ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd22e04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY483150.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA1) mRNA, complete cds Length = 3605 Score = 1068 bits (539), Expect = 0.0 Identities = 545/547 (99%) Strand = Plus / Plus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2724 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 2783 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2784 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 2843 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2844 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 2903 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2904 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 2963 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2964 tgagctctacatgttcaagcggacgacgcttctcatccctccgacgaccatcttgatcat 3023 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3024 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 3083 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3084 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 3143 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3144 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 3203 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcactacacgtct 649 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 3204 cctcctggcttcaatcttctccttgctgtgggtttgtgttgatccattcactacacgtct 3263 Query: 650 cgctggc 656 ||||||| Sbjct: 3264 cgctggc 3270
>dbj|AB158407.1| Triticum aestivum CesA mRNA for putative cellulose synthase, complete cds Length = 3681 Score = 1013 bits (511), Expect = 0.0 Identities = 538/547 (98%) Strand = Plus / Plus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 2749 caacttggccagtatctggttcattgctctcttcctttcaattttcgccactggtatcct 2808 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2809 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 2868 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2869 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 2928 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2929 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 2988 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2989 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccattttgatcat 3048 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 3049 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcatg 3108 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 3109 ggggccgctctttgggaagctcttctttgccttctgggtgattgttcacttatacccatt 3168 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3169 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 3228 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcactacacgtct 649 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 3229 cctcctcgcttctatcttctccttgctgtgggttcgtgttgatccattcactacccgtct 3288 Query: 650 cgctggc 656 ||||||| Sbjct: 3289 cgctggc 3295
>gb|BT009583.1| Triticum aestivum clone wre1n.pk0043.h8:fis, full insert mRNA sequence Length = 993 Score = 981 bits (495), Expect = 0.0 Identities = 534/547 (97%) Strand = Plus / Plus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 ||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 202 caacttggccagtatctggttcattgcgctcttcctttcaattttcgccactggtatcct 261 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 321 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 322 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 381 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 382 aggtatcgacaccaacttcactgtcacctcaaaggctaatgatgaagaaggcgactttgc 441 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 442 tgagctctacatgttcaagtggacgacgcttcttatccctccgacgaccattttgatcat 501 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 502 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcatg 561 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 562 ggggccgctctttgggaagctcttctttgccttctgggtgattgttcacttatacccatt 621 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 622 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 681 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcactacacgtct 649 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 682 cctcctcgcttctatcttctccttgctgtgggttcgtgttgatccattcactacccgtct 741 Query: 650 cgctggc 656 ||||||| Sbjct: 742 cgctggc 748
>gb|BT009438.1| Triticum aestivum clone wlmk4.pk0015.a11:fis, full insert mRNA sequence Length = 3626 Score = 981 bits (495), Expect = 0.0 Identities = 534/547 (97%) Strand = Plus / Plus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 ||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 2723 caacttggccagtatctggttcattgcgctcttcctttcaattttcgccactggtatcct 2782 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2783 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 2842 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2843 cattggaggtatctctgcacatctgtttgccgtctttcagggtcttctgaaggtgcttgc 2902 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2903 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 2962 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2963 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccattttgatcat 3022 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 3023 taacatggttggtgtcgttgctggcacctcctacgccatcaacagtggttaccaatcatg 3082 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 3083 ggggccgctctttgggaagctcttctttgccttctgggtgattgttcacttatacccatt 3142 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3143 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 3202 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcactacacgtct 649 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 3203 cctcctcgcttctatcttctccttgctgtgggttcgtgttgatccattcactacccgtct 3262 Query: 650 cgctggc 656 ||||||| Sbjct: 3263 cgctggc 3269
>gb|DQ020212.1| Bambusa oldhamii cellulose synthase BoCesA4b mRNA, partial cds Length = 3409 Score = 664 bits (335), Expect = 0.0 Identities = 482/531 (90%) Strand = Plus / Plus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| || ||||| |||||||| |||||||| |||||||||| ||||| |||||||| Sbjct: 2625 caactttgctagtatttggttcatctctctcttcatttcaattttcgccactggtatcct 2684 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 2685 tgagatgaggtggagtggtgttggtatcgacgagtggtggaggaatgaacagttctgggt 2744 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 ||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| Sbjct: 2745 tattggaggtatctctgcccatctttttgcggtctttcagggtcttctaaaggtgcttgc 2804 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 |||||||| |||||||||||||||||||||||||||| ||| |||||||| |||||||| Sbjct: 2805 tggtatcgataccaacttcactgtcacctcaaaggctactgatgaagaaggtgactttgc 2864 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 ||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 2865 tgagctctacatgttcaagtggacgacgcttctcatcccaccgacaaccattttgatcat 2924 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 |||| |||| |||||||||||||||| |||||| || |||||||| || |||||||| || Sbjct: 2925 taacctggttggtgtcgttgctggtatctcctatgcgatcaacagcggctaccaatcatg 2984 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 |||||| ||||| ||||||||||||||||| |||||||||||||||||||| ||||| || Sbjct: 2985 ggggccactctttgggaagctcttctttgctttctgggtgattgttcacttgtacccatt 3044 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 |||||||||||| ||||| |||||||||||||| ||||| ||||| | |||||||| | Sbjct: 3045 cctcaagggtctcatgggtaggcaaaaccgcacgccgaccattgttgttgtctgggcaat 3104 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcac 640 |||||| ||||| ||||||||||||||||||||||| ||||||| ||||| Sbjct: 3105 cctccttgcttcgatcttctccttgctgtgggttcgcattgatccgttcac 3155
>gb|DQ020211.1| Bambusa oldhamii cellulose synthase BoCesA4a mRNA, complete cds Length = 3756 Score = 638 bits (322), Expect = e-180 Identities = 460/506 (90%) Strand = Plus / Plus Query: 120 agtatctggttcattgctctcttcctttcaatttttgccaccggtatccttgagatgagg 179 ||||| |||||||| |||||||| |||||||||| ||||| |||||||||||||||||| Sbjct: 2913 agtatttggttcatctctctcttcatttcaattttcgccactggtatccttgagatgagg 2972 Query: 180 tggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattggaggt 239 ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2973 tggagtggtgttggcatcgatgagtggtggaggaatgaacagttctgggttattggaggt 3032 Query: 240 atctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggtatcgac 299 |||||||||||||| || |||||||||||||||||||| ||||||||||| |||||||| Sbjct: 3033 atctctgcccatcttttcgccgtctttcagggtcttctcaaggtgcttgctggtatcgat 3092 Query: 300 accaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgctgagctctac 359 ||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||| Sbjct: 3093 accaacttcactgtcacctcaaaggcttctgatgaagaaggtgactttgctgagctctac 3152 Query: 360 atgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcattaacatggtc 419 ||||||||||||||||||||||| ||||| || |||||||| |||||||||||| ||||| Sbjct: 3153 atgttcaagtggacgacgcttcttatcccgccaacgaccattttgatcattaacctggtc 3212 Query: 420 ggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttgggggccgctc 479 |||||||||||||||| ||||||||| |||||||| || |||||||| |||||||| ||| Sbjct: 3213 ggtgtcgttgctggtatctcctacgcgatcaacagcggctaccaatcatgggggccactc 3272 Query: 480 ttcgggaagctcttctttgccttctgggtgattgttcacttataccccttcctcaagggt 539 || |||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 3273 tttgggaagctcttctttgccttctgggtgattgttcacttgtacccattcctgaagggt 3332 Query: 540 cttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgtcctcctggct 599 || ||||| ||||||||||||||||| || ||||| |||||||||| | ||||| || Sbjct: 3333 ctcatgggtaggcaaaaccgcacaccaaccattgttgtcgtctgggcaattctccttgcc 3392 Query: 600 tcaatcttctccttgctgtgggttcg 625 || |||||||||||| |||||||||| Sbjct: 3393 tccatcttctccttgttgtgggttcg 3418
>ref|XM_477093.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3954 Score = 624 bits (315), Expect = e-176 Identities = 477/531 (89%) Strand = Plus / Plus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| || ||||| |||||||| |||||||| |||||||||||||||| |||||||| Sbjct: 3103 caactttgctagtatttggttcatctctctcttcatttcaatttttgccactggtatcct 3162 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 3163 tgagatgaggtggagtggtgttggcatcgatgagtggtggaggaatgaacagttctgggt 3222 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 ||||||||||| ||||| ||||| ||||||||||| |||||||| || ||||||||||| Sbjct: 3223 tattggaggtatatctgcgcatctttttgccgtcttccagggtctcctcaaggtgcttgc 3282 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 |||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||| Sbjct: 3283 tggtatcgacaccaatttcactgtcacctcaaaggcttctgatgaagatggcgactttgc 3342 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 3343 tgagctctacatgttcaagtggacaacgcttctcatcccaccgacgaccatcttgatcat 3402 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 |||| |||||||||| |||||||||| ||| ||||| |||||||| || |||||||| || Sbjct: 3403 taacctggtcggtgttgttgctggtatctcatacgcgatcaacagcggctaccaatcatg 3462 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| |||||||| || ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 3463 gggaccgctctttggcaagctcttctttgccttctgggtgattgtccacttgtacccctt 3522 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 |||||||||||||||||| ||||||||||||| ||||| || || | || ||||| | Sbjct: 3523 cctcaagggtcttatgggtcggcaaaaccgcactccgaccatcgttgttgtttgggcaat 3582 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcac 640 ||| |||||||| |||||||| |||||||||||||| | ||||||||||| Sbjct: 3583 ccttctggcttcgatcttctcattgctgtgggttcgcatcgatccattcac 3633
