1257 bits (634), Expect = 0.0 Identities = 640/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387392 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 10387451 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10387452 tgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtga 10387511 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387512 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 10387571 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387572 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 10387631 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10387632 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 10387691 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387692 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 10387751 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387752 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 10387811 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387812 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 10387871 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387872 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 10387931 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387932 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 10387991 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387992 gataagcttcatcgtcgagagggaaacagcccggatcaccag 10388033 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 77 agtaccgtgagggaaaggtgaaaagaacccc 107 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 54.0 bits (27), Expect = 6e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 520 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 579 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 580 tcggccagtgagacgatgggggataagcttcatcgtcgagag 621 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598707 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 31598766 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598767 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 31598826 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598827 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 31598886 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598887 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 31598946 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 31598947 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 31599006 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599007 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 31599066 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599067 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 31599126 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599127 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 31599186 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599187 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 31599246 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599247 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 31599306 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599307 gataagcttcatcgtcgagagggaaacagcccggatcaccag 31599348 Score = 95.6 bits (48), Expect = 2e-16 Identities = 48/48 (100%) Strand = Plus / Minus Query: 595 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 11510033 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 513 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 567 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 614 gtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccag 28673605 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 611 atcgtcgagagggaaacagcccggatcaccag 642 |||||||||||| ||||||||||||||||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccag 25813456
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526023 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 33526082 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526083 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 33526142 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526143 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 33526202 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526203 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 33526262 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 33526263 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 33526322 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526323 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 33526382 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526383 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 33526442 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526443 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 33526502 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526503 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 33526562 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526563 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 33526622 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526623 gataagcttcatcgtcgagagggaaacagcccggatcaccag 33526664 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 81 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 140 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 141 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 200 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 201 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 95 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 154 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 155 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 204 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 107 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 107 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 88 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 126 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 604 aagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||| ||||||||||||||||||||||| |||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccag 527789
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47518 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 47459 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47458 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 47399 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47398 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 47339 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47338 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 47279 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 47278 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 47219 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47218 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 47159 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47158 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 47099 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47098 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 47039 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47038 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 46979 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46978 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 46919 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 46918 gataagcttcatcgtcgagagggaaacagcccggatcaccag 46877
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71220 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 71279 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71280 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 71339 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71340 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 71399 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71400 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 71459 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 71460 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 71519 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71520 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 71579 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71580 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 71639 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71640 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 71699 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71700 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 71759 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71760 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 71819 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 71820 gataagcttcatcgtcgagagggaaacagcccggatcaccag 71861 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 107 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 107 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 243 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 303 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 363 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 423 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 424 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 483 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 543 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 603 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 604 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 663 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 664 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 723 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 783 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 gataagcttcatcgtcgagagggaaacagcccggatcaccag 825
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 451 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 511 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 571 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 572 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 631 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 632 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 691 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 692 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 751 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 752 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 811 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 871 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 872 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 931 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 932 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 991 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 992 gataagcttcatcgtcgagagggaaacagcccggatcaccag 1033
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 246 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 306 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 366 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 426 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 427 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 486 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 546 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 606 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 607 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 666 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 726 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 727 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 786 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 gataagcttcatcgtcgagagggaaacagcccggatcaccag 828
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 358 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 418 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 478 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 538 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 539 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 598 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 599 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 658 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 718 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 719 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 778 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 779 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 838 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 839 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 898 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 899 gataagcttcatcgtcgagagggaaacagcccggatcaccag 940
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 117 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 177 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 237 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 297 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 298 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 357 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 417 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 477 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 537 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 597 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 657 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 gataagcttcatcgtcgagagggaaacagcccggatcaccag 699
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 248 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 308 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 368 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 428 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 429 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 488 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 548 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 549 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 608 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 609 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 668 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 669 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 728 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 788 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 gataagcttcatcgtcgagagggaaacagcccggatcaccag 830
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 246 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 306 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 366 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 426 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 427 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 486 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 546 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 606 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 607 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 666 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 726 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 727 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 786 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 gataagcttcatcgtcgagagggaaacagcccggatcaccag 828
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 248 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 308 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 368 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 428 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 429 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 488 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 548 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 549 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 608 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 609 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 668 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 669 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 728 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 788 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 gataagcttcatcgtcgagagggaaacagcccggatcaccag 830
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949801 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 19949860 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949861 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 19949920 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949921 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 19949980 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949981 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 19950040 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 19950041 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 19950100 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950101 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 19950160 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950161 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 19950220 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950221 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 19950280 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950281 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 19950340 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950341 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 19950400 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950401 gataagcttcatcgtcgagagggaaacagcccggatcaccag 19950442 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282945 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 10282886 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282885 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 10282826 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282825 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 10282766 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282765 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 10282706 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10282705 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 10282646 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282645 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 10282586 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282585 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 10282526 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282525 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 10282466 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282465 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 10282406 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282405 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 10282346 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282345 gataagcttcatcgtcgagagggaaacagcccggatcaccag 10282304 Score = 1257 bits (634), Expect = 0.0 Identities = 640/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393431 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 10393490 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 10393491 tgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtga 10393550 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393551 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 10393610 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393611 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 10393670 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10393671 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 10393730 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393731 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 10393790 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393791 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 10393850 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393851 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 10393910 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393911 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 10393970 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393971 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 10394030 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394031 gataagcttcatcgtcgagagggaaacagcccggatcaccag 10394072 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 107 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 54.0 bits (27), Expect = 6e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 520 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 579 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 580 tcggccagtgagacgatgggggataagcttcatcgtcgagag 621 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119486 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 119427 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119426 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 119367 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119366 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 119307 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119306 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 119247 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 119246 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 119187 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119186 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 119127 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119126 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 119067 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119066 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 119007 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119006 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 118947 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118946 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118887 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 118886 gataagcttcatcgtcgagagggaaacagcccggatcaccag 118845 Score = 1265 bits (638), Expect = 0.0 Identities = 641/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95553 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 95612 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95613 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 95672 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95673 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 95732 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95733 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 95792 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 95793 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 95852 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95853 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 95912 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95913 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 95972 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95973 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 96032 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96033 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 96092 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96093 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 96152 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 96153 gataagcttcatcgtcgagagggaaacagcccggatcaccag 96194
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1257 bits (634), Expect = 0.0 Identities = 640/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14380 ggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 14439 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14440 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 14499 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14500 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 14559 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14560 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 14619 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 14620 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 14679 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14680 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 14739 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14740 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 14799 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14800 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 14859 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14860 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 14919 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14920 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 14979 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 14980 gataagcttcatcgtcgagagggaaacagcccggatcaccag 15021 Score = 1241 bits (626), Expect = 0.0 Identities = 639/642 (99%), Gaps = 1/642 (0%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122655 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 122714 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122715 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 122774 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122775 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 122834 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122835 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 122894 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 122895 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 122954 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122955 cgaac-taggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 123013 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123014 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 123073 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123074 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 123133 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123134 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 123193 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123194 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 123253 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 123254 gataagcttcatcgtcgagagggaaacagcccggatcaccag 123295
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1257 bits (634), Expect = 0.0 Identities = 640/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141188 ggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 141247 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141248 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 141307 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141308 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 141367 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141368 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 141427 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141428 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 141487 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141488 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 141547 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141548 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 141607 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141608 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 141667 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141668 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 141727 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141728 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 141787 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141788 gataagcttcatcgtcgagagggaaacagcccggatcaccag 141829
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1257 bits (634), Expect = 0.0 Identities = 640/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93784 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 93843 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 93844 tgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtga 93903 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93904 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 93963 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93964 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 94023 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 94024 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 94083 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94084 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 94143 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94144 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 94203 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94204 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 94263 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94264 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 94323 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94324 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 94383 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 94384 gataagcttcatcgtcgagagggaaacagcccggatcaccag 94425
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1257 bits (634), Expect = 0.0 Identities = 640/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20615 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 20674 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20675 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 20734 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20735 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 20794 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 20795 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatgga 20854 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 20855 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 20914 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20915 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 20974 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20975 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 21034 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21035 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 21094 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21095 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 21154 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21155 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 21214 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 21215 gataagcttcatcgtcgagagggaaacagcccggatcaccag 21256 Score = 1219 bits (615), Expect = 0.0 Identities = 637/643 (99%), Gaps = 1/643 (0%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44503 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 44444 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44443 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 44384 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44383 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 44324 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 44323 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatgga 44264 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 |||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 44263 accctccggagccgtagtgaaagcgagtcttcatagggcgattgtcactgcttatggacc 44204 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44203 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 44144 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg-aaatgccactc 419 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 44143 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgtaaatgccactc 44084 Query: 420 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacat 479 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44083 gaacccagagctagttggttctccccgaaatgcgttgaggcgcagcagttgactggacat 44024 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44023 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 43964 Query: 540 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43963 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 43904 Query: 600 ggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43903 ggataagcttcatcgtcgagagggaaacagcccggatcaccag 43861
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1257 bits (634), Expect = 0.0 Identities = 640/642 (99%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1132 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 1073 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1072 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 1013 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1012 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 953 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 952 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatgga 893 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 892 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 833 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 832 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 773 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 713 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 653 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 652 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 593 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 592 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 533 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 532 gataagcttcatcgtcgagagggaaacagcccggatcaccag 491
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1257 bits (634), Expect = 0.0 Identities = 640/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27848 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 27907 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 27908 tgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtga 27967 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27968 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 28027 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28028 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 28087 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 28088 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 28147 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28148 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 28207 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28208 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 28267 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28268 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 28327 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28328 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 28387 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28388 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 28447 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 28448 gataagcttcatcgtcgagagggaaacagcccggatcaccag 28489
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1257 bits (634), Expect = 0.0 Identities = 640/642 (99%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123342 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 123283 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123282 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 123223 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123222 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 123163 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 123162 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatgga 123103 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 123102 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 123043 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123042 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 122983 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122982 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 122923 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122922 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 122863 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122862 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 122803 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122802 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 122743 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 122742 gataagcttcatcgtcgagagggaaacagcccggatcaccag 122701 Score = 1257 bits (634), Expect = 0.0 Identities = 640/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99495 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 99554 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99555 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 99614 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99615 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 99674 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 99675 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatgga 99734 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 99735 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 99794 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99795 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 99854 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99855 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 99914 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99915 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 99974 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99975 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 100034 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100035 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 100094 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 100095 gataagcttcatcgtcgagagggaaacagcccggatcaccag 100136
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1257 bits (634), Expect = 0.0 Identities = 640/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 245 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 305 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 306 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 365 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 425 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 426 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 485 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 486 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaaccaagcagaggtcc 545 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 605 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 606 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 665 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 666 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 725 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 726 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 785 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 786 gataagcttcatcgtcgagagggaaacagcccggatcaccag 827
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1257 bits (634), Expect = 0.0 Identities = 640/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 67 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 127 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 aataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 187 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 247 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 248 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 307 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 367 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 427 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 487 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 488 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 547 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 548 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 607 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 608 gataagcttcatcgtcgagagggaaacagcccggatcaccag 649
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1257 bits (634), Expect = 0.0 Identities = 640/642 (99%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124059 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 124000 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123999 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 123940 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123939 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 123880 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 123879 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatgga 123820 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 123819 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 123760 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123759 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 123700 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123699 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 123640 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123639 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 123580 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123579 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 123520 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123519 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 123460 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 123459 gataagcttcatcgtcgagagggaaacagcccggatcaccag 123418 Score = 1257 bits (634), Expect = 0.0 Identities = 640/642 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100172 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 100231 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100232 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 100291 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100292 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 100351 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 100352 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatgga 100411 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 100412 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 100471 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100472 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 100531 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100532 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 100591 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100592 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 100651 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100652 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 100711 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100712 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 100771 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 100772 gataagcttcatcgtcgagagggaaacagcccggatcaccag 100813
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1249 bits (630), Expect = 0.0 Identities = 639/642 (99%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241741 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 9241682 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241681 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 9241622 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241621 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 9241562 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 9241561 gcgtgcctgttgaagaatgagctggcgactcataggcagtggcttggttaagggaacgga 9241502 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9241501 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 9241442 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241441 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 9241382 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241381 gaaccgtctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 9241322 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241321 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 9241262 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241261 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 9241202 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241201 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 9241142 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241141 gataagcttcatcgtcgagagggaaacagcccggatcaccag 9241100 Score = 182 bits (92), Expect = 9e-43 Identities = 132/144 (91%), Gaps = 1/144 (0%) Strand = Plus / Minus Query: 485 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 544 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 545 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 604 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 605 agcttcatcgtcgagagggaaaca 628 ||||||||||||||||| |||||| Sbjct: 3580430 agcttcatcgtcgagagagaaaca 3580407
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1249 bits (630), Expect = 0.0 Identities = 639/642 (99%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52954 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 52895 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52894 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 52835 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52834 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 52775 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 52774 gcgtgcctgttgaagaatgagctggcgactcataggcagtggcttggttaagggaacgga 52715 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 52714 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 52655 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52654 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 52595 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52594 gaaccgtctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 52535 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52534 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 52475 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52474 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 52415 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52414 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 52355 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 52354 gataagcttcatcgtcgagagggaaacagcccggatcaccag 52313
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1247 bits (629), Expect = 0.0 Identities = 632/633 (99%) Strand = Plus / Plus Query: 10 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 69 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 70 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 130 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 190 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 240 Query: 250 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 309 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 241 agccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgg 300 Query: 310 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 360 Query: 370 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 420 Query: 430 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 480 Query: 490 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 540 Query: 550 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 600 Query: 610 catcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||||||| Sbjct: 601 catcgtcgagagggaaacagcccggatcaccag 633
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1241 bits (626), Expect = 0.0 Identities = 639/642 (99%), Gaps = 1/642 (0%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123282 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 123223 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123222 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 123163 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123162 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 123103 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 123102 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatgga 123043 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 123042 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 122983 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122982 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 122923 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122922 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 122863 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122862 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 122803 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 122802 taggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactc 122744 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122743 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 122684 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 122683 gataagcttcatcgtcgagagggaaacagcccggatcaccag 122642 Score = 1241 bits (626), Expect = 0.0 Identities = 639/642 (99%), Gaps = 1/642 (0%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99455 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 99514 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99515 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 99574 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99575 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 99634 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 99635 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatgga 99694 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 99695 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 99754 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99755 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 99814 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99815 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 99874 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99875 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 99934 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99935 taggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactc 99993 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99994 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 100053 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 100054 gataagcttcatcgtcgagagggaaacagcccggatcaccag 100095
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1241 bits (626), Expect = 0.0 Identities = 639/642 (99%), Gaps = 1/642 (0%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5808 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 5867 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5868 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 5927 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5928 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 5987 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 5988 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatgga 6047 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 6048 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 6107 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6108 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 6167 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6168 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 6227 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6228 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 6287 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 6288 taggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactc 6346 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6347 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 6406 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 6407 gataagcttcatcgtcgagagggaaacagcccggatcaccag 6448
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1241 bits (626), Expect = 0.0 Identities = 639/642 (99%), Gaps = 1/642 (0%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 455 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 456 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 515 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 516 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 575 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 576 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatgga 635 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 636 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 695 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 696 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 755 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 815 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 875 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 876 taggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactc 934 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 935 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 994 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 995 gataagcttcatcgtcgagagggaaacagcccggatcaccag 1036
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 1176 bits (593), Expect = 0.0 Identities = 629/640 (98%), Gaps = 2/640 (0%) Strand = Plus / Minus Query: 5 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 65 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 125 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 185 gcctgttgaagaatgagccggcgactcataggcagtg--gcttggttaagggaacggaac 242 ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 122581 Query: 243 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 302 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122580 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 122521 Query: 303 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 122520 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcga 122461 Query: 363 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122460 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 122401 Query: 423 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122400 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 122341 Query: 483 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 542 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 122340 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctg 122281 Query: 543 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 602 ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| Sbjct: 122280 aatactagatatgacccaaaaataataggattcaaagtcggccagtgagacgatggggga 122221 Query: 603 taagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||| |||||||||| Sbjct: 122220 taagcttcatcgtcgagagggaaacagcctggatcaccag 122181