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 624 bits (315), Expect = e-176 Identities = 477/531 (89%) Strand = Plus / Minus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| || ||||| |||||||| |||||||| |||||||||||||||| |||||||| Sbjct: 5885786 caactttgctagtatttggttcatctctctcttcatttcaatttttgccactggtatcct 5885727 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 5885726 tgagatgaggtggagtggtgttggcatcgatgagtggtggaggaatgaacagttctgggt 5885667 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 ||||||||||| ||||| ||||| ||||||||||| |||||||| || ||||||||||| Sbjct: 5885666 tattggaggtatatctgcgcatctttttgccgtcttccagggtctcctcaaggtgcttgc 5885607 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 |||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||| Sbjct: 5885606 tggtatcgacaccaatttcactgtcacctcaaaggcttctgatgaagatggcgactttgc 5885547 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 5885546 tgagctctacatgttcaagtggacaacgcttctcatcccaccgacgaccatcttgatcat 5885487 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 |||| |||||||||| |||||||||| ||| ||||| |||||||| || |||||||| || Sbjct: 5885486 taacctggtcggtgttgttgctggtatctcatacgcgatcaacagcggctaccaatcatg 5885427 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| |||||||| || ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 5885426 gggaccgctctttggcaagctcttctttgccttctgggtgattgtccacttgtacccctt 5885367 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 |||||||||||||||||| ||||||||||||| ||||| || || | || ||||| | Sbjct: 5885366 cctcaagggtcttatgggtcggcaaaaccgcactccgaccatcgttgttgtttgggcaat 5885307 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcac 640 ||| |||||||| |||||||| |||||||||||||| | ||||||||||| Sbjct: 5885306 ccttctggcttcgatcttctcattgctgtgggttcgcatcgatccattcac 5885256 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14180438 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 14180379 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14180378 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 14180325 Score = 165 bits (83), Expect = 2e-37 Identities = 83/83 (100%) Strand = Plus / Minus Query: 7 acgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaa 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22367662 acgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaa 22367603 Query: 67 cgggtgagtaacgcgtaagaacc 89 ||||||||||||||||||||||| Sbjct: 22367602 cgggtgagtaacgcgtaagaacc 22367580 Score = 151 bits (76), Expect = 3e-33 Identities = 85/88 (96%) Strand = Plus / Plus Query: 27 acatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgtaaga 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21822623 acatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgtaaga 21822682 Query: 87 acctgcccttgggaggggaacaacaact 114 |||| |||||||||| |||| ||||||| Sbjct: 21822683 acctacccttgggagaggaaaaacaact 21822710 Score = 103 bits (52), Expect = 7e-19 Identities = 124/148 (83%) Strand = Plus / Plus Query: 463 aatcttgggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttat 522 |||| ||||| || || |||||||||||||||||||| |||||||||||||| || ||| Sbjct: 8533166 aatcatggggacctctgttcgggaagctcttctttgcattctgggtgattgtccatctat 8533225 Query: 523 accccttcctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtct 582 | || |||||||||||| | | || ||||||||| | ||||| |||||||| ||||||| Sbjct: 8533226 atccgttcctcaagggtttggttggaaggcaaaacaggacaccaacgattgttatcgtct 8533285 Query: 583 gggctgtcctcctggcttcaatcttctc 610 || | | || ||||||||||||||||| Sbjct: 8533286 ggtccattctactggcttcaatcttctc 8533313 Score = 95.6 bits (48), Expect = 2e-16 Identities = 144/176 (81%) Strand = Plus / Plus Query: 150 atttttgccaccggtatccttgagatgaggtggagtggtgttggcattgacgagtggtgg 209 ||||||| ||| || |||||||| ||||| ||||||||||| | ||| || || |||||| Sbjct: 8532856 atttttgtcactggcatccttgaaatgagatggagtggtgtggccatcgatgactggtgg 8532915 Query: 210 aggaatgaacagttctgggtcattggaggtatctctgcccatctgtttgccgtctttcag 269 |||||||| ||||| ||||||||||||||| | ||| | ||||| || || || || || Sbjct: 8532916 aggaatgagcagttttgggtcattggaggtgtttcttcacatctcttcgctgtattccaa 8532975 Query: 270 ggtcttctgaaggtgcttgccggtatcgacaccaacttcactgtcacctcaaaggc 325 || |||||||| || ||||| ||| | || |||| ||||||||| || |||||||| Sbjct: 8532976 ggacttctgaaagtccttgctggtgttgataccagcttcactgtgacatcaaaggc 8533031 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Minus Query: 150 atttttgccaccggtatccttgagatgaggtggagtggtgttggcattgacgagtggtgg 209 |||||||| || || ||||| || ||||| |||||||||||||||||||| || |||||| Sbjct: 13689101 atttttgctactggcatcctggaaatgagatggagtggtgttggcattgatgattggtgg 13689042 Query: 210 aggaatgaacagttctgggtcattggagg 238 || |||||||| || |||||||||||||| Sbjct: 13689041 agaaatgaacaattttgggtcattggagg 13689013 Score = 63.9 bits (32), Expect = 6e-07 Identities = 119/148 (80%) Strand = Plus / Minus Query: 463 aatcttgggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttat 522 |||| ||||| || ||||||||||||||||||||||| || |||||||| || || | | Sbjct: 13688791 aatcatggggacccctcttcgggaagctcttctttgcattttgggtgatcgtccatcttt 13688732 Query: 523 accccttcctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtct 582 |||| |||||||| ||| | | || ||||||||| | || || || ||||| || |||| Sbjct: 13688731 acccattcctcaaaggtttggttggaaggcaaaacaggacgccaacaattgttattgtct 13688672 Query: 583 gggctgtcctcctggcttcaatcttctc 610 || | | || ||||||||||||||||| Sbjct: 13688671 ggtccattcttctggcttcaatcttctc 13688644
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 624 bits (315), Expect = e-176 Identities = 477/531 (89%) Strand = Plus / Minus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| || ||||| |||||||| |||||||| |||||||||||||||| |||||||| Sbjct: 28234 caactttgctagtatttggttcatctctctcttcatttcaatttttgccactggtatcct 28175 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 28174 tgagatgaggtggagtggtgttggcatcgatgagtggtggaggaatgaacagttctgggt 28115 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 ||||||||||| ||||| ||||| ||||||||||| |||||||| || ||||||||||| Sbjct: 28114 tattggaggtatatctgcgcatctttttgccgtcttccagggtctcctcaaggtgcttgc 28055 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 |||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||| Sbjct: 28054 tggtatcgacaccaatttcactgtcacctcaaaggcttctgatgaagatggcgactttgc 27995 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 27994 tgagctctacatgttcaagtggacaacgcttctcatcccaccgacgaccatcttgatcat 27935 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 |||| |||||||||| |||||||||| ||| ||||| |||||||| || |||||||| || Sbjct: 27934 taacctggtcggtgttgttgctggtatctcatacgcgatcaacagcggctaccaatcatg 27875 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| |||||||| || ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 27874 gggaccgctctttggcaagctcttctttgccttctgggtgattgtccacttgtacccctt 27815 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 |||||||||||||||||| ||||||||||||| ||||| || || | || ||||| | Sbjct: 27814 cctcaagggtcttatgggtcggcaaaaccgcactccgaccatcgttgttgtttgggcaat 27755 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcac 640 ||| |||||||| |||||||| |||||||||||||| | ||||||||||| Sbjct: 27754 ccttctggcttcgatcttctcattgctgtgggttcgcatcgatccattcac 27704
>dbj|AP003837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1559_F09 Length = 87792 Score = 624 bits (315), Expect = e-176 Identities = 477/531 (89%) Strand = Plus / Minus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| || ||||| |||||||| |||||||| |||||||||||||||| |||||||| Sbjct: 60460 caactttgctagtatttggttcatctctctcttcatttcaatttttgccactggtatcct 60401 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 60400 tgagatgaggtggagtggtgttggcatcgatgagtggtggaggaatgaacagttctgggt 60341 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 ||||||||||| ||||| ||||| ||||||||||| |||||||| || ||||||||||| Sbjct: 60340 tattggaggtatatctgcgcatctttttgccgtcttccagggtctcctcaaggtgcttgc 60281 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 |||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||| Sbjct: 60280 tggtatcgacaccaatttcactgtcacctcaaaggcttctgatgaagatggcgactttgc 60221 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 60220 tgagctctacatgttcaagtggacaacgcttctcatcccaccgacgaccatcttgatcat 60161 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 |||| |||||||||| |||||||||| ||| ||||| |||||||| || |||||||| || Sbjct: 60160 taacctggtcggtgttgttgctggtatctcatacgcgatcaacagcggctaccaatcatg 60101 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| |||||||| || ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 60100 gggaccgctctttggcaagctcttctttgccttctgggtgattgtccacttgtacccctt 60041 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 |||||||||||||||||| ||||||||||||| ||||| || || | || ||||| | Sbjct: 60040 cctcaagggtcttatgggtcggcaaaaccgcactccgaccatcgttgttgtttgggcaat 59981 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcac 640 ||| |||||||| |||||||| |||||||||||||| | ||||||||||| Sbjct: 59980 ccttctggcttcgatcttctcattgctgtgggttcgcatcgatccattcac 59930
>dbj|AK072356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023059I02, full insert sequence Length = 3954 Score = 624 bits (315), Expect = e-176 Identities = 477/531 (89%) Strand = Plus / Plus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| || ||||| |||||||| |||||||| |||||||||||||||| |||||||| Sbjct: 3103 caactttgctagtatttggttcatctctctcttcatttcaatttttgccactggtatcct 3162 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 3163 tgagatgaggtggagtggtgttggcatcgatgagtggtggaggaatgaacagttctgggt 3222 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 ||||||||||| ||||| ||||| ||||||||||| |||||||| || ||||||||||| Sbjct: 3223 tattggaggtatatctgcgcatctttttgccgtcttccagggtctcctcaaggtgcttgc 3282 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 |||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||| Sbjct: 3283 tggtatcgacaccaatttcactgtcacctcaaaggcttctgatgaagatggcgactttgc 3342 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 3343 tgagctctacatgttcaagtggacaacgcttctcatcccaccgacgaccatcttgatcat 3402 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 |||| |||||||||| |||||||||| ||| ||||| |||||||| || |||||||| || Sbjct: 3403 taacctggtcggtgttgttgctggtatctcatacgcgatcaacagcggctaccaatcatg 3462 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| |||||||| || ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 3463 gggaccgctctttggcaagctcttctttgccttctgggtgattgtccacttgtacccctt 3522 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 |||||||||||||||||| ||||||||||||| ||||| || || | || ||||| | Sbjct: 3523 cctcaagggtcttatgggtcggcaaaaccgcactccgaccatcgttgttgtttgggcaat 3582 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcac 640 ||| |||||||| |||||||| |||||||||||||| | ||||||||||| Sbjct: 3583 ccttctggcttcgatcttctcattgctgtgggttcgcatcgatccattcac 3633
>dbj|AK062007.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-E01, full insert sequence Length = 1241 Score = 624 bits (315), Expect = e-176 Identities = 477/531 (89%) Strand = Plus / Plus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| || ||||| |||||||| |||||||| |||||||||||||||| |||||||| Sbjct: 390 caactttgctagtatttggttcatctctctcttcatttcaatttttgccactggtatcct 449 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 450 tgagatgaggtggagtggtgttggcatcgatgagtggtggaggaatgaacagttctgggt 509 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 ||||||||||| ||||| ||||| ||||||||||| |||||||| || ||||||||||| Sbjct: 510 tattggaggtatatctgcgcatctttttgccgtcttccagggtctcctcaaggtgcttgc 569 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 |||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||||| Sbjct: 570 tggtatcgacaccaatttcactgtcacctcaaaggcttctgatgaagatggcgactttgc 629 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 630 tgagctctacatgttcaagtggacaacgcttctcatcccaccgacgaccatcttgatcat 689 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 |||| |||||||||| |||||||||| ||| ||||| |||||||| || |||||||| || Sbjct: 690 taacctggtcggtgttgttgctggtatctcatacgcgatcaacagcggctaccaatcatg 749 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| |||||||| || ||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 750 gggaccgctctttggcaagctcttctttgccttctgggtgattgtccacttgtacccctt 809 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 |||||||||||||||||| ||||||||||||| ||||| || || | || ||||| | Sbjct: 810 cctcaagggtcttatgggtcggcaaaaccgcactccgaccatcgttgttgtttgggcaat 869 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcac 640 ||| |||||||| |||||||| |||||||||||||| | ||||||||||| Sbjct: 870 ccttctggcttcgatcttctcattgctgtgggttcgcatcgatccattcac 920
>gb|DQ020213.1| Bambusa oldhamii cellulose synthase BoCesA5 mRNA, complete cds Length = 3613 Score = 569 bits (287), Expect = e-159 Identities = 470/531 (88%) Strand = Plus / Plus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| || ||||||||||| || ||||||| || ||||| |||||||| |||||||| Sbjct: 2872 caactttgcgagtatctggtttatctctctctttctatcaatctttgccacgggtatcct 2931 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2932 tgagatgaggtggagtggtgttggcatcgacgagtggtggaggaatgaacagttctgggt 2991 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 ||||||||||| ||||| ||||| || || ||||| |||||||| |||||||||||||| Sbjct: 2992 tattggaggtatttctgcacatctattcgctgtcttccagggtctcctgaaggtgcttgc 3051 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 ||||| ||||||| ||||||||||||||||||||| ||| |||||||| || ||| | Sbjct: 3052 tggtattgacaccagcttcactgtcacctcaaaggcctctgatgaagaaggtgattttac 3111 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 |||||||||||||||||||||||| || ||||| ||||| |||||||| || |||||||| Sbjct: 3112 tgagctctacatgttcaagtggactactcttctgatcccaccgacgactattttgatcat 3171 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 ||| |||||||||| |||||||||| ||||||||| |||||||| |||||||| || || Sbjct: 3172 caacctggtcggtgttgttgctggtatctcctacgcgatcaacagcggttaccagtcatg 3231 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| |||||||| |||||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 3232 gggaccgctctttgggaagctcttcttcgccttctgggtgattgtccacttgtacccctt 3291 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 ||| |||||||| ||||| |||| |||||||||||||| ||||| |||||||||| | Sbjct: 3292 ccttaagggtctcatgggtcggcagaaccgcacaccgaccattgttgtcgtctgggccat 3351 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcac 640 |||||| || || |||||||||||||||||||||||| ||||||||||||| Sbjct: 3352 cctccttgcatctatcttctccttgctgtgggttcgtattgatccattcac 3402
>ref|XM_470040.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3607 Score = 474 bits (239), Expect = e-130 Identities = 458/531 (86%) Strand = Plus / Plus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| || ||||| ||||| || ||||||| || ||||| ||||| || |||||||| Sbjct: 3028 caactttgcgagtatttggtttatctctctctttctgtcaatctttgctactggtatcct 3087 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 ||||||||||||||||||||||||||| || || |||||||||||||| ||||| ||||| Sbjct: 3088 tgagatgaggtggagtggtgttggcatcgatgaatggtggaggaatgagcagttttgggt 3147 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 ||||||||||| || || ||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 3148 tattggaggtatttccgctcatctatttgcggtcttccagggtctgctgaaggtgcttgc 3207 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 || || || |||| ||||||||||||||||||||| ||| ||||||||||| || || Sbjct: 3208 tggaattgataccagcttcactgtcacctcaaaggcctctgatgaagaaggcgatttcgc 3267 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 |||||||||||||||||||||||| || ||||| ||||| ||||| || || |||||||| Sbjct: 3268 tgagctctacatgttcaagtggacaacccttctgatcccaccgaccactattttgatcat 3327 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 ||| |||||||||| |||||||||| ||||||||| ||||||||||| ||||| || || Sbjct: 3328 caacctggtcggtgttgttgctggtatctcctacgctatcaacagtggctaccagtcatg 3387 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| |||||||| |||||||||||||||||||||||||||||||| ||| | |||||||| Sbjct: 3388 gggtccgctctttgggaagctcttctttgccttctgggtgattgtccacctgtacccctt 3447 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 ||| |||||||| ||||| |||| ||||| |||||||| ||||| | || ||||| | Sbjct: 3448 ccttaagggtctcatgggtcggcagaaccgtacaccgaccattgttgttgtttgggccat 3507 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcac 640 |||||| || || |||||||||||||||||||||||| | ||||||||||| Sbjct: 3508 cctccttgcatcgatcttctccttgctgtgggttcgtatcgatccattcac 3558
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 474 bits (239), Expect = e-130 Identities = 458/531 (86%) Strand = Plus / Minus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| || ||||| ||||| || ||||||| || ||||| ||||| || |||||||| Sbjct: 33477454 caactttgcgagtatttggtttatctctctctttctgtcaatctttgctactggtatcct 33477395 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 ||||||||||||||||||||||||||| || || |||||||||||||| ||||| ||||| Sbjct: 33477394 tgagatgaggtggagtggtgttggcatcgatgaatggtggaggaatgagcagttttgggt 33477335 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 ||||||||||| || || ||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 33477334 tattggaggtatttccgctcatctatttgcggtcttccagggtctgctgaaggtgcttgc 33477275 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 || || || |||| ||||||||||||||||||||| ||| ||||||||||| || || Sbjct: 33477274 tggaattgataccagcttcactgtcacctcaaaggcctctgatgaagaaggcgatttcgc 33477215 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 |||||||||||||||||||||||| || ||||| ||||| ||||| || || |||||||| Sbjct: 33477214 tgagctctacatgttcaagtggacaacccttctgatcccaccgaccactattttgatcat 33477155 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 ||| |||||||||| |||||||||| ||||||||| ||||||||||| ||||| || || Sbjct: 33477154 caacctggtcggtgttgttgctggtatctcctacgctatcaacagtggctaccagtcatg 33477095 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| |||||||| |||||||||||||||||||||||||||||||| ||| | |||||||| Sbjct: 33477094 gggtccgctctttgggaagctcttctttgccttctgggtgattgtccacctgtacccctt 33477035 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 ||| |||||||| ||||| |||| ||||| |||||||| ||||| | || ||||| | Sbjct: 33477034 ccttaagggtctcatgggtcggcagaaccgtacaccgaccattgttgttgtttgggccat 33476975 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcac 640 |||||| || || |||||||||||||||||||||||| | ||||||||||| Sbjct: 33476974 cctccttgcatcgatcttctccttgctgtgggttcgtatcgatccattcac 33476924 Score = 85.7 bits (43), Expect = 2e-13 Identities = 124/151 (82%) Strand = Plus / Plus Query: 174 atgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcatt 233 ||||| ||||||||||| ||||| || || ||||||||||| || ||||| ||||||||| Sbjct: 34878287 atgagatggagtggtgtaggcatcgatgattggtggaggaacgagcagttttgggtcatt 34878346 Query: 234 ggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggt 293 |||||| ||||| | ||||| ||||| || || || || ||||| ||||| | || ||| Sbjct: 34878347 ggaggtgtctcttcacatctctttgctgtgttccaaggacttctcaaggtcatagctggt 34878406 Query: 294 atcgacaccaacttcactgtcacctcaaagg 324 ||||| || | ||||||||| || ||||||| Sbjct: 34878407 atcgatacaagcttcactgtgacatcaaagg 34878437 Score = 71.9 bits (36), Expect = 3e-09 Identities = 120/148 (81%) Strand = Plus / Plus Query: 463 aatcttgggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttat 522 |||| |||||||||||||| |||||||| |||||||| || ||||||||||| || | | Sbjct: 34878573 aatcatgggggccgctctttgggaagctgttctttgcattttgggtgattgtccatctgt 34878632 Query: 523 accccttcctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtct 582 | || ||| | |||||| | | || ||||||||| | ||||| || |||||||| |||| Sbjct: 34878633 atccgttcttgaagggtttggttggaaggcaaaacaggacaccaacaattgtcattgtct 34878692 Query: 583 gggctgtcctcctggcttcaatcttctc 610 || | | || ||||||||||||||||| Sbjct: 34878693 ggtccattctgctggcttcaatcttctc 34878720 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 43 ggaagtggtgtttccagtggcgaacgggtgagtaacgcgtaagaacctgccct 95 ||||||||||||| || ||| | ||||||||||||| |||| ||| ||||||| Sbjct: 4494589 ggaagtggtgttttcaatggtgcacgggtgagtaacacgtacgaatctgccct 4494641
>gb|AC145384.2| Oryza sativa chromosome 3 BAC OSJNBa0060M17 genomic sequence, complete sequence Length = 41693 Score = 474 bits (239), Expect = e-130 Identities = 458/531 (86%) Strand = Plus / Minus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| || ||||| ||||| || ||||||| || ||||| ||||| || |||||||| Sbjct: 6681 caactttgcgagtatttggtttatctctctctttctgtcaatctttgctactggtatcct 6622 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 ||||||||||||||||||||||||||| || || |||||||||||||| ||||| ||||| Sbjct: 6621 tgagatgaggtggagtggtgttggcatcgatgaatggtggaggaatgagcagttttgggt 6562 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 ||||||||||| || || ||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 6561 tattggaggtatttccgctcatctatttgcggtcttccagggtctgctgaaggtgcttgc 6502 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 || || || |||| ||||||||||||||||||||| ||| ||||||||||| || || Sbjct: 6501 tggaattgataccagcttcactgtcacctcaaaggcctctgatgaagaaggcgatttcgc 6442 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 |||||||||||||||||||||||| || ||||| ||||| ||||| || || |||||||| Sbjct: 6441 tgagctctacatgttcaagtggacaacccttctgatcccaccgaccactattttgatcat 6382 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 ||| |||||||||| |||||||||| ||||||||| ||||||||||| ||||| || || Sbjct: 6381 caacctggtcggtgttgttgctggtatctcctacgctatcaacagtggctaccagtcatg 6322 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| |||||||| |||||||||||||||||||||||||||||||| ||| | |||||||| Sbjct: 6321 gggtccgctctttgggaagctcttctttgccttctgggtgattgtccacctgtacccctt 6262 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 ||| |||||||| ||||| |||| ||||| |||||||| ||||| | || ||||| | Sbjct: 6261 ccttaagggtctcatgggtcggcagaaccgtacaccgaccattgttgttgtttgggccat 6202 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcac 640 |||||| || || |||||||||||||||||||||||| | ||||||||||| Sbjct: 6201 cctccttgcatcgatcttctccttgctgtgggttcgtatcgatccattcac 6151
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 474 bits (239), Expect = e-130 Identities = 458/531 (86%) Strand = Plus / Plus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| || ||||| ||||| || ||||||| || ||||| ||||| || |||||||| Sbjct: 20657 caactttgcgagtatttggtttatctctctctttctgtcaatctttgctactggtatcct 20716 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 ||||||||||||||||||||||||||| || || |||||||||||||| ||||| ||||| Sbjct: 20717 tgagatgaggtggagtggtgttggcatcgatgaatggtggaggaatgagcagttttgggt 20776 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 ||||||||||| || || ||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 20777 tattggaggtatttccgctcatctatttgcggtcttccagggtctgctgaaggtgcttgc 20836 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 || || || |||| ||||||||||||||||||||| ||| ||||||||||| || || Sbjct: 20837 tggaattgataccagcttcactgtcacctcaaaggcctctgatgaagaaggcgatttcgc 20896 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 |||||||||||||||||||||||| || ||||| ||||| ||||| || || |||||||| Sbjct: 20897 tgagctctacatgttcaagtggacaacccttctgatcccaccgaccactattttgatcat 20956 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 ||| |||||||||| |||||||||| ||||||||| ||||||||||| ||||| || || Sbjct: 20957 caacctggtcggtgttgttgctggtatctcctacgctatcaacagtggctaccagtcatg 21016 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| |||||||| |||||||||||||||||||||||||||||||| ||| | |||||||| Sbjct: 21017 gggtccgctctttgggaagctcttctttgccttctgggtgattgtccacctgtacccctt 21076 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 ||| |||||||| ||||| |||| ||||| |||||||| ||||| | || ||||| | Sbjct: 21077 ccttaagggtctcatgggtcggcagaaccgtacaccgaccattgttgttgtttgggccat 21136 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcac 640 |||||| || || |||||||||||||||||||||||| | ||||||||||| Sbjct: 21137 cctccttgcatcgatcttctccttgctgtgggttcgtatcgatccattcac 21187
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 474 bits (239), Expect = e-130 Identities = 458/531 (86%) Strand = Plus / Minus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| || ||||| ||||| || ||||||| || ||||| ||||| || |||||||| Sbjct: 33567964 caactttgcgagtatttggtttatctctctctttctgtcaatctttgctactggtatcct 33567905 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 ||||||||||||||||||||||||||| || || |||||||||||||| ||||| ||||| Sbjct: 33567904 tgagatgaggtggagtggtgttggcatcgatgaatggtggaggaatgagcagttttgggt 33567845 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 ||||||||||| || || ||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 33567844 tattggaggtatttccgctcatctatttgcggtcttccagggtctgctgaaggtgcttgc 33567785 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 || || || |||| ||||||||||||||||||||| ||| ||||||||||| || || Sbjct: 33567784 tggaattgataccagcttcactgtcacctcaaaggcctctgatgaagaaggcgatttcgc 33567725 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 |||||||||||||||||||||||| || ||||| ||||| ||||| || || |||||||| Sbjct: 33567724 tgagctctacatgttcaagtggacaacccttctgatcccaccgaccactattttgatcat 33567665 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 ||| |||||||||| |||||||||| ||||||||| ||||||||||| ||||| || || Sbjct: 33567664 caacctggtcggtgttgttgctggtatctcctacgctatcaacagtggctaccagtcatg 33567605 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| |||||||| |||||||||||||||||||||||||||||||| ||| | |||||||| Sbjct: 33567604 gggtccgctctttgggaagctcttctttgccttctgggtgattgtccacctgtacccctt 33567545 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 ||| |||||||| ||||| |||| ||||| |||||||| ||||| | || ||||| | Sbjct: 33567544 ccttaagggtctcatgggtcggcagaaccgtacaccgaccattgttgttgtttgggccat 33567485 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcac 640 |||||| || || |||||||||||||||||||||||| | ||||||||||| Sbjct: 33567484 cctccttgcatcgatcttctccttgctgtgggttcgtatcgatccattcac 33567434 Score = 85.7 bits (43), Expect = 2e-13 Identities = 124/151 (82%) Strand = Plus / Plus Query: 174 atgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcatt 233 ||||| ||||||||||| ||||| || || ||||||||||| || ||||| ||||||||| Sbjct: 34968359 atgagatggagtggtgtaggcatcgatgattggtggaggaacgagcagttttgggtcatt 34968418 Query: 234 ggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggt 293 |||||| ||||| | ||||| ||||| || || || || ||||| ||||| | || ||| Sbjct: 34968419 ggaggtgtctcttcacatctctttgctgtgttccaaggacttctcaaggtcatagctggt 34968478 Query: 294 atcgacaccaacttcactgtcacctcaaagg 324 ||||| || | ||||||||| || ||||||| Sbjct: 34968479 atcgatacaagcttcactgtgacatcaaagg 34968509 Score = 71.9 bits (36), Expect = 3e-09 Identities = 120/148 (81%) Strand = Plus / Plus Query: 463 aatcttgggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttat 522 |||| |||||||||||||| |||||||| |||||||| || ||||||||||| || | | Sbjct: 34968645 aatcatgggggccgctctttgggaagctgttctttgcattttgggtgattgtccatctgt 34968704 Query: 523 accccttcctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtct 582 | || ||| | |||||| | | || ||||||||| | ||||| || |||||||| |||| Sbjct: 34968705 atccgttcttgaagggtttggttggaaggcaaaacaggacaccaacaattgtcattgtct 34968764 Query: 583 gggctgtcctcctggcttcaatcttctc 610 || | | || ||||||||||||||||| Sbjct: 34968765 ggtccattctgctggcttcaatcttctc 34968792 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 43 ggaagtggtgtttccagtggcgaacgggtgagtaacgcgtaagaacctgccct 95 ||||||||||||| || ||| | ||||||||||||| |||| ||| ||||||| Sbjct: 4494704 ggaagtggtgttttcaatggtgcacgggtgagtaacacgtacgaatctgccct 4494756