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 1176 bits (593), Expect = 0.0 Identities = 629/640 (98%), Gaps = 2/640 (0%) Strand = Plus / Minus Query: 5 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 64 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 65 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 125 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 185 gcctgttgaagaatgagccggcgactcataggcagtg--gcttggttaagggaacggaac 242 ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 12825122 Query: 243 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 302 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12825121 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 12825062 Query: 303 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 12825061 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcga 12825002 Query: 363 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825001 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 12824942 Query: 423 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824941 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 12824882 Query: 483 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 542 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 12824881 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctg 12824822 Query: 543 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 602 ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| Sbjct: 12824821 aatactagatatgacccaaaaataataggattcaaagtcggccagtgagacgatggggga 12824762 Query: 603 taagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||| |||||||||| Sbjct: 12824761 taagcttcatcgtcgagagggaaacagcctggatcaccag 12824722
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1152 bits (581), Expect = 0.0 Identities = 587/589 (99%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 589 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 530 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 529 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 470 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 410 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 409 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatgga 350 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 349 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 290 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 230 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 170 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 110 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 50 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 589 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 1
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 1070 bits (540), Expect = 0.0 Identities = 617/642 (96%), Gaps = 8/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 141715 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 141656 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 141655 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 141596 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||| Sbjct: 141595 aatagaacatgaaaccgtg---agctcccaagcagtgggaggagaatttgatctctgacc 141539 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141538 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 141482 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 141481 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 141424 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 141423 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 141364 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141363 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 141304 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141303 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 141244 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 141243 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 141184 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 141183 tgaatactagatatgaccccaaaataacaggggtaaaggtcggccagtgagacgatgggg 141124 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141123 gataagcttcatcgtcgagagggaaacagcccggatcaccag 141082 Score = 1070 bits (540), Expect = 0.0 Identities = 617/642 (96%), Gaps = 8/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 111942 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 112001 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 112002 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 112061 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||| Sbjct: 112062 aatagaacatgaaaccgtg---agctcccaagcagtgggaggagaatttgatctctgacc 112118 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112119 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 112175 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 112176 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 112233 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 112234 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 112293 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112294 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 112353 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112354 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 112413 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 112414 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 112473 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 112474 tgaatactagatatgaccccaaaataacaggggtaaaggtcggccagtgagacgatgggg 112533 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 112534 gataagcttcatcgtcgagagggaaacagcccggatcaccag 112575
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 1070 bits (540), Expect = 0.0 Identities = 618/642 (96%), Gaps = 9/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133830 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 133771 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 133770 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 133711 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||||| Sbjct: 133710 aatagaacatgaaaccgta---agctcccaagcagtgggaggagaatgtgatctctgacc 133654 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133653 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 133597 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 133596 --ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 133539 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 133538 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 133479 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133478 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 133419 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 133418 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatc 133359 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 133358 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 133299 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 133298 tgaatactagatatgacccaaaaatcaca-gggtcaaggtcggccagtgagacgatgggg 133240 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 133239 gataagcttcatcgtcgagagggaaacagcccggatcaccag 133198 Score = 1070 bits (540), Expect = 0.0 Identities = 618/642 (96%), Gaps = 9/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104141 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 104200 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 104201 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 104260 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||||| Sbjct: 104261 aatagaacatgaaaccgta---agctcccaagcagtgggaggagaatgtgatctctgacc 104317 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104318 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 104374 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104375 --ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 104432 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 104433 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 104492 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104493 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 104552 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 104553 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacatc 104612 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 104613 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 104672 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 104673 tgaatactagatatgacccaaaaatcaca-gggtcaaggtcggccagtgagacgatgggg 104731 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104732 gataagcttcatcgtcgagagggaaacagcccggatcaccag 104773
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 1053 bits (531), Expect = 0.0 Identities = 615/642 (95%), Gaps = 12/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127471 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 127412 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 127411 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 127352 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| |||||||||| |||||||||||||||||||| ||| ||||||||||||| Sbjct: 127351 aatagaacatgaaaccgtg---agctcccaagcagtgggaggagaatgtgatctctgacc 127295 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127294 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaat--- 127238 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 127237 --ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 127180 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 127179 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 127120 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127119 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 127060 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127059 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 127000 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 126999 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 126940 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 126939 tgaatactagatatgacccca----aacaggggtcaaggtcggccagtgagacgatgggg 126884 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 126883 gataagcttcatcgtcgagagggaaacagcccggatcaccag 126842 Score = 1053 bits (531), Expect = 0.0 Identities = 615/642 (95%), Gaps = 12/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107451 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 107510 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 107511 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 107570 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| |||||||||| |||||||||||||||||||| ||| ||||||||||||| Sbjct: 107571 aatagaacatgaaaccgtg---agctcccaagcagtgggaggagaatgtgatctctgacc 107627 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107628 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaat--- 107684 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 107685 --ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 107742 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 107743 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 107802 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107803 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 107862 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107863 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 107922 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107923 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 107982 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 107983 tgaatactagatatgacccca----aacaggggtcaaggtcggccagtgagacgatgggg 108038 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 108039 gataagcttcatcgtcgagagggaaacagcccggatcaccag 108080
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 1049 bits (529), Expect = 0.0 Identities = 618/647 (95%), Gaps = 13/647 (2%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139193 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 139134 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 139133 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 139074 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||| Sbjct: 139073 aatagaacatgaaaccgtg---agctcccaagcagtgggaggagaatttgatctctgacc 139017 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139016 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 138960 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 138959 --ccaccggagccatagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 138902 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 138901 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 138842 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138841 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 138782 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138781 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 138722 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 138721 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 138662 Query: 541 tgaatactagatatgaccc-----aaaaataacaggggtcaaggtcggccagtgagacga 595 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 138661 tgaatactagatatgaccccaaaacaaaataacaggggtcaaggtcggccagtgagacga 138602 Query: 596 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138601 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 138555 Score = 1049 bits (529), Expect = 0.0 Identities = 618/647 (95%), Gaps = 13/647 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110752 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 110811 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 110812 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 110871 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||| Sbjct: 110872 aatagaacatgaaaccgtg---agctcccaagcagtgggaggagaatttgatctctgacc 110928 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110929 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 110985 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 110986 --ccaccggagccatagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 111043 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 111044 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 111103 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111104 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 111163 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111164 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 111223 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 111224 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 111283 Query: 541 tgaatactagatatgaccc-----aaaaataacaggggtcaaggtcggccagtgagacga 595 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 111284 tgaatactagatatgaccccaaaacaaaataacaggggtcaaggtcggccagtgagacga 111343 Query: 596 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 111390
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135906 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135847 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135846 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135787 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 135786 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 135732 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135731 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 135675 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135674 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 135617 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 135616 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 135557 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135556 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 135497 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135496 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 135437 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 135436 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 135377 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 135376 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 135317 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135316 gataagcttcatcgtcgagagggaaacagcccggatcaccag 135275 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106724 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 106783 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 106784 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106843 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 106844 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 106898 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106899 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 106955 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106956 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 107013 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 107014 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 107073 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107074 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 107133 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107134 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 107193 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107194 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 107253 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 107254 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 107313 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107314 gataagcttcatcgtcgagagggaaacagcccggatcaccag 107355
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136544 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 136485 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 136484 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 136425 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 136424 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 136370 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136369 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 136313 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 136312 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 136255 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 136254 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 136195 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136194 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 136135 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136134 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 136075 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 136074 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 136015 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 136014 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 135955 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135954 gataagcttcatcgtcgagagggaaacagcccggatcaccag 135913 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107013 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 107072 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 107073 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 107132 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 107133 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 107187 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107188 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 107244 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 107245 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 107302 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 107303 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 107362 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107363 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 107422 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107423 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 107482 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107483 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 107542 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 107543 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 107602 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107603 gataagcttcatcgtcgagagggaaacagcccggatcaccag 107644
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1918 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 1977 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 1978 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 2037 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 2038 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 2092 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2093 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 2149 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 2150 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 2207 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 2208 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 2267 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2268 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 2327 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2328 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 2387 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 2388 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 2447 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 2448 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 2507 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2508 gataagcttcatcgtcgagagggaaacagcccggatcaccag 2549
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135152 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135093 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135092 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135033 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 135032 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 134978 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134977 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 134921 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134920 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 134863 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 134862 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 134803 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134802 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 134743 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134742 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 134683 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134682 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 134623 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 134622 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 134563 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134562 gataagcttcatcgtcgagagggaaacagcccggatcaccag 134521 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105884 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 105943 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 105944 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106003 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 106004 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 106058 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106059 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 106115 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106116 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106173 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 106174 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 106233 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106234 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 106293 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106294 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 106353 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 106354 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 106413 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 106414 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 106473 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106474 gataagcttcatcgtcgagagggaaacagcccggatcaccag 106515
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136198 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 136139 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 136138 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 136079 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 136078 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 136024 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136023 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 135967 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135966 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 135909 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 135908 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 135849 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135848 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 135789 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135788 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 135729 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 135728 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 135669 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 135668 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 135609 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135608 gataagcttcatcgtcgagagggaaacagcccggatcaccag 135567 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106227 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 106286 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 106287 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106346 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 106347 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 106401 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106402 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 106458 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106459 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106516 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 106517 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 106576 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106577 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 106636 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106637 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 106696 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 106697 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 106756 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 106757 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 106816 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106817 gataagcttcatcgtcgagagggaaacagcccggatcaccag 106858
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135287 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135228 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135227 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135168 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 135167 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 135113 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135112 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 135056 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135055 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 134998 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 134997 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 134938 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134937 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 134878 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134877 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 134818 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134817 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 134758 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 134757 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 134698 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134697 gataagcttcatcgtcgagagggaaacagcccggatcaccag 134656 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106056 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 106115 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 106116 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106175 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 106176 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 106230 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106231 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 106287 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106288 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106345 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 106346 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 106405 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106406 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 106465 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106466 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 106525 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 106526 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 106585 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 106586 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 106645 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106646 gataagcttcatcgtcgagagggaaacagcccggatcaccag 106687
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135285 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135226 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135225 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135166 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 135165 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 135111 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135110 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 135054 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135053 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 134996 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 134995 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 134936 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134935 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 134876 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134875 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 134816 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134815 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 134756 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 134755 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 134696 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134695 gataagcttcatcgtcgagagggaaacagcccggatcaccag 134654 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106053 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 106112 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 106113 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106172 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 106173 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 106227 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106228 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 106284 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106285 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106342 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 106343 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 106402 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106403 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 106462 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106463 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 106522 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 106523 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 106582 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 106583 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 106642 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106643 gataagcttcatcgtcgagagggaaacagcccggatcaccag 106684
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135197 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135138 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135137 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135078 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 135077 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 135023 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135022 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 134966 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134965 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 134908 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 134907 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 134848 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134847 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 134788 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134787 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 134728 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134727 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 134668 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 134667 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 134608 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134607 gataagcttcatcgtcgagagggaaacagcccggatcaccag 134566 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105931 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 105990 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 105991 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106050 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 106051 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 106105 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106106 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 106162 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106163 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106220 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 106221 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 106280 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106281 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 106340 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106341 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 106400 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 106401 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 106460 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 106461 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 106520 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106521 gataagcttcatcgtcgagagggaaacagcccggatcaccag 106562
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135904 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135845 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135844 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135785 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 135784 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 135730 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135729 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 135673 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135672 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 135615 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 135614 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 135555 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135554 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 135495 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135494 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 135435 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 135434 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 135375 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 135374 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 135315 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135314 gataagcttcatcgtcgagagggaaacagcccggatcaccag 135273 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106722 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 106781 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 106782 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106841 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 106842 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 106896 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106897 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 106953 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106954 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 107011 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 107012 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 107071 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107072 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 107131 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107132 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 107191 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107192 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 107251 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 107252 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 107311 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107312 gataagcttcatcgtcgagagggaaacagcccggatcaccag 107353
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135635 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135576 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135575 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135516 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 135515 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 135461 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135460 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 135404 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 135403 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 135346 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 135345 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 135286 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135285 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 135226 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135225 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 135166 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 135165 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 135106 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 135105 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 135046 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135045 gataagcttcatcgtcgagagggaaacagcccggatcaccag 135004 Score = 1025 bits (517), Expect = 0.0 Identities = 612/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106503 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 106562 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 106563 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106622 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 106623 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 106677 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106678 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 106734 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106735 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106792 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 106793 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 106852 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106853 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 106912 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106913 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 106972 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 106973 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 107032 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 107033 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 107092 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107093 gataagcttcatcgtcgagagggaaacagcccggatcaccag 107134
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 1023 bits (516), Expect = 0.0 Identities = 612/642 (95%), Gaps = 9/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132382 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 132323 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 132322 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 132263 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | | | |||||||| Sbjct: 132262 aatagaacatgaaaccgta---agctcccaagcagtgggaggagcccgggg-ctctgacc 132207 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132206 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 132150 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 132149 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 132092 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 132091 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 132032 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132031 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 131972 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131971 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 131912 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 131911 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 131852 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 131851 tgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggg 131792 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131791 gataagcttcatcgtcgagagggaaacagcccggatcaccag 131750 Score = 1023 bits (516), Expect = 0.0 Identities = 612/642 (95%), Gaps = 9/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104496 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 104555 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 104556 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 104615 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | | | |||||||| Sbjct: 104616 aatagaacatgaaaccgta---agctcccaagcagtgggaggagcccgggg-ctctgacc 104671 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104672 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 104728 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 104729 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 104786 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 104787 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 104846 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104847 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 104906 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104907 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 104966 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 104967 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 105026 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105027 tgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggg 105086 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105087 gataagcttcatcgtcgagagggaaacagcccggatcaccag 105128
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 1023 bits (516), Expect = 0.0 Identities = 612/642 (95%), Gaps = 9/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131274 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 131215 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 131214 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 131155 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | | | |||||||| Sbjct: 131154 aatagaacatgaaaccgta---agctcccaagcagtgggaggagcccgggg-ctctgacc 131099 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131098 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 131042 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 131041 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 130984 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 130983 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 130924 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130923 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 130864 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130863 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 130804 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 130803 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 130744 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 130743 tgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggg 130684 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 130683 gataagcttcatcgtcgagagggaaacagcccggatcaccag 130642 Score = 1023 bits (516), Expect = 0.0 Identities = 612/642 (95%), Gaps = 9/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103361 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 103420 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 103421 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 103480 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | | | |||||||| Sbjct: 103481 aatagaacatgaaaccgta---agctcccaagcagtgggaggagcccgggg-ctctgacc 103536 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103537 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 103593 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 103594 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 103651 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 103652 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 103711 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103712 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 103771 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103772 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 103831 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 103832 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 103891 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 103892 tgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggg 103951 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 103952 gataagcttcatcgtcgagagggaaacagcccggatcaccag 103993
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 1023 bits (516), Expect = 0.0 Identities = 612/642 (95%), Gaps = 9/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132375 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 132316 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 132315 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 132256 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | | | |||||||| Sbjct: 132255 aatagaacatgaaaccgta---agctcccaagcagtgggaggagcccgggg-ctctgacc 132200 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132199 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 132143 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 132142 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 132085 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 132084 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 132025 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132024 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 131965 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131964 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 131905 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 131904 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 131845 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 131844 tgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggg 131785 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131784 gataagcttcatcgtcgagagggaaacagcccggatcaccag 131743 Score = 1023 bits (516), Expect = 0.0 Identities = 612/642 (95%), Gaps = 9/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104494 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 104553 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 104554 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 104613 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | | | |||||||| Sbjct: 104614 aatagaacatgaaaccgta---agctcccaagcagtgggaggagcccgggg-ctctgacc 104669 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104670 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 104726 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 104727 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 104784 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 104785 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 104844 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104845 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 104904 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104905 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 104964 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 104965 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 105024 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105025 tgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggg 105084 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105085 gataagcttcatcgtcgagagggaaacagcccggatcaccag 105126
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 1015 bits (512), Expect = 0.0 Identities = 611/642 (95%), Gaps = 9/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131398 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 131339 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 131338 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 131279 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| ||||| |||||||||||||||| | || | |||||| Sbjct: 131278 aatagaacatgaaaccgta---agctctcaagcagtgggagggggaccagacc-ctgacc 131223 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131222 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 131166 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 131165 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 131108 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 131107 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 131048 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131047 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 130988 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130987 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 130928 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 130927 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 130868 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 130867 tgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggg 130808 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 130807 gataagcttcatcgtcgagagggaaacagcccggatcaccag 130766 Score = 1015 bits (512), Expect = 0.0 Identities = 611/642 (95%), Gaps = 9/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102047 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 102106 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 102107 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 102166 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| ||||| |||||||||||||||| | || | |||||| Sbjct: 102167 aatagaacatgaaaccgta---agctctcaagcagtgggagggggaccagacc-ctgacc 102222 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102223 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 102279 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 102280 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 102337 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 102338 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 102397 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102398 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 102457 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102458 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 102517 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 102518 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 102577 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 102578 tgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggg 102637 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 102638 gataagcttcatcgtcgagagggaaacagcccggatcaccag 102679
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 1015 bits (512), Expect = 0.0 Identities = 611/642 (95%), Gaps = 9/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 453 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| |||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 454 tgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccaccggggagtga 513 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | | | |||||||| Sbjct: 514 aatagaacatgaaaccgta---agctcccaagcagtgggaggagcctgggg-ctctgacc 569 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 626 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 627 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 684 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 685 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 744 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 804 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 805 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 864 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 865 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 924 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 925 tgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggg 984 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 985 gataagcttcatcgtcgagagggaaacagcccggatcaccag 1026
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 1009 bits (509), Expect = 0.0 Identities = 609/642 (94%), Gaps = 19/642 (2%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134588 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 134529 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 134528 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 134469 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| |||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct: 134468 aatagaacatgaaaccgtg---agctcccaagcagtgggaggagaaa----tctctgacc 134416 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134415 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 134359 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134358 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 134301 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 134300 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 134241 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134240 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 134181 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134180 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 134121 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134120 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 134061 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||| || ||| |||||||||||||||||||||||||||||| Sbjct: 134060 tgaatactagatatgatcccaaa-------gggtcaaggtcggccagtgagacgatgggg 134008 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134007 gataagcttcatcgtcgagagggaaacagcccggatcaccag 133966 Score = 1009 bits (509), Expect = 0.0 Identities = 609/642 (94%), Gaps = 19/642 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105694 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 105753 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 105754 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 105813 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| |||||||||| |||||||||||||||||||| |||| ||||||||| Sbjct: 105814 aatagaacatgaaaccgtg---agctcccaagcagtgggaggagaaa----tctctgacc 105866 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105867 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 105923 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 105924 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 105981 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 105982 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 106041 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106042 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 106101 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106102 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 106161 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 106162 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 106221 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||| || ||| |||||||||||||||||||||||||||||| Sbjct: 106222 tgaatactagatatgatcccaaa-------gggtcaaggtcggccagtgagacgatgggg 106274 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106275 gataagcttcatcgtcgagagggaaacagcccggatcaccag 106316
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 1009 bits (509), Expect = 0.0 Identities = 610/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 142485 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 142426 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 142425 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 142366 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| ||||||||||||||||||| | || | |||||||| Sbjct: 142365 aatagaacatgaaaccgtag---gctcccaagcagtgggaggagccaggg--ctctgacc 142311 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142310 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 142254 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 142253 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 142196 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 142195 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcggaggtcc 142136 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142135 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 142076 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142075 aacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgactggacatc 142016 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 142015 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 141956 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 141955 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 141896 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 141895 gataagcttgatcgtcgagagggaaacagcccggatcaccag 141854 Score = 1009 bits (509), Expect = 0.0 Identities = 610/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 110843 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 110902 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 110903 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 110962 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| ||||||||||||||||||| | || | |||||||| Sbjct: 110963 aatagaacatgaaaccgtag---gctcccaagcagtgggaggagccaggg--ctctgacc 111017 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111018 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 111074 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 111075 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 111132 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 111133 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcggaggtcc 111192 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111193 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 111252 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111253 aacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgactggacatc 111312 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 111313 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 111372 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 111373 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 111432 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 111433 gataagcttgatcgtcgagagggaaacagcccggatcaccag 111474
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 1009 bits (509), Expect = 0.0 Identities = 610/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135164 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135105 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135104 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135045 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 135044 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 134990 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 134989 gcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaagggaac--- 134933 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 134932 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 134875 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 134874 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 134815 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134814 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 134755 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134754 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 134695 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134694 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 134635 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 134634 tgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 134575 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134574 gataagcttcatcgtcgagagggaaacagcccggatcaccag 134533 Score = 1009 bits (509), Expect = 0.0 Identities = 610/642 (95%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105898 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 105957 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 105958 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106017 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 106018 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 106072 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 106073 gcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaagggaac--- 106129 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 106130 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 106187 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 106188 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 106247 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106248 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 106307 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106308 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 106367 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 106368 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 106427 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 106428 tgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 106487 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106488 gataagcttcatcgtcgagagggaaacagcccggatcaccag 106529
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 1003 bits (506), Expect = 0.0 Identities = 611/643 (95%), Gaps = 11/643 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139111 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 139052 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| Sbjct: 139051 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtga 138992 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa-agtgatctctgac 179 |||||||| ||||||||| |||||||||||||||||||| | || | ||||||| Sbjct: 138991 aatagaacatgaaaccgta---agctcccaagcagtgggaggagcccaggg--ctctgac 138937 Query: 180 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138936 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-- 138879 Query: 240 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 299 ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 138878 ---ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggac 138822 Query: 300 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 359 ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 138821 ccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtc 138762 Query: 360 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138761 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 138702 Query: 420 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacat 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138701 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacat 138642 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 138641 ctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaact 138582 Query: 540 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 599 ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct: 138581 ctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgagacgatggg 138522 Query: 600 ggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138521 ggataagcttcatcgtcgagagggaaacagcccggatcaccag 138479 Score = 1003 bits (506), Expect = 0.0 Identities = 611/643 (95%), Gaps = 11/643 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109986 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 110045 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| Sbjct: 110046 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtga 110105 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa-agtgatctctgac 179 |||||||| ||||||||| |||||||||||||||||||| | || | ||||||| Sbjct: 110106 aatagaacatgaaaccgta---agctcccaagcagtgggaggagcccaggg--ctctgac 110160 Query: 180 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110161 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-- 110218 Query: 240 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 299 ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 110219 ---ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggac 110275 Query: 300 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 359 ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 110276 ccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtc 110335 Query: 360 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110336 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 110395 Query: 420 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacat 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110396 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacat 110455 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 110456 ctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaact 110515 Query: 540 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 599 ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct: 110516 ctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgagacgatggg 110575 Query: 600 ggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110576 ggataagcttcatcgtcgagagggaaacagcccggatcaccag 110618
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 999 bits (504), Expect = 0.0 Identities = 609/642 (94%), Gaps = 9/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106398 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 106457 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| |||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 106458 tgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106517 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||| ||||||||||||||| || || |||||||| Sbjct: 106518 aatagaacatgaaaccgta---agcttccaagcagtgggaggagacgagga-ctctgacc 106573 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106574 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 106630 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| || |||| |||||||||||||||||||| Sbjct: 106631 --ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacc 106688 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 106689 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 106748 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106749 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 106808 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106809 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 106868 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 106869 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 106928 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 106929 tgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggg 106988 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106989 gataagcttcatcgtcgagagggaaacagcccggatcaccag 107030 Score = 985 bits (497), Expect = 0.0 Identities = 609/643 (94%), Gaps = 10/643 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagc-aaggaccaccttgcaaggctaaatactcctgg 59 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135509 ggcacgtggaatcccgtgtgaatcagccaaggaccaccttgcaaggctaaatactcctgg 135450 Query: 60 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 119 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||| Sbjct: 135449 gtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtg 135390 Query: 120 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 179 ||||||||| ||||||||| |||| ||||||||||||||| || || ||||||| Sbjct: 135389 aaatagaacatgaaaccgta---agcttccaagcagtgggaggagacgagga-ctctgac 135334 Query: 180 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135333 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-- 135276 Query: 240 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 299 ||||||||||||||||||||||||||||| || |||| ||||||||||||||||||| Sbjct: 135275 ---ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggac 135219 Query: 300 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 359 ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 135218 ccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtc 135159 Query: 360 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135158 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 135099 Query: 420 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacat 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135098 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacat 135039 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 135038 ctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaact 134979 Query: 540 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 599 ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 134978 ctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatggg 134919 Query: 600 ggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134918 ggataagcttcatcgtcgagagggaaacagcccggatcaccag 134876
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 999 bits (504), Expect = 0.0 Identities = 609/642 (94%), Gaps = 9/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135787 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 135728 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| |||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 135727 tgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 135668 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||| ||||||||||||||| || || |||||||| Sbjct: 135667 aatagaacatgaaaccgta---agcttccaagcagtgggaggagacgagga-ctctgacc 135612 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135611 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 135555 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| || |||| |||||||||||||||||||| Sbjct: 135554 --ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacc 135497 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 135496 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 135437 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135436 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 135377 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135376 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 135317 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 135316 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 135257 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 135256 tgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggg 135197 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135196 gataagcttcatcgtcgagagggaaacagcccggatcaccag 135155 Score = 999 bits (504), Expect = 0.0 Identities = 609/642 (94%), Gaps = 9/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106620 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 106679 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| |||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 106680 tgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 106739 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||| ||||||||||||||| || || |||||||| Sbjct: 106740 aatagaacatgaaaccgta---agcttccaagcagtgggaggagacgagga-ctctgacc 106795 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106796 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 106852 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| || |||| |||||||||||||||||||| Sbjct: 106853 --ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacc 106910 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 106911 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 106970 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106971 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 107030 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107031 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 107090 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107091 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 107150 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 107151 tgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggg 107210 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107211 gataagcttcatcgtcgagagggaaacagcccggatcaccag 107252
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 997 bits (503), Expect = 0.0 Identities = 610/644 (94%), Gaps = 10/644 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139319 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 139260 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 139259 tgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 139200 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga--aagtgatctctga 178 |||||||| ||||||||| |||||||||||||||||||| || | | |||||| Sbjct: 139199 aatagaacatgaaaccgta---agctcccaagcagtgggaggagactactaggactctga 139143 Query: 179 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 238 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139142 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac- 139084 Query: 239 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 298 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 139083 ----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgga 139028 Query: 299 cccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggt 358 |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 139027 cccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggt 138968 Query: 359 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138967 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 138908 Query: 419 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138907 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca 138848 Query: 479 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 538 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 138847 tctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaac 138788 Query: 539 tctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgg 598 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 138787 tctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgagacgatgg 138728 Query: 599 gggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138727 gggataagcttcatcgtcgagagggaaacagcccggatcaccag 138684 Score = 997 bits (503), Expect = 0.0 Identities = 610/644 (94%), Gaps = 10/644 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109980 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 110039 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 110040 tgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 110099 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga--aagtgatctctga 178 |||||||| ||||||||| |||||||||||||||||||| || | | |||||| Sbjct: 110100 aatagaacatgaaaccgta---agctcccaagcagtgggaggagactactaggactctga 110156 Query: 179 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 238 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110157 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac- 110215 Query: 239 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 298 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 110216 ----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgga 110271 Query: 299 cccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggt 358 |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 110272 cccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggt 110331 Query: 359 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110332 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 110391 Query: 419 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110392 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca 110451 Query: 479 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 538 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 110452 tctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaac 110511 Query: 539 tctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgg 598 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 110512 tctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgagacgatgg 110571 Query: 599 gggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110572 gggataagcttcatcgtcgagagggaaacagcccggatcaccag 110615
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 991 bits (500), Expect = 0.0 Identities = 608/642 (94%), Gaps = 9/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 451 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 452 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 511 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || |||||||| Sbjct: 512 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctctgacc 567 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 568 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 624 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 625 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 682 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| Sbjct: 683 cgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtcc 742 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 802 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 803 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 862 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 863 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 922 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||| Sbjct: 923 tgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggg 982 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 983 gataagcttcatcgtcgagagggaaacagcccggatcaccag 1024
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 991 bits (500), Expect = 0.0 Identities = 608/642 (94%), Gaps = 9/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132605 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 132546 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 132545 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 132486 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || |||||||| Sbjct: 132485 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctctgacc 132430 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132429 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 132373 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 132372 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 132315 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| Sbjct: 132314 cgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtcc 132255 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132254 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 132195 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132194 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 132135 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 132134 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 132075 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||| Sbjct: 132074 tgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggg 132015 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 132014 gataagcttcatcgtcgagagggaaacagcccggatcaccag 131973 Score = 991 bits (500), Expect = 0.0 Identities = 608/642 (94%), Gaps = 9/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104159 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 104218 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 104219 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 104278 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || |||||||| Sbjct: 104279 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctctgacc 104334 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104335 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 104391 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 104392 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 104449 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| Sbjct: 104450 cgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtcc 104509 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104510 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 104569 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104570 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 104629 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 104630 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 104689 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||| Sbjct: 104690 tgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggg 104749 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104750 gataagcttcatcgtcgagagggaaacagcccggatcaccag 104791
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 991 bits (500), Expect = 0.0 Identities = 608/642 (94%), Gaps = 9/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 460 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 461 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 520 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | | | |||||||| Sbjct: 521 aatagaacatgaaaccgta---agctcccaagcagtgggaggagcccgggg-ctctgacc 576 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 577 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 633 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 634 --ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatggacc 691 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| Sbjct: 692 cgaacctgggtgatctatccatgaccaggatggagcttgggtgaaactaagtggaggtcc 751 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 752 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 811 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 871 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 872 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 931 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||| Sbjct: 932 tgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgagacaatgggg 991 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 992 gataagcttcatcgtcgagagggaaacagcccggatcaccag 1033
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 991 bits (500), Expect = 0.0 Identities = 608/642 (94%), Gaps = 9/642 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133566 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 133507 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 133506 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 133447 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || |||||||| Sbjct: 133446 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctctgacc 133391 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133390 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 133334 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 133333 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 133276 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| Sbjct: 133275 cgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtcc 133216 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 133215 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 133156 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133155 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 133096 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 133095 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 133036 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||| Sbjct: 133035 tgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggg 132976 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 132975 gataagcttcatcgtcgagagggaaacagcccggatcaccag 132934 Score = 991 bits (500), Expect = 0.0 Identities = 608/642 (94%), Gaps = 9/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105083 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 105142 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 105143 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 105202 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || |||||||| Sbjct: 105203 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctctgacc 105258 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105259 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 105315 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 105316 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 105373 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||| Sbjct: 105374 cgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtcc 105433 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105434 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 105493 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105494 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 105553 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 105554 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 105613 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||| Sbjct: 105614 tgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtgggg 105673 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105674 gataagcttcatcgtcgagagggaaacagcccggatcaccag 105715
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 985 bits (497), Expect = 0.0 Identities = 609/643 (94%), Gaps = 10/643 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131475 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 131416 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| |||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 131415 tgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 131356 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgac 179 |||||||| ||||||||| |||||||||||||||||||| || | || ||||||| Sbjct: 131355 aatagaacatgaaaccgta---agctcccaagcagtgggaggaggctcggga-ctctgac 131300 Query: 180 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131299 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaaa-- 131242 Query: 240 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 299 ||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct: 131241 ---ccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgcttatggac 131185 Query: 300 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 359 ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 131184 ccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtc 131125 Query: 360 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131124 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 131065 Query: 420 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacat 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 131064 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacat 131005 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 131004 ctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaact 130945 Query: 540 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 599 ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 130944 ctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgagacgatggg 130885 Query: 600 ggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130884 ggataagcttcatcgtcgagagggaaacagcccggatcaccag 130842 Score = 985 bits (497), Expect = 0.0 Identities = 609/643 (94%), Gaps = 10/643 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103919 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 103978 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| |||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 103979 tgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 104038 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgac 179 |||||||| ||||||||| |||||||||||||||||||| || | || ||||||| Sbjct: 104039 aatagaacatgaaaccgta---agctcccaagcagtgggaggaggctcggga-ctctgac 104094 Query: 180 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104095 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaaa-- 104152 Query: 240 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 299 ||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||| Sbjct: 104153 ---ccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgcttatggac 104209 Query: 300 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 359 ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 104210 ccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtc 104269 Query: 360 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104270 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 104329 Query: 420 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacat 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 104330 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagacat 104389 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 104390 ctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaact 104449 Query: 540 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 599 ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 104450 ctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgagacgatggg 104509 Query: 600 ggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104510 ggataagcttcatcgtcgagagggaaacagcccggatcaccag 104552
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 981 bits (495), Expect = 0.0 Identities = 611/644 (94%), Gaps = 13/644 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2162 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 2221 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 2222 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 2281 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 2282 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 2336 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2337 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 2393 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 2394 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 2451 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg-tc 359 |||||||||||||||||||||||||||||||||||||||| |||||||||| |||| || Sbjct: 2452 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagggtc 2511 Query: 360 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg-ccact 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2512 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatggccact 2571 Query: 419 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2572 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca 2631 Query: 479 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 538 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 2632 tctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaac 2691 Query: 539 tctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgg 598 ||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||| Sbjct: 2692 tctgaatactagatatgactc-aaaataacaggggtcaaggtcggctagtgagacgatgg 2750 Query: 599 gggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2751 gggataagcttcatcgtcgagagggaaacagtccggatcaccag 2794
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 981 bits (495), Expect = 0.0 Identities = 607/642 (94%), Gaps = 13/642 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 494 ggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaaggctaaatactcctggg 553 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||| | ||| ||||| Sbjct: 554 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc-atcggggagtga 612 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | | |||||||| Sbjct: 613 aatagaacatgaaaccgta---agctcccaagcagtgggaggccaggg----ctctgacc 665 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 666 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 722 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 723 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 780 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 781 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 840 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 900 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 960 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 961 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 1020 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 1021 tgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggg 1080 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 gataagcttcatcgtcgagagggaaacagcccggatcaccag 1122
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 971 bits (490), Expect = 0.0 Identities = 605/642 (94%), Gaps = 11/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 460 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 461 tgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtga 520 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||| ||| ||||||||| ||||| |||||||||||||| || || |||||| | Sbjct: 521 aataaaacatgaaaccgta---agctctcaagcagtgggaggagacagg---ctctgaac 574 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 575 gcgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttggttaagggaac--- 631 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 632 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 689 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 690 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 749 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 809 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 869 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 870 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 929 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 930 tgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggg 989 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 990 gataagcttcatcgtccagagggaaacagcccggatcaccag 1031
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 967 bits (488), Expect = 0.0 Identities = 608/644 (94%), Gaps = 13/644 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 889 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 948 Query: 61 tgaccgatagcgaagtagtacc-gtgagggaaaggtgaaaagaacccccagtgggtagtg 119 ||||||||||| || ||||||| ||||||||||||||||||||||||||| ||| |||| Sbjct: 949 tgaccgatagccaaatagtacccgtgagggaaaggtgaaaagaacccccatcggggagtg 1008 Query: 120 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 179 ||||||||| ||||||||| ||||| |||||||||||||| || || ||||||| Sbjct: 1009 aaatagaacatgaaaccgta---agctctcaagcagtgggaggagacagg---ctctgac 1062 Query: 180 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1063 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac-- 1120 Query: 240 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 299 ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1121 ---ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggac 1177 Query: 300 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 359 ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 1178 ccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgagggtc 1237 Query: 360 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1238 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 1297 Query: 420 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacat 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1298 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacat 1357 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 1358 ctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaact 1417 Query: 540 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgat-gg 598 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 1418 ctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatggg 1477 Query: 599 gggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1478 gggataagcttcatcgtcgagagggaaacagcccggatcaccag 1521
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 948 bits (478), Expect = 0.0 Identities = 602/642 (93%), Gaps = 16/642 (2%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139967 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 139908 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 139907 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 139848 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| || ||||||||||||||||| || | | |||||||| Sbjct: 139847 aatagaacatgaaaccgta---agttcccaagcagtgggaggagacggggg-ctctgacc 139792 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139791 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 139735 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 139734 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 139677 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 139676 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 139617 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139616 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 139557 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 139556 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatc 139497 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 139496 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 139437 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||| || || |||| ||||||||||||||||||||||||||||| Sbjct: 139436 tgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggg 139384 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 139383 gataagcttcatcgtcgagagggaaacagcccggatcaccag 139342 Score = 948 bits (478), Expect = 0.0 Identities = 602/642 (93%), Gaps = 16/642 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110093 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 110152 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 110153 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 110212 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| || ||||||||||||||||| || | | |||||||| Sbjct: 110213 aatagaacatgaaaccgta---agttcccaagcagtgggaggagacggggg-ctctgacc 110268 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110269 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 110325 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 110326 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 110383 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 110384 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 110443 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110444 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 110503 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 110504 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggacatc 110563 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 110564 taggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactc 110623 Query: 541 tgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 600 |||||||||||| || || |||| ||||||||||||||||||||||||||||| Sbjct: 110624 tgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggg 110676 Query: 601 gataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 110677 gataagcttcatcgtcgagagggaaacagcccggatcaccag 110718
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 936 bits (472), Expect = 0.0 Identities = 601/641 (93%), Gaps = 11/641 (1%) Strand = Plus / Minus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52290 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggta 52231 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 |||||||| ||||||||||||||||||| ||||||||||||||||| |||| ||||||| Sbjct: 52230 accgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaa 52171 Query: 123 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 182 |||||| ||||||||| |||||||||||||||||||| | || | |||||||||| Sbjct: 52170 tagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgc 52116 Query: 183 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 242 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 52115 gtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaagggaac----- 52061 Query: 243 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 302 ||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||||| Sbjct: 52060 ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacccg 52001 Query: 303 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 362 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 52000 aacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccga 51941 Query: 363 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51940 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 51881 Query: 423 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51880 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 51821 Query: 483 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 542 |||||||||||||||||| |||||||| | | ||||||||||||||||| |||||||||| Sbjct: 51820 ggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctg 51761 Query: 543 aatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 601 |||||||| |||||||| | |||||| |||||| |||||||||||||||||||||||||| Sbjct: 51760 aatactagaatatgacctacaaataataggggtaaaggtcggccagtgagacgatggggg 51701 Query: 602 ataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 51700 ataagcttcatcgtcgagagggaaacagcccggatcaccag 51660 Score = 936 bits (472), Expect = 0.0 Identities = 601/641 (93%), Gaps = 11/641 (1%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37538 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggta 37597 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 |||||||| ||||||||||||||||||| ||||||||||||||||| |||| ||||||| Sbjct: 37598 accgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaa 37657 Query: 123 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 182 |||||| ||||||||| |||||||||||||||||||| | || | |||||||||| Sbjct: 37658 tagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgc 37712 Query: 183 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 242 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 37713 gtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaagggaac----- 37767 Query: 243 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 302 ||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||||| Sbjct: 37768 ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacccg 37827 Query: 303 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 362 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 37828 aacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccga 37887 Query: 363 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37888 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 37947 Query: 423 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37948 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 38007 Query: 483 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 542 |||||||||||||||||| |||||||| | | ||||||||||||||||| |||||||||| Sbjct: 38008 ggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctg 38067 Query: 543 aatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 601 |||||||| |||||||| | |||||| |||||| |||||||||||||||||||||||||| Sbjct: 38068 aatactagaatatgacctacaaataataggggtaaaggtcggccagtgagacgatggggg 38127 Query: 602 ataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 38128 ataagcttcatcgtcgagagggaaacagcccggatcaccag 38168
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 936 bits (472), Expect = 0.0 Identities = 601/641 (93%), Gaps = 11/641 (1%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4466 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggta 4525 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 |||||||| ||||||||||||||||||| ||||||||||||||||| |||| ||||||| Sbjct: 4526 accgatagttaagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaa 4585 Query: 123 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 182 |||||| ||||||||| |||||||||||||||||||| | || | |||||||||| Sbjct: 4586 tagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgaccgc 4640 Query: 183 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 242 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 4641 gtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaagggaac----- 4695 Query: 243 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 302 ||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||||| Sbjct: 4696 ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgcttatggacccg 4755 Query: 303 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 362 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 4756 aacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccga 4815 Query: 363 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4816 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 4875 Query: 423 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4876 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 4935 Query: 483 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 542 |||||||||||||||||| |||||||| | | ||||||||||||||||| |||||||||| Sbjct: 4936 ggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctg 4995 Query: 543 aatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 601 |||||||| |||||||| | |||||| |||||| |||||||||||||||||||||||||| Sbjct: 4996 aatactagaatatgacctacaaataataggggtaaaggtcggccagtgagacgatggggg 5055 Query: 602 ataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5056 ataagcttcatcgtcgagagggaaacagcccggatcaccag 5096
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 924 bits (466), Expect = 0.0 Identities = 602/644 (93%), Gaps = 10/644 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 394 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 453 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 454 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccataggggagtga 513 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| ||| |||||||||| Sbjct: 514 aatagaacatgaaaccgta---agctcccaagcagtgggaggagaatcgaatctctgacc 570 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||| Sbjct: 571 gcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaagggaac--- 627 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| Sbjct: 628 --ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacc 685 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 686 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 745 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 805 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 806 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactat 865 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 866 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 925 Query: 540 ctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagtgagacgatgg 598 ||||||||||||||||| || |||||||||||| | |||||| ||||||||||| ||| Sbjct: 926 ctgaatactagatatgatccccaaataacaggggataaaggtcaaccagtgagacggtgg 985 Query: 599 gggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 986 gggataagcttcatcgtcaagagggaaacagcccagatcaccag 1029
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 910 bits (459), Expect = 0.0 Identities = 600/643 (93%), Gaps = 13/643 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86657 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 86716 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 86717 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 86776 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| || ||||||||||| Sbjct: 86777 aatagaacatgaaaccgta---agctcccaagcagtgggaggaaaattagatctctgacc 86833 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 86834 gcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagggaac--- 86890 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 |||||||||||||||||| |||||||||| || |||| |||||||||||||||||||| Sbjct: 86891 --ccaccggagccgtagcgagagcgagtcttcatggggcaattgtcactgcttatggacc 86948 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 86949 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 87008 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 87009 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 87068 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-cat 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 87069 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccat 87128 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||| Sbjct: 87129 ctaggggtaaagcactgtttcggtacgggccgcgagagcggtaccaaatcgaggcaaact 87188 Query: 540 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 599 ||||||||||||| || ||| ||||| |||||| | |||| |||||||||||||||| Sbjct: 87189 ctgaatactagat-tgcccc---aataaaaggggtaagggtcaaccagtgagacgatggg 87244 Query: 600 ggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 87245 ggataagcttcatcgtcgagaggggaacagcccagatcaccag 87287