>dbj|AK069196.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003G18, full insert sequence Length = 4282 Score = 474 bits (239), Expect = e-130 Identities = 458/531 (86%) Strand = Plus / Plus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| || ||||| ||||| || ||||||| || ||||| ||||| || |||||||| Sbjct: 2917 caactttgcgagtatttggtttatctctctctttctgtcaatctttgctactggtatcct 2976 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 ||||||||||||||||||||||||||| || || |||||||||||||| ||||| ||||| Sbjct: 2977 tgagatgaggtggagtggtgttggcatcgatgaatggtggaggaatgagcagttttgggt 3036 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 ||||||||||| || || ||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 3037 tattggaggtatttccgctcatctatttgcggtcttccagggtctgctgaaggtgcttgc 3096 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 || || || |||| ||||||||||||||||||||| ||| ||||||||||| || || Sbjct: 3097 tggaattgataccagcttcactgtcacctcaaaggcctctgatgaagaaggcgatttcgc 3156 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 |||||||||||||||||||||||| || ||||| ||||| ||||| || || |||||||| Sbjct: 3157 tgagctctacatgttcaagtggacaacccttctgatcccaccgaccactattttgatcat 3216 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 ||| |||||||||| |||||||||| ||||||||| ||||||||||| ||||| || || Sbjct: 3217 caacctggtcggtgttgttgctggtatctcctacgctatcaacagtggctaccagtcatg 3276 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| |||||||| |||||||||||||||||||||||||||||||| ||| | |||||||| Sbjct: 3277 gggtccgctctttgggaagctcttctttgccttctgggtgattgtccacctgtacccctt 3336 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 ||| |||||||| ||||| |||| ||||| |||||||| ||||| | || ||||| | Sbjct: 3337 ccttaagggtctcatgggtcggcagaaccgtacaccgaccattgttgttgtttgggccat 3396 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcac 640 |||||| || || |||||||||||||||||||||||| | ||||||||||| Sbjct: 3397 cctccttgcatcgatcttctccttgctgtgggttcgtatcgatccattcac 3447
>dbj|AK061688.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B05, full insert sequence Length = 1582 Score = 474 bits (239), Expect = e-130 Identities = 458/531 (86%) Strand = Plus / Plus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| || ||||| ||||| || ||||||| || ||||| ||||| || |||||||| Sbjct: 582 caactttgcgagtatttggtttatctctctctttctgtcaatctttgctactggtatcct 641 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 ||||||||||||||||||||||||||| || || |||||||||||||| ||||| ||||| Sbjct: 642 tgagatgaggtggagtggtgttggcatcgatgaatggtggaggaatgagcagttttgggt 701 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 ||||||||||| || || ||||| ||||| ||||| |||||||| |||||||||||||| Sbjct: 702 tattggaggtatttccgctcatctatttgcggtcttccagggtctgctgaaggtgcttgc 761 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 || || || |||| ||||||||||||||||||||| ||| ||||||||||| || || Sbjct: 762 tggaattgataccagcttcactgtcacctcaaaggcctctgatgaagaaggcgatttcgc 821 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 |||||||||||||||||||||||| || ||||| ||||| ||||| || || |||||||| Sbjct: 822 tgagctctacatgttcaagtggacaacccttctgatcccaccgaccactattttgatcat 881 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 ||| |||||||||| |||||||||| ||||||||| ||||||||||| ||||| || || Sbjct: 882 caacctggtcggtgttgttgctggtatctcctacgctatcaacagtggctaccagtcatg 941 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| |||||||| |||||||||||||||||||||||||||||||| ||| | |||||||| Sbjct: 942 gggtccgctctttgggaagctcttctttgccttctgggtgattgtccacctgtacccctt 1001 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 ||| |||||||| ||||| |||| ||||| |||||||| ||||| | || ||||| | Sbjct: 1002 ccttaagggtctcatgggtcggcagaaccgtacaccgaccattgttgttgtttgggccat 1061 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcgtgttgatccattcac 640 |||||| || || |||||||||||||||||||||||| | ||||||||||| Sbjct: 1062 cctccttgcatcgatcttctccttgctgtgggttcgtatcgatccattcac 1112
>gb|BT019277.1| Zea mays clone Contig950.F mRNA sequence Length = 789 Score = 448 bits (226), Expect = e-122 Identities = 427/494 (86%) Strand = Plus / Minus Query: 147 tcaatttttgccaccggtatccttgagatgaggtggagtggtgttggcattgacgagtgg 206 ||||| |||||||| |||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 736 tcaatctttgccactggtatccttgagatgaggtggagtggtgttggcattgatgaatgg 677 Query: 207 tggaggaatgaacagttctgggtcattggaggtatctctgcccatctgtttgccgtcttt 266 |||||||| || ||||||||||||||||| ||||| ||||| ||| | ||||||||||| Sbjct: 676 tggaggaacgagcagttctgggtcattggtggtatttctgcgcatttatttgccgtcttc 617 Query: 267 cagggtcttctgaaggtgcttgccggtatcgacaccaacttcactgtcacctcaaaggct 326 |||||||| |||||||||||||| ||||||||||| | ||||||||||||||| ||||| Sbjct: 616 cagggtctcctgaaggtgcttgctggtatcgacacgagcttcactgtcacctctaaggcc 557 Query: 327 aatgacgaagaaggcgactttgctgagctctacatgttcaagtggacgacgcttctcatc 386 | |||||||||||| || ||||| ||||||||||||||||||||||| |||||||| ||| Sbjct: 556 actgacgaagaaggtgattttgccgagctctacatgttcaagtggacaacgcttctgatc 497 Query: 387 cctccgacgaccatcttgatcattaacatggtcggtgtcgttgctggtacctcctacgcc 446 || || || || || |||||||| ||| ||||||| || || ||||| | |||||||| Sbjct: 496 ccaccaaccactattttgatcatcaacctggtcggcgtggtcgctggcatttcctacgca 437 Query: 447 atcaacagtggttaccaatcttgggggccgctcttcgggaagctcttctttgccttctgg 506 ||||| || |||||||| || ||||| || || |||||||||||||||||||| |||||| Sbjct: 436 atcaatagcggttaccagtcatggggacctcttttcgggaagctcttctttgcgttctgg 377 Query: 507 gtgattgttcacttataccccttcctcaagggtcttatgggcaggcaaaaccgcacaccg 566 |||||||| ||| | ||||||||||||||||| || ||||| | ||| |||||||| ||| Sbjct: 376 gtgattgtccacctgtaccccttcctcaagggcctcatggggaagcagaaccgcacgccg 317 Query: 567 acgattgtcatcgtctgggctgtcctcctggcttcaatcttctccttgctgtgggttcgt 626 || |||||| | ||||||||| ||||||| || || ||||| ||| || ||||||||||| Sbjct: 316 accattgtcgttgtctgggctatcctccttgcgtcgatcttttccctgatgtgggttcgt 257 Query: 627 gttgatccattcac 640 | ||||||||||| Sbjct: 256 atcgatccattcac 243
>gb|AF200529.1|AF200529 Zea mays cellulose synthase-5 (CesA-5) mRNA, complete cds Length = 3676 Score = 448 bits (226), Expect = e-122 Identities = 427/494 (86%) Strand = Plus / Plus Query: 147 tcaatttttgccaccggtatccttgagatgaggtggagtggtgttggcattgacgagtgg 206 ||||| |||||||| |||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 2942 tcaatctttgccactggtatccttgagatgaggtggagtggtgttggcattgatgaatgg 3001 Query: 207 tggaggaatgaacagttctgggtcattggaggtatctctgcccatctgtttgccgtcttt 266 |||||||| || ||||||||||||||||| ||||| ||||| ||| | ||||||||||| Sbjct: 3002 tggaggaacgagcagttctgggtcattggtggtatttctgcgcatttatttgccgtcttc 3061 Query: 267 cagggtcttctgaaggtgcttgccggtatcgacaccaacttcactgtcacctcaaaggct 326 |||||||| |||||||||||||| ||||||||||| | ||||||||||||||| ||||| Sbjct: 3062 cagggtctcctgaaggtgcttgctggtatcgacacgagcttcactgtcacctctaaggcc 3121 Query: 327 aatgacgaagaaggcgactttgctgagctctacatgttcaagtggacgacgcttctcatc 386 | |||||||||||| || ||||| ||||||||||||||||||||||| |||||||| ||| Sbjct: 3122 actgacgaagaaggtgattttgccgagctctacatgttcaagtggacaacgcttctgatc 3181 Query: 387 cctccgacgaccatcttgatcattaacatggtcggtgtcgttgctggtacctcctacgcc 446 || || || || || |||||||| ||| ||||||| || || ||||| | |||||||| Sbjct: 3182 ccaccaaccactattttgatcatcaacctggtcggcgtggtcgctggcatttcctacgca 3241 Query: 447 atcaacagtggttaccaatcttgggggccgctcttcgggaagctcttctttgccttctgg 506 ||||| || |||||||| || ||||| || || |||||||||||||||||||| |||||| Sbjct: 3242 atcaatagcggttaccagtcatggggacctcttttcgggaagctcttctttgcgttctgg 3301 Query: 507 gtgattgttcacttataccccttcctcaagggtcttatgggcaggcaaaaccgcacaccg 566 |||||||| ||| | ||||||||||||||||| || ||||| | ||| |||||||| ||| Sbjct: 3302 gtgattgtccacctgtaccccttcctcaagggcctcatggggaagcagaaccgcacgccg 3361 Query: 567 acgattgtcatcgtctgggctgtcctcctggcttcaatcttctccttgctgtgggttcgt 626 || |||||| | ||||||||| ||||||| || || ||||| ||| || ||||||||||| Sbjct: 3362 accattgtcgttgtctgggctatcctccttgcgtcgatcttttccctgatgtgggttcgt 3421 Query: 627 gttgatccattcac 640 | ||||||||||| Sbjct: 3422 atcgatccattcac 3435
>gb|AY483151.1| Hordeum vulgare putative cellulose synthase catalytic subunit (CesA3) mRNA, partial cds Length = 3362 Score = 430 bits (217), Expect = e-117 Identities = 436/509 (85%) Strand = Plus / Plus Query: 117 gccagtatctggttcattgctctcttcctttcaatttttgccaccggtatccttgagatg 176 |||||||| ||||| || ||||||| |||| || |||||||| ||||||||||||||| Sbjct: 2584 gccagtatttggtttatctctctctttatttcgatctttgccactggtatccttgagatg 2643 Query: 177 aggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattgga 236 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 2644 aggtggagcggtgttggcatcgacgagtggtggaggaatgaacagttctgggtcatcgga 2703 Query: 237 ggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggtatc 296 ||||| ||||| ||||||||||| ||||| || ||||| |||||||| ||||| || ||| Sbjct: 2704 ggtatttctgcacatctgtttgctgtcttccaaggtctcctgaaggtacttgctggcatc 2763 Query: 297 gacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgctgagctc 356 ||||||| |||||||||||| ||||| || |||||||| || ||||| |||||| Sbjct: 2764 gacaccagcttcactgtcacttcaaaagcatccgacgaagataatgattttgccgagctc 2823 Query: 357 tacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcattaacatg 416 |||||||||||||||||||| ||||| ||||| || || || ||||||||||| ||| | Sbjct: 2824 tacatgttcaagtggacgactcttctgatcccaccaacaactatcttgatcatcaacctt 2883 Query: 417 gtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttgggggccg 476 |||||||| || ||||||||||||||||| |||||||| || || || || ||||| ||| Sbjct: 2884 gtcggtgttgtggctggtacctcctacgcgatcaacagcggctatcagtcatggggaccg 2943 Query: 477 ctcttcgggaagctcttctttgccttctgggtgattgttcacttataccccttcctcaag 536 || ||||||||||||||||||||||||||||||||| | ||||| ||||| ||||||||| Sbjct: 2944 cttttcgggaagctcttctttgccttctgggtgattatccacttgtacccattcctcaag 3003 Query: 537 ggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgtcctcctg 596 || || ||||| |||| |||||||| ||||| || || |||||||||| |||| || Sbjct: 3004 gggctaatgggacggcagaaccgcacgccgaccatcgttgtcgtctgggccatccttctt 3063 Query: 597 gcttcaatcttctccttgctgtgggttcg 625 || || ||||||||||||||||||||||| Sbjct: 3064 gcatccatcttctccttgctgtgggttcg 3092
>gb|AF200533.1|AF200533 Zea mays cellulose synthase-9 (CesA-9) mRNA, complete cds Length = 3795 Score = 404 bits (204), Expect = e-109 Identities = 438/516 (84%) Strand = Plus / Plus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| || |||||||||||||| |||||||| | || || || ||||| |||||||| Sbjct: 2898 caacttcgctagtatctggttcatctctctcttcatctcgatcttcgccacgggtatcct 2957 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 |||||||||||||| || || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 2958 ggagatgaggtggagcggcgtgggcatcgacgagtggtggaggaacgagcagttctgggt 3017 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 ||| ||||| ||||| ||||| || || |||||||| ||||| || || ||||||||||| Sbjct: 3018 catcggaggcatctccgcccacctcttcgccgtcttccagggcctcctcaaggtgcttgc 3077 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 ||| ||||||||||||||||| |||||||| ||||| || ||||| |||||||| || Sbjct: 3078 cggcatcgacaccaacttcaccgtcacctccaaggcctcggatgaagacggcgacttcgc 3137 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 ||||| |||||||||||||||||||| ||||| ||||| || || |||||| ||||||| Sbjct: 3138 ggagctgtacatgttcaagtggacgacacttctgatcccgcccaccaccatcctgatcat 3197 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 ||| ||||||| || ||||| || | |||||||||||||||||| || ||||| || || Sbjct: 3198 caacctggtcggcgttgttgccggcatctcctacgccatcaacagcgggtaccagtcgtg 3257 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| ||||||||||| ||||||||||| |||||||||||||| |||||| | ||||| || Sbjct: 3258 gggtccgctcttcggcaagctcttcttcgccttctgggtgatcgttcacctgtacccgtt 3317 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 |||||||||||| ||||| |||| |||||||| ||||| || || | |||||||| | Sbjct: 3318 cctcaagggtctcatgggtcggcagaaccgcaccccgaccatcgtggttgtctgggcgat 3377 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcg 625 ||| ||||| || ||||||||||||||||||||||| Sbjct: 3378 cctgctggcgtcgatcttctccttgctgtgggttcg 3413
>gb|AY112236.1| Zea mays CL1160_1 mRNA sequence Length = 3728 Score = 404 bits (204), Expect = e-109 Identities = 438/516 (84%) Strand = Plus / Plus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| || |||||||||||||| |||||||| | || || || ||||| |||||||| Sbjct: 2898 caacttcgctagtatctggttcatctctctcttcatctcgatcttcgccacgggtatcct 2957 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 |||||||||||||| || || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 2958 ggagatgaggtggagcggcgtgggcatcgacgagtggtggaggaacgagcagttctgggt 3017 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 ||| ||||| ||||| ||||| || || |||||||| ||||| || || ||||||||||| Sbjct: 3018 catcggaggcatctccgcccacctcttcgccgtcttccagggcctcctcaaggtgcttgc 3077 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 ||| ||||||||||||||||| |||||||| ||||| || ||||| |||||||| || Sbjct: 3078 cggcatcgacaccaacttcaccgtcacctccaaggcctcggatgaagacggcgacttcgc 3137 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 ||||| |||||||||||||||||||| ||||| ||||| || || |||||| ||||||| Sbjct: 3138 ggagctgtacatgttcaagtggacgacacttctgatcccgcccaccaccatcctgatcat 3197 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 ||| ||||||| || ||||| || | |||||||||||||||||| || ||||| || || Sbjct: 3198 caacctggtcggcgttgttgccggcatctcctacgccatcaacagcgggtaccagtcgtg 3257 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| ||||||||||| ||||||||||| |||||||||||||| |||||| | ||||| || Sbjct: 3258 gggtccgctcttcggcaagctcttcttcgccttctgggtgatcgttcacctgtacccgtt 3317 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 |||||||||||| ||||| |||| |||||||| ||||| || || | |||||||| | Sbjct: 3318 cctcaagggtctcatgggtcggcagaaccgcaccccgaccatcgtggttgtctgggcgat 3377 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcg 625 ||| ||||| || ||||||||||||||||||||||| Sbjct: 3378 cctgctggcgtcgatcttctccttgctgtgggttcg 3413