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 892 bits (450), Expect = 0.0 Identities = 598/644 (92%), Gaps = 10/644 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 453 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 454 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 513 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||| Sbjct: 514 aatagaacatgaaaccgta---agctcccaagcagtgggaggagaatcggatctctgacc 570 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| ||||| |||||| |||||||||| || Sbjct: 571 gcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaaggggac--- 627 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| | |||| ||||||||| |||||||||| Sbjct: 628 --ccaccggagccgtagcgaaagcgagtcttcctggggcaattgtcactacttatggacc 685 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||| Sbjct: 686 cgaacctgggtgatctatccatgaccaggatgaagctcgggtgaaactaagtggaggtcc 745 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 805 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 806 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactat 865 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 866 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 925 Query: 540 ctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagtgagacgatgg 598 ||||||||||||||||| | |||||| |||| | | |||| ||||||||||| ||| Sbjct: 926 ctgaatactagatatgatctccgaataacgggggataagggtcaaccagtgagacggtgg 985 Query: 599 gggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 986 gggataagcttcatcgtcgagagggaaacagcccagatcaccag 1029
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 892 bits (450), Expect = 0.0 Identities = 598/644 (92%), Gaps = 10/644 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 117755 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 117696 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 117695 tgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 117636 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| ||| |||||||||| Sbjct: 117635 aatagaacatgaaaccgta---agctcccaagcagtgggaggagaatcgaatctctgacc 117579 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||| Sbjct: 117578 gcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaagggaac--- 117522 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| Sbjct: 117521 --ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacc 117464 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 ||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct: 117463 cgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 117404 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 117403 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 117344 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 117343 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactat 117284 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 117283 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 117224 Query: 540 ctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtgagacgatgg 598 ||||||||||||||||| || |||||| | ||||| | |||| ||||||||||| ||| Sbjct: 117223 ctgaatactagatatgatccccaaataatagggggtaatggtcaaccagtgagacggtgg 117164 Query: 599 gggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 117163 gggataagcttcatcgtcaagagggaaacagcccagatcaccag 117120 Score = 892 bits (450), Expect = 0.0 Identities = 598/644 (92%), Gaps = 10/644 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 90347 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 90406 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 90407 tgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 90466 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| ||| |||||||||| Sbjct: 90467 aatagaacatgaaaccgta---agctcccaagcagtgggaggagaatcgaatctctgacc 90523 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||| Sbjct: 90524 gcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaagggaac--- 90580 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| Sbjct: 90581 --ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacc 90638 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 ||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct: 90639 cgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 90698 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 90699 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 90758 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 90759 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactat 90818 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 90819 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 90878 Query: 540 ctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtgagacgatgg 598 ||||||||||||||||| || |||||| | ||||| | |||| ||||||||||| ||| Sbjct: 90879 ctgaatactagatatgatccccaaataatagggggtaatggtcaaccagtgagacggtgg 90938 Query: 599 gggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 90939 gggataagcttcatcgtcaagagggaaacagcccagatcaccag 90982
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 888 bits (448), Expect = 0.0 Identities = 596/641 (92%), Gaps = 12/641 (1%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 cacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggta 455 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 ||| |||| ||||||||||||||||||| ||||||||||||||| | |||| ||||||| Sbjct: 456 accaatagtaaagtagtaccgtgagggaagggtgaaaagaacccc-attggggagtgaaa 514 Query: 123 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 182 |||||| ||||||||| |||| ||||||||||||||| | || | |||||||||| Sbjct: 515 tagaacatgaaaccgta---agctaccaagcagtgggaggagccaggg--ctctgaccgc 569 Query: 183 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 242 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 570 gtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaagggaac----- 624 Query: 243 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 302 ||||||||||| |||||||||||||| || ||||| | |||||||||||||||||||||| Sbjct: 625 ccaccggagccatagcgaaagcgagtattcataggactattgtcactgcttatggacccg 684 Query: 303 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 362 |||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||| Sbjct: 685 aacctgggtgatctatccatgaccaggatgaagctttggtgaaactaagtggaggtccga 744 Query: 363 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 804 Query: 423 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 805 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 864 Query: 483 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 542 |||||||||||||||||| |||||||| | | ||||||||||||||||| |||||||||| Sbjct: 865 ggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctg 924 Query: 543 aatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 601 |||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 925 aatactagaatatgacctaaaaataacaggggtaaaggtcggccagtgagacgatggggg 984 Query: 602 ataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 985 ataagcttcatcgtcgagagggaaacagcccagatcaccag 1025
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 884 bits (446), Expect = 0.0 Identities = 449/450 (99%) Strand = Plus / Plus Query: 193 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 253 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 313 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 373 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 241 Query: 433 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 301 Query: 493 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 361 Query: 553 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 421 Query: 613 cgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||| Sbjct: 422 cgtcgagagggaaacagcccggatcaccag 451
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 884 bits (446), Expect = 0.0 Identities = 597/643 (92%), Gaps = 12/643 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88743 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 88802 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 88803 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 88862 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| || ||||||||||| Sbjct: 88863 aatagaacatgaaaccgta---agctcccaagcagtgggaggaaaattagatctctgacc 88919 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 88920 gcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagggaac--- 88976 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 |||||||||||||||||| |||||||||| || |||| |||||||||||||||||||| Sbjct: 88977 --ccaccggagccgtagcgagagcgagtcttcatggggcaattgtcactgcttatggacc 89034 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 89035 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 89094 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 89095 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 89154 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-cat 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 89155 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccat 89214 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||| Sbjct: 89215 ctaggggtaaagcactgtttcggtacgggccacgagagcggtaccaaatcgaggcaaact 89274 Query: 540 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 599 ||||||||||||| | ||||| | || ||||| | |||| |||||||||||||||| Sbjct: 89275 ctgaatactagat-taccccaata--aaagggggtaagggtcaaccagtgagacgatggg 89331 Query: 600 ggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 89332 ggataagcttcatcgtcgagaggggaacagcccagatcaccag 89374
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 882 bits (445), Expect = 0.0 Identities = 448/449 (99%) Strand = Plus / Plus Query: 194 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 254 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 313 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 314 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 180 Query: 374 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 240 Query: 434 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 300 Query: 494 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 360 Query: 554 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 613 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 420 Query: 614 gtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||| Sbjct: 421 gtcgagagggaaacagcccggatcaccag 449
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 864 bits (436), Expect = 0.0 Identities = 593/642 (92%), Gaps = 10/642 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 457 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 458 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 517 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||| Sbjct: 518 aatagaacatgaaaccgta---agctcccaagcagtgggaggagaatcggatctctgacc 574 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 575 gcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggaac--- 631 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 |||||||||||||||||||||| |||||| | |||| |||||||||||||||||||| Sbjct: 632 --ccaccggagccgtagcgaaagcaagtcttcctggggcaattgtcactgcttatggacc 689 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 690 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 749 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 809 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 810 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagactat 869 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 870 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 929 Query: 540 ctgaatactagatatgacccaaaaataacag-gggtcaaggtcggccagtgagacgatgg 598 ||||||||| |||| ||| | ||||| || | || | |||| |||||||||| ||| Sbjct: 930 ctgaatactggataggactccctaataatagagagtaagggtcaaccagtgagacagtgg 989 Query: 599 gggataagcttcatcgtcgagagggaaacagcccggatcacc 640 |||||||||||||| |||||||||| |||||||| ||||||| Sbjct: 990 gggataagcttcattgtcgagaggggaacagcccagatcacc 1031
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 860 bits (434), Expect = 0.0 Identities = 593/641 (92%), Gaps = 15/641 (2%) Strand = Plus / Minus Query: 9 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 68 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 146157 gaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 146098 Query: 69 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 128 ||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 146097 agcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaac 146038 Query: 129 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 188 ||||||||| ||||||||||||||||||| ||| |||| |||||||||||||| Sbjct: 146037 atgaaaccgtag---gctcccaagcagtgggaggagaatcggatccctgaccgcgtgcct 145981 Query: 189 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 248 |||||||||||||||||||||| |||||||||||| ||||||||||||| |||||| Sbjct: 145980 gttgaagaatgagccggcgacttataggcagtggcctggttaagggaac-----ccaccg 145926 Query: 249 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 308 ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 145925 gagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctg 145866 Query: 309 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 368 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 145865 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 145806 Query: 369 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 428 |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 145805 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaatcgaacccaga 145746 Query: 429 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 487 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 145745 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 145686 Query: 488 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 145685 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 145626 Query: 548 tagatatga--cccaa---aaataacagg-ggtcaaggtcggccagtgagacgatggggg 601 ||| ||||| |||| ||| |||||| ||| |||||| |||||||||||| |||||| Sbjct: 145625 taggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtgagacggtggggg 145566 Query: 602 ataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 145565 ataagcttcatcgtcgagaggggaacagcccagatcaccag 145525 Score = 860 bits (434), Expect = 0.0 Identities = 593/641 (92%), Gaps = 15/641 (2%) Strand = Plus / Plus Query: 9 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 68 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 112305 gaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgat 112364 Query: 69 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 128 ||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 112365 agcaaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaac 112424 Query: 129 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 188 ||||||||| ||||||||||||||||||| ||| |||| |||||||||||||| Sbjct: 112425 atgaaaccgtag---gctcccaagcagtgggaggagaatcggatccctgaccgcgtgcct 112481 Query: 189 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 248 |||||||||||||||||||||| |||||||||||| ||||||||||||| |||||| Sbjct: 112482 gttgaagaatgagccggcgacttataggcagtggcctggttaagggaac-----ccaccg 112536 Query: 249 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 308 ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct: 112537 gagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctg 112596 Query: 309 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 368 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 112597 ggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgac 112656 Query: 369 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 428 |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 112657 tgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaatcgaacccaga 112716 Query: 429 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggt 487 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112717 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggt 112776 Query: 488 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 112777 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 112836 Query: 548 tagatatga--cccaa---aaataacagg-ggtcaaggtcggccagtgagacgatggggg 601 ||| ||||| |||| ||| |||||| ||| |||||| |||||||||||| |||||| Sbjct: 112837 taggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtgagacggtggggg 112896 Query: 602 ataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 112897 ataagcttcatcgtcgagaggggaacagcccagatcaccag 112937
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 858 bits (433), Expect = 0.0 Identities = 592/643 (92%), Gaps = 9/643 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128047 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 127988 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 127987 tgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtga 127928 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||| Sbjct: 127927 aatagaacatgaaaccgta---agctcccaagcagtgggaggagaattggatctctgacc 127871 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 || |||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 127870 gcatgcctgttgaggaatgagccggcgactcataggcagtggcctggttaagggaac--- 127814 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||| Sbjct: 127813 --ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctcatggacc 127756 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||| Sbjct: 127755 cgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaactaagtggaggtcc 127696 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 127695 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 127636 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 127635 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggactac 127576 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 127575 ctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaact 127516 Query: 540 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 599 ||||||||||| |||||||| || ||| ||| | |||| |||||||||||||||| Sbjct: 127515 ctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgatggg 127456 Query: 600 ggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||| |||||||||| |||||||| ||||||||| Sbjct: 127455 ggataagcttcattgtcgagaggggaacagcccagatcaccag 127413 Score = 858 bits (433), Expect = 0.0 Identities = 592/643 (92%), Gaps = 9/643 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95400 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 95459 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 95460 tgaccgatagcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtga 95519 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||| Sbjct: 95520 aatagaacatgaaaccgta---agctcccaagcagtgggaggagaattggatctctgacc 95576 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 || |||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 95577 gcatgcctgttgaggaatgagccggcgactcataggcagtggcctggttaagggaac--- 95633 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||| Sbjct: 95634 --ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgctcatggacc 95691 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||| Sbjct: 95692 cgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaactaagtggaggtcc 95751 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95752 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 95811 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 95812 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgaccggactac 95871 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 95872 ctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaact 95931 Query: 540 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 599 ||||||||||| |||||||| || ||| ||| | |||| |||||||||||||||| Sbjct: 95932 ctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgatggg 95991 Query: 600 ggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||| |||||||||| |||||||| ||||||||| Sbjct: 95992 ggataagcttcattgtcgagaggggaacagcccagatcaccag 96034
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 835 bits (421), Expect = 0.0 Identities = 520/551 (94%), Gaps = 9/551 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 115817 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 115758 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 115757 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 115698 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| ||| |||||||||| Sbjct: 115697 aatagaacatgaaaccgta---agctcccaagcagtgggaggagaattgaatctctgacc 115641 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | Sbjct: 115640 gcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggagc--- 115584 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 115583 --ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggacc 115526 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 115525 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 115466 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 115465 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 115406 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 115405 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactat 115346 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 115345 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 115286 Query: 540 ctgaatactag 550 ||||||||||| Sbjct: 115285 ctgaatactag 115275 Score = 835 bits (421), Expect = 0.0 Identities = 520/551 (94%), Gaps = 9/551 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 86303 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 86362 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 86363 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 86422 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| ||| |||||||||| Sbjct: 86423 aatagaacatgaaaccgta---agctcccaagcagtgggaggagaattgaatctctgacc 86479 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | Sbjct: 86480 gcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggagc--- 86536 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 86537 --ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggacc 86594 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 86595 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 86654 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86655 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 86714 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 86715 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactat 86774 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 86775 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 86834 Query: 540 ctgaatactag 550 ||||||||||| Sbjct: 86835 ctgaatactag 86845 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 578 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 637 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 638 accag 642 ||||| Sbjct: 115186 accag 115182 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 578 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 637 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 638 accag 642 ||||| Sbjct: 86934 accag 86938
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 821 bits (414), Expect = 0.0 Identities = 522/556 (93%), Gaps = 9/556 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4283 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 4342 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 4343 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 4402 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||| ||| |||| |||||||||| |||| ||| ||||||||||| Sbjct: 4403 aatagaacatgaaatcgta---agcttccaagcagtgagaggagaatcggatctctgacc 4459 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 4460 gcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggaatt-- 4517 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 4518 ---caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacc 4574 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 4575 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 4634 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4635 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 4694 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4695 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactat 4754 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4755 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 4814 Query: 540 ctgaatactagatatg 555 ||||||||||| |||| Sbjct: 4815 ctgaatactaggtatg 4830 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 578 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 637 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 638 accag 642 ||||| Sbjct: 4918 accag 4922
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 821 bits (414), Expect = 0.0 Identities = 522/556 (93%), Gaps = 9/556 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 452 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 453 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 512 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||| ||| |||| |||||||||| |||| ||| ||||||||||| Sbjct: 513 aatagaacatgaaatcgta---agcttccaagcagtgagaggagaatcggatctctgacc 569 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 570 gcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggaatt-- 627 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 628 ---caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacc 684 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 685 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 744 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 804 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 805 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactat 864 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 865 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 924 Query: 540 ctgaatactagatatg 555 ||||||||||| |||| Sbjct: 925 ctgaatactaggtatg 940 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 578 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 637 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 638 accag 642 ||||| Sbjct: 1028 accag 1032
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 821 bits (414), Expect = 0.0 Identities = 522/556 (93%), Gaps = 9/556 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150852 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 150793 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 150792 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 150733 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||| ||| |||| |||||||||| |||| ||| ||||||||||| Sbjct: 150732 aatagaacatgaaatcgta---agcttccaagcagtgagaggagaatcggatctctgacc 150676 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 150675 gcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggaatt-- 150618 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 150617 ---caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacc 150561 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 150560 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 150501 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 150500 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 150441 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 150440 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactat 150381 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 150380 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 150321 Query: 540 ctgaatactagatatg 555 ||||||||||| |||| Sbjct: 150320 ctgaatactaggtatg 150305 Score = 821 bits (414), Expect = 0.0 Identities = 522/556 (93%), Gaps = 9/556 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117814 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 117873 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 117874 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 117933 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||| ||| |||| |||||||||| |||| ||| ||||||||||| Sbjct: 117934 aatagaacatgaaatcgta---agcttccaagcagtgagaggagaatcggatctctgacc 117990 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 117991 gcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggaatt-- 118048 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 118049 ---caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacc 118105 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 118106 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 118165 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 118166 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 118225 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 118226 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactat 118285 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 118286 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 118345 Query: 540 ctgaatactagatatg 555 ||||||||||| |||| Sbjct: 118346 ctgaatactaggtatg 118361 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Minus Query: 578 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 637 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 638 accag 642 ||||| Sbjct: 150217 accag 150213 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 578 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 637 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 638 accag 642 ||||| Sbjct: 118449 accag 118453
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 821 bits (414), Expect = 0.0 Identities = 522/556 (93%), Gaps = 9/556 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 452 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 453 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 512 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||| ||| |||| |||||||||| |||| ||| ||||||||||| Sbjct: 513 aatagaacatgaaatcgta---agcttccaagcagtgagaggagaatcggatctctgacc 569 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 570 gcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggaatt-- 627 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 628 ---caccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacc 684 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 685 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 744 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 804 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 805 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggactat 864 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 865 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 924 Query: 540 ctgaatactagatatg 555 ||||||||||| |||| Sbjct: 925 ctgaatactaggtatg 940 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 578 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 637 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 638 accag 642 ||||| Sbjct: 1028 accag 1032
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 819 bits (413), Expect = 0.0 Identities = 521/554 (94%), Gaps = 6/554 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 436 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 437 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 496 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||| ||||||||||||||| ||| ||||||||||| Sbjct: 497 aatagaacatgaaaccgta---agcttccaagcagtgggaggagaatcggatctctgacc 553 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| | | Sbjct: 554 gcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagggaaagaa 613 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 614 --ccaccggagccatagcgaaagcgagtcttcccagggcaattgtcactgcttatggacc 671 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 672 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 731 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 gaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcg 791 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || Sbjct: 792 aacccagagctagctggttctccccgaaatgcgttgaggcgcaacagttgactggactat 851 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 852 ctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaact 911 Query: 540 ctgaatactagata 553 ||||||||| |||| Sbjct: 912 ctgaatactggata 925 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccag 1013
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 811 bits (409), Expect = 0.0 Identities = 519/554 (93%), Gaps = 10/554 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4624 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 4683 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 4684 tgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtga 4743 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | | | |||||||| Sbjct: 4744 aatagaacatgaaaccgta---agctcccaagcagtgggaggagctgggg--ctctgacc 4798 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4799 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaaa--- 4855 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 4856 --ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacc 4913 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||| Sbjct: 4914 cgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagtggaggtcc 4973 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 4974 gaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccactcg 5033 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5034 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 5093 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| Sbjct: 5094 taggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactc 5153 Query: 541 tgaatactagatat 554 |||||||||||||| Sbjct: 5154 tgaatactagatat 5167 Score = 119 bits (60), Expect = 1e-23 Identities = 63/64 (98%) Strand = Plus / Plus Query: 579 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 638 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 639 ccag 642 |||| Sbjct: 5242 ccag 5245
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 811 bits (409), Expect = 0.0 Identities = 519/554 (93%), Gaps = 10/554 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23301 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 23242 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 23241 tgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtga 23182 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | | | |||||||| Sbjct: 23181 aatagaacatgaaaccgta---agctcccaagcagtgggaggagctgggg--ctctgacc 23127 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23126 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaaa--- 23070 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 23069 --ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacc 23012 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||| Sbjct: 23011 cgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagtggaggtcc 22952 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 22951 gaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccactcg 22892 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22891 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 22832 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| Sbjct: 22831 taggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactc 22772 Query: 541 tgaatactagatat 554 |||||||||||||| Sbjct: 22771 tgaatactagatat 22758 Score = 119 bits (60), Expect = 1e-23 Identities = 63/64 (98%) Strand = Plus / Minus Query: 579 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 638 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 639 ccag 642 |||| Sbjct: 22683 ccag 22680
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 791 bits (399), Expect = 0.0 Identities = 441/456 (96%), Gaps = 13/456 (2%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaagga-----ccaccttgcaaggctaaatactc 55 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 75307 ggcacgtggaatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactc 75248 Query: 56 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 115 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75247 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 75188 Query: 116 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 175 |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 75187 agtgaaatagaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctc 75136 Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75135 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 75076 Query: 236 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 295 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 75075 atggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 75016 Query: 296 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75015 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 74956 Query: 356 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74955 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 74896 Query: 416 actcgaacccagagctagctggttctccccgaaatg 451 |||||||||||||||||||||||||||||||||||| Sbjct: 74895 actcgaacccagagctagctggttctccccgaaatg 74860 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 107 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 614 gtcgagagggaaacagcccggatc 637 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 791 bits (399), Expect = 0.0 Identities = 441/456 (96%), Gaps = 13/456 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaagga-----ccaccttgcaaggctaaatactc 55 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 382231 ggcacgtggaatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactc 382290 Query: 56 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 115 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382291 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 382350 Query: 116 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 175 |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 382351 agtgaaatagaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctc 382402 Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382403 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 382462 Query: 236 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 295 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 382463 atggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 382522 Query: 296 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382523 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 382582 Query: 356 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382583 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 382642 Query: 416 actcgaacccagagctagctggttctccccgaaatg 451 |||||||||||||||||||||||||||||||||||| Sbjct: 382643 actcgaacccagagctagctggttctccccgaaatg 382678 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 107 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 107 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 614 gtcgagagggaaacagcccggatc 637 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 614 gtcgagagggaaacagcccggatc 637 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 791 bits (399), Expect = 0.0 Identities = 441/456 (96%), Gaps = 13/456 (2%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaagga-----ccaccttgcaaggctaaatactc 55 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 113398 ggcacgtggaatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactc 113339 Query: 56 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 115 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113338 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 113279 Query: 116 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 175 |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 113278 agtgaaatagaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctc 113227 Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113226 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 113167 Query: 236 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 295 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 113166 atggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 113107 Query: 296 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113106 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 113047 Query: 356 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113046 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 112987 Query: 416 actcgaacccagagctagctggttctccccgaaatg 451 |||||||||||||||||||||||||||||||||||| Sbjct: 112986 actcgaacccagagctagctggttctccccgaaatg 112951 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 107 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 614 gtcgagagggaaacagcccggatc 637 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 791 bits (399), Expect = 0.0 Identities = 444/460 (96%), Gaps = 13/460 (2%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaagga-----ccaccttgcaaggctaaatactc 55 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 368080 ggcacgtggaatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactc 368021 Query: 56 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 115 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368020 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 367961 Query: 116 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 175 |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 367960 agtgaaatagaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctc 367909 Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367908 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 367849 Query: 236 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 295 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 367848 atggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 367789 Query: 296 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367788 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 367729 Query: 356 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367728 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 367669 Query: 416 actcgaacccagagctagctggttctccccgaaatgcgtt 455 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 367668 actcgaacccagagctagctggttctccccgaaattcgtt 367629 Score = 791 bits (399), Expect = 0.0 Identities = 444/460 (96%), Gaps = 13/460 (2%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaagga-----ccaccttgcaaggctaaatactc 55 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 184685 ggcacgtggaatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactc 184626 Query: 56 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 115 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184625 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 184566 Query: 116 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 175 |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 184565 agtgaaatagaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctc 184514 Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184513 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 184454 Query: 236 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 295 | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 184453 atggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttat 184394 Query: 296 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184393 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 184334 Query: 356 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184333 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 184274 Query: 416 actcgaacccagagctagctggttctccccgaaatgcgtt 455 ||||||||||||||||||||||||||||||||||| |||| Sbjct: 184273 actcgaacccagagctagctggttctccccgaaattcgtt 184234 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 107 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 614 gtcgagagggaaacagcccggatc 637 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 789 bits (398), Expect = 0.0 Identities = 521/559 (93%), Gaps = 11/559 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4893 ggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 4952 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| |||||||||||||||||||||||||||||||||||| | ||| ||||| Sbjct: 4953 tgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcggggagtga 5012 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| ||||||||| |||||||||| | | | |||||||| Sbjct: 5013 aatagaacatgaaaccgta---agctcccaa-cagtgggaggagctgggg--ctctgacc 5066 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5067 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaaa--- 5123 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 5124 --ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacc 5181 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 ||||||||||||||||||||||||||||||||||| || | |||||||||| ||||||| Sbjct: 5182 cgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagtggaggtcc 5241 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||| Sbjct: 5242 gaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccaatcg 5301 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5302 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 5361 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| Sbjct: 5362 taggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactc 5421 Query: 541 tgaatactagatatgaccc 559 ||||||||||||||||||| Sbjct: 5422 tgaatactagatatgaccc 5440 Score = 121 bits (61), Expect = 3e-24 Identities = 71/73 (97%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 571 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 629 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 630 cccggatcaccag 642 ||| ||||||||| Sbjct: 5505 cccagatcaccag 5517
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 789 bits (398), Expect = 0.0 Identities = 521/559 (93%), Gaps = 11/559 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4893 ggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 4952 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| |||||||||||||||||||||||||||||||||||| | ||| ||||| Sbjct: 4953 tgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccctggcggggagtga 5012 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| ||||||||| |||||||||| | | | |||||||| Sbjct: 5013 aatagaacatgaaaccgta---agctcccaa-cagtgggaggagctgggg--ctctgacc 5066 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5067 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaaa--- 5123 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 5124 --ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacc 5181 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 ||||||||||||||||||||||||||||||||||| || | |||||||||| ||||||| Sbjct: 5182 cgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagtggaggtcc 5241 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||| Sbjct: 5242 gaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgccaatcg 5301 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5302 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 5361 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||| Sbjct: 5362 taggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactc 5421 Query: 541 tgaatactagatatgaccc 559 ||||||||||||||||||| Sbjct: 5422 tgaatactagatatgaccc 5440 Score = 121 bits (61), Expect = 3e-24 Identities = 71/73 (97%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 571 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 629 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 630 cccggatcaccag 642 ||| ||||||||| Sbjct: 5505 cccagatcaccag 5517
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 765 bits (386), Expect = 0.0 Identities = 449/470 (95%), Gaps = 5/470 (1%) Strand = Plus / Minus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 129795 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129794 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 129735 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129734 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 129675 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 129674 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 129615 Query: 533 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 592 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 129614 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 129555 Query: 593 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 129554 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccag 129505 Score = 765 bits (386), Expect = 0.0 Identities = 449/470 (95%), Gaps = 5/470 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 102661 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102662 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 102721 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102722 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 102781 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 102782 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 102841 Query: 533 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 592 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 102842 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 102901 Query: 593 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 102902 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccag 102951 Score = 238 bits (120), Expect = 2e-59 Identities = 152/162 (93%), Gaps = 3/162 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130142 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 130083 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| |||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 130082 tgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 130023 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 162 |||||||| |||||||| | |||||||||||||||||||| Sbjct: 130022 aatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 238 bits (120), Expect = 2e-59 Identities = 152/162 (93%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102314 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 102373 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| |||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 102374 tgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 102433 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 162 |||||||| |||||||| | |||||||||||||||||||| Sbjct: 102434 aatagaacatgaaaccg---taagctcccaagcagtgggagg 102472
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 749 bits (378), Expect = 0.0 Identities = 478/508 (94%), Gaps = 10/508 (1%) Strand = Plus / Plus Query: 116 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 175 ||||||||||||| ||||||||| |||||||||||||||||||| | || ||| Sbjct: 364690 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctc 364745 Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364746 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 364805 Query: 236 acggaacccaccggagccgtagcgaaag-cgagtcttaatagggcgattgtcactgctta 294 || ||||||||||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 364806 ac-----ccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgctta 364860 Query: 295 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 354 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | Sbjct: 364861 tggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtgg 364920 Query: 355 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 414 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 364921 aggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgc 364980 Query: 415 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364981 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 365040 Query: 475 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 534 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 365041 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 365100 Query: 535 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 594 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 365101 aaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacg 365160 Query: 595 atgggggataagcttcatcgtcgagagg 622 ||||||||||||||||||||||||||| Sbjct: 365161 gtgggggataagcttcatcgtcgagagg 365188 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 106 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 11520 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 11475 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 617 gagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||| Sbjct: 129347 gagagggaaacagcccggatcaccag 129322 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 614 gtcgagagggaaacagcccggatc 637 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 747 bits (377), Expect = 0.0 Identities = 422/437 (96%), Gaps = 5/437 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 46992 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46993 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 47052 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47053 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 47112 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 47113 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 47172 Query: 533 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 592 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 47173 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 47232 Query: 593 cgatgggggataagctt 609 ||||||||||||||||| Sbjct: 47233 cgatgggggataagctt 47249 Score = 238 bits (120), Expect = 2e-59 Identities = 152/162 (93%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46645 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 46704 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 46705 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 46764 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 162 |||||||| |||||||| | ||||| |||||||||||||| Sbjct: 46765 aatagaacatgaaaccg---taagctctcaagcagtgggagg 46803
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 747 bits (377), Expect = 0.0 Identities = 448/470 (95%), Gaps = 5/470 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 935 Query: 533 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 592 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 936 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 995 Query: 593 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 996 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 1045 Score = 230 bits (116), Expect = 5e-57 Identities = 151/162 (93%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 460 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||| ||||||||||||| ||||||||||||||||| || ||||| Sbjct: 461 tgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatccgggagtga 520 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 162 |||||||| |||||||| | |||||||||||||||||||| Sbjct: 521 aatagaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 745 bits (376), Expect = 0.0 Identities = 446/470 (94%), Gaps = 12/470 (2%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 220 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 280 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 281 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 340 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 341 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 400 Query: 533 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 592 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 401 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 453 Query: 593 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 503
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 737 bits (372), Expect = 0.0 Identities = 445/470 (94%), Gaps = 12/470 (2%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 236 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 296 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 297 gccgctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 356 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 357 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 416 Query: 533 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 592 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 417 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 469 Query: 593 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 519
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 735 bits (371), Expect = 0.0 Identities = 514/557 (92%), Gaps = 11/557 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6154 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 6095 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| Sbjct: 6094 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctatcggggagtga 6035 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| ||| ||||||||||||||| ||| | |||||||||| Sbjct: 6034 aatagaacatgaaaccgta---agcctccaagcagtgggaggagaatggaatctctgacc 5978 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||| ||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 5977 gcgtgccttttgaagaatgagccggcgacttataggcagtggcttggttaagggcac--- 5921 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt-atggac 299 |||||||||||||||||| |||||||||| ||||||| ||||||||||||| |||||| Sbjct: 5920 --ccaccggagccgtagcgagagcgagtcttcatagggcaattgtcactgctttatggac 5863 Query: 300 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 359 |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 5862 ccgaacctgggtgatctatccatgaccaggatgaagct-ggatgaaactaagtagaggtc 5804 Query: 360 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 419 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 5803 cgaaccgactgatgttgcaaaatcagcggatgagttgtggttaggggtgaaatgccactc 5744 Query: 420 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-ca 478 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 5743 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaccg 5684 Query: 479 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 538 ||||||||||||||||||||||||| ||| | | |||||||| | |||||||||||| Sbjct: 5683 tctaggggtaaagcactgtttcggtataggccgtgtaagcggtacgacatcgaggcaaac 5624 Query: 539 tctgaatactagatatg 555 | ||||||||||||||| Sbjct: 5623 tatgaatactagatatg 5607 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 578 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 637 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 638 accag 642 ||||| Sbjct: 5542 accag 5538
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 735 bits (371), Expect = 0.0 Identities = 448/471 (95%), Gaps = 7/471 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 233 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 291 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 292 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 351 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 352 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 814 Query: 412 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 874 Query: 472 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 531 ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 875 ctggacatctaagggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 934 Query: 532 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 591 |||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 935 ggcaaactctgaatactaaatatgacctcaaaataacaggggttaaggtcggccagtgag 994 Query: 592 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 995 acgatgggggataagcttcatcgtccagagggaaacagcccggatcaccag 1045 Score = 238 bits (120), Expect = 2e-59 Identities = 152/162 (93%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 460 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 461 tgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtga 520 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 162 |||||||| |||||||| | |||||||||||||||||||| Sbjct: 521 aatagaacatgaaaccg---taagctcccaagcagtgggagg 559
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 735 bits (371), Expect = 0.0 Identities = 448/471 (95%), Gaps = 7/471 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 177579 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 177580 ggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtgaaat 177638 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177639 gccactcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 177698 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| Sbjct: 177699 tggacatctaggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcgag 177758 Query: 533 gcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtgag 591 |||||||||||||||||||||||||| ||||||| | |||| |||||||||| |||||| Sbjct: 177759 gcaaactctgaatactagatatgacctcaaaataagaggggggcaaggtcggctagtgag 177818 Query: 592 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 177819 acgatgggggataagcttcatcgtcgagagggaaagagcccggatcaccag 177869 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 106 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 106 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 614 gtcgagagggaaacagcccggatc 637 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 614 gtcgagagggaaacagcccggatc 637 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 733 bits (370), Expect = 0.0 Identities = 446/470 (94%), Gaps = 6/470 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 754 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 814 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 874 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 875 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 934 Query: 533 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 592 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 935 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 994 Query: 593 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 | |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 995 ccatgggggataagcttcatcgtccagagggaaacagcccggatcaccag 1044 Score = 230 bits (116), Expect = 5e-57 Identities = 151/162 (93%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 460 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 461 tgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccccatcggggagtga 520 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 162 |||| ||| |||||||| | |||||||||||||||||||| Sbjct: 521 aataaaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 729 bits (368), Expect = 0.0 Identities = 419/436 (96%), Gaps = 5/436 (1%) Strand = Plus / Plus Query: 207 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 266 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 267 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 326 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 327 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 386 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 766 Query: 387 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 826 Query: 447 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 886 Query: 507 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaata 566 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 887 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaata 946 Query: 567 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 626 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 acaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 1006 Query: 627 cagcccggatcaccag 642 |||||||||||||||| Sbjct: 1007 cagcccggatcaccag 1022 Score = 230 bits (116), Expect = 5e-57 Identities = 151/162 (93%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 460 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 461 tgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatcggggagtga 520 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 162 |||| ||| |||||||| | |||||||||||||||||||| Sbjct: 521 aataaaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 724 bits (365), Expect = 0.0 Identities = 395/405 (97%) Strand = Plus / Plus Query: 238 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 297 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 298 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 357 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 358 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 781 Query: 418 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 841 Query: 478 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 537 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 842 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 901 Query: 538 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 597 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 902 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 961 Query: 598 ggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 ggggataagcttcatcgtcgagagggaaacagcccggatcaccag 1006 Score = 218 bits (110), Expect = 2e-53 Identities = 155/168 (92%), Gaps = 4/168 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 460 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||| Sbjct: 461 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtga 519 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 168 |||| ||| |||||||| | ||||| |||||||||||||| ||||| Sbjct: 520 aataaaacatgaaaccg---taagctctcaagcagtgggaggagaaag 564
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 712 bits (359), Expect = 0.0 Identities = 442/470 (94%), Gaps = 11/470 (2%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgag 935 Query: 533 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 592 |||||||||||||||||||||||||| | |||||||| ||||||||||| ||||| Sbjct: 936 gcaaactctgaatactagatatgacc------tcacaggggttaaggtcggccaatgaga 989 Query: 593 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 990 cgatgggggataagcttcatcttccagagggaaacagcccggatcaccag 1039 Score = 230 bits (116), Expect = 5e-57 Identities = 151/162 (93%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 460 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||| ||||||||||||| ||||||||||||||||| || ||||| Sbjct: 461 tgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccccatccgggagtga 520 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 162 |||||||| |||||||| | |||||||||||||||||||| Sbjct: 521 aatagaacatgaaaccg---taagctcccaagcagtgggagg 559
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 706 bits (356), Expect = 0.0 Identities = 575/645 (89%), Gaps = 11/645 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||| |||||||| |||||||||| | ||||||||||||| ||||| Sbjct: 138874 ggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctggg 138815 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 138814 tgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 138755 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| ||||||| |||||||||||| ||| ||||||||||| Sbjct: 138754 aatagaacatgaaaccgta---agctcccgagcagtgggaggagaattggatctctgacc 138698 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| |||||| | ||| ||||||||||||| Sbjct: 138697 gcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaagggaac--- 138641 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||| | |||| ||||||||||||| Sbjct: 138640 --ccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatggacc 138583 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||| ||||||||||||||||||||||||||||||||||| ||| | | ||||||| Sbjct: 138582 cgaacccgggtgatctatccatgaccaggatgaagcttggatagaaccaggtggaggtcc 138523 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138522 gaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtgaaatgccactcg 138463 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact-ggacat 479 ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| || | Sbjct: 138462 aacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactaggctac 138403 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 || | |||||||||||||| |||||||||||||| |||| |||||||| ||||||||||| Sbjct: 138402 ctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaact 138343 Query: 540 ctgaatactagatatgacccaaaaataaca--ggggtcaaggtcggccagtgagacgatg 597 ||||||||| | |||| ||| | | | ||| |||| ||||||||||||||||||| || Sbjct: 138342 ctgaatactgggtatggccccagagtcacacgagggtgaaggtcggccagtgagacggtg 138283 Query: 598 ggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 138282 ggggataagcttcaccgtcgagaggggaacagcccagatcaccag 138238 Score = 706 bits (356), Expect = 0.0 Identities = 575/645 (89%), Gaps = 11/645 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||| |||||||| |||||||||| | ||||||||||||| ||||| Sbjct: 83003 ggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctggg 83062 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 83063 tgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 83122 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| ||||||| |||||||||||| ||| ||||||||||| Sbjct: 83123 aatagaacatgaaaccgta---agctcccgagcagtgggaggagaattggatctctgacc 83179 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| |||||| | ||| ||||||||||||| Sbjct: 83180 gcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaagggaac--- 83236 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||| | |||| ||||||||||||| Sbjct: 83237 --ccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatggacc 83294 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||| ||||||||||||||||||||||||||||||||||| ||| | | ||||||| Sbjct: 83295 cgaacccgggtgatctatccatgaccaggatgaagcttggatagaaccaggtggaggtcc 83354 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 83355 gaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtgaaatgccactcg 83414 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact-ggacat 479 ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| || | Sbjct: 83415 aacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactaggctac 83474 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 || | |||||||||||||| |||||||||||||| |||| |||||||| ||||||||||| Sbjct: 83475 ctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaact 83534 Query: 540 ctgaatactagatatgacccaaaaataaca--ggggtcaaggtcggccagtgagacgatg 597 ||||||||| | |||| ||| | | | ||| |||| ||||||||||||||||||| || Sbjct: 83535 ctgaatactgggtatggccccagagtcacacgagggtgaaggtcggccagtgagacggtg 83594 Query: 598 ggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 83595 ggggataagcttcaccgtcgagaggggaacagcccagatcaccag 83639
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 702 bits (354), Expect = 0.0 Identities = 500/544 (91%), Gaps = 6/544 (1%) Strand = Plus / Plus Query: 10 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 69 |||||||||||||||||| |||||||||||| ||||||||||| ||||| |||||||||| Sbjct: 144322 aatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgata 144381 Query: 70 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 129 |||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 144382 gcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaaca 144441 Query: 130 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 189 |||||||| | |||||||||||||||||||| ||| | ||||||| |||||||||||| Sbjct: 144442 tgaaaccgcg---agctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctg 144498 Query: 190 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 249 ||||||||||||||||||||| ||||| ||||| ||||||||| | ||||| |||| Sbjct: 144499 ttgaagaatgagccggcgacttgtaggcggtggcccggttaagggggag-aaccc-ccgg 144556 Query: 250 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 309 |||||||||||||||||||||| | |||| |||||||| |||||| |||||||||||| Sbjct: 144557 agccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaacctgg 144616 Query: 310 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 369 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 144617 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 144676 Query: 370 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 429 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144677 gatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 144736 Query: 430 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggta 488 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 144737 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggta 144796 Query: 489 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 548 |||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 144797 aagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 144856 Query: 549 agat 552 |||| Sbjct: 144857 agat 144860 Score = 702 bits (354), Expect = 0.0 Identities = 500/544 (91%), Gaps = 6/544 (1%) Strand = Plus / Minus Query: 10 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 69 |||||||||||||||||| |||||||||||| ||||||||||| ||||| |||||||||| Sbjct: 88529 aatcccgtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgata 88470 Query: 70 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 129 |||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 88469 gcgaagcagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaaca 88410 Query: 130 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 189 |||||||| | |||||||||||||||||||| ||| | ||||||| |||||||||||| Sbjct: 88409 tgaaaccgcg---agctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctg 88353 Query: 190 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 249 ||||||||||||||||||||| ||||| ||||| ||||||||| | ||||| |||| Sbjct: 88352 ttgaagaatgagccggcgacttgtaggcggtggcccggttaagggggag-aaccc-ccgg 88295 Query: 250 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 309 |||||||||||||||||||||| | |||| |||||||| |||||| |||||||||||| Sbjct: 88294 agccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaacctgg 88235 Query: 310 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 369 ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 88234 gtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgact 88175 Query: 370 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 429 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88174 gatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 88115 Query: 430 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggta 488 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 88114 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggta 88055 Query: 489 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 548 |||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 88054 aagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatact 87995 Query: 549 agat 552 |||| Sbjct: 87994 agat 87991 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||| ||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccag 144957 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||| ||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccag 87894
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 700 bits (353), Expect = 0.0 Identities = 433/458 (94%), Gaps = 10/458 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 427 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 428 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 487 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | || | |||||||| Sbjct: 488 aatagaacatgaaaccgta---agctcccaagcagtgggaggagccaggg--ctctgacc 542 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 543 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 599 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 600 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 657 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 658 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 717 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 777 Query: 421 aacccagagctagctggttctccccgaaatgcgttgag 458 |||||||||||||||||||||||||||||||||||||| Sbjct: 778 aacccagagctagctggttctccccgaaatgcgttgag 815
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 666 bits (336), Expect = 0.0 Identities = 411/432 (95%), Gaps = 8/432 (1%) Strand = Plus / Plus Query: 213 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 271 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 272 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 329 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 330 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 389 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 788 Query: 390 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc-gaa 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 789 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaa 848 Query: 449 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 908 Query: 509 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 568 | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 909 ccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataac 968 Query: 569 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 628 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 aagggtcaaggtcggcaagtgagacgatgggggataagcttcatcgtcgagagggaaaca 1028 Query: 629 gcccggatcacc 640 |||| ||||||| Sbjct: 1029 gccctgatcacc 1040 Score = 153 bits (77), Expect = 8e-34 Identities = 102/108 (94%), Gaps = 3/108 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 390 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactac--gg 447 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 108 |||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 448 tgaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 666 bits (336), Expect = 0.0 Identities = 500/551 (90%), Gaps = 9/551 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||||| |||||||||| | ||||||||||||||||||| Sbjct: 393 ggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctggg 452 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 453 tgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 512 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| ||| ||||||||||||||| ||| | |||||||||| Sbjct: 513 aatagaacatgaaaccgta---agcctccaagcagtgggaggagaatggaatctctgacc 569 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| |||||||||||| ||||||||| | || Sbjct: 570 gcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaaggcga--ga 627 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 | || |||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 628 agcc---ggagccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacc 684 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||| |||||||||| ||||| ||||| |||||||||| |||| | ||| ||||||| Sbjct: 685 cgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtcc 744 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 745 gaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcg 804 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 ||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 805 aactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgc 864 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 865 ctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaact 924 Query: 540 ctgaatactag 550 ||||||||||| Sbjct: 925 ctgaatactag 935 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 578 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 637 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 638 accag 642 ||||| Sbjct: 1006 accag 1010
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 666 bits (336), Expect = 0.0 Identities = 500/551 (90%), Gaps = 9/551 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||||| |||||||||| | ||||||||||||||||||| Sbjct: 406 ggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctggg 465 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 466 tgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 525 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| ||| ||||||||||||||| ||| | |||||||||| Sbjct: 526 aatagaacatgaaaccgta---agcctccaagcagtgggaggagaatggaatctctgacc 582 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| |||||||||||| ||||||||| | || Sbjct: 583 gcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaaggcga--ga 640 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 | || |||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 641 agcc---ggagccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacc 697 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||| |||||||||| ||||| ||||| |||||||||| |||| | ||| ||||||| Sbjct: 698 cgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtcc 757 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 758 gaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcg 817 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 ||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 818 aactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgc 877 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 878 ctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaact 937 Query: 540 ctgaatactag 550 ||||||||||| Sbjct: 938 ctgaatactag 948 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 578 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 637 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 638 accag 642 ||||| Sbjct: 1019 accag 1023
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 662 bits (334), Expect = 0.0 Identities = 501/552 (90%), Gaps = 11/552 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||||| |||||||||| | ||||||||||||||||||| Sbjct: 510 ggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctggg 569 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 570 tgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 629 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| |||||||| | ||| ||||||||||||||| ||| | |||||||||| Sbjct: 630 aatagaacatgaaaccg---taagcctccaagcagtgggaggagaatggaatctctgacc 686 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg-g 239 |||||||||||||||||||||||||||||| |||||||||||| ||||||||| || | Sbjct: 687 gcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagg---cgtg 743 Query: 240 aacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 299 || || |||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 744 aagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggac 800 Query: 300 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 359 ||||||| |||||||||| ||||| ||||| |||||||||| |||| | ||| |||||| Sbjct: 801 ccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtc 860 Query: 360 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 419 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 861 cgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactc 920 Query: 420 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-a 478 |||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 921 gaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactg 980 Query: 479 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 538 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 981 cctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaac 1040 Query: 539 tctgaatactag 550 |||||||||||| Sbjct: 1041 tctgaatactag 1052 Score = 81.8 bits (41), Expect = 3e-12 Identities = 59/65 (90%) Strand = Plus / Plus Query: 578 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 637 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 638 accag 642 ||||| Sbjct: 1123 accag 1127
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 654 bits (330), Expect = 0.0 Identities = 333/334 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 295 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 354 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 355 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 414 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 415 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 474 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 475 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 534 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 535 acccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacc 594 Query: 301 cgaacctgggtgatctatccatgaccaggatgaa 334 |||||||||||||||||||||||||||||||||| Sbjct: 595 cgaacctgggtgatctatccatgaccaggatgaa 628
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 634 bits (320), Expect = e-179 Identities = 413/442 (93%), Gaps = 9/442 (2%) Strand = Plus / Plus Query: 80 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 139 |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta 60 Query: 140 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 199 || ||||||||||||||||| || | | ||||||||||||||||||||||||||| Sbjct: 61 ---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatg 116 Query: 200 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 259 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 117 agccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcg 171 Query: 260 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatc 319 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 172 aaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatc 231 Query: 320 catgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaag 379 ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 232 catgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaag 291 Query: 380 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 aatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggtt 351 Query: 440 ctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgttt 499 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 352 ctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgttt 411 Query: 500 cggtgcgggctgcgcgagcggt 521 |||||||||| ||| ||||||| Sbjct: 412 cggtgcgggccgcgagagcggt 433
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 628 bits (317), Expect = e-177 Identities = 499/555 (89%), Gaps = 11/555 (1%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 414 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcttgggtg 473 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 ||| |||| ||||||||||| |||||||| ||||||||||||||| | |||| ||||||| Sbjct: 474 accaatagtgaagtagtaccatgagggaagggtgaaaagaacccctattggggagtgaaa 533 Query: 123 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 182 |||||| ||||| | | |||| ||||||||||||||| | || | |||||||||| Sbjct: 534 tagaacatgaaaacata---agctaccaagcagtgggaggagccaggg--ctctgaccgc 588 Query: 183 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 242 |||||||||||||||||||||||||||||||| | |||||| ||||||||| |||| Sbjct: 589 gtgcctgttgaagaatgagccggcgactcataagtagtggcctggttaagg----ggaa- 643 Query: 243 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 302 ||||||||||| |||||||||| |||||| ||||||| | ||||| |||||||| ||||| Sbjct: 644 ccaccggagccatagcgaaagcaagtcttcatagggcaaatgtcattgcttatgtacccg 703 Query: 303 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 362 ||| ||||||||||| |||||||||||||||| |||| |||||||||| ||||||||| Sbjct: 704 aacttgggtgatctaaccatgaccaggatgaaatttggttgaaactaagtggaggtccga 763 Query: 363 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 764 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcgaa 823 Query: 423 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta 482 |||| |||||||||||||||||||||||||||| ||| ||||||||| || ||||||||| Sbjct: 824 cccaaagctagctggttctccccgaaatgcgtttaggggcagcagtt-accggacatcta 882 Query: 483 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 542 |||||||||||||||||||||||||| || |||||||||||||| |||||||||| || Sbjct: 883 ggggtaaagcactgtttcggtgcgggtctcgagagcggtaccaaattgaggcaaactatg 942 Query: 543 aatactagatatgac 557 ||||||||||||||| Sbjct: 943 aatactagatatgac 957 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Plus Query: 582 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 641 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 642 g 642 | Sbjct: 1060 g 1060
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 624 bits (315), Expect = e-176 Identities = 493/549 (89%), Gaps = 10/549 (1%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| |||||||||||||||||| |||||||||| | ||||||||||||||||||||| Sbjct: 397 cacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgggtg 456 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 |||||||| |||| ||||||| ||||||||||||||||||||||||| ||| ||||||| Sbjct: 457 accgatagagaagaagtaccgcgagggaaaggtgaaaagaacccccatcggggagtgaaa 516 Query: 123 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 182 |||||| ||||| ||| |||| |||||||||||||| ||| |||||||||||| Sbjct: 517 tagaacatgaaatcgta---agctttcaagcagtgggaggagaattcaatctctgaccgc 573 Query: 183 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 242 |||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 574 gtgcctgttgaagaatgagccggcgacttataggcagtggcgtggttaagggaatt---- 629 Query: 243 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 302 ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 630 -caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccg 687 Query: 303 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 362 |||| |||||||||||||||| |||||||||||||||| |||||| ||| ||||||||| Sbjct: 688 aacccgggtgatctatccatggccaggatgaagcttgggtgaaaccaagtggaggtccga 747 Query: 363 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 422 |||||||||||||||| |||||||||||||| ||||||||| |||||||| ||| ||||| Sbjct: 748 accgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaa 807 Query: 423 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atct 481 | | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | || Sbjct: 808 ctcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcct 867 Query: 482 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 541 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 868 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactct 927 Query: 542 gaatactag 550 ||||||||| Sbjct: 928 gaatactag 936 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 609 bits (307), Expect = e-171 Identities = 491/549 (89%), Gaps = 10/549 (1%) Strand = Plus / Minus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| |||||||||||||||||| |||||||||| | ||||||||||||||||||||| Sbjct: 124868 cacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgggtg 124809 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 |||||||| |||| ||||||| ||||||||||||||||||||||||| ||| ||||||| Sbjct: 124808 accgatagagaagaagtaccgcgagggaaaggtgaaaagaacccccatcggggagtgaaa 124749 Query: 123 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 182 |||||| ||||| ||| |||| |||||||||||||| ||| |||||||||||| Sbjct: 124748 tagaacatgaaatcgta---agctttcaagcagtgggaggagaattcaatctctgaccgc 124692 Query: 183 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 242 |||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 124691 gtgcctgttgaagaatgagccggcgacttataggcagtggcgtggttaagggaatt---- 124636 Query: 243 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 302 ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 124635 -caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccg 124578 Query: 303 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 362 |||| |||||||||||||||| |||||||||||||||| |||| | ||| ||||||||| Sbjct: 124577 aacccgggtgatctatccatggccaggatgaagcttgggtgaagccaagtggaggtccga 124518 Query: 363 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 422 |||||||||||||||| |||||||||||||| ||||||||| |||||||| ||| ||||| Sbjct: 124517 accgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaa 124458 Query: 423 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atct 481 | | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | || Sbjct: 124457 ctcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcct 124398 Query: 482 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 541 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 124397 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactct 124338 Query: 542 gaatactag 550 ||||||||| Sbjct: 124337 gaatactag 124329 Score = 609 bits (307), Expect = e-171 Identities = 491/549 (89%), Gaps = 10/549 (1%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| |||||||||||||||||| |||||||||| | ||||||||||||||||||||| Sbjct: 94998 cacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgggtg 95057 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 |||||||| |||| ||||||| ||||||||||||||||||||||||| ||| ||||||| Sbjct: 95058 accgatagagaagaagtaccgcgagggaaaggtgaaaagaacccccatcggggagtgaaa 95117 Query: 123 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 182 |||||| ||||| ||| |||| |||||||||||||| ||| |||||||||||| Sbjct: 95118 tagaacatgaaatcgta---agctttcaagcagtgggaggagaattcaatctctgaccgc 95174 Query: 183 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 242 |||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 95175 gtgcctgttgaagaatgagccggcgacttataggcagtggcgtggttaagggaatt---- 95230 Query: 243 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 302 ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 95231 -caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccg 95288 Query: 303 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 362 |||| |||||||||||||||| |||||||||||||||| |||| | ||| ||||||||| Sbjct: 95289 aacccgggtgatctatccatggccaggatgaagcttgggtgaagccaagtggaggtccga 95348 Query: 363 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 422 |||||||||||||||| |||||||||||||| ||||||||| |||||||| ||| ||||| Sbjct: 95349 accgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaa 95408 Query: 423 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atct 481 | | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | || Sbjct: 95409 ctcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcct 95468 Query: 482 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 541 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 95469 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactct 95528 Query: 542 gaatactag 550 ||||||||| Sbjct: 95529 gaatactag 95537 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 589 bits (297), Expect = e-165 Identities = 396/426 (92%), Gaps = 11/426 (2%) Strand = Plus / Plus Query: 82 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 141 |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 1 cgtgagggaagggtgaaaagaaccc--atcggggagtgaaatagaacatgaaaccgta-- 56 Query: 142 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 201 || ||||||||||||||||| || | | ||||||||||||||||||||||||||||| Sbjct: 57 -agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgag 114 Query: 202 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 261 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 115 ccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaa 169 Query: 262 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 321 |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 agcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcca 229 Query: 322 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 381 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 230 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaa 289 Query: 382 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 290 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggctct 349 Query: 442 ccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcg 501 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 350 ccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcg 409 Query: 502 gtgcgg 507 |||||| Sbjct: 410 gtgcgg 415
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 587 bits (296), Expect = e-164 Identities = 492/554 (88%), Gaps = 10/554 (1%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| |||||| | |||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 397 cacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaatactcctgggtg 456 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 |||||||| |||| ||||||| ||||||||||||||||||||||||| ||| ||||||| Sbjct: 457 accgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccataggggagtgaaa 516 Query: 123 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 182 |||||| ||||||| | |||| |||||||||||||| | | | || ||||||| Sbjct: 517 tagaacatgaaaccata---agctttcaagcagtgggaggaggattgaacctttgaccgc 573 Query: 183 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 242 |||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 574 gtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaagggaat----- 628 Query: 243 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 302 |||||| |||| |||||||||| |||||| |||||||||||||||| ||||||||||| Sbjct: 629 ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttatggacccg 687 Query: 303 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 362 |||| ||||||||||||||||||||||||||||||||| | |||| ||| ||||||||| Sbjct: 688 aacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaagtggaggtccga 747 Query: 363 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 422 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 accgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 807 Query: 423 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atct 481 | | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | || | Sbjct: 808 ctcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggctattt 867 Query: 482 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 541 |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 868 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactct 927 Query: 542 gaatactagatatg 555 |||||||| ||||| Sbjct: 928 gaatactaaatatg 941 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 575 bits (290), Expect = e-161 Identities = 491/553 (88%), Gaps = 10/553 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| ||||||||||||||| || |||||||||| | ||| ||||||||||||||| Sbjct: 392 ggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagactaaatactcctggg 451 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 452 tgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 511 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||| |||||||||||||| | |||||||||||| Sbjct: 512 aatagaacatgaaaccgta---agcttacaagcagtgggaggaggttttgatctctgacc 568 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||| ||||||||||||||||||||| ||||||||||||| |||||||| | | | Sbjct: 569 gcgtgcctattgaagaatgagccggcgacttataggcagtggctaggttaaggta-caaa 627 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 | ||||||||| |||||||||||||||||||||||||||| ||||||| ||| |||| Sbjct: 628 a---accggagccatagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacc 683 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||| |||||||||| ||||| |||||||||||||| | ||||||| || || |||| Sbjct: 684 cgaacccgggtgatctaaccatggccaggatgaagctttggtgaaactcagtggaagtcc 743 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| ||| Sbjct: 744 gaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcg 803 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggaca 478 ||| | ||||||||||||||||||||||||||||||||||||||| |||| | || Sbjct: 804 aactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctt 863 Query: 479 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 538 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 864 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaac 923 Query: 539 tctgaatactaga 551 ||||||||||||| Sbjct: 924 tctgaatactaga 936 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccag 1010
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 575 bits (290), Expect = e-161 Identities = 491/553 (88%), Gaps = 10/553 (1%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| ||||||||||||||| || |||||||||| | ||| ||||||||||||||| Sbjct: 115270 ggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagactaaatactcctggg 115211 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 115210 tgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 115151 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||| |||||||||||||| | |||||||||||| Sbjct: 115150 aatagaacatgaaaccgta---agcttacaagcagtgggaggaggttttgatctctgacc 115094 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||| ||||||||||||||||||||| ||||||||||||| |||||||| | | | Sbjct: 115093 gcgtgcctattgaagaatgagccggcgacttataggcagtggctaggttaaggta-caaa 115035 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 | ||||||||| |||||||||||||||||||||||||||| ||||||| ||| |||| Sbjct: 115034 a---accggagccatagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacc 114979 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||| |||||||||| ||||| |||||||||||||| | ||||||| || || |||| Sbjct: 114978 cgaacccgggtgatctaaccatggccaggatgaagctttggtgaaactcagtggaagtcc 114919 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| ||| Sbjct: 114918 gaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcg 114859 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggaca 478 ||| | ||||||||||||||||||||||||||||||||||||||| |||| | || Sbjct: 114858 aactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctt 114799 Query: 479 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 538 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 114798 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaac 114739 Query: 539 tctgaatactaga 551 ||||||||||||| Sbjct: 114738 tctgaatactaga 114726 Score = 575 bits (290), Expect = e-161 Identities = 491/553 (88%), Gaps = 10/553 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| ||||||||||||||| || |||||||||| | ||| ||||||||||||||| Sbjct: 86718 ggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagactaaatactcctggg 86777 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 86778 tgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 86837 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||| |||||||||||||| | |||||||||||| Sbjct: 86838 aatagaacatgaaaccgta---agcttacaagcagtgggaggaggttttgatctctgacc 86894 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||| ||||||||||||||||||||| ||||||||||||| |||||||| | | | Sbjct: 86895 gcgtgcctattgaagaatgagccggcgacttataggcagtggctaggttaaggta-caaa 86953 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 | ||||||||| |||||||||||||||||||||||||||| ||||||| ||| |||| Sbjct: 86954 a---accggagccatagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacc 87009 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||| |||||||||| ||||| |||||||||||||| | ||||||| || || |||| Sbjct: 87010 cgaacccgggtgatctaaccatggccaggatgaagctttggtgaaactcagtggaagtcc 87069 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| ||| Sbjct: 87070 gaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcg 87129 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact--ggaca 478 ||| | ||||||||||||||||||||||||||||||||||||||| |||| | || Sbjct: 87130 aactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagggctt 87189 Query: 479 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 538 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 87190 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaac 87249 Query: 539 tctgaatactaga 551 ||||||||||||| Sbjct: 87250 tctgaatactaga 87262 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccag 114652 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccag 87336
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 563 bits (284), Expect = e-157 Identities = 490/556 (88%), Gaps = 12/556 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 ||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||| Sbjct: 352 ggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctggg 411 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 412 tgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccgtaggggagtga 471 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| ||| |||||||||||||| ||| |||||||||| Sbjct: 472 aatagaacatgaaaccgta---agcctacaagcagtgggaggagaatagaatctctgacc 528 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| ||| | |||||| |||||||| ||| Sbjct: 529 gcgtgcctgttgaagaatgagccggcgacttataagtagtggcctggttaagagaat--- 585 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 || ||||||||||||||||| |||| || | || || |||||||| |||| |||| Sbjct: 586 ----actggagccgtagcgaaagcaagtcatatttgg-cgcatgtcactgtttatagacc 640 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||| |||||||||||||||| ||||| |||| ||||| |||| | ||| ||||||| Sbjct: 641 cgaacccgggtgatctatccatggccagggtgaaacttgggtgaagccaagtggaggtcc 700 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 701 gaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcg 760 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 ||| | ||||||||||||||||||||||||||||||||||||||| |||| ||||| | Sbjct: 761 aactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattgattggactac 820 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 821 ttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaact 880 Query: 540 ctgaatactagatatg 555 ||||||||||| |||| Sbjct: 881 ctgaatactaggtatg 896 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 585 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcac 966
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 551 bits (278), Expect = e-153 Identities = 486/552 (88%), Gaps = 5/552 (0%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| ||||||||||||||| || |||||||||| ||||||||||||||| |||||| Sbjct: 403 cacgtgaaatcccgtgtgaatctgcgaggaccacctcgcaaggctaaatacttctgggta 462 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 |||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 463 accgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaa 522 Query: 123 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 182 ||||| ||||||||| ||| ||||||||||||| ||| | |||| ||||||| Sbjct: 523 aagaacatgaaaccgtag---gctttcaagcagtgggagaagaattttatctttgaccgc 579 Query: 183 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 242 ||||||||||||||||||||||||||||||||| ||||||| ||||||||||| | Sbjct: 580 gtgcctgttgaagaatgagccggcgactcatagatagtggctgggttaagggaatttatg 639 Query: 243 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 302 | || |||||| |||||||||| |||||| ||||| |||||||||| |||||||||| Sbjct: 640 c-actggagccatagcgaaagcaagtcttttcagggctattgtcactgtctatggacccg 698 Query: 303 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 362 |||| |||||||||| ||||| |||||||||||||||| |||||||||| ||||||| | Sbjct: 699 aacccgggtgatctaaccatggccaggatgaagcttgggtgaaactaagtggaggtccca 758 Query: 363 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 422 |||||| ||||||||| |||| ||||||||| ||||||||| |||||||||||||||||| Sbjct: 759 accgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaa 818 Query: 423 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atct 481 | | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||| Sbjct: 819 ctcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaactggactatcc 878 Query: 482 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 541 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 879 aggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagacaaactct 938 Query: 542 gaatactagata 553 ||||||| |||| Sbjct: 939 gaatactggata 950 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 586 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||| | |||||||||||| |||||| ||||||||||||||| || |||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccag 1023
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 543 bits (274), Expect = e-151 Identities = 476/540 (88%), Gaps = 5/540 (0%) Strand = Plus / Plus Query: 10 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 69 ||||| |||||||| || |||||||||| | |||||||||||||||||||| ||||||| Sbjct: 4448 aatcctgtgtgaatttgcgaggaccacctcgtaaggctaaatactcctgggtaaccgata 4507 Query: 70 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 129 ||||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||||| Sbjct: 4508 gcgaaaaagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaagagaaca 4567 Query: 130 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 189 ||||||||| || |||||||||||||| ||| |||| |||||||||||||| Sbjct: 4568 tgaaaccgtag---gccttcaagcagtgggaggagaattgtatctttgaccgcgtgcctg 4624 Query: 190 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 249 ||||||||||||||||||||||||||||||||||||||||||||||| | || ||||| Sbjct: 4625 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaaattatcc-accgg 4683 Query: 250 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 309 |||| |||||||||| |||||| |||||| |||||||||| |||||||||||||| || Sbjct: 4684 agccatagcgaaagcaagtctttttagggctattgtcactgtctatggacccgaacccgg 4743 Query: 310 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 369 |||||||| ||||| |||||||||||||||| | |||||||| ||||||| ||||||| Sbjct: 4744 gtgatctaaccatggccaggatgaagcttgggtaaaactaagtggaggtccaaaccgacc 4803 Query: 370 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 429 ||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||| | ||| Sbjct: 4804 gatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcggag 4863 Query: 430 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 488 ||||||||||||||||||||||||||||||||||||| || |||| || ||| ||||||| Sbjct: 4864 ctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggggta 4923 Query: 489 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 548 |||||||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 4924 aagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatact 4983 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 586 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||| | |||||||||||| |||||| | ||||||||||||| ||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccag 5061