>gb|AY110079.1| Zea mays CL1164_1 mRNA sequence Length = 3696 Score = 371 bits (187), Expect = 2e-99 Identities = 382/447 (85%) Strand = Plus / Plus Query: 194 cattgacgagtggtggaggaatgaacagttctgggtcattggaggtatctctgcccatct 253 |||||| || ||||||||||| || ||||||||||||||||| ||||| ||||| ||| | Sbjct: 2989 cattgatgaatggtggaggaacgagcagttctgggtcattggtggtatttctgcgcattt 3048 Query: 254 gtttgccgtctttcagggtcttctgaaggtgcttgccggtatcgacaccaacttcactgt 313 ||||||||||| |||||||| |||||||||||||| ||||||||||| | ||||||||| Sbjct: 3049 atttgccgtcttccagggtctcctgaaggtgcttgctggtatcgacacgagcttcactgt 3108 Query: 314 cacctcaaaggctaatgacgaagaaggcgactttgctgagctctacatgttcaagtggac 373 |||||| ||||| | |||||||||||| || ||||| ||||||||||||||||||||||| Sbjct: 3109 cacctctaaggccactgacgaagaaggtgattttgccgagctctacatgttcaagtggac 3168 Query: 374 gacgcttctcatccctccgacgaccatcttgatcattaacatggtcggtgtcgttgctgg 433 |||||||| ||||| || || || || |||||||| ||| ||||||| || || ||||| Sbjct: 3169 aacgcttctgatcccaccaaccactattttgatcatcaacctggtcggcgtggtcgctgg 3228 Query: 434 tacctcctacgccatcaacagtggttaccaatcttgggggccgctcttcgggaagctctt 493 | |||||||| ||||| || |||||||| || ||||| || || |||||||||||||| Sbjct: 3229 catttcctacgcaatcaatagcggttaccagtcatggggacctcttttcgggaagctctt 3288 Query: 494 ctttgccttctgggtgattgttcacttataccccttcctcaagggtcttatgggcaggca 553 |||||| |||||||||||||| ||| | ||||||||||||||||| || ||||| | ||| Sbjct: 3289 ctttgcgttctgggtgattgtccacctgtaccccttcctcaagggcctcatggggaagca 3348 Query: 554 aaaccgcacaccgacgattgtcatcgtctgggctgtcctcctggcttcaatcttctcctt 613 |||||||| ||||| |||||| | ||||||||| ||||||| || || ||||| ||| | Sbjct: 3349 gaaccgcacgccgaccattgtcgttgtctgggctatcctccttgcgtcgatcttttccct 3408 Query: 614 gctgtgggttcgtgttgatccattcac 640 | ||||||||||| | ||||||||||| Sbjct: 3409 gatgtgggttcgtatcgatccattcac 3435
>gb|BT018125.1| Zea mays clone EL01N0554C08.c mRNA sequence Length = 1450 Score = 357 bits (180), Expect = 3e-95 Identities = 432/516 (83%) Strand = Plus / Plus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| || |||||||||||||| |||||||| | || || || ||||| |||||||| Sbjct: 683 caacttcgctagtatctggttcatctctctcttcatctcgatcttcgccacgggtatcct 742 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 |||||||||||||| || || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 743 ggagatgaggtggagcggcgtgggcatcgacgagtggtggaggaacgagcagttctgggt 802 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 ||| ||||| ||||| ||||| || || |||||||| ||||| || || ||||||||||| Sbjct: 803 catcggaggcatctccgcccacctcttcgccgtcttccagggcctcctcaaggtgcttgc 862 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 ||| ||||||||||||||||| |||||||| ||||| || ||||| |||||||| || Sbjct: 863 cggcatcgacaccaacttcaccgtcacctccaaggcctcggatgaagacggcgacttcgc 922 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 ||||| |||||||||||||||||||| ||| | ||||| || || |||||| ||||||| Sbjct: 923 ggagctgtacatgttcaagtggacgacacttttgatcccgcccaccaccatcctgatcat 982 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 ||| ||||||| || ||||| || | |||||||||||||||||| || ||||| || || Sbjct: 983 caacctggtcggcgttgttgccggcatctcctacgccatcaacagcgggtaccagtcgtg 1042 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| ||||| ||||| ||||| || || |||||||||||||| |||| | | ||||| || Sbjct: 1043 gggtccgcttttcggcaagctttttttcgccttctgggtgatcgttcccctgtacccgtt 1102 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 |||||||||||| ||||| |||| |||||||| ||||| || || | || ||||| | Sbjct: 1103 cctcaagggtctcatgggtcggcagaaccgcaccccgaccatcgtggttgtttgggcgat 1162 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcg 625 ||| ||||| || ||||||||||||||||||||||| Sbjct: 1163 cctgctggcgtcgatcttctccttgctgtgggttcg 1198
>gb|AF200528.1|AF200528 Zea mays cellulose synthase-4 (CesA-4) mRNA, complete cds Length = 3745 Score = 357 bits (180), Expect = 3e-95 Identities = 432/516 (83%) Strand = Plus / Plus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| ||||| ||||||||||| | |||||| | || || || ||||| || ||||| Sbjct: 2974 caacttcgccagcatctggttcatctccctcttcatctcgatcttcgccacgggcatcct 3033 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 |||||||||||||| || || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 3034 ggagatgaggtggagcggggtgggcatcgacgagtggtggaggaacgagcagttctgggt 3093 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 || || || ||||| || || || || ||||| || ||||| || || |||||||| || Sbjct: 3094 gatcgggggcatctccgcgcacctcttcgccgtgttccagggcctgctcaaggtgctggc 3153 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 ||| ||||||||||||||||| |||||||| ||||| ||||| || |||||||| || Sbjct: 3154 cggcatcgacaccaacttcaccgtcacctccaaggcctcggacgaggacggcgacttcgc 3213 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 ||||| ||||||||||||||||||||||| || ||||| || || |||||| ||||||| Sbjct: 3214 ggagctgtacatgttcaagtggacgacgctcctgatcccgcccaccaccatcctgatcat 3273 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 ||| ||||||| ||||| || || | |||||||||||||||||| || ||||| || || Sbjct: 3274 caacctggtcggcgtcgtcgccggcatctcctacgccatcaacagcggataccagtcgtg 3333 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| ||||||||||| ||||||||||| ||||||||||| || || ||| | ||||| || Sbjct: 3334 gggcccgctcttcggcaagctcttcttcgccttctgggtcatcgtccacctgtacccgtt 3393 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 ||||||||| || ||||||||||| |||||||| ||||| || ||| |||||||||| | Sbjct: 3394 cctcaagggcctcatgggcaggcagaaccgcaccccgaccatcgtcgtcgtctgggccat 3453 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcg 625 ||| ||||| || ||||||||||||||||||||||| Sbjct: 3454 cctgctggcgtccatcttctccttgctgtgggttcg 3489
>gb|AY108113.1| Zea mays PCO126465 mRNA sequence Length = 3763 Score = 357 bits (180), Expect = 3e-95 Identities = 432/516 (83%) Strand = Plus / Plus Query: 110 caacttggccagtatctggttcattgctctcttcctttcaatttttgccaccggtatcct 169 |||||| ||||| ||||||||||| | |||||| | || || || ||||| || ||||| Sbjct: 2992 caacttcgccagcatctggttcatctccctcttcatctcgatcttcgccacgggcatcct 3051 Query: 170 tgagatgaggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggt 229 |||||||||||||| || || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 3052 ggagatgaggtggagcggggtgggcatcgacgagtggtggaggaacgagcagttctgggt 3111 Query: 230 cattggaggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgc 289 || || || ||||| || || || || ||||| || ||||| || || |||||||| || Sbjct: 3112 gatcgggggcatctccgcgcacctcttcgccgtgttccagggcctgctcaaggtgctggc 3171 Query: 290 cggtatcgacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgc 349 ||| ||||||||||||||||| |||||||| ||||| ||||| || |||||||| || Sbjct: 3172 cggcatcgacaccaacttcaccgtcacctccaaggcctcggacgaggacggcgacttcgc 3231 Query: 350 tgagctctacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcat 409 ||||| ||||||||||||||||||||||| || ||||| || || |||||| ||||||| Sbjct: 3232 ggagctgtacatgttcaagtggacgacgctcctgatcccgcccaccaccatcctgatcat 3291 Query: 410 taacatggtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttg 469 ||| ||||||| ||||| || || | |||||||||||||||||| || ||||| || || Sbjct: 3292 caacctggtcggcgtcgtcgccggcatctcctacgccatcaacagcggataccagtcgtg 3351 Query: 470 ggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccctt 529 ||| ||||||||||| ||||||||||| ||||||||||| || || ||| | ||||| || Sbjct: 3352 gggcccgctcttcggcaagctcttcttcgccttctgggtcatcgtccacctgtacccgtt 3411 Query: 530 cctcaagggtcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgt 589 ||||||||| || ||||||||||| |||||||| ||||| || ||| |||||||||| | Sbjct: 3412 cctcaagggcctcatgggcaggcagaaccgcaccccgaccatcgtcgtcgtctgggccat 3471 Query: 590 cctcctggcttcaatcttctccttgctgtgggttcg 625 ||| ||||| || ||||||||||||||||||||||| Sbjct: 3472 cctgctggcgtccatcttctccttgctgtgggttcg 3507
>gb|AY389728.1| Hyacinthus orientalis cellulose synthase protein mRNA, partial cds Length = 782 Score = 295 bits (149), Expect = 9e-77 Identities = 401/485 (82%) Strand = Plus / Plus Query: 138 ctcttcctttcaatttttgccaccggtatccttgagatgaggtggagtggtgttggcatt 197 ||||| ||||| || |||||||| ||||| || || ||||| ||||| || ||||| || Sbjct: 167 ctctttctttccatctttgccactggtatactggaaatgagatggagcggggttgggatc 226 Query: 198 gacgagtggtggaggaatgaacagttctgggtcattggaggtatctctgcccatctgttt 257 ||||| |||||||||||||||||||| ||||| || ||||| | ||||| ||||||||| Sbjct: 227 gacgaatggtggaggaatgaacagttttgggtgataggaggcgtgtctgcgcatctgttt 286 Query: 258 gccgtctttcagggtcttctgaaggtgcttgccggtatcgacaccaacttcactgtcacc 317 |||||||| |||||||| |||||||| || || || ||||||||||||||||| || ||| Sbjct: 287 gccgtcttccagggtctcctgaaggtcctggcgggcatcgacaccaacttcacagttacc 346 Query: 318 tcaaaggctaatgacgaagaaggcgactttgctgagctctacatgttcaagtggacgacg 377 || ||||| |||||| || || |||||| ||||||| ||||||||||| ||||||||| Sbjct: 347 tcgaaggcctctgacgaggatggtgactttactgagctgtacatgttcaaatggacgacg 406 Query: 378 cttctcatccctccgacgaccatcttgatcattaacatggtcggtgtcgttgctggtacc 437 || || || ||||| |||||| || | || | ||| |||| ||||| || ||||| | | Sbjct: 407 ctcctaattcctcctacgaccctcctcgtcgtcaacctggtgggtgtggtcgctggcatc 466 Query: 438 tcctacgccatcaacagtggttaccaatcttgggggccgctcttcgggaagctcttcttt 497 || ||||| ||||||| || ||||| || ||||| ||||| ||||||||||||||||| Sbjct: 467 tcttacgctgtcaacagcgggtaccagtcgtggggtccgcttttcgggaagctcttcttc 526 Query: 498 gccttctgggtgattgttcacttataccccttcctcaagggtcttatgggcaggcaaaac 557 ||||||||||||||||| ||| | |||||||||||||||| | ||||| ||||| ||| Sbjct: 527 gccttctgggtgattgtccacctctaccccttcctcaaggtcccgatggggaggcagaac 586 Query: 558 cgcacaccgacgattgtcatcgtctgggctgtcctcctggcttcaatcttctccttgctg 617 ||||| ||||| ||||| | |||||| | ||||||||||||| |||||||| ||| || Sbjct: 587 cgcactccgaccattgtggttgtctggtcgatcctcctggcttccatcttctctttgttg 646 Query: 618 tgggt 622 ||||| Sbjct: 647 tgggt 651
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329493 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 329434 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329433 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 329380 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 18 atgcttaacacatgcaagtcgaacg 42 ||||||||||||||||||||||||| Sbjct: 421536 atgcttaacacatgcaagtcgaacg 421512 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 58 agtggcgaacgggtgagtaacgcgt 82 ||||||||||||||| ||||||||| Sbjct: 421381 agtggcgaacgggtgcgtaacgcgt 421357
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89536 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 89477 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89476 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 89423
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123822 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 123763 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123762 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 123709 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91334 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 91393 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91394 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 91447
>gb|AY006582.1| Uncultured rumen bacterium 16S ribosomal RNA gene, partial sequence Length = 318 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 251 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 197
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123822 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 123763 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123762 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 123709 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91334 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 91393 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91394 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 91447
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123771 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 123712 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123711 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 123658 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91279 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 91338 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91339 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 91392