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 543 bits (274), Expect = e-151 Identities = 476/540 (88%), Gaps = 5/540 (0%) Strand = Plus / Plus Query: 10 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 69 ||||| |||||||| || |||||||||| | |||||||||||||||||||| ||||||| Sbjct: 415 aatcctgtgtgaatttgcgaggaccacctcgtaaggctaaatactcctgggtaaccgata 474 Query: 70 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 129 ||||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||||| Sbjct: 475 gcgaaaaagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaagagaaca 534 Query: 130 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 189 ||||||||| || |||||||||||||| ||| |||| |||||||||||||| Sbjct: 535 tgaaaccgtag---gccttcaagcagtgggaggagaattgtatctttgaccgcgtgcctg 591 Query: 190 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 249 ||||||||||||||||||||||||||||||||||||||||||||||| | || ||||| Sbjct: 592 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaaattatcc-accgg 650 Query: 250 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 309 |||| |||||||||| |||||| |||||| |||||||||| |||||||||||||| || Sbjct: 651 agccatagcgaaagcaagtctttttagggctattgtcactgtctatggacccgaacccgg 710 Query: 310 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 369 |||||||| ||||| |||||||||||||||| | |||||||| ||||||| ||||||| Sbjct: 711 gtgatctaaccatggccaggatgaagcttgggtaaaactaagtggaggtccaaaccgacc 770 Query: 370 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 429 ||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||| | ||| Sbjct: 771 gatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcggag 830 Query: 430 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 488 ||||||||||||||||||||||||||||||||||||| || |||| || ||| ||||||| Sbjct: 831 ctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggggta 890 Query: 489 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 548 |||||||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 891 aagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatact 950 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 586 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||| | |||||||||||| |||||| | ||||||||||||| ||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccag 1028
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 543 bits (274), Expect = e-151 Identities = 476/540 (88%), Gaps = 5/540 (0%) Strand = Plus / Plus Query: 10 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 69 ||||| |||||||| || |||||||||| | |||||||||||||||||||| ||||||| Sbjct: 415 aatcctgtgtgaatttgcgaggaccacctcgtaaggctaaatactcctgggtaaccgata 474 Query: 70 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 129 ||||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||||| Sbjct: 475 gcgaaaaagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaagagaaca 534 Query: 130 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 189 ||||||||| || |||||||||||||| ||| |||| |||||||||||||| Sbjct: 535 tgaaaccgtag---gccttcaagcagtgggaggagaattgtatctttgaccgcgtgcctg 591 Query: 190 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 249 ||||||||||||||||||||||||||||||||||||||||||||||| | || ||||| Sbjct: 592 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaaattatcc-accgg 650 Query: 250 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 309 |||| |||||||||| |||||| |||||| |||||||||| |||||||||||||| || Sbjct: 651 agccatagcgaaagcaagtctttttagggctattgtcactgtctatggacccgaacccgg 710 Query: 310 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 369 |||||||| ||||| |||||||||||||||| | |||||||| ||||||| ||||||| Sbjct: 711 gtgatctaaccatggccaggatgaagcttgggtaaaactaagtggaggtccaaaccgacc 770 Query: 370 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 429 ||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||| | ||| Sbjct: 771 gatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcggag 830 Query: 430 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 488 ||||||||||||||||||||||||||||||||||||| || |||| || ||| ||||||| Sbjct: 831 ctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggggta 890 Query: 489 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 548 |||||||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 891 aagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatact 950 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 586 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||| | |||||||||||| |||||| | ||||||||||||| ||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccag 1028
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 523 bits (264), Expect = e-145 Identities = 423/472 (89%), Gaps = 8/472 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 ||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaagt 740 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 800 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 |||| || |||||| |||||| ||||||||||||||||||||| |||||||| |||| || Sbjct: 801 gccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt-ac 859 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||||||||||||||||||||||||||||| |||| ||| |||| ||||||||| ||| Sbjct: 860 cagacatctaggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattgag 919 Query: 533 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 590 ||||||| ||||||||||||||||| ||||||||||||||| | ||||| | ||||||| Sbjct: 920 gcaaactatgaatactagatatgacctccaaaaataacagggataaaggtggaccagtga 979 Query: 591 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||| ||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 980 gaccatgggggataagcttcatcgtcgagaggggaacagcccagatcaccag 1031 Score = 182 bits (92), Expect = 9e-43 Identities = 122/132 (92%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 401 cacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatactcttgggtg 460 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 ||| |||| |||||||||||||||||||| ||||||||||||| | | |||| ||||||| Sbjct: 461 accaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactggggagtgaaa 520 Query: 123 tagaacgtgaaa 134 |||||| ||||| Sbjct: 521 tagaacatgaaa 532
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 517 bits (261), Expect = e-143 Identities = 484/557 (86%), Gaps = 11/557 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| || | ||||||||||||| |||||||||| | |||||||||||||||| || Sbjct: 799 ggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctagg 858 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||| |||||| |||| ||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 859 tgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccataggggagtga 918 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||| ||||||||| |||| ||||||||||||| ||| | |||| ||||| Sbjct: 919 aatagactatgaaaccgta---agcttacaagcagtgggagaagaatctaatctttgacc 975 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| ||| |||||||| |||||||||| | Sbjct: 976 gcgtgcctgttgaagaatgagccggcgacttataagcagtggcctggttaagggtat--- 1032 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 |||| |||||||||||||||||||| | |||||| |||||||| ||||||||| Sbjct: 1033 ----accgaagccgtagcgaaagcgagtcattcaagggcgcatgtcactgtttatggacc 1088 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||| |||||||||||||||| ||||| |||||||||| |||| | ||| |||| || Sbjct: 1089 cgaacccgggtgatctatccatggccagggtgaagcttgggtgaagccaagtggaggccc 1148 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||||| ||||||| || ||||||||||| |||||||||||||||||||||||||| Sbjct: 1149 gaaccgactggtgttgaaaaaccagcggatgagctgtggttaggggtgaaatgccactcg 1208 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-at 479 ||| | ||||||||||||||||||||||||||||||||||||||| |||||| || | Sbjct: 1209 aactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattgactaaactgt 1268 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1269 ttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaact 1328 Query: 540 ctgaatactagatatga 556 |||||||||||| |||| Sbjct: 1329 ctgaatactagacatga 1345 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 585 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccag 1415
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 517 bits (261), Expect = e-143 Identities = 482/551 (87%), Gaps = 11/551 (1%) Strand = Plus / Plus Query: 7 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 66 |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 393 tggaatcccgtgtgaatcagcaaggaccaccttgaaaggctaaatactcttgggtgacca 452 Query: 67 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 126 |||| |||||||||||||||||||| ||||||||||||||||| |||| |||||| |||| Sbjct: 453 atagtgaagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaactaga 512 Query: 127 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 186 || ||||| | | ||| ||||||||||||||| || || | |||||||| ||||| Sbjct: 513 acatgaaaacatat---gctaccaagcagtgggaggagacaggg--ctctgaccacgtgc 567 Query: 187 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 246 | ||||||||||||| |||||||||||| | |||||| ||||||||| |||| |||| Sbjct: 568 ccgttgaagaatgagtcggcgactcataagtagtggcctggttaagg----ggaa-ccac 622 Query: 247 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 306 ||||||| |||||||||| |||||| |||||| | ||||| ||||| ||||||||||| Sbjct: 623 cggagccatagcgaaagcaagtcttcatagggaaaatgtcattgcttgtggacccgaact 682 Query: 307 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 366 ||||||||||| |||||||||||||| | |||| | |||||||| | |||| |||||| Sbjct: 683 tgggtgatctaaccatgaccaggatgcaatttggttaaaactaagtgggggtctgaaccg 742 Query: 367 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 426 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 743 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccca 802 Query: 427 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 486 ||||||||||||| ||||||||||| || ||||||||||||| || || |||||||||| Sbjct: 803 aagctagctggttcgccccgaaatgcatttaggcgcagcagtt-accgggcatctagggg 861 Query: 487 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 546 ||||||| ||||| |||||||| || |||||||||||||| |||||| ||| |||||| Sbjct: 862 taaagcattgttttggtgcgggtcacgagagcggtaccaaattgaggcagactatgaata 921 Query: 547 ctagatatgac 557 ||||||||||| Sbjct: 922 ctagatatgac 932 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 560 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 619 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 620 agggaaaca 628 |||| |||| Sbjct: 1004 aggggaaca 1012
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 496 bits (250), Expect = e-137 Identities = 334/360 (92%), Gaps = 9/360 (2%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 292 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 291 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 232 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||||||||||||||||||| | | | |||||||| Sbjct: 231 aatagaacatgaaaccgta---agctcccaagcagtgggaggagcccgggg-ctctgacc 176 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac--- 119 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 118 --ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacc 61 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct: 60 cgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtcc 1
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 235 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 236 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 295 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 296 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 355 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 740 Query: 356 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 415 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 416 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 475 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 476 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 534 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 535 aaactctgaatactagatatg 555 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 186 bits (94), Expect = 6e-44 Identities = 124/134 (92%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 397 cacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaatactcctgggtg 456 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 |||||||| |||| ||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 457 accgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaa 516 Query: 123 tagaacgtgaaacc 136 |||||| ||||||| Sbjct: 517 tagaacatgaaacc 530 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 235 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 236 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 295 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 296 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 355 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 3715 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 3774 Query: 356 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 415 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3775 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 3834 Query: 416 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 475 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 3835 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 3894 Query: 476 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 534 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 3895 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 3954 Query: 535 aaactctgaatactagatatg 555 ||||||||||||||| ||||| Sbjct: 3955 aaactctgaatactaaatatg 3975 Score = 186 bits (94), Expect = 6e-44 Identities = 124/134 (92%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 3431 cacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaatactcctgggtg 3490 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 |||||||| |||| ||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 3491 accgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaa 3550 Query: 123 tagaacgtgaaacc 136 |||||| ||||||| Sbjct: 3551 tagaacatgaaacc 3564 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 472 bits (238), Expect = e-130 Identities = 238/238 (100%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 448 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 508 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 568 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 626
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 462 bits (233), Expect = e-127 Identities = 236/237 (99%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 408 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 468 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 469 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaattgatctctgacc 528 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 237 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 529 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 585
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 454 bits (229), Expect = e-124 Identities = 229/229 (100%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 321 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 322 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 381 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 441 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 229 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 490
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 444 bits (224), Expect = e-121 Identities = 310/338 (91%), Gaps = 8/338 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2438 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctggg 2497 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 2498 tgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtga 2557 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| |||||||| | |||||||||||||||||||| ||| |||||||||| Sbjct: 2558 aatagaacatgaaaccg---taagctcccaagcagtgggaggagaatcgaatctctgacc 2614 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||| Sbjct: 2615 gcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaag-----gga 2669 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 ||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| Sbjct: 2670 acccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacc 2729 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagctt 338 ||||||||||||||||| |||||||||||||||||||| Sbjct: 2730 cgaacctgggtgatctaaccatgaccaggatgaagctt 2767
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 428 bits (216), Expect = e-116 Identities = 476/556 (85%), Gaps = 15/556 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||||| |||||||||| | ||||||||||||||||||| Sbjct: 369 ggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctggg 428 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacccccagtgggtagtg 119 | |||||||| ||||||||||||||||||||||||||||| ||||||| | ||| |||| Sbjct: 429 taaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacccctggaggggagtg 488 Query: 120 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 179 ||| ||||| ||||||| || |||| |||||||||||||| | | | |||||| Sbjct: 489 aaaaagaacatgaaacc---ctaagctgacaagcagtgggagg--acttttaagtctgac 543 Query: 180 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 239 |||||||||||||||||||||||||||||||| || | ||||||||||||||||| || Sbjct: 544 cgcgtgcctgttgaagaatgagccggcgactcctaagaagtggcttggttaaggg---gg 600 Query: 240 aacccaccggagccgtagcgaaagcgagtcttaatagggcga--ttgtcactgcttatgg 297 | | ||| |||| ||||||||| ||||| |||||||| | | |||||| ||| || Sbjct: 601 attac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaatcgtcactttttaggg 659 Query: 298 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 357 ||||||||| |||||||||| ||||| |||||||||||||||| | |||| ||| |||| Sbjct: 660 acccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaagtggagg 719 Query: 358 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 417 ||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||||| Sbjct: 720 tccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatgccaa 779 Query: 418 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactg 474 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| ||| | Sbjct: 780 tcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggcgacgg 839 Query: 475 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 534 | |||||||||||||||||||||||||||||||| || || |||||||||||| || Sbjct: 840 gctgtctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgtagc 899 Query: 535 aaactctgaatactag 550 ||||| ||||||||| Sbjct: 900 aaactaagaatactag 915 Score = 69.9 bits (35), Expect = 1e-08 Identities = 50/55 (90%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 638 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatca 987
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 420 bits (212), Expect = e-114 Identities = 267/284 (94%), Gaps = 6/284 (2%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 231 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 232 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 291 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 292 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 351 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 194 Query: 352 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 254 Query: 412 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 455 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 298 Score = 297 bits (150), Expect = 2e-77 Identities = 165/170 (97%) Strand = Plus / Plus Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 533 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 592 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 593 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 486
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 391 bits (197), Expect = e-105 Identities = 288/317 (90%), Gaps = 1/317 (0%) Strand = Plus / Minus Query: 326 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 385 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 386 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 445 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 446 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 505 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 506 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 565 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 566 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 625 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 626 acagcccggatcaccag 642 ||| || |||||||||| Sbjct: 2812 acaacctggatcaccag 2796 Score = 157 bits (79), Expect = 5e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 293 tatggacccgaacct 307 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 53 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 112 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 113 ggtagtgaaatagaacgtgaaacc 136 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 79.8 bits (40), Expect = 1e-11 Identities = 43/44 (97%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 44 ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 3421 ggcacgtggaatcccgtgtgaattagcaaggaccaccttgcaag 3378
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 377 bits (190), Expect = e-101 Identities = 336/381 (88%), Gaps = 9/381 (2%) Strand = Plus / Plus Query: 175 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 234 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 235 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 292 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 745 tatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagt 804 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 805 ggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaat 864 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga- 471 |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 865 gccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgat 924 Query: 472 -ctg-gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 529 || | ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 925 gttgagctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 984 Query: 530 gaggcaaactctgaatactag 550 | ||||||| ||||||||| Sbjct: 985 gtagcaaactaagaatactag 1005 Score = 157 bits (79), Expect = 5e-35 Identities = 125/139 (89%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||| | |||||||||| | ||||||||||||||||| | Sbjct: 460 ggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggctaaatactcctgag 519 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacccccagtgggtagtg 119 |||||||||||||| ||||||||||||||||||||| |||||| ||||| ||| |||| Sbjct: 520 tgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcccccgtagggaagtg 579 Query: 120 aaatagaacgtgaaaccgt 138 ||||||||| ||||||||| Sbjct: 580 aaatagaacatgaaaccgt 598 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 638 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatca 1077
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 375 bits (189), Expect = e-100 Identities = 402/469 (85%), Gaps = 8/469 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 533 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 590 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 591 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Score = 170 bits (86), Expect = 4e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 9 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 68 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 69 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 128 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 129 gtgaaa 134 ||||| Sbjct: 504 atgaaa 509
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 375 bits (189), Expect = e-100 Identities = 402/469 (85%), Gaps = 8/469 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 533 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 590 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 591 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Score = 170 bits (86), Expect = 4e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 9 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 68 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 69 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 128 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 129 gtgaaa 134 ||||| Sbjct: 504 atgaaa 509
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 375 bits (189), Expect = e-100 Identities = 402/469 (85%), Gaps = 8/469 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 533 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 590 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 591 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Score = 170 bits (86), Expect = 4e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 9 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 68 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 69 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 128 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 129 gtgaaa 134 ||||| Sbjct: 504 atgaaa 509
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 375 bits (189), Expect = e-100 Identities = 402/469 (85%), Gaps = 8/469 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 533 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 590 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 591 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Score = 163 bits (82), Expect = 9e-37 Identities = 115/126 (91%) Strand = Plus / Plus Query: 9 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 68 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 69 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 128 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 129 gtgaaa 134 ||||| Sbjct: 504 atgaaa 509
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 375 bits (189), Expect = e-100 Identities = 402/469 (85%), Gaps = 8/469 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 533 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 590 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 591 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Score = 170 bits (86), Expect = 4e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 9 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 68 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 69 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 128 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 129 gtgaaa 134 ||||| Sbjct: 504 atgaaa 509
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 375 bits (189), Expect = e-100 Identities = 402/469 (85%), Gaps = 8/469 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 533 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 590 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 591 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1003 Score = 170 bits (86), Expect = 4e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 9 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 68 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 69 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 128 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 129 gtgaaa 134 ||||| Sbjct: 503 atgaaa 508
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 375 bits (189), Expect = e-100 Identities = 402/469 (85%), Gaps = 8/469 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 533 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 590 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 591 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Score = 170 bits (86), Expect = 4e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 9 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 68 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 69 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 128 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 129 gtgaaa 134 ||||| Sbjct: 504 atgaaa 509
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 375 bits (189), Expect = e-100 Identities = 402/469 (85%), Gaps = 8/469 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 533 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 590 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 591 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Score = 170 bits (86), Expect = 4e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 9 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 68 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 69 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 128 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 129 gtgaaa 134 ||||| Sbjct: 504 atgaaa 509
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 375 bits (189), Expect = e-100 Identities = 402/469 (85%), Gaps = 8/469 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 533 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 590 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 591 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Score = 170 bits (86), Expect = 4e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 9 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 68 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 69 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 128 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 129 gtgaaa 134 ||||| Sbjct: 504 atgaaa 509
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 375 bits (189), Expect = e-100 Identities = 402/469 (85%), Gaps = 8/469 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 533 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 590 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 591 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Score = 170 bits (86), Expect = 4e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 9 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 68 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 69 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 128 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 129 gtgaaa 134 ||||| Sbjct: 504 atgaaa 509
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 375 bits (189), Expect = e-100 Identities = 402/469 (85%), Gaps = 8/469 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 533 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 590 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 591 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Score = 170 bits (86), Expect = 4e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 9 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 68 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 69 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 128 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 129 gtgaaa 134 ||||| Sbjct: 504 atgaaa 509
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 367 bits (185), Expect = 3e-98 Identities = 401/469 (85%), Gaps = 8/469 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 533 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 590 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 591 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1003 Score = 170 bits (86), Expect = 4e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 9 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 68 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 69 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 128 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 129 gtgaaa 134 ||||| Sbjct: 503 atgaaa 508
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 367 bits (185), Expect = 3e-98 Identities = 402/469 (85%), Gaps = 9/469 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gtt-ac 834 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 533 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 590 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 591 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1003 Score = 170 bits (86), Expect = 4e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 9 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 68 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 69 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 128 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 129 gtgaaa 134 ||||| Sbjct: 504 atgaaa 509
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 367 bits (185), Expect = 3e-98 Identities = 401/469 (85%), Gaps = 8/469 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 | || ||||||||| |||||||||||||||||||||||||||| ||||| || ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgtt-ac 835 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 533 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 590 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 591 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Score = 170 bits (86), Expect = 4e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 9 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 68 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 69 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 128 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 129 gtgaaa 134 ||||| Sbjct: 504 atgaaa 509
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 359 bits (181), Expect = 7e-96 Identities = 400/469 (85%), Gaps = 8/469 (1%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 233 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 292 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | | Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg-tatc 835 Query: 473 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 533 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 590 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 591 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Score = 170 bits (86), Expect = 4e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 9 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 68 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 69 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 128 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 129 gtgaaa 134 ||||| Sbjct: 504 atgaaa 509
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 353 bits (178), Expect = 5e-94 Identities = 311/353 (88%), Gaps = 3/353 (0%) Strand = Plus / Plus Query: 289 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 348 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 349 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 408 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 409 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 468 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 469 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 528 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 529 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 586 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 587 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcac 1004 Score = 170 bits (86), Expect = 4e-39 Identities = 116/126 (92%) Strand = Plus / Plus Query: 9 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 68 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 69 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 128 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 129 gtgaaa 134 ||||| Sbjct: 504 atgaaa 509 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 232 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 233 gg 234 || Sbjct: 602 gg 603
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 339 bits (171), Expect = 7e-90 Identities = 463/552 (83%), Gaps = 10/552 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||||| |||||||||| | ||||||||||| ||||| Sbjct: 2151 ggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatattcctgaa 2210 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| ||| ||||||| || |||||||||||||||||| | ||| ||||| Sbjct: 2211 tgaccgatagtgaaacagtaccgcgatttaaaggtgaaaagaaccccgggaggggagtga 2270 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| |||| |||||||||||||| | | | ||||||| Sbjct: 2271 aatagaacatgaaaccgta---agcttacaagcagtgggaggacgacttaacgtctgacc 2327 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg-gaacgg 239 ||||| ||||||||||||||||||||||| || |||||||| |||||||| | | | Sbjct: 2328 tcgtgcatgttgaagaatgagccggcgacttgtatgcagtggca-ggttaaggcgtaaag 2386 Query: 240 aacccaccggagccgtagcgaaagcgagtcttaatagg-gcgattgtcactgcttatgga 298 || ||||||||| ||| ||||||||| ||| ||| | ||| | ||||||| ||| || Sbjct: 2387 aat--accggagccatagtgaaagcgag-cttgataagagcgttcgtcactgtttacaga 2443 Query: 299 cccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggt 358 |||||||| || ||||||| |||| ||||| |||||||| | | | |||||| ||||| Sbjct: 2444 cccgaacccggatgatctagtcatggccagggtgaagcttaggtaacactaagtggaggt 2503 Query: 359 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 418 |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| | Sbjct: 2504 ccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaat 2563 Query: 419 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca 478 |||| || ||||||||||||||||||||||||||||| |||||||| ||||| | | Sbjct: 2564 cgaatccggagctagctggttctccccgaaatgcgttttggcgcagcggttgatgctata 2623 Query: 479 tc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 537 | ||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 2624 gcttaggggtaaagcactgtttcggtacgggctgtgaaagcggtaccaaatcgaggcaaa 2683 Query: 538 ctctgaatacta 549 |||||||||||| Sbjct: 2684 ctctgaatacta 2695 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || |||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccag 2767
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 337 bits (170), Expect = 3e-89 Identities = 329/379 (86%), Gaps = 6/379 (1%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 235 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 236 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 295 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 296 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 355 ||||||||||| |||||||||| |||||||||||||||||||| | | |||| || || Sbjct: 830 ggacccgaacccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggagtgga 889 Query: 356 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 415 |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 890 agtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 949 Query: 416 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tg 474 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || || Sbjct: 950 aatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtg 1009 Query: 475 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 533 | | ||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 1010 ggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtag 1069 Query: 534 caaactctgaatactagat 552 |||||| ||||||||||| Sbjct: 1070 caaactaagaatactagat 1088 Score = 149 bits (75), Expect = 1e-32 Identities = 124/139 (89%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| ||||||||||||||| | |||||||||| | ||||||||||||||||||| Sbjct: 541 ggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggctaaatactcctggg 600 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-gggtagtg 119 |||||||||| ||| |||||||| |||||||||||||||| | ||||||| ||| |||| Sbjct: 601 tgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaaccccagtcggggagtg 660 Query: 120 aaatagaacgtgaaaccgt 138 ||||||||| ||||||||| Sbjct: 661 aaatagaacatgaaaccgt 679 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccag 1161
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 337 bits (170), Expect = 3e-89 Identities = 278/311 (89%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 246 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 303 |||||||| ||||||||||||||| |||||||| || |||||| |||||||||||| Sbjct: 632 ccggagccaaagcgaaagcgagtctgaatagggcacttttgtcactttttatggacccga 691 Query: 304 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 363 ||| |||||||||| |||||||||||||||||||||| | |||| ||| |||||||||| Sbjct: 692 acccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaa 751 Query: 364 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 423 ||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 752 ccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaac 811 Query: 424 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-at 479 | ||||||||||||||||||||||||||||||||||||||| |||||| ||| | || Sbjct: 812 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctat 871 Query: 480 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 872 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaact 931 Query: 540 ctgaatactag 550 ||||||||| Sbjct: 932 aagaatactag 942 Score = 129 bits (65), Expect = 1e-26 Identities = 120/137 (87%), Gaps = 1/137 (0%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| |||||||||||||||| | |||||||||| | ||||||||||||||||| ||| Sbjct: 393 cacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggctaaatactcctgagtg 452 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacccccagtgggtagtgaa 121 ||| |||||||| |||||||| |||||||||||| ||||||||||| ||| |||||| Sbjct: 453 accaatagcgaaatagtaccgcgagggaaaggtgaaaaagaacccctgtaggggagtgaa 512 Query: 122 atagaacgtgaaaccgt 138 | ||||| ||||||||| Sbjct: 513 aaagaacatgaaaccgt 529 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccag 1018 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 233 ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgacttatagaaagtggcttggttaagg 623
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 81 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 140 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 141 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 200 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 201 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 107875
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 327 bits (165), Expect = 3e-86 Identities = 277/313 (88%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 245 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 304 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 305 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 364 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 365 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 424 |||||| ||||||| || || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 712 cgactggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaact 771 Query: 425 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctag 483 | ||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||| Sbjct: 772 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttag 831 Query: 484 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 543 |||||||||||||||||||||||||||| | | ||||||||||| || ||||||||||| Sbjct: 832 gggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctga 891 Query: 544 atactagatatga 556 |||||| |||||| Sbjct: 892 atactaaatatga 904 Score = 238 bits (120), Expect = 2e-59 Identities = 194/218 (88%), Gaps = 3/218 (1%) Strand = Plus / Plus Query: 16 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 75 |||||||||||| |||||||||| | ||||||||||||||||||||||||||||| |||| Sbjct: 373 gtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgggtgaccgatagtgaag 432 Query: 76 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 135 |||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||| Sbjct: 433 tagtaccgtgagggaaaggtgaaaagaacccccactggggagtgaaatagataatgaaac 492 Query: 136 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 195 || | ||| |||||||||||||| || | || |||||||||||||||||||||| Sbjct: 493 cg---taagcctacaagcagtgggaggaaaatataatttctgaccgcgtgcctgttgaag 549 Query: 196 aatgagccggcgactcataggcagtggcttggttaagg 233 ||||||||||||||| |||||||||||| ||||||||| Sbjct: 550 aatgagccggcgacttataggcagtggcctggttaagg 587 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 327 bits (165), Expect = 3e-86 Identities = 215/230 (93%), Gaps = 5/230 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 332 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 333 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 392 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 393 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 447 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 230 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 497
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 323 bits (163), Expect = 4e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Minus Query: 174 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 233 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 114870 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 114812 Query: 234 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 292 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 114811 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 114754 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 114753 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 114694 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 114693 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 114634 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 114633 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 114574 Query: 473 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 531 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 114573 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 114514 Query: 532 ggcaaactctgaatacta 549 |||||||||||||||||| Sbjct: 114513 ggcaaactctgaatacta 114496 Score = 323 bits (163), Expect = 4e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Plus Query: 174 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 233 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 2647 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 2705 Query: 234 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 292 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 2706 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 2763 Query: 293 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 352 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 2764 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 2823 Query: 353 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 412 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 2824 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 2883 Query: 413 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 472 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 2884 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 2943 Query: 473 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 531 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2944 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 3003 Query: 532 ggcaaactctgaatacta 549 |||||||||||||||||| Sbjct: 3004 ggcaaactctgaatacta 3021 Score = 125 bits (63), Expect = 2e-25 Identities = 121/139 (87%), Gaps = 1/139 (0%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| ||||||||||||||| || |||||||||| | ||||||||||| ||||| Sbjct: 115039 ggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggctaaatattcctgaa 114980 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-gggtagtg 119 |||||||||||| | ||||||||||||||||||||||||||||||| | ||| |||| Sbjct: 114979 tgaccgatagcgcaacagtaccgtgagggaaaggtgaaaagaaccccgggcaggggagtg 114920 Query: 120 aaatagaacgtgaaaccgt 138 |||||||| ||||||||| Sbjct: 114919 aaatagaatatgaaaccgt 114901 Score = 125 bits (63), Expect = 2e-25 Identities = 121/139 (87%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| ||||||||||||||| || |||||||||| | ||||||||||| ||||| Sbjct: 2478 ggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggctaaatattcctgaa 2537 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt-gggtagtg 119 |||||||||||| | ||||||||||||||||||||||||||||||| | ||| |||| Sbjct: 2538 tgaccgatagcgcaacagtaccgtgagggaaaggtgaaaagaaccccgggcaggggagtg 2597 Query: 120 aaatagaacgtgaaaccgt 138 |||||||| ||||||||| Sbjct: 2598 aaatagaatatgaaaccgt 2616 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 317 bits (160), Expect = 2e-83 Identities = 211/226 (93%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 116 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 117 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 176 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| |||||||| | |||||||||||||||||||||| | | |||||||| Sbjct: 177 aatagaacatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgacc 232 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 278
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 317 bits (160), Expect = 2e-83 Identities = 391/464 (84%), Gaps = 13/464 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 ||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||| | Sbjct: 385 ggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgag 444 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||| |||||||| |||||||||| ||||||||||||| | ||| ||||| Sbjct: 445 tgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaacccccggaggggagtga 504 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 ||||||||| |||||||| | ||| |||||||||||| |||| ||| ||||||| Sbjct: 505 aatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaagaagat-tctgacc 558 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| ||||| |||||||||||||||| | | Sbjct: 559 gcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaaggaa----a 614 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggc---gattgtcactgcttatgg 297 | |||||||| |||||||||||||||| |||||||| || |||||| ||||||| Sbjct: 615 ttcatccggagccatagcgaaagcgagtctgaatagggcattaatggtcacttcttatgg 674 Query: 298 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 357 ||||||||| || ||||||||||||| |||| |||||| | | | ||||| | ||| Sbjct: 675 acccgaaccgggatgatctatccatggccagattgaagcgttggtaaaacttcgtgaagg 734 Query: 358 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 417 ||||||||| ||||||||| |||| ||||||||||||||| ||| || ||||| || Sbjct: 735 atcgaaccgaccgatgttgaaaaatcggcggatgagttgtggatagcggagaaattccta 794 Query: 418 tcgaacccagagctagctggttctccccgaaatgcgttgaggcg 461 ||||| || ||||||||||| |||| ||||||| ||||||||| Sbjct: 795 tcgaatcccgagctagctggatctctccgaaatttgttgaggcg 838 Score = 52.0 bits (26), Expect = 0.002 Identities = 57/66 (86%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 483 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 541 |||||||||| || |||||||||||||||||| ||||||||||| ||| | | ||||| Sbjct: 862 ggggtaaagctaccgtttcggtgcgggctgcgaaagcggtaccaagtcgtgacgaactca 921 Query: 542 gaatac 547 |||||| Sbjct: 922 gaatac 927 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 618 agagggaaacagcccggatcaccag 642 ||||||||||||||| ||||||||| Sbjct: 982 agagggaaacagcccagatcaccag 1006
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 317 bits (160), Expect = 2e-83 Identities = 322/371 (86%), Gaps = 5/371 (1%) Strand = Plus / Plus Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| || | Sbjct: 2385 gcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaaggtaatg-- 2441 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggac 299 | || |||||| |||||||||||||| ||||||| ||| || |||||| |||| ||| Sbjct: 2442 atttactggagccatagcgaaagcgagttttaatagagcgtttagtcactatttatagac 2501 Query: 300 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 359 ||||||| |||||||||| ||||| ||||| |||||||| | | ||||||| |||| | Sbjct: 2502 ccgaacccgggtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcc 2561 Query: 360 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 419 |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| || Sbjct: 2562 cgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatc 2621 Query: 420 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggaca 478 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct: 2622 gaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataa 2681 Query: 479 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 538 | |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 2682 tttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaac 2741 Query: 539 tctgaatacta 549 ||||||||||| Sbjct: 2742 tctgaatacta 2752 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||||| |||||||||| | ||||||||||| ||||| Sbjct: 2206 ggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatattcctgaa 2265 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 100 |||||||||||| | |||||||||||||||||||||||| Sbjct: 2266 tgaccgatagcgtaacagtaccgtgagggaaaggtgaaaa 2305 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 596 tgggggataagcttcatcgtcgagagggaaacagcccggatcacca 641 ||||||||||||| ||| ||| ||||||||||||||| || ||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccacca 2823
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 315 bits (159), Expect = 1e-82 Identities = 174/179 (97%) Strand = Plus / Plus Query: 238 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 297 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 298 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 357 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 358 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 416 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 313 bits (158), Expect = 4e-82 Identities = 211/227 (92%), Gaps = 5/227 (2%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 222 ggcacgtggaatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctggg 163 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||| Sbjct: 162 tgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtga 103 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| |||||||| | |||||||||||||||||||| | || | |||||||| Sbjct: 102 aatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgacc 48 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 1
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 2e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 354 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 413 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 414 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 473 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 474 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 533 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 534 caaactctgaatactagatat 554 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 281 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 340 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 341 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 400 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 401 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 460 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 461 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 517 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 518 cggtaccaaatcgaggcaaactctgaatactaga 551 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 141 bits (71), Expect = 3e-30 Identities = 123/139 (88%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||||| |||||||||| | ||||||||||||| ||| Sbjct: 504 ggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatacttttgga 563 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacccccagtgggtagtg 119 |||||||||| ||| ||||||||||||||||||||| ||||||||||| ||| |||| Sbjct: 564 tgaccgatagtgaaatagtaccgtgagggaaaggtgaaaaagaacccctgtaggggagtg 623 Query: 120 aaatagaacgtgaaaccgt 138 ||||||||| ||||||||| Sbjct: 624 aaatagaacatgaaaccgt 642 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccag 1148 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 233 ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| Sbjct: 693 tgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaagg 750