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127549 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 127490 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127489 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 127436 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95188 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 95247 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95248 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 95301
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123792 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 123733 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123732 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 123679 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91326 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 91385 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91386 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 91439
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118379 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 118438 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118439 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 118492 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86504 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 86563 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86564 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 86617 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10101 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 10160 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10161 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 10214 Score = 186 bits (94), Expect = 6e-44 Identities = 110/114 (96%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 59418 ggatgaacgctggcgg-atgcttaacacatgcaagtcgaacgggaagtggtgtttccagg 59360 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 || |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 59359 ggggaacgggtgagtaacgcgtaagaacctggccttgggaggggaacaacaact 59306
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136909 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 136968 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136969 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 137022
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48779 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 48720 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48719 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 48666 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16339 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 16398 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16399 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 16452
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9264259 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 9264318 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9264319 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 9264372 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9223759 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 9223818 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9223819 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 9223872 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9205431 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 9205490 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9205491 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 9205544 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9160353 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 9160412 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9160413 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 9160466 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9128478 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 9128537 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9128538 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 9128591 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9052175 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 9052234 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9052235 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 9052288 Score = 186 bits (94), Expect = 6e-44 Identities = 110/114 (96%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9101392 ggatgaacgctggcgg-atgcttaacacatgcaagtcgaacgggaagtggtgtttccagg 9101334 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 || |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9101333 ggggaacgggtgagtaacgcgtaagaacctggccttgggaggggaacaacaact 9101280 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 18 atgcttaacacatgcaagtcgaacg 42 ||||||||||||||||||||||||| Sbjct: 32962123 atgcttaacacatgcaagtcgaacg 32962099 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 58 agtggcgaacgggtgagtaacgcgt 82 ||||||||||||||| ||||||||| Sbjct: 32961961 agtggcgaacgggtgcgtaacgcgt 32961937
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19934246 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 19934305 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19934306 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 19934359 Score = 222 bits (112), Expect = 1e-54 Identities = 112/112 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10383125 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 10383184 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaa 112 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10383185 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaa 10383236 Score = 218 bits (110), Expect = 2e-53 Identities = 113/114 (99%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10281177 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacggcaagtggtgtttccagt 10281118 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281117 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 10281064 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 468 tgggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccc 527 ||||| ||||| ||||||||||||||||| |||||||||| || | ||| | |||||| Sbjct: 16751174 tggggcccgctgttcgggaagctcttcttctccttctgggtcatcctccacctctacccc 16751233 Query: 528 ttcctcaagggtcttatgggcaggcaaaaccg 559 ||||||||||| || ||||| ||||| ||||| Sbjct: 16751234 ttcctcaaggggctcatggggaggcagaaccg 16751265 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 351 gagctctacatgttcaagtggacgacgct 379 ||||||||| ||||||||||||||||||| Sbjct: 16751057 gagctctacctgttcaagtggacgacgct 16751085
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9245736 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 9245677 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9245676 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 9245623
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 885112 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 885053 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 885052 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 884999 Score = 206 bits (104), Expect = 7e-50 Identities = 361/444 (81%), Gaps = 2/444 (0%) Strand = Plus / Minus Query: 180 tggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattggaggt 239 |||||||||||||| || || || |||||||| ||||||||||||||||||||||| || Sbjct: 4507179 tggagtggtgttggtatcgaggactggtggagaaatgaacagttctgggtcattggtggc 4507120 Query: 240 atctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggtatcgac 299 | ||||||||||| || || || || |||||||||||||| ||| | || || || || Sbjct: 4507119 acatctgcccatctcttcgctgtgttccagggtcttctgaaagtgttagcaggaattgat 4507060 Query: 300 accaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgctgagctctac 359 |||||||||||||| ||||||||||| || || || || |||||||||||||| ||| Sbjct: 4507059 accaacttcactgttacctcaaaggcgtccgatgaggatggtgactttgctgagctatac 4507000 Query: 360 atgttcaagtggacgacgcttctcatccctccgacgaccat-cttgatcattaacatggt 418 ||||||||||||| | || ||||| || ||||| ||| | |||| |||| ||| |||| Sbjct: 4506999 gtgttcaagtggaccagtctcctcattcccccgaccaccgtgcttg-tcatcaacctggt 4506941 Query: 419 cggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttgggggccgct 478 || | || || |||| || || ||||| ||||| ||||||||||| ||||| || || Sbjct: 4506940 gggcatggtggcgggtatatcatatgccattaacagcggttaccaatcatggggtcctct 4506881 Query: 479 cttcgggaagctcttctttgccttctgggtgattgttcacttataccccttcctcaaggg 538 ||| || ||||||||||| || |||||||||| | || | ||||||||||||||||| Sbjct: 4506880 ctttggaaagctcttcttctccatctgggtgatcctccatctctaccccttcctcaaggg 4506821 Query: 539 tcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgtcctcctggc 598 ||| ||||||||||| |||||||| ||||| || |||||||||||| | ||||||| || Sbjct: 4506820 tctcatgggcaggcagaaccgcactccgaccatcgtcatcgtctggtcgatcctcctcgc 4506761 Query: 599 ttcaatcttctccttgctgtgggt 622 || ||||||||| | |||||||| Sbjct: 4506760 gtcgatcttctcccttctgtgggt 4506737 Score = 172 bits (87), Expect = 9e-40 Identities = 87/87 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12841310 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 12841251 Query: 61 ggcgaacgggtgagtaacgcgtaagaa 87 ||||||||||||||||||||||||||| Sbjct: 12841250 ggcgaacgggtgagtaacgcgtaagaa 12841224 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 83 aagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||| Sbjct: 12829817 aagaacctgcccttgggaggggaacaacaact 12829786
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51797 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 51738 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51737 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 51684
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127618 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 127559 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127558 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 127505 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95219 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 95278 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95279 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 95332
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56949 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 56890 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56889 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 56836
>gb|AF176637.1|AF176637 Plastid transformation vector pMSK49 plastid targeting region Length = 5270 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1305 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 1246 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1245 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 1192
>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0067K15 Length = 160162 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65319 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 65260 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65259 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 65206
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1541 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 1600 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1601 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 1654
>dbj|AK059819.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-C07, full insert sequence Length = 1003 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 86 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 140
>gb|AY108281.1| Zea mays PCO132843 mRNA sequence Length = 982 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 76 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 130
>emb|AJ239003.1|TAE239003 Triticum aestivum (L.) partial chloroplast 16S rRNA gene Length = 1482 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 78 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 132
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19945522 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 19945581 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19945582 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 19945635 Score = 222 bits (112), Expect = 1e-54 Identities = 112/112 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10389164 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 10389223 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaa 112 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10389224 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaa 10389275 Score = 218 bits (110), Expect = 2e-53 Identities = 113/114 (99%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10287216 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacggcaagtggtgtttccagt 10287157 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10287156 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 10287103 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 468 tgggggccgctcttcgggaagctcttctttgccttctgggtgattgttcacttatacccc 527 ||||| ||||| ||||||||||||||||| |||||||||| || | ||| | |||||| Sbjct: 16760214 tggggcccgctgttcgggaagctcttcttctccttctgggtcatcctccacctctacccc 16760273 Query: 528 ttcctcaagggtcttatgggcaggcaaaaccg 559 ||||||||||| || ||||| ||||| ||||| Sbjct: 16760274 ttcctcaaggggctcatggggaggcagaaccg 16760305 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 351 gagctctacatgttcaagtggacgacgct 379 ||||||||| ||||||||||||||||||| Sbjct: 16760097 gagctctacctgttcaagtggacgacgct 16760125
>emb|AJ555400.1|TTU555400 Triticum turgidum subsp. dicoccum partial chloroplast 16S rRNA gene Length = 1483 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 79 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 133
>emb|AJ555402.1|ATA555402 Aegilops tauschii partial chloroplast 16S rRNA gene Length = 1483 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 79 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 133
>emb|AJ555401.1|ASP555401 Aegilops speltoides partial chloroplast 16S rRNA gene Length = 1483 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 79 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 133
>emb|AM159495.1| Uncultured bacterium 16S rRNA gene, clone RB90b-49 Length = 1008 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 84 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 138
>emb|AM159434.1| Uncultured bacterium 16S rRNA gene, clone RB45-28 Length = 995 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 75 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 129
>emb|AM159431.1| Uncultured bacterium 16S rRNA gene, clone RB45-25e Length = 984 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 75 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 129
>emb|AM159428.1| Uncultured bacterium 16S rRNA gene, clone RB45-22e Length = 997 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 75 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 129
>emb|AM159406.1| Uncultured bacterium 16S rRNA gene, clone RB45-47 Length = 972 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 75 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 129
>emb|AM159403.1| Uncultured bacterium 16S rRNA gene, clone RB45-20 Length = 993 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 70 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 124
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128335 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 128276 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128275 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 128222 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95896 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 95955 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95956 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 96009
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123765 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 123706 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123705 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 123652 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91274 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 91333 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91334 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 91387
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123815 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 123756 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123755 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 123702 Score = 226 bits (114), Expect = 7e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91079 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 91138 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91139 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 91192
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 222 bits (112), Expect = 1e-54 Identities = 112/112 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89517 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 89576 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaa 112 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89577 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaa 89628
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 222 bits (112), Expect = 1e-54 Identities = 112/112 (100%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23581 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 23640 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaa 112 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23641 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaa 23692
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 218 bits (110), Expect = 2e-53 Identities = 113/114 (99%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 62502 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacggcaagtggtgtttccagt 62443 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62442 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 62389
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 218 bits (110), Expect = 2e-53 Identities = 113/114 (99%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14345519 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 14345578 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 14345579 ggcgaacgggtgagtaacgcgtaagaacttgcccttgggaggggaacaacaact 14345632 Score = 194 bits (98), Expect = 3e-46 Identities = 110/114 (96%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 812200 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacaggaagtggtgtttctagt 812141 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 812140 ggcgaatgggtgagtaacgcgtaagaacctgcctttgggaggggaacaacaact 812087
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0022A24 Length = 148347 Score = 218 bits (110), Expect = 2e-53 Identities = 113/114 (99%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67441 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 67500 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 67501 ggcgaacgggtgagtaacgcgtaagaacttgcccttgggaggggaacaacaact 67554
>emb|AM159498.1| Uncultured bacterium 16S rRNA gene, clone RB90b-72 Length = 997 Score = 218 bits (110), Expect = 2e-53 Identities = 113/114 (99%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 73 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 74 ggcgaacgggtgagtaacgcgtaagaacctgccctggggaggggaacaacaact 127
>gb|DQ124221.1| Fagus sylvatica putative cellulose synthase mRNA, partial cds Length = 825 Score = 216 bits (109), Expect = 7e-53 Identities = 310/377 (82%) Strand = Plus / Plus Query: 138 ctcttcctttcaatttttgccaccggtatccttgagatgaggtggagtggtgttggcatt 197 ||||| ||||| || ||||| ||||||||||| ||||||||||||||||||||||| ||| Sbjct: 416 ctctttctttccatctttgctaccggtatcctagagatgaggtggagtggtgttggaatt 475 Query: 198 gacgagtggtggaggaatgaacagttctgggtcattggaggtatctctgcccatctgttt 257 |||||||||||||| ||||| ||||| ||||| ||||| ||| | || |||||||| ||| Sbjct: 476 gacgagtggtggagaaatgagcagttttgggttattggtggtgtttcagcccatctcttt 535 Query: 258 gccgtctttcagggtcttctgaaggtgcttgccggtatcgacaccaacttcactgtcacc 317 ||||| || || ||| | || || || ||||| |||||||||||||||||||| ||||| Sbjct: 536 gccgttttccaaggtttgcttaaagtacttgctggtatcgacaccaacttcacggtcaca 595 Query: 318 tcaaaggctaatgacgaagaaggcgactttgctgagctctacatgttcaagtggacgacg 377 || ||||| || ||||| || |||| |||||| | ||| |||| || ||||| || Sbjct: 596 tccaaggcatcagatgaagatggagactctgctgaattgtacttgtttaaatggacaacc 655 Query: 378 cttctcatccctccgacgaccatcttgatcattaacatggtcggtgtcgttgctggtacc 437 ||||||||||| || || || || | || || ||| |||| || |||||||| || | Sbjct: 656 cttctcatcccaccaacaactctccttattataaacttggttggagtcgttgcagggatt 715 Query: 438 tcctacgccatcaacagtggttaccaatcttgggggccgctcttcgggaagctcttcttt 497 ||||||||||| ||||| ||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 716 tcctacgccataaacagcggttaccaatcatggggtcctctctttgggaagctcttcttc 775 Query: 498 gccttctgggtgattgt 514 ||||| ||||||||||| Sbjct: 776 gccttttgggtgattgt 792
>gb|AF445656.1| Uncultured eukaryote clone SM1B08 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 1475 Score = 212 bits (107), Expect = 1e-51 Identities = 110/111 (99%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 78 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 79 ggcgaacgggtgagtaatgcgtaagaacctgcccttgggaggggaacaaca 129
>gb|DQ419755.1| Uncultured bacterium clone biogas-LD-B97 16S ribosomal RNA gene, partial sequence Length = 496 Score = 212 bits (107), Expect = 1e-51 Identities = 110/111 (99%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 78 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 79 ggcgaacgggtgagtaatgcgtaagaacctgcccttgggaggggaacaaca 129
>dbj|AB161082.1| Uncultured cyanobacterium gene for 16S ribosomal RNA, partial sequence, clone:2EX Length = 494 Score = 212 bits (107), Expect = 1e-51 Identities = 110/111 (99%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 79 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 80 ggcgaacgggtgagtaatgcgtaagaacctgcccttgggaggggaacaaca 130
>emb|AM159480.1| Uncultured bacterium 16S rRNA gene, clone RB90b-43 Length = 1095 Score = 212 bits (107), Expect = 1e-51 Identities = 114/115 (99%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 1 ggatgaacg-ctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccag 59 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 ggatgaacggctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccag 181 Query: 60 tggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 tggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 236 Score = 170 bits (86), Expect = 4e-39 Identities = 93/94 (98%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 1 ggatgaacg-ctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccag 59 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25 ggatgaacggctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccag 84 Query: 60 tggcgaacgggtgagtaacgcgtaagaacctgcc 93 |||||||||||||||||||||||||||||||||| Sbjct: 85 tggcgaacgggtgagtaacgcgtaagaacctgcc 118
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 210 bits (106), Expect = 4e-51 Identities = 112/114 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 146016 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 145957 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145956 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 145903 Score = 210 bits (106), Expect = 4e-51 Identities = 112/114 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 107641 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 107700 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107701 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 107754
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 210 bits (106), Expect = 4e-51 Identities = 112/114 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 138853 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 138794 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138793 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 138740 Score = 210 bits (106), Expect = 4e-51 Identities = 112/114 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 101429 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 101488 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101489 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 101542
>gb|AF244557.1|AF244557 Magnolia x soulangeana 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1456 Score = 210 bits (106), Expect = 4e-51 Identities = 112/114 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 64 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 118
>gb|AY212283.1| Dendrobium hybrid cultivar isolate ps124 tRNA-Val and 16S ribosomal RNA, partial sequence; chloroplast genes for chloroplast products Length = 468 Score = 210 bits (106), Expect = 4e-51 Identities = 112/114 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 290 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 349 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 403
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 210 bits (106), Expect = 4e-51 Identities = 112/114 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 131727 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 131668 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131667 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 131614 Score = 210 bits (106), Expect = 4e-51 Identities = 112/114 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 103195 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 103254 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103255 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 103308