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 297 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 356 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 357 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 416 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 417 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 475 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 476 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 534 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 535 aaactctgaatactagatatgac 557 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 121 bits (61), Expect = 3e-24 Identities = 94/105 (89%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| |||||||| |||||| || |||||||||| | |||||||||||||||| | || Sbjct: 6067 cacgtgaaatcccgtatgaatccgcgaggaccacctcgtaaggctaaatactcctagatg 6126 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 107 |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 6127 accgatagtgaaatagtaccgtgagggaatggtgaaaagaacccc 6171 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 175 ctgaccgcgtgcctgttgaagaatgagccggcgact 210 |||||||| ||||||||||||||||||||||||||| Sbjct: 6234 ctgaccgcatgcctgttgaagaatgagccggcgact 6269 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 586 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccag 6702 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 250 agccgtagcgaaagcgagtcttaatagggcgat 282 ||||||||| ||||||||||| ||||||||||| Sbjct: 6304 agccgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 297 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 356 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 357 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 416 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 417 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 475 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 476 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 534 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 535 aaactctgaatactagatatgac 557 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 121 bits (61), Expect = 3e-24 Identities = 94/105 (89%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| |||||||| |||||| || |||||||||| | |||||||||||||||| | || Sbjct: 3130 cacgtgaaatcccgtatgaatccgcgaggaccacctcgtaaggctaaatactcctagatg 3189 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 107 |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 3190 accgatagtgaaatagtaccgtgagggaatggtgaaaagaacccc 3234 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 175 ctgaccgcgtgcctgttgaagaatgagccggcgact 210 |||||||| ||||||||||||||||||||||||||| Sbjct: 3297 ctgaccgcatgcctgttgaagaatgagccggcgact 3332 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 586 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3765 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 250 agccgtagcgaaagcgagtcttaatagggcgat 282 ||||||||| ||||||||||| ||||||||||| Sbjct: 3367 agccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 297 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 356 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 357 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 416 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 417 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 475 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 476 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 534 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 535 aaactctgaatactagatatgac 557 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 121 bits (61), Expect = 3e-24 Identities = 94/105 (89%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| |||||||| |||||| || |||||||||| | |||||||||||||||| | || Sbjct: 418 cacgtgaaatcccgtatgaatccgcgaggaccacctcgtaaggctaaatactcctagatg 477 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 107 |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 478 accgatagtgaaatagtaccgtgagggaatggtgaaaagaacccc 522 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 175 ctgaccgcgtgcctgttgaagaatgagccggcgact 210 |||||||| ||||||||||||||||||||||||||| Sbjct: 585 ctgaccgcatgcctgttgaagaatgagccggcgact 620 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 586 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccag 1053 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 250 agccgtagcgaaagcgagtcttaatagggcgat 282 ||||||||| ||||||||||| ||||||||||| Sbjct: 655 agccgtagcaaaagcgagtctgaatagggcgat 687
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 295 bits (149), Expect = 9e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 235 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 192429 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 192488 Query: 236 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 295 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 192489 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 192543 Query: 296 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 355 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 192544 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 192603 Query: 356 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 415 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 192604 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 192663 Query: 416 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 473 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 192664 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 192723 Query: 474 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 192724 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 192783 Query: 533 gcaaactctgaatacta 549 ||||||| |||||||| Sbjct: 192784 gcaaactaagaatacta 192800 Score = 295 bits (149), Expect = 9e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Minus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 235 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 144353 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 144294 Query: 236 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 295 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 144293 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 144239 Query: 296 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 355 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 144238 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 144179 Query: 356 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 415 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 144178 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 144119 Query: 416 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 473 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 144118 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 144059 Query: 474 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 144058 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 143999 Query: 533 gcaaactctgaatacta 549 ||||||| |||||||| Sbjct: 143998 gcaaactaagaatacta 143982 Score = 147 bits (74), Expect = 5e-32 Identities = 125/138 (90%), Gaps = 3/138 (2%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| ||||||||||||||| || |||||||||| | ||||||||||||||||| || Sbjct: 192266 cacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggctaaatactcctgaatg 192325 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacccccagt-gggtagtga 120 |||||||| |||||||||||||||||||||||||||| |||| ||||||| ||| ||||| Sbjct: 192326 accgatagtgaagtagtaccgtgagggaaaggtgaaacagaa-ccccagtcggggagtga 192384 Query: 121 aatagaacgtgaaaccgt 138 |||||||| ||||||||| Sbjct: 192385 aatagaacatgaaaccgt 192402 Score = 147 bits (74), Expect = 5e-32 Identities = 125/138 (90%), Gaps = 3/138 (2%) Strand = Plus / Minus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| ||||||||||||||| || |||||||||| | ||||||||||||||||| || Sbjct: 144516 cacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggctaaatactcctgaatg 144457 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacccccagt-gggtagtga 120 |||||||| |||||||||||||||||||||||||||| |||| ||||||| ||| ||||| Sbjct: 144456 accgatagtgaagtagtaccgtgagggaaaggtgaaacagaa-ccccagtcggggagtga 144398 Query: 121 aatagaacgtgaaaccgt 138 |||||||| ||||||||| Sbjct: 144397 aatagaacatgaaaccgt 144380 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 596 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||| ||| | ||||||||||||| || |||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccag 192876 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 596 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||| ||| | ||||||||||||| || |||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccag 143906
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 289 bits (146), Expect = 6e-75 Identities = 263/302 (87%) Strand = Plus / Plus Query: 247 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 306 ||||||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| Sbjct: 2189 cggagccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacc 2248 Query: 307 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 366 || ||||||| |||| |||||||||||||| | | | ||| || ||||||||||||| Sbjct: 2249 cggatgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccg 2308 Query: 367 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 426 |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 2309 actgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccg 2368 Query: 427 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 486 ||||||||||||||||||||||||||||||||||||||| ||| | | | | |||| Sbjct: 2369 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttggggg 2428 Query: 487 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 546 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 2429 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaata 2488 Query: 547 ct 548 || Sbjct: 2489 ct 2490 Score = 123 bits (62), Expect = 8e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| || ||||| ||||||||| |||||||||| | ||||||||||| |||| | | Sbjct: 1953 cacgtgaaaccccgtatgaatcagcgaggaccacctcgtaaggctaaatattcctagata 2012 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 |||||||| ||| ||||||||||||||||||||||||||||||| | ||| ||||||| Sbjct: 2013 accgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccccgtgaggggagtgaaa 2072 Query: 123 tagaacgtgaaacc 136 |||||| ||||||| Sbjct: 2073 tagaacatgaaacc 2086 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 174 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 ||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2121 tctgacctcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2170 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 2563
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 284 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 343 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 344 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 403 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 404 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 463 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 464 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 520 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 521 taccaaatcgaggcaaactctgaatactaga 551 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||||| |||||||||| | ||||||||||||| ||| Sbjct: 401 ggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatacttttgga 460 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 100 |||||||||||||| ||||||||||||||||||||||||| Sbjct: 461 tgaccgatagcgaaatagtaccgtgagggaaaggtgaaaa 500 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccag 1024 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 175 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 231 |||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 571 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaa 627
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 285 bits (144), Expect = 9e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 246 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 303 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 304 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 363 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 740 Query: 364 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 423 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 741 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 800 Query: 424 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 482 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 801 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 860 Query: 483 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 542 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 861 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 920 Query: 543 aatactagata 553 ||||||||||| Sbjct: 921 aatactagata 931 Score = 170 bits (86), Expect = 4e-39 Identities = 122/134 (91%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| |||||||||||||||||| |||||||||| | |||||||||||||||| |||| Sbjct: 387 cacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctaggtg 446 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 |||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 447 accgatagcgaactagtaccgtgagggaaaggtgaaaagaacccctgtaggggagtgaaa 506 Query: 123 tagaacgtgaaacc 136 |||||| ||||||| Sbjct: 507 tagaacatgaaacc 520 Score = 97.6 bits (49), Expect = 4e-17 Identities = 55/57 (96%) Strand = Plus / Plus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcac 1000 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 175 ctgaccgcgtgcctgttgaagaatgagccggcgact 210 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 285 bits (144), Expect = 9e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 246 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 303 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 304 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 363 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 25549 Query: 364 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 423 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 25550 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 25609 Query: 424 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 482 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 25610 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 25669 Query: 483 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 542 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 25670 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 25729 Query: 543 aatactagata 553 ||||||||||| Sbjct: 25730 aatactagata 25740 Score = 170 bits (86), Expect = 4e-39 Identities = 122/134 (91%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| |||||||||||||||||| |||||||||| | |||||||||||||||| |||| Sbjct: 25196 cacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctaggtg 25255 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 |||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 25256 accgatagcgaactagtaccgtgagggaaaggtgaaaagaacccctgtaggggagtgaaa 25315 Query: 123 tagaacgtgaaacc 136 |||||| ||||||| Sbjct: 25316 tagaacatgaaacc 25329 Score = 97.6 bits (49), Expect = 4e-17 Identities = 55/57 (96%) Strand = Plus / Plus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcac 25809 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 175 ctgaccgcgtgcctgttgaagaatgagccggcgact 210 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 283 bits (143), Expect = 3e-73 Identities = 264/303 (87%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 246 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 305 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 306 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 365 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 366 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 425 ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaaccc 428 Query: 426 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag-g 484 ||||||||||||||||||||||||| ||| ||||||||| || | |||||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaacgattaaatctaggg 488 Query: 485 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 544 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| Sbjct: 489 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaa 548 Query: 545 tac 547 ||| Sbjct: 549 tac 551 Score = 170 bits (86), Expect = 4e-39 Identities = 125/138 (90%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||| | |||||||||| | ||||||||||||||||| | Sbjct: 12 ggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaaatactcctgtg 71 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||| |||||||| ||||||||||||||||||||||| | ||| ||||| Sbjct: 72 tgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtga 131 Query: 121 aatagaacgtgaaaccgt 138 |||||||| ||||||||| Sbjct: 132 aatagaacatgaaaccgt 149 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 183 gtgcctgttgaagaatgagccggcgactcatagg 216 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 250 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 309 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 310 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 369 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 370 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 429 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 430 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 486 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 487 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 546 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 934 Query: 547 ctaga 551 ||||| Sbjct: 935 ctaga 939 Score = 121 bits (61), Expect = 3e-24 Identities = 119/137 (86%), Gaps = 1/137 (0%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| ||||||| |||||||||| |||||||||| | |||||||||||||||| ||| Sbjct: 385 cacgtgaaatcccgggtgaatcagcgaggaccacctcgtaaggctaaatactcctaagtg 444 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacccccagtgggtagtgaa 121 |||||||| ||| ||||||| ||||||||||||||| |||||||| ||| |||||| Sbjct: 445 accgatagtgaacaagtaccgcgagggaaaggtgaaatagaacccctgaaggggagtgaa 504 Query: 122 atagaacgtgaaaccgt 138 ||||||| ||||||||| Sbjct: 505 atagaacatgaaaccgt 521 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 231 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 618 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagccc 1005
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 3e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 256 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 314 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 315 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 374 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 375 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 434 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 435 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 491 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 492 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 548 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 141 bits (71), Expect = 3e-30 Identities = 123/139 (88%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| ||||||||||||||| || |||||||||| | ||||||||||||||||| | Sbjct: 372 ggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggctaaatactcctgag 431 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacccccagtgggtagtg 119 | |||||||| |||||||||||| |||||||||||| ||||||||||| ||| |||| Sbjct: 432 tcaccgatagtgaagtagtaccgcgagggaaaggtgaaaaagaacccctgcaggggagtg 491 Query: 120 aaatagaacgtgaaaccgt 138 ||||||||| ||||||||| Sbjct: 492 aaatagaacatgaaaccgt 510 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 638 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatca 989 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 216 ||||||||| ||||||||||||||| ||||||||| ||||| Sbjct: 543 tgaccgcgttcctgttgaagaatgaaccggcgacttatagg 583
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 250 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 309 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 310 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 369 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 370 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 429 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 430 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 486 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 487 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 546 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 2816 Query: 547 ctaga 551 ||||| Sbjct: 2817 ctaga 2821 Score = 121 bits (61), Expect = 3e-24 Identities = 119/137 (86%), Gaps = 1/137 (0%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| ||||||| |||||||||| |||||||||| | |||||||||||||||| ||| Sbjct: 2266 cacgtgaaatcccgggtgaatcagcgaggaccacctcgtaaggctaaatactcctaagtg 2325 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacccccagtgggtagtgaa 121 |||||||| ||| ||||||| ||||||||||||||| |||||||| ||| |||||| Sbjct: 2326 accgatagtgaacaagtaccgcgagggaaaggtgaaatagaacccctgaaggggagtgaa 2385 Query: 122 atagaacgtgaaaccgt 138 ||||||| ||||||||| Sbjct: 2386 atagaacatgaaaccgt 2402 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 173 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 231 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2442 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 2500 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagccc 2887
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 259 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 318 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 319 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 378 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 379 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 438 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 439 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 497 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 498 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 259 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 318 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 319 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 378 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 379 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 438 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 439 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 497 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 498 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 147 bits (74), Expect = 5e-32 Identities = 122/138 (88%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||||| |||||||||| | ||||||||||| | ||| Sbjct: 189316 ggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatattactgaa 189375 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| ||| |||||||||||||||||||||||||||||||| | ||| ||||| Sbjct: 189376 tgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaaccccgggaggggagtga 189435 Query: 121 aatagaacgtgaaaccgt 138 |||||||| |||| |||| Sbjct: 189436 aatagaacatgaacccgt 189453 Score = 147 bits (74), Expect = 5e-32 Identities = 122/138 (88%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||||| |||||||||| | ||||||||||| | ||| Sbjct: 150743 ggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatattactgaa 150802 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| ||| |||||||||||||||||||||||||||||||| | ||| ||||| Sbjct: 150803 tgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaaccccgggaggggagtga 150862 Query: 121 aatagaacgtgaaaccgt 138 |||||||| |||| |||| Sbjct: 150863 aatagaacatgaacccgt 150880 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 189930 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 151357 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 182 cgtgcctgttgaagaatgagccggcgactcatag 215 ||||| ||||||||||||||||||||||| |||| Sbjct: 189494 cgtgcatgttgaagaatgagccggcgacttatag 189527 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 182 cgtgcctgttgaagaatgagccggcgactcatag 215 ||||| ||||||||||||||||||||||| |||| Sbjct: 150921 cgtgcatgttgaagaatgagccggcgacttatag 150954
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 280 bits (141), Expect = 5e-72 Identities = 321/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 235 ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 598 tgaccgcatgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggca 657 Query: 236 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 295 | || || |||||| ||||||||| ||||| ||||||||| |||||||| |||| Sbjct: 658 aa--aagcc---ggagccaaagcgaaagcaagtctgaatagggcgcttgtcactttttat 712 Query: 296 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 355 ||||||||||||| |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 713 ggacccgaacctgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 772 Query: 356 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 415 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 773 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 832 Query: 416 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 473 | |||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 833 agtcgaactcagagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 892 Query: 474 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 532 || | | ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 893 gggctagttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 952 Query: 533 gcaaactctgaatacta 549 ||||||| |||||||| Sbjct: 953 gcaaactaagaatacta 969 Score = 143 bits (72), Expect = 8e-31 Identities = 126/140 (90%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| ||||||||||||||| || |||||||||| | ||||||||||||||||| Sbjct: 433 ggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggctaaatactcctgaa 492 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacccccagt-gggtagt 118 |||||||||||||| |||||||||||||||||||||||| |||| ||||||| ||| ||| Sbjct: 493 tgaccgatagcgaaatagtaccgtgagggaaaggtgaaacagaa-ccccagtcggggagt 551 Query: 119 gaaatagaacgtgaaaccgt 138 |||| ||||| ||||||||| Sbjct: 552 gaaaaagaacatgaaaccgt 571 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 596 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||||||| ||| | ||||||||||||| || |||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccag 1045
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 278 bits (140), Expect = 2e-71 Identities = 315/369 (85%), Gaps = 7/369 (1%) Strand = Plus / Plus Query: 183 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 242 |||| ||||||||||||||||||||||| ||| | |||||| |||||||| || | | Sbjct: 188572 gtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggtaaagaat- 188629 Query: 243 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 302 |||| |||| || ||||||||| | ||||| ||| | |||||| |||| |||||| Sbjct: 188630 --accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttatagacccg 188687 Query: 303 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 362 |||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||||||||| Sbjct: 188688 aacccggatgatctagccatggccagggtgaagcttaggtaacactaagtggaggtccga 188747 Query: 363 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 422 ||||||| |||||||| ||| |||||||||||||||| |||||||||||||||| ||||| Sbjct: 188748 accgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgccaatcgaa 188807 Query: 423 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggacatc 480 || ||||||||||||||||||||||||| ||||||||||||| ||||| || | | Sbjct: 188808 tccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct-taaact 188866 Query: 481 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 188867 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 188926 Query: 541 tgaatacta 549 ||||||||| Sbjct: 188927 tgaatacta 188935 Score = 276 bits (139), Expect = 9e-71 Identities = 320/376 (85%), Gaps = 7/376 (1%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 235 ||||| ||||| ||||||||||||||||||||||| ||| | |||||| |||||||| | Sbjct: 150122 tgacctcgtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggta 150180 Query: 236 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 295 | | | |||| |||| || ||||||||| | ||||| ||| | |||||| |||| Sbjct: 150181 aagaat---accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttat 150237 Query: 296 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 355 |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| || Sbjct: 150238 agacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaagtgga 150297 Query: 356 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 415 ||||||| |||||| |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 150298 ggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgcc 150357 Query: 416 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 473 | ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| || Sbjct: 150358 aatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct 150417 Query: 474 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 533 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 150418 -taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagg 150476 Query: 534 caaactctgaatacta 549 |||||||||||||||| Sbjct: 150477 caaactctgaatacta 150492 Score = 155 bits (78), Expect = 2e-34 Identities = 123/138 (89%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||||| |||||||||| ||||||||||||| | ||| Sbjct: 188393 ggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgcaaggctaaatattactgaa 188452 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| ||| |||||||||||||||||||||||||||||||| | ||| ||||| Sbjct: 188453 tgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaaccccgggaggggagtga 188512 Query: 121 aatagaacgtgaaaccgt 138 |||||||| |||| |||| Sbjct: 188513 aatagaacatgaacccgt 188530 Score = 147 bits (74), Expect = 5e-32 Identities = 122/138 (88%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||||| |||||||||| | ||||||||||| | ||| Sbjct: 149950 ggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatattactgaa 150009 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| ||| |||||||||||||||||||||||||||||||| | ||| ||||| Sbjct: 150010 tgaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaaccccgggaggggagtga 150069 Query: 121 aatagaacgtgaaaccgt 138 |||||||| |||| |||| Sbjct: 150070 aatagaacatgaacccgt 150087 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 586 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 189007 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 586 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 150564
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Minus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 5974 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 5915 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 5914 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 5855 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 5854 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 5795 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 5794 agctagctggttctccccgaaatacgttgaggcg 5761 Score = 125 bits (63), Expect = 2e-25 Identities = 117/135 (86%) Strand = Plus / Minus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||| ||| ||||||||||| || |||||||||| | |||||||| |||| ||| || Sbjct: 6213 gcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggctaagtactactgtgt 6154 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||| | ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 6153 gaccgatagcgcaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 6094 Query: 122 atagaacgtgaaacc 136 ||||||| ||||||| Sbjct: 6093 atagaacatgaaacc 6079 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 6041 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 5994 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 596 tgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||||| ||| ||||| ||||||||||||| Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagccc 5609
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 211798 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 211857 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 211858 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 211917 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 211918 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 211977 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 211978 agctagctggttctccccgaaatacgttgaggcg 212011 Score = 125 bits (63), Expect = 2e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||| ||| ||||||||||| || |||||||||| | |||||||| |||| ||| || Sbjct: 211559 gcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggctaagtactactgtgt 211618 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||| | ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 211619 gaccgatagcgcaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 211678 Query: 122 atagaacgtgaaacc 136 ||||||| ||||||| Sbjct: 211679 atagaacatgaaacc 211693 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 211731 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 211778 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 596 tgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||||| ||| ||||| ||||||||||||| Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagccc 212163
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 155 bits (78), Expect = 2e-34 Identities = 123/138 (89%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||| ||| |||||||||||||| |||||||||| | |||||||| |||||||| || Sbjct: 247 gcacgtgaaattccgtgtgaatcagcgaggaccacctcgtaaggctaagtactcctgtgt 306 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 307 gaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 366 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 367 atagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 292 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 351 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 352 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 411 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 412 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 471 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 472 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 528 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 529 cgaggcaaactctgaatact 548 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 133 bits (67), Expect = 8e-28 Identities = 122/139 (87%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| ||||||||||||||| || |||||||||| | ||||||||||||||||| | Sbjct: 395 ggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggctaaatactcctgag 454 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacccccagtgggtagtg 119 | |||||||| |||||||||||| |||||||||||| ||||||||||| ||| |||| Sbjct: 455 tcaccgatagtgaagtagtaccgcgagggaaaggtgaaaaagaacccctgtaggggagtg 514 Query: 120 aaatagaacgtgaaaccgt 138 ||| ||||| ||||||||| Sbjct: 515 aaaaagaacatgaaaccgt 533 Score = 93.7 bits (47), Expect = 7e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 638 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatca 1019 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 175 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 570 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 618
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 292 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 351 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 352 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 411 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 412 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 471 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 472 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 528 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 529 cgaggcaaactctgaatact 548 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 133 bits (67), Expect = 8e-28 Identities = 122/139 (87%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| ||||||||||||||| || |||||||||| | ||||||||||||||||| | Sbjct: 2133 ggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggctaaatactcctgag 2192 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacccccagtgggtagtg 119 | |||||||| |||||||||||| |||||||||||| ||||||||||| ||| |||| Sbjct: 2193 tcaccgatagtgaagtagtaccgcgagggaaaggtgaaaaagaacccctgtaggggagtg 2252 Query: 120 aaatagaacgtgaaaccgt 138 ||| ||||| ||||||||| Sbjct: 2253 aaaaagaacatgaaaccgt 2271 Score = 93.7 bits (47), Expect = 7e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 638 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatca 2757 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 175 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 2308 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 2356
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 270 bits (136), Expect = 5e-69 Identities = 251/286 (87%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 235 |||||| |||||||||||||||||||||||||||| ||||| | |||| ||||||||| Sbjct: 2776 tgaccgtgtgcctgttgaagaatgagccggcgacttataggtactggca-ggttaaggg- 2833 Query: 236 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 295 |||| | |||||||| ||||||||||||||| ||||||||||| |||| | |||| Sbjct: 2834 --ggaaatc-ccggagccacagcgaaagcgagtctgaatagggcgatggtcagtatttat 2890 Query: 296 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 355 |||||||||| |||||||||| ||||| |||||||||||||||| ||| || | | || Sbjct: 2891 agacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgataccacgtgga 2950 Query: 356 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 415 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2951 ggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcc 3010 Query: 416 actcgaacccagagctagctggttctccccgaaatgcgttgaggcg 461 | |||||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 3011 aatcgaacccggagctagctggttctccccgaaatacgtttaggcg 3056 Score = 155 bits (78), Expect = 2e-34 Identities = 123/138 (89%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||||||| ||||||||||| || |||||||||| | |||||||| |||||||| || Sbjct: 2605 gcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggctaagtactcctgtgt 2664 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||| |||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 2665 gaccgatagtgaagcagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 2724 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 2725 atagaacatgaaaccgtg 2742 Score = 91.7 bits (46), Expect = 3e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 483 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 541 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 542 gaatac 547 |||||| Sbjct: 3139 gaatac 3144 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 596 tgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||||| ||| ||| ||||||||||||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagccc 3208
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 246 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 300 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 477 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 478 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 536 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 537 actctgaatactagata 553 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 139 bits (70), Expect = 1e-29 Identities = 122/138 (88%), Gaps = 1/138 (0%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 ||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||| Sbjct: 523 ggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctggg 582 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| | | ||||||| ||||||| ||||| ||||||||| ||| ||||| Sbjct: 583 tgaccgatagtgca-aagtaccgcgagggaatggtgataagaacccctgtaggggagtga 641 Query: 121 aatagaacgtgaaaccgt 138 |||||||| ||||||||| Sbjct: 642 aatagaacatgaaaccgt 659 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 175 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 233 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 618 agagggaaacagcccggatcaccag 642 ||||||||||||||| ||||||||| Sbjct: 1126 agagggaaacagcccagatcaccag 1150
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 246 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 300 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 477 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 478 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 536 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 537 actctgaatactagata 553 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 139 bits (70), Expect = 1e-29 Identities = 122/138 (88%), Gaps = 1/138 (0%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 ||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||| Sbjct: 523 ggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctggg 582 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| | | ||||||| ||||||| ||||| ||||||||| ||| ||||| Sbjct: 583 tgaccgatagtgca-aagtaccgcgagggaatggtgataagaacccctgtaggggagtga 641 Query: 121 aatagaacgtgaaaccgt 138 |||||||| ||||||||| Sbjct: 642 aatagaacatgaaaccgt 659 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 175 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 233 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 618 agagggaaacagcccggatcaccag 642 ||||||||||||||| ||||||||| Sbjct: 1126 agagggaaacagcccagatcaccag 1150
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 8e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 259 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 318 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 319 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 378 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 379 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 438 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 439 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 495 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 496 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 174 bits (88), Expect = 2e-40 Identities = 186/218 (85%), Gaps = 3/218 (1%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||| |||||||| ||||||||||| |||||||||| | ||||||||||||| ||| | Sbjct: 12 ggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaaatactactgtg 71 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| ||| ||||||| ||||||||||||||||||||||| ||| ||||| Sbjct: 72 tgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccggaaggggagtga 131 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| |||||||| | |||| |||||||||||||| | | | ||||||| Sbjct: 132 aatagaacatgaaaccg---ttagcttacaagcagtgggaggactatttaaagtctgacc 188 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggca 218 |||||||||||||||||||||||||||||| ||||||| Sbjct: 189 gcgtgcctgttgaagaatgagccggcgacttataggca 226 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 266 bits (134), Expect = 8e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 246 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 305 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 137118 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 137177 Query: 306 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 365 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 137178 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 137237 Query: 366 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 425 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 137238 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 137297 Query: 426 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 482 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 137298 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 137357 Query: 483 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 542 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 137358 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 137417 Query: 543 aatactag 550 |||||||| Sbjct: 137418 aatactag 137425 Score = 266 bits (134), Expect = 8e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Minus Query: 246 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 305 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 48426 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 48367 Query: 306 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 365 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 48366 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 48307 Query: 366 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 425 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 48306 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 48247 Query: 426 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 482 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 48246 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 48187 Query: 483 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 542 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 48186 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 48127 Query: 543 aatactag 550 |||||||| Sbjct: 48126 aatactag 48119 Score = 147 bits (74), Expect = 5e-32 Identities = 125/138 (90%), Gaps = 3/138 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 ||||||||||| ||||||||||||||| |||||||||| | |||||||||||||| |||| Sbjct: 136879 ggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcttggg 136938 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacccccagt-gggtagt 118 |||||||||| ||| |||||||||||||||||||||||| |||| ||||||| ||| ||| Sbjct: 136939 tgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-ccccagtaggggagt 136997 Query: 119 gaaatagaacgtgaaacc 136 | |||||||| ||||||| Sbjct: 136998 gcaatagaacatgaaacc 137015 Score = 147 bits (74), Expect = 5e-32 Identities = 125/138 (90%), Gaps = 3/138 (2%) Strand = Plus / Minus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 ||||||||||| ||||||||||||||| |||||||||| | |||||||||||||| |||| Sbjct: 48665 ggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcttggg 48606 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacccccagt-gggtagt 118 |||||||||| ||| |||||||||||||||||||||||| |||| ||||||| ||| ||| Sbjct: 48605 tgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-ccccagtaggggagt 48547 Query: 119 gaaatagaacgtgaaacc 136 | |||||||| ||||||| Sbjct: 48546 gcaatagaacatgaaacc 48529 Score = 93.7 bits (47), Expect = 7e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 638 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatca 137496 Score = 93.7 bits (47), Expect = 7e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 638 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatca 48048 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 233 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 137110 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 233 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 48434
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 266 bits (134), Expect = 8e-68 Identities = 267/310 (86%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 245 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 304 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 305 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 364 || |||||||||| ||||| |||||| ||||||||| |||||| | || |||||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaac 743 Query: 365 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 424 |||| || |||||||| || |||||||||||||||||||||||||||| ||| |||||| Sbjct: 744 cgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaact 803 Query: 425 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca- 478 | ||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 804 cggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcag 863 Query: 479 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 538 ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 864 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaac 923 Query: 539 tctgaatact 548 | ||||||| Sbjct: 924 taagaatact 933 Score = 214 bits (108), Expect = 3e-52 Identities = 203/233 (87%), Gaps = 5/233 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||||| |||||||||| | ||||||| |||||||| || Sbjct: 390 ggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctacatactcctagg 449 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 450 tgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaacccccgcaggggagtga 509 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 || ||| | |||||||| || ||| |||||||||||||||| ||| | |||||| Sbjct: 510 aaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg--cctgagccctgacc 564 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 233 |||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 565 gcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttggttaagg 617 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 580 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 639 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 640 cag 642 ||| Sbjct: 1008 cag 1010
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 266 bits (134), Expect = 8e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||||||||||||| |||||| || |||| |||||||||| Sbjct: 356101 ggagccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccc 356160 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 ||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 356161 tggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 356220 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 356221 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccagg 356280 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 356281 agctagctggttctccccgaaatacgttgaggcg 356314 Score = 147 bits (74), Expect = 5e-32 Identities = 122/138 (88%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||||||| ||||||||||| | |||||||||| | |||||||| |||||||| || Sbjct: 355863 gcacgtggaattccgtgtgaatctacgaggaccacctcgtaaggctaagtactcctgtgt 355922 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 355923 gaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 355982 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 355983 atagaacatgaaaccgtg 356000 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 356034 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 356081 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcga 531 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2138158 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 2138099 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2138098 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2138039 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2138038 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 2137979 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 2137978 agctagctggttctccccgaaatacgttgaggcg 2137945 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 476702 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 476761 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 476762 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 476821 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 476822 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 476881 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 476882 agctagctggttctccccgaaatacgttgaggcg 476915 Score = 139 bits (70), Expect = 1e-29 Identities = 121/138 (87%) Strand = Plus / Minus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||| ||| ||||||||||| || |||||||||| | |||||||| |||| ||| || Sbjct: 2138396 gcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggctaagtactactgtgt 2138337 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 2138336 gaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 2138277 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 2138276 atagaacatgaaaccgtg 2138259 Score = 139 bits (70), Expect = 1e-29 Identities = 121/138 (87%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||| ||| ||||||||||| || |||||||||| | |||||||| |||| ||| || Sbjct: 476464 gcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggctaagtactactgtgt 476523 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 476524 gaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 476583 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 476584 atagaacatgaaaccgtg 476601 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2138225 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2138178 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 476635 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 476682 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 596 tgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||||| ||| ||||||||||||||||||| Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagccc 2137793 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 596 tgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||||| ||| ||||||||||||||||||| Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagccc 477067
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 2e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 259 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 318 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 319 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 378 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 379 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 438 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 439 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 495 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 496 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 127 bits (64), Expect = 5e-26 Identities = 118/136 (86%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||| |||||||| ||||||||| | |||||||||| | ||||||||||||| ||| | Sbjct: 12 ggcacgaggaatcccatgtgaatcaccgaggaccacctcgtaaggctaaatactactgtg 71 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| ||| ||||||| ||||||||||||||||||||||| ||| ||||| Sbjct: 72 tgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccggaaggggagtga 131 Query: 121 aatagaacgtgaaacc 136 |||||||| ||||||| Sbjct: 132 aatagaacatgaaacc 147 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 218 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 258 bits (130), Expect = 2e-65 Identities = 253/292 (86%), Gaps = 4/292 (1%) Strand = Plus / Plus Query: 174 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 233 |||||| |||||||||||||||||||||||||||||| ||| | |||||| |||||||| Sbjct: 2303 tctgactgcgtgcctgttgaagaatgagccggcgacttataagtagtggca-ggttaagg 2361 Query: 234 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 293 | | | ||||||||| ||| ||||||||| || ||||||||| ||||||||| || Sbjct: 2362 tagagaat---accggagccatagtgaaagcgagcctgaatagggcgtttgtcactggtt 2418 Query: 294 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 353 || |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| Sbjct: 2419 atagacccgaacccggatgatctaaccatggccaggttgaagcttaggtaatactaagtg 2478 Query: 354 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 413 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2479 gaggaccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 2538 Query: 414 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 465 ||| ||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2539 ccaatcgaattcggagctagctggttctccccgaaatgcgtttaggcgcagc 2590 Score = 133 bits (67), Expect = 8e-28 Identities = 119/135 (88%), Gaps = 1/135 (0%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||| ||| |||||||||||||| |||||||||| | ||||||||||| ||||| | Sbjct: 2134 gcacgtgaaattccgtgtgaatcagcgaggaccacctcgtaaggctaaatattcctgaat 2193 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||| ||| |||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 2194 gaccgatagtgaaatagtaccgtgagggaaaggtgaaaagaaccccgggaggggagtgaa 2253 Query: 122 atagaacgtgaaacc 136 | ||||| ||||||| Sbjct: 2254 a-agaacatgaaacc 2267 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 585 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccag 2748
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 339409 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 339350 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 339349 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 339290 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 339289 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 339230 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 339229 agctagctggttctccccgaaatacgttgaggcg 339196 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 132469 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 132410 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 132409 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 132350 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 132349 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 132290 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 132289 agctagctggttctccccgaaatacgttgaggcg 132256 Score = 139 bits (70), Expect = 1e-29 Identities = 121/138 (87%) Strand = Plus / Minus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||| ||| ||||||||||| || |||||||||| | |||||||| |||| ||| || Sbjct: 339647 gcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggctaagtactactgtgt 339588 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 339587 gaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 339528 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 339527 atagaacatgaaaccgtg 339510 Score = 139 bits (70), Expect = 1e-29 Identities = 121/138 (87%) Strand = Plus / Minus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||| ||| ||||||||||| || |||||||||| | |||||||| |||| ||| || Sbjct: 132707 gcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggctaagtactactgtgt 132648 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 132647 gaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 132588 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 132587 atagaacatgaaaccgtg 132570 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 339476 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 339429 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 132536 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 132489 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 596 tgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||||| ||| ||| ||||||||||||||| Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagccc 339044 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 596 tgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||||| ||| ||| ||||||||||||||| Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagccc 132104
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 163 bits (82), Expect = 9e-37 Identities = 124/138 (89%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||||||| |||||||||||||| |||||||||| | |||||||| |||||||| || Sbjct: 247 gcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggctaagtactcctgtgt 306 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 307 gaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 366 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 367 atagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 163 bits (82), Expect = 9e-37 Identities = 124/138 (89%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||||||| |||||||||||||| |||||||||| | |||||||| |||||||| || Sbjct: 247 gcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggctaagtactcctgtgt 306 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 307 gaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 366 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 367 atagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 163 bits (82), Expect = 9e-37 Identities = 124/138 (89%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||||||| |||||||||||||| |||||||||| | |||||||| |||||||| || Sbjct: 247 gcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggctaagtactcctgtgt 306 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 307 gaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 366 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 367 atagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 163 bits (82), Expect = 9e-37 Identities = 124/138 (89%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||||||| |||||||||||||| |||||||||| | |||||||| |||||||| || Sbjct: 247 gcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggctaagtactcctgtgt 306 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 307 gaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 366 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 367 atagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 163 bits (82), Expect = 9e-37 Identities = 124/138 (89%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||||||| |||||||||||||| |||||||||| | |||||||| |||||||| || Sbjct: 247 gcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggctaagtactcctgtgt 306 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 307 gaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 366 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 367 atagaacatgaaaccgtg 384 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 258 bits (130), Expect = 2e-65 Identities = 271/312 (86%), Gaps = 7/312 (2%) Strand = Plus / Plus Query: 250 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 307 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 | ||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | | Sbjct: 776 ccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcgg 835 Query: 428 agctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctagg 484 |||||||||| ||||||||||||||||||||||||||| || || || || |||| || Sbjct: 836 agctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttgg 894 Query: 485 ggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 543 |||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| || Sbjct: 895 ggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcaga 954 Query: 544 atactagatatg 555 |||| ||||||| Sbjct: 955 atacaagatatg 966 Score = 167 bits (84), Expect = 6e-38 Identities = 123/136 (90%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| |||||||||||||||||| |||||||||| | ||||||||||||||||| ||| Sbjct: 418 cacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgagtg 477 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 |||||||||||| ||||||| ||||||||||||||||||||||| |||| ||||||| Sbjct: 478 accgatagcgaaatagtaccacgagggaaaggtgaaaagaacccctgttggggagtgaaa 537 Query: 123 tagaacgtgaaaccgt 138 |||||| ||||||||| Sbjct: 538 tagaacatgaaaccgt 553 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 234 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccag 1036
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Minus Query: 186 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 245 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 39855 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 39800 Query: 246 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 304 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 39799 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 39740 Query: 305 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 364 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 39739 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 39680 Query: 365 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 424 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 39679 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 39620 Query: 425 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 483 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 39619 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 39560 Query: 484 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 543 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 39559 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 39500 Query: 544 atacta 549 |||||| Sbjct: 39499 atacta 39494 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 186 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 245 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 19545 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 19600 Query: 246 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 304 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 19601 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 19660 Query: 305 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 364 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 19661 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 19720 Query: 365 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 424 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 19721 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 19780 Query: 425 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 483 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 19781 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 19840 Query: 484 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 543 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 19841 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 19900 Query: 544 atacta 549 |||||| Sbjct: 19901 atacta 19906 Score = 113 bits (57), Expect = 7e-22 Identities = 93/105 (88%) Strand = Plus / Minus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| || |||||||||||| || |||||||||| | ||||||||||| ||||| || Sbjct: 40035 cacgtgaaaccccgtgtgaatctgcgaggaccacctcgtaaggctaaatattcctgaatg 39976 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 107 |||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 39975 accgatagcgaacaagtaccgcgagggaaaggtgaaaagaacccc 39931 Score = 113 bits (57), Expect = 7e-22 Identities = 93/105 (88%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 |||||| || |||||||||||| || |||||||||| | ||||||||||| ||||| || Sbjct: 19365 cacgtgaaaccccgtgtgaatctgcgaggaccacctcgtaaggctaaatattcctgaatg 19424 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 107 |||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 19425 accgatagcgaacaagtaccgcgagggaaaggtgaaaagaacccc 19469 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 596 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||| ||| ||| | ||||||||||||| || |||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccag 39422 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 596 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||||| ||| ||| | ||||||||||||| || |||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccag 19978
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 252 bits (127), Expect = 1e-63 Identities = 272/317 (85%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 246 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 300 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 935 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 936 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 995 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 477 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 996 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1054 Query: 478 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 536 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1055 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1114 Query: 537 actctgaatactagata 553 |||| |||||||||||| Sbjct: 1115 actcagaatactagata 1131 Score = 167 bits (84), Expect = 6e-38 Identities = 198/232 (85%), Gaps = 8/232 (3%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 ||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||| Sbjct: 583 cacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgggtg 642 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 |||||||| | | ||||||| ||||||| ||||| ||||||||| ||| ||||||| Sbjct: 643 accgatagtgcaa-agtaccgcgagggaatggtgataagaacccctgtaggggagtgaaa 701 Query: 123 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc-tgaccg 181 |||||| |||||||| | |||| ||||||||||||| |||| | || |||||| Sbjct: 702 tagaacatgaaaccg---taagctgacaagcagtgggagc---aagttaacttgtgaccg 755 Query: 182 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 233 ||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 756 cgtgcctgttgaagaatgagccggcgacttataggaagtggcaaggttaagg 807 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 618 agagggaaacagcccggatcaccag 642 ||||||||||||||| ||||||||| Sbjct: 1180 agagggaaacagcccagatcaccag 1204
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 5e-63 Identities = 310/368 (84%), Gaps = 5/368 (1%) Strand = Plus / Plus Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 240 |||||||||||||||||||||||||||||| ||||||| |||| ||||||||| | | Sbjct: 188 gcgtgcctgttgaagaatgagccggcgacttataggcactggca-ggttaaggggaataa 246 Query: 241 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 300 |||| | |||| || |||| ||||||| ||||||||| | |||| || |||| |||| Sbjct: 247 accc---gaagccaaagggaaaccgagtctgaatagggcgttagtcagtgtttatagacc 303 Query: 301 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 360 |||||| |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||| Sbjct: 304 cgaacccgggtgatctaaccatgtccaggatgaagcttgggtgacaccaagtggaggtcc 363 Query: 361 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 420 |||||||| |||||| | ||||||||| |||||||||||||||||||||| ||| Sbjct: 364 gaaccgaccaccgttgaaaaggtggcggatgaggtgtggttaggggtgaaatgccaatcg 423 Query: 421 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 480 ||||| ||||||||||||||||| ||||||| |||||||| |||| |||| ||| | Sbjct: 424 aacccggagctagctggttctcctcgaaatgtgttgaggcacagcggttgtgattacagc 483 Query: 481 t-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 539 | |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| Sbjct: 484 tggggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaact 543 Query: 540 ctgaatac 547 | |||||| Sbjct: 544 cagaatac 551 Score = 125 bits (63), Expect = 2e-25 Identities = 121/139 (87%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| ||||||||||||||| | |||||||||| |||| |||||||||||| | Sbjct: 12 ggcacgtgaaatcccgtgtgaatccaccaggaccacctcttaaggttaaatactcctgcg 71 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| ||| ||||||| ||||||||||||||||||| |||| | ||| ||||| Sbjct: 72 tgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaa-ccccggaggggagtga 130 Query: 121 aatagaacgtgaaaccgtg 139 |||||||| |||||||||| Sbjct: 131 aatagaacatgaaaccgtg 149 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 5e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 256 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 315 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 316 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 375 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 376 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 435 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 436 ggttctccccgaaatgcgttgaggcgcagc 465 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 121 bits (61), Expect = 3e-24 Identities = 141/167 (84%), Gaps = 3/167 (1%) Strand = Plus / Plus Query: 42 aaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaag 101 ||||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| Sbjct: 53 aaggctaaatactcctgtgtgaccgatagagaaccagtaccgcgagggaaaggtgaaaag 112 Query: 102 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 161 |||||| | ||| ||||||||||||| ||||||||| |||| ||||||||||||| Sbjct: 113 aaccccgggaggggagtgaaatagaacctgaaaccgtt---agcttacaagcagtgggag 169 Query: 162 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 208 | | | |||||||||||||||||||||| |||||||||||| Sbjct: 170 gacgattaaacgtctgaccgcgtgcctgttgaagcatgagccggcga 216 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 483 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 542 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 543 aatac 547 ||||| Sbjct: 548 aatac 552 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 626
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 5e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 256 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 315 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 316 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 375 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 376 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 435 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 436 ggttctccccgaaatgcgttgaggcgcagc 465 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 131 bits (66), Expect = 3e-27 Identities = 117/134 (87%) Strand = Plus / Plus Query: 5 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 64 |||| ||||||||||||||| || ||||||| || | ||||||||||||| ||| ||||| Sbjct: 16 cgtgaaatcccgtgtgaatctgcgaggaccatctcgtaaggctaaatactactgtgtgac 75 Query: 65 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 124 |||||| ||| ||||||| ||||||||||||||||||||||| | ||| ||||||||| Sbjct: 76 cgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgaaaggggagtgaaata 135 Query: 125 gaacgtgaaaccgt 138 |||| ||||||||| Sbjct: 136 gaacctgaaaccgt 149 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 483 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 542 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 543 aatac 547 ||||| Sbjct: 548 aatac 552 Score = 79.8 bits (40), Expect = 1e-11 Identities = 55/60 (91%) Strand = Plus / Plus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| ||||||||||||| |||||||||||| | |||||||||||| Sbjct: 184 tgaccgtgtgcctgttgaagcatgagccggcgagttataggcagtggc 231
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 250 bits (126), Expect = 5e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 246 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 304 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 305 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 364 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 365 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 424 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 425 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 482 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 483 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 541 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 542 gaatactagatatg 555 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 170 bits (86), Expect = 4e-39 Identities = 125/138 (90%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||||| |||||||||| | ||||||||||||||||| | Sbjct: 408 ggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgag 467 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||| ||||||| ||||||||||||||||||||||| |||| ||||| Sbjct: 468 tgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaacccctgttggggagtga 527 Query: 121 aatagaacgtgaaaccgt 138 |||||||| ||||||||| Sbjct: 528 aatagaacatgaaaccgt 545 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccag 1031 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 224 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 5e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 163 bits (82), Expect = 9e-37 Identities = 124/138 (89%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||||||| |||||||||||||| |||||||||| | |||||||| |||||||| || Sbjct: 234 gcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggctaagtactcctgtgt 293 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 294 gaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 353 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 354 atagaacatgaaaccgtg 371 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 216 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 5e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 163 bits (82), Expect = 9e-37 Identities = 124/138 (89%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||||||| |||||||||||||| |||||||||| | |||||||| |||||||| || Sbjct: 234 gcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggctaagtactcctgtgt 293 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 294 gaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 353 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 354 atagaacatgaaaccgtg 371 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 216 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 5e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 163 bits (82), Expect = 9e-37 Identities = 124/138 (89%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||||||| |||||||||||||| |||||||||| | |||||||| |||||||| || Sbjct: 234 gcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggctaagtactcctgtgt 293 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 294 gaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 353 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 354 atagaacatgaaaccgtg 371 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 216 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 5e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 354 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 413 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 414 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 473 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 474 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 530 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 531 aggcaaactctgaatactag 550 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 172 bits (87), Expect = 9e-40 Identities = 102/107 (95%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 388 ggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaaggctaaatactcctaga 447 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 107 |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 448 tgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 494 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 177 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 233 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||| || |||||||||||||| ||||| ||||||||||||| Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagccc 1001 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 283 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 338 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 250 bits (126), Expect = 5e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 246 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 304 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 305 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 364 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 365 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 424 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 425 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 482 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 483 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 541 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 542 gaatactagatatg 555 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 170 bits (86), Expect = 4e-39 Identities = 125/138 (90%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||||| |||||||||| | ||||||||||||||||| | Sbjct: 408 ggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgag 467 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||| ||||||| ||||||||||||||||||||||| |||| ||||| Sbjct: 468 tgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaacccctgttggggagtga 527 Query: 121 aatagaacgtgaaaccgt 138 |||||||| ||||||||| Sbjct: 528 aatagaacatgaaaccgt 545 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccag 1031 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 224 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 248 bits (125), Expect = 2e-62 Identities = 197/221 (89%) Strand = Plus / Plus Query: 245 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 304 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 305 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 364 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 365 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 424 |||| ||||||||| |||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 742 cgaccgatgttgaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaact 801 Query: 425 cagagctagctggttctccccgaaatgcgttgaggcgcagc 465 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 802 cggagctagctggttctccccgaaatgcgttgaggcgcagc 842 Score = 155 bits (78), Expect = 2e-34 Identities = 123/138 (89%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||| | |||||||||| | ||| ||||||||||||| | Sbjct: 385 ggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagactaaatactcctgag 444 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| ||| ||||||||||||||||||||||||||||||||| ||| ||||| Sbjct: 445 tgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaacccccataggggagtga 504 Query: 121 aatagaacgtgaaaccgt 138 |||||| | ||||||||| Sbjct: 505 aatagatcatgaaaccgt 522 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 174 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 233 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 478 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 537 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 538 ctctgaatactagata 553 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 641 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcacca 1002
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 246 bits (124), Expect = 8e-62 Identities = 208/233 (89%), Gaps = 6/233 (2%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||||| |||||||||| | ||||||||||||||||| | Sbjct: 424 ggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgag 483 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||| |||||||| |||||||||| ||||||||||||| | ||| ||||| Sbjct: 484 tgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaacccccggaggggagtga 543 Query: 121 aatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgacc 180 |||||||| ||||||||| | ||| |||||||||||| ||||| ||| ||||||| Sbjct: 544 aatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaaatagat-tctgacc 597 Query: 181 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 233 |||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 598 gcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaagg 650 Score = 63.9 bits (32), Expect = 6e-07 Identities = 153/191 (80%), Gaps = 3/191 (1%) Strand = Plus / Plus Query: 360 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 419 ||||| ||| ||||||||| |||| || |||||| |||| ||| || ||||| ||| || Sbjct: 1427 cgaacggaccgatgttgaaaaatcggccgatgagctgtgtctagcggagaaattccaatc 1486 Query: 420 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt--gactggac 477 ||| | ||||||||||| |||| ||||||| ||||||||| ||| || ||| || Sbjct: 1487 gaattccgagctagctggatctctccgaaatttgttgaggcgaagcggtgacgacgggct 1546 Query: 478 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 536 || |||||||||| || |||||||||||||||||| |||||||||||| ||| | | | Sbjct: 1547 gccttggggtaaagctaccgtttcggtgcgggctgcgagagcggtaccaagtcgtgacga 1606 Query: 537 actctgaatac 547 |||| |||||| Sbjct: 1607 actcagaatac 1617 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||| ||| |||||||| ||| ||| ||||||||||||||| ||||||||| Sbjct: 1638 ccagtgagactatgacggataagcgccatagtcaagagggaaacagcccagatcaccag 1696 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 284 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagc 336 |||||| |||||||||||||||| || ||||||| |||| |||| ||||||| Sbjct: 722 gtcacttcttatggacccgaaccgggatgatctaggcatggccagaatgaagc 774
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 246 bits (124), Expect = 8e-62 Identities = 273/317 (86%), Gaps = 8/317 (2%) Strand = Plus / Plus Query: 246 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 302 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 303 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 362 |||| ||||||||||| ||||||||||||||||||||| | | || ||| ||||||||| Sbjct: 704 aacccgggtgatctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccga 763 Query: 363 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 422 |||||| ||||||||| |||| |||||||||||||| |||||| ||||| ||| ||||| Sbjct: 764 accgaccgatgttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaa 823 Query: 423 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-at 479 | | ||||||||||| ||||||||||||||||||||||||||| || || || || || Sbjct: 824 ctcggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactat 882 Query: 480 ctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 538 || |||||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||| Sbjct: 883 cttggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaac 942 Query: 539 tctgaatactagatatg 555 || |||||| ||||||| Sbjct: 943 tcagaatacaagatatg 959 Score = 163 bits (82), Expect = 9e-37 Identities = 124/138 (89%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| |||||||||||||||||| |||||||||| | ||||| ||||||||||| | Sbjct: 408 ggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggcaaaatactcctgag 467 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||| ||||||| ||||||||||||||||||||||| |||| ||||| Sbjct: 468 tgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaacccctgttggggagtga 527 Query: 121 aatagaacgtgaaaccgt 138 |||||||| ||||||||| Sbjct: 528 aatagaacatgaaaccgt 545 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 233 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 604 aagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccag 2745
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 246 bits (124), Expect = 8e-62 Identities = 124/124 (100%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 452 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 512 Query: 121 aata 124 |||| Sbjct: 513 aata 516
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 246 bits (124), Expect = 8e-62 Identities = 269/314 (85%), Gaps = 5/314 (1%) Strand = Plus / Plus Query: 246 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 303 |||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 718 ccggagccttagcgaaagcaagtcttaatagggcgataaagtcacttcttatggacccga 777 Query: 304 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 363 ||| ||||||||||| |||| |||||||||||||||| | | || || |||||||||| Sbjct: 778 acccgggtgatctattcatggccaggatgaagcttgggtaacacctagtggaggtccgaa 837 Query: 364 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 423 ||||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 838 ccgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaac 897 Query: 424 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg--actggacatct 481 | ||||||||||| ||||||||||||||||||||||||||| || | | | |||| Sbjct: 898 tcggagctagctggatctccccgaaatgcgttgaggcgcagcggtggctatgagctatct 957 Query: 482 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 540 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 958 agaggtaaagcgactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1017 Query: 541 tgaatactagatat 554 ||||||||||||| Sbjct: 1018 agaatactagatat 1031 Score = 135 bits (68), Expect = 2e-28 Identities = 120/136 (88%), Gaps = 1/136 (0%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 ||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||| Sbjct: 485 cacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgggtg 544 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 |||||||| | | ||||||| ||||||| ||| ||||||||||| ||| ||||||| Sbjct: 545 accgatagtgca-aagtaccgcgagggaatggtaaaaagaacccctgtaggggagtgaaa 603 Query: 123 tagaacgtgaaaccgt 138 |||||| ||||||||| Sbjct: 604 tagaacatgaaaccgt 619 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 175 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 233 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 651 ctgaccgcgtgcctgttgaagaatgagcctgcgacttatagggagtggcaaggttaagg 709 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 618 agagggaaacagcccggatcaccag 642 ||||||||||||||| ||||||||| Sbjct: 1079 agagggaaacagcccagatcaccag 1103
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 256 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 315 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 316 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 375 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 376 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 435 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 436 ggttctccccgaaatgcgttgaggcgcagcagttg 470 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 155 bits (78), Expect = 2e-34 Identities = 123/138 (89%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||| ||| |||||| ||||||||||| || |||| || | ||||||||||||||||| | Sbjct: 12 ggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaaatactcctgtg 71 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 ||||||||||||||||||||||| ||||||||||||||||||||||| | ||| ||||| Sbjct: 72 tgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccgaaaggggagtga 131 Query: 121 aatagaacgtgaaaccgt 138 |||||||| ||||||||| Sbjct: 132 aatagaacatgaaaccgt 149 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 483 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 542 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 543 aatac 547 ||||| Sbjct: 550 aatac 554 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 174 tctgaccgcgtgcctgttgaagaatgagccggcga 208 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 244 bits (123), Expect = 3e-61 Identities = 262/305 (85%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 246 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 305 |||||||| || |||| ||||||| || ||||||| ||| || |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaac 308 Query: 306 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 365 | ||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 cctggtgatctaaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 366 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 425 ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacca 428 Query: 426 agagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag 483 ||||||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctgg 486 Query: 484 -gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 542 |||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 543 aatac 547 ||||| Sbjct: 547 aatac 551 Score = 131 bits (66), Expect = 3e-27 Identities = 120/138 (86%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||| |||||||| ||||||||||| ||||||| || | ||||||||||||| ||| | Sbjct: 12 ggcacgaggaatcccatgtgaatcagcgaggaccatctcgtaaggctaaatactactgtg 71 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| ||| ||||||| ||||||||||||||||||||||| ||| ||||| Sbjct: 72 tgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccggaaggggagtga 131 Query: 121 aatagaacgtgaaaccgt 138 |||||||| ||||||||| Sbjct: 132 aatagaacatgaaaccgt 149 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 218 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 583 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 244 bits (123), Expect = 3e-61 Identities = 267/310 (86%), Gaps = 5/310 (1%) Strand = Plus / Plus Query: 246 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 305 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 306 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 365 | |||||||||| |||| |||||||||| |||| | | || || | |||||||||||| Sbjct: 878 ccgggtgatctaatcatggccaggatgaaatttgggtaacaccaaccggaggtccgaacc 937 Query: 366 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 425 ||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | Sbjct: 938 gaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactc 997 Query: 426 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt--gactggacatctag 483 ||||||||||| ||||||||||||||||||||||||||| ||| || | ||||||| Sbjct: 998 ggagctagctggatctccccgaaatgcgttgaggcgcagcggttaagatttaccatctag 1057 Query: 484 gggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 542 ||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||| | Sbjct: 1058 gggtaaagcgactgtttcggtgcgggctgcgaaagcggtaccaagtcgtggcaaactcag 1117 Query: 543 aatactagat 552 |||||||||| Sbjct: 1118 aatactagat 1127 Score = 174 bits (88), Expect = 2e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 3 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 62 ||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||| Sbjct: 574 cacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggctaaatactcctgggtg 633 Query: 63 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 122 ||||||||||||||||||||| ||||||||||||||||||||| | | | ||||||| Sbjct: 634 accgatagcgaagtagtaccgcgagggaaaggtgaaaagaacctctgaagaggagtgaaa 693 Query: 123 tagaacgtgaaaccgt 138 |||||| ||||||||| Sbjct: 694 tagaacatgaaaccgt 709 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 175 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 618 agagggaaacagcccggatcaccag 642 ||||||||||||||| ||||||||| Sbjct: 1177 agagggaaacagcccagatcaccag 1201
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 256 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 315 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 316 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 375 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 376 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 435 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 436 ggttctccccgaaatgcgttgaggcg 461 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 139 bits (70), Expect = 1e-29 Identities = 121/138 (87%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||||||| ||||||||||| || |||||||||| | |||||||| |||| ||| || Sbjct: 319987 gcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggctaagtactactgtgt 320046 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||| ||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 320047 gaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 320106 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 320107 atagaacatgaaaccgtg 320124 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 320158 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 320205 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcga 531 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 596 tgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||||| ||| ||| ||||||||||||||| Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagccc 320590
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Minus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 1775855 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 1775796 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 1775795 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 1775736 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 1775735 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 1775676 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 1775675 agctagctggttctccccgaaatacgttgaggcg 1775642 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 376214 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 376273 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 376274 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 376333 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 376334 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 376393 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 376394 agctagctggttctccccgaaatacgttgaggcg 376427 Score = 139 bits (70), Expect = 1e-29 Identities = 121/138 (87%) Strand = Plus / Minus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||| ||| ||||||||||| || |||||||||| | |||||||| |||| ||| || Sbjct: 1776093 gcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggctaagtactactgtgt 1776034 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 1776033 gaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 1775974 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 1775973 atagaacatgaaaccgtg 1775956 Score = 139 bits (70), Expect = 1e-29 Identities = 121/138 (87%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||| ||| ||||||||||| || |||||||||| | |||||||| |||| ||| || Sbjct: 375976 gcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggctaagtactactgtgt 376035 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 376036 gaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 376095 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 376096 atagaacatgaaaccgtg 376113 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1775922 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 1775875 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 376147 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 376194 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 596 tgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||||| ||| ||||||||||||||||||| Sbjct: 1775526 tgggggataagctccatggtcgagagggaaacagccc 1775490 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 596 tgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||||| ||| ||||||||||||||||||| Sbjct: 376543 tgggggataagctccatggtcgagagggaaacagccc 376579
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 256 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 315 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 316 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 375 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 376 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 435 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 436 ggttctccccgaaatgcgttgaggcg 461 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 125 bits (63), Expect = 2e-25 Identities = 121/139 (87%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac-tcctggg 60 ||||||||||| ||||||||||| || |||||||||| | |||||||| ||| | ||| | Sbjct: 2409 gcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggctaagtacctactgtg 2468 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| ||| ||||||| ||||||||||||||||||||||| | ||| ||||| Sbjct: 2469 tgaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtga 2528 Query: 121 aatagaacgtgaaaccgtg 139 |||||||| |||||||||| Sbjct: 2529 aatagaacatgaaaccgtg 2547 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2581 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2628 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcga 531 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 596 tgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||||| ||| ||| ||||||||||||||| Sbjct: 2977 tgggggataagctccatagtcaagagggaaacagccc 3013
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 256 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 315 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 316 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 375 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 376 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 435 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 436 ggttctccccgaaatgcgttgaggcg 461 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 139 bits (70), Expect = 1e-29 Identities = 121/138 (87%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||||||| ||||||||||| || |||||||||| | |||||||| |||| ||| || Sbjct: 2411 gcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggctaagtactactgtgt 2470 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||| ||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 2471 gaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 2530 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 2531 atagaacatgaaaccgtg 2548 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2582 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2629 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcga 531 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 596 tgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||||| ||| ||| ||||||||||||||| Sbjct: 2978 tgggggataagctccatagtcaagagggaaacagccc 3014
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 248 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 307 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2876 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 2935 Query: 308 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 367 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2936 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2995 Query: 368 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 427 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2996 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 3055 Query: 428 agctagctggttctccccgaaatgcgttgaggcg 461 ||||||||||||||||||||||| |||||||||| Sbjct: 3056 agctagctggttctccccgaaatacgttgaggcg 3089 Score = 139 bits (70), Expect = 1e-29 Identities = 121/138 (87%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||| ||| ||||||||||| || |||||||||| | |||||||| |||| ||| || Sbjct: 2638 gcacgtgaaattccgtgtgaatccgcgaggaccacctcgtaaggctaagtactactgtgt 2697 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||||||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 2698 gaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 2757 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 2758 atagaacatgaaaccgtg 2775 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2809 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2856 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 3127 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 3177 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 596 tgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||||| ||| ||||||||||||||||||| Sbjct: 3205 tgggggataagctccatggtcgagagggaaacagccc 3241
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 1e-60 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 256 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 315 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 316 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 375 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 376 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 435 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 436 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 492 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 493 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 547 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 99.6 bits (50), Expect = 1e-17 Identities = 116/138 (84%) Strand = Plus / Plus Query: 1 ggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctggg 60 |||||||| ||||||||||||||| || |||||| | ||||||||||| ||| | | Sbjct: 12 ggcacgtgaaatcccgtgtgaatctgcctcgaccacgaggtaaggctaaatattcccgtg 71 Query: 61 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtga 120 |||||||||| ||| ||||||| ||||||||||||||||||||||| ||| ||||| Sbjct: 72 tgaccgatagagaaacagtaccgcgagggaaaggtgaaaagaaccccggaaggggagtga 131 Query: 121 aatagaacgtgaaaccgt 138 |||||||| ||||||||| Sbjct: 132 aatagaacatgaaaccgt 149 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 584 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 642 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 624 Score = 65.9 bits (33), Expect = 2e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 174 tctgaccgcgtgcctgttgaagaatgagccggcgact 210 |||||||| |||||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcgact 218
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 256 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 315 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 316 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 375 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 376 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 435 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 436 ggttctccccgaaatgcgttgaggcg 461 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 139 bits (70), Expect = 1e-29 Identities = 121/138 (87%) Strand = Plus / Minus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||||||| ||||||||||| || |||||||||| | |||||||| |||| ||| || Sbjct: 20470 gcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggctaagtactactgtgt 20411 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||| ||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 20410 gaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 20351 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 20350 atagaacatgaaaccgtg 20333 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 20299 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 20252 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcga 531 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 596 tgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||||| ||| ||| ||||||||||||||| Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagccc 19867
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 256 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 315 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 316 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 375 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 376 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 435 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 436 ggttctccccgaaatgcgttgaggcg 461 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 139 bits (70), Expect = 1e-29 Identities = 121/138 (87%) Strand = Plus / Minus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||||||| ||||||||||| || |||||||||| | |||||||| |||| ||| || Sbjct: 2224 gcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggctaagtactactgtgt 2165 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||| ||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 2164 gaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 2105 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 2104 atagaacatgaaaccgtg 2087 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2053 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2006 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcga 531 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 596 tgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||||| ||| ||| ||||||||||||||| Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagccc 1621
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 256 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 315 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 316 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 375 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 376 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 435 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 436 ggttctccccgaaatgcgttgaggcg 461 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 139 bits (70), Expect = 1e-29 Identities = 121/138 (87%) Strand = Plus / Plus Query: 2 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 61 ||||||||||| ||||||||||| || |||||||||| | |||||||| |||| ||| || Sbjct: 315476 gcacgtggaattccgtgtgaatctgcgaggaccacctcgtaaggctaagtactactgtgt 315535 Query: 62 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 121 ||||||||| ||| ||||||| ||||||||||||||||||||||| | ||| |||||| Sbjct: 315536 gaccgatagtgaaacagtaccgcgagggaaaggtgaaaagaaccccgggaggggagtgaa 315595 Query: 122 atagaacgtgaaaccgtg 139 ||||||| |||||||||| Sbjct: 315596 atagaacatgaaaccgtg 315613 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 176 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 223 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 315647 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 315694 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 497 tttcggtgcgggctgcgcgagcggtaccaaatcga 531 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 596 tgggggataagcttcatcgtcgagagggaaacagccc 632 ||||||||||||| ||| ||| ||||||||||||||| Sbjct: 316043 tgggggataagctccatagtcaagagggaaacagccc 316079 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,870,679 Number of Sequences: 3902068 Number of extensions: 3870679 Number of successful extensions: 104895 Number of sequences better than 10.0: 25509 Number of HSP's better than 10.0 without gapping: 25351 Number of HSP's successfully gapped in prelim test: 198 Number of HSP's that attempted gapping in prelim test: 61029 Number of HSP's gapped (non-prelim): 42005 length of query: 642 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 619 effective length of database: 17,143,297,704 effective search space: 10611701278776 effective search space used: 10611701278776 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