>emb|AM159430.1| Uncultured bacterium 16S rRNA gene, clone RB45-24e Length = 991 Score = 210 bits (106), Expect = 4e-51 Identities = 112/114 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 16 ggatgaacgctggcggcatgcttaacaactgcaagtcgaacgggaagtggtgtttccagt 75 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 129
>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08, complete sequence Length = 144781 Score = 206 bits (104), Expect = 7e-50 Identities = 361/444 (81%), Gaps = 2/444 (0%) Strand = Plus / Minus Query: 180 tggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattggaggt 239 |||||||||||||| || || || |||||||| ||||||||||||||||||||||| || Sbjct: 128803 tggagtggtgttggtatcgaggactggtggagaaatgaacagttctgggtcattggtggc 128744 Query: 240 atctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggtatcgac 299 | ||||||||||| || || || || |||||||||||||| ||| | || || || || Sbjct: 128743 acatctgcccatctcttcgctgtgttccagggtcttctgaaagtgttagcaggaattgat 128684 Query: 300 accaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgctgagctctac 359 |||||||||||||| ||||||||||| || || || || |||||||||||||| ||| Sbjct: 128683 accaacttcactgttacctcaaaggcgtccgatgaggatggtgactttgctgagctatac 128624 Query: 360 atgttcaagtggacgacgcttctcatccctccgacgaccat-cttgatcattaacatggt 418 ||||||||||||| | || ||||| || ||||| ||| | |||| |||| ||| |||| Sbjct: 128623 gtgttcaagtggaccagtctcctcattcccccgaccaccgtgcttg-tcatcaacctggt 128565 Query: 419 cggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttgggggccgct 478 || | || || |||| || || ||||| ||||| ||||||||||| ||||| || || Sbjct: 128564 gggcatggtggcgggtatatcatatgccattaacagcggttaccaatcatggggtcctct 128505 Query: 479 cttcgggaagctcttctttgccttctgggtgattgttcacttataccccttcctcaaggg 538 ||| || ||||||||||| || |||||||||| | || | ||||||||||||||||| Sbjct: 128504 ctttggaaagctcttcttctccatctgggtgatcctccatctctaccccttcctcaaggg 128445 Query: 539 tcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgtcctcctggc 598 ||| ||||||||||| |||||||| ||||| || |||||||||||| | ||||||| || Sbjct: 128444 tctcatgggcaggcagaaccgcactccgaccatcgtcatcgtctggtcgatcctcctcgc 128385 Query: 599 ttcaatcttctccttgctgtgggt 622 || ||||||||| | |||||||| Sbjct: 128384 gtcgatcttctcccttctgtgggt 128361
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 206 bits (104), Expect = 7e-50 Identities = 361/444 (81%), Gaps = 2/444 (0%) Strand = Plus / Minus Query: 180 tggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattggaggt 239 |||||||||||||| || || || |||||||| ||||||||||||||||||||||| || Sbjct: 17646 tggagtggtgttggtatcgaggactggtggagaaatgaacagttctgggtcattggtggc 17587 Query: 240 atctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggtatcgac 299 | ||||||||||| || || || || |||||||||||||| ||| | || || || || Sbjct: 17586 acatctgcccatctcttcgctgtgttccagggtcttctgaaagtgttagcaggaattgat 17527 Query: 300 accaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgctgagctctac 359 |||||||||||||| ||||||||||| || || || || |||||||||||||| ||| Sbjct: 17526 accaacttcactgttacctcaaaggcgtccgatgaggatggtgactttgctgagctatac 17467 Query: 360 atgttcaagtggacgacgcttctcatccctccgacgaccat-cttgatcattaacatggt 418 ||||||||||||| | || ||||| || ||||| ||| | |||| |||| ||| |||| Sbjct: 17466 gtgttcaagtggaccagtctcctcattcccccgaccaccgtgcttg-tcatcaacctggt 17408 Query: 419 cggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttgggggccgct 478 || | || || |||| || || ||||| ||||| ||||||||||| ||||| || || Sbjct: 17407 gggcatggtggcgggtatatcatatgccattaacagcggttaccaatcatggggtcctct 17348 Query: 479 cttcgggaagctcttctttgccttctgggtgattgttcacttataccccttcctcaaggg 538 ||| || ||||||||||| || |||||||||| | || | ||||||||||||||||| Sbjct: 17347 ctttggaaagctcttcttctccatctgggtgatcctccatctctaccccttcctcaaggg 17288 Query: 539 tcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgtcctcctggc 598 ||| ||||||||||| |||||||| ||||| || |||||||||||| | ||||||| || Sbjct: 17287 tctcatgggcaggcagaaccgcactccgaccatcgtcatcgtctggtcgatcctcctcgc 17228 Query: 599 ttcaatcttctccttgctgtgggt 622 || ||||||||| | |||||||| Sbjct: 17227 gtcgatcttctcccttctgtgggt 17204
>dbj|AK102140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085K01, full insert sequence Length = 3768 Score = 206 bits (104), Expect = 7e-50 Identities = 361/444 (81%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 180 tggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattggaggt 239 |||||||||||||| || || || |||||||| ||||||||||||||||||||||| || Sbjct: 2905 tggagtggtgttggtatcgaggactggtggagaaatgaacagttctgggtcattggtggc 2964 Query: 240 atctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggtatcgac 299 | ||||||||||| || || || || |||||||||||||| ||| | || || || || Sbjct: 2965 acatctgcccatctcttcgctgtgttccagggtcttctgaaagtgttagcaggaattgat 3024 Query: 300 accaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgctgagctctac 359 |||||||||||||| ||||||||||| || || || || |||||||||||||| ||| Sbjct: 3025 accaacttcactgttacctcaaaggcgtccgatgaggatggtgactttgctgagctatac 3084 Query: 360 atgttcaagtggacgacgcttctcatccctccgacgaccat-cttgatcattaacatggt 418 ||||||||||||| | || ||||| || ||||| ||| | |||| |||| ||| |||| Sbjct: 3085 gtgttcaagtggaccagtctcctcattcccccgaccaccgtgcttg-tcatcaacctggt 3143 Query: 419 cggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttgggggccgct 478 || | || || |||| || || ||||| ||||| ||||||||||| ||||| || || Sbjct: 3144 gggcatggtggcgggtatatcatatgccattaacagcggttaccaatcatggggtcctct 3203 Query: 479 cttcgggaagctcttctttgccttctgggtgattgttcacttataccccttcctcaaggg 538 ||| || ||||||||||| || |||||||||| | || | ||||||||||||||||| Sbjct: 3204 ctttggaaagctcttcttctccatctgggtgatcctccatctctaccccttcctcaaggg 3263 Query: 539 tcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgtcctcctggc 598 ||| ||||||||||| |||||||| ||||| || |||||||||||| | ||||||| || Sbjct: 3264 tctcatgggcaggcagaaccgcactccgaccatcgtcatcgtctggtcgatcctcctcgc 3323 Query: 599 ttcaatcttctccttgctgtgggt 622 || ||||||||| | |||||||| Sbjct: 3324 gtcgatcttctcccttctgtgggt 3347
>dbj|AK100188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034D20, full insert sequence Length = 3897 Score = 206 bits (104), Expect = 7e-50 Identities = 361/444 (81%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 180 tggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattggaggt 239 |||||||||||||| || || || |||||||| ||||||||||||||||||||||| || Sbjct: 2905 tggagtggtgttggtatcgaggactggtggagaaatgaacagttctgggtcattggtggc 2964 Query: 240 atctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggtatcgac 299 | ||||||||||| || || || || |||||||||||||| ||| | || || || || Sbjct: 2965 acatctgcccatctcttcgctgtgttccagggtcttctgaaagtgttagcaggaattgat 3024 Query: 300 accaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgctgagctctac 359 |||||||||||||| ||||||||||| || || || || |||||||||||||| ||| Sbjct: 3025 accaacttcactgttacctcaaaggcgtccgatgaggatggtgactttgctgagctatac 3084 Query: 360 atgttcaagtggacgacgcttctcatccctccgacgaccat-cttgatcattaacatggt 418 ||||||||||||| | || ||||| || ||||| ||| | |||| |||| ||| |||| Sbjct: 3085 gtgttcaagtggaccagtctcctcattcccccgaccaccgtgcttg-tcatcaacctggt 3143 Query: 419 cggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttgggggccgct 478 || | || || |||| || || ||||| ||||| ||||||||||| ||||| || || Sbjct: 3144 gggcatggtggcgggtatatcatatgccattaacagcggttaccaatcatggggtcctct 3203 Query: 479 cttcgggaagctcttctttgccttctgggtgattgttcacttataccccttcctcaaggg 538 ||| || ||||||||||| || |||||||||| | || | ||||||||||||||||| Sbjct: 3204 ctttggaaagctcttcttctccatctgggtgatcctccatctctaccccttcctcaaggg 3263 Query: 539 tcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgtcctcctggc 598 ||| ||||||||||| |||||||| ||||| || |||||||||||| | ||||||| || Sbjct: 3264 tctcatgggcaggcagaaccgcactccgaccatcgtcatcgtctggtcgatcctcctcgc 3323 Query: 599 ttcaatcttctccttgctgtgggt 622 || ||||||||| | |||||||| Sbjct: 3324 gtcgatcttctcccttctgtgggt 3347
>dbj|AK099281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125F05, full insert sequence Length = 3801 Score = 206 bits (104), Expect = 7e-50 Identities = 361/444 (81%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 180 tggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattggaggt 239 |||||||||||||| || || || |||||||| ||||||||||||||||||||||| || Sbjct: 2905 tggagtggtgttggtatcgaggactggtggagaaatgaacagttctgggtcattggtggc 2964 Query: 240 atctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggtatcgac 299 | ||||||||||| || || || || |||||||||||||| ||| | || || || || Sbjct: 2965 acatctgcccatctcttcgctgtgttccagggtcttctgaaagtgttagcaggaattgat 3024 Query: 300 accaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgctgagctctac 359 |||||||||||||| ||||||||||| || || || || |||||||||||||| ||| Sbjct: 3025 accaacttcactgttacctcaaaggcgcccgatgaggatggtgactttgctgagctatac 3084 Query: 360 atgttcaagtggacgacgcttctcatccctccgacgaccat-cttgatcattaacatggt 418 ||||||||||||| | || ||||| || ||||| ||| | |||| |||| ||| |||| Sbjct: 3085 gtgttcaagtggaccagtctcctcattcccccgaccaccgtgcttg-tcatcaacctggt 3143 Query: 419 cggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttgggggccgct 478 || | || || |||| || || ||||| ||||| ||||||||||| ||||| || || Sbjct: 3144 gggcatggtggcgggtatatcatatgccattaacagcggttaccaatcatggggtcctct 3203 Query: 479 cttcgggaagctcttctttgccttctgggtgattgttcacttataccccttcctcaaggg 538 ||| || ||||||||||| || |||||||||| | || | ||||||||||||||||| Sbjct: 3204 ctttggaaagctcttcttctccatctgggtgatcctccatctctaccccttcctcaaggg 3263 Query: 539 tcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgtcctcctggc 598 ||| ||||||||||| |||||||| ||||| || |||||||||||| | ||||||| || Sbjct: 3264 tctcatgggcaggcagaaccgcactccgaccatcgtcatcgtctggtcgatcctcctcgc 3323 Query: 599 ttcaatcttctccttgctgtgggt 622 || ||||||||| | |||||||| Sbjct: 3324 gtcgatcttctcccttctgtgggt 3347
>dbj|AK099228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091P03, full insert sequence Length = 3732 Score = 206 bits (104), Expect = 7e-50 Identities = 361/444 (81%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 180 tggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattggaggt 239 |||||||||||||| || || || |||||||| ||||||||||||||||||||||| || Sbjct: 2905 tggagtggtgttggtatcgaggactggtggagaaatgaacagttctgggtcattggtggc 2964 Query: 240 atctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggtatcgac 299 | ||||||||||| || || || || |||||||||||||| ||| | || || || || Sbjct: 2965 acatctgcccatctcttcgctgtgttccagggtcttctgaaagtgttagcaggaattgat 3024 Query: 300 accaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgctgagctctac 359 |||||||||||||| ||||||||||| || || || || |||||||||||||| ||| Sbjct: 3025 accaacttcactgttacctcaaaggcgtccgatgaggatggtgactttgctgagctatac 3084 Query: 360 atgttcaagtggacgacgcttctcatccctccgacgaccat-cttgatcattaacatggt 418 ||||||||||||| | || ||||| || ||||| ||| | |||| |||| ||| |||| Sbjct: 3085 gtgttcaagtggaccagtctcctcattcccccgaccaccgtgcttg-tcatcaacctggt 3143 Query: 419 cggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttgggggccgct 478 || | || || |||| || || ||||| ||||| ||||||||||| ||||| || || Sbjct: 3144 gggcatggtggcgggtatatcatatgccattaacagcggttaccaatcatggggtcctct 3203 Query: 479 cttcgggaagctcttctttgccttctgggtgattgttcacttataccccttcctcaaggg 538 ||| || ||||||||||| || |||||||||| | || | ||||||||||||||||| Sbjct: 3204 ctttggaaagctcttcttctccatctgggtgatcctccatctctaccccttcctcaaggg 3263 Query: 539 tcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgtcctcctggc 598 ||| ||||||||||| |||||||| ||||| || |||||||||||| | ||||||| || Sbjct: 3264 tctcatgggcaggcagaaccgcactccgaccatcgtcatcgtctggtcgatcctcctcgc 3323 Query: 599 ttcaatcttctccttgctgtgggt 622 || ||||||||| | |||||||| Sbjct: 3324 gtcgatcttctcccttctgtgggt 3347
>dbj|AK098978.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092B06, full insert sequence Length = 3764 Score = 206 bits (104), Expect = 7e-50 Identities = 361/444 (81%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 180 tggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattggaggt 239 |||||||||||||| || || || |||||||| ||||||||||||||||||||||| || Sbjct: 2905 tggagtggtgttggtatcgaggactggtggagaaatgaacagttctgggtcattggtggc 2964 Query: 240 atctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggtatcgac 299 | ||||||||||| || || || || |||||||||||||| ||| | || || || || Sbjct: 2965 acatctgcccatctcttcgctgtgttccagggtcttctgaaagtgttagcaggaattgat 3024 Query: 300 accaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgctgagctctac 359 |||||||||||||| ||||||||||| || || || || |||||||||||||| ||| Sbjct: 3025 accaacttcactgttacctcaaaggcgtccgatgaggatggtgactttgctgagctatac 3084 Query: 360 atgttcaagtggacgacgcttctcatccctccgacgaccat-cttgatcattaacatggt 418 ||||||||||||| | || ||||| || ||||| ||| | |||| |||| ||| |||| Sbjct: 3085 gtgttcaagtggaccagtctcctcattcccccgaccaccgtgcttg-tcatcaacctggt 3143 Query: 419 cggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttgggggccgct 478 || | || || |||| || || ||||| ||||| ||||||||||| ||||| || || Sbjct: 3144 gggcatggtggcgggtatatcatatgccattaacagcggttaccaatcatggggtcctct 3203 Query: 479 cttcgggaagctcttctttgccttctgggtgattgttcacttataccccttcctcaaggg 538 ||| || ||||||||||| || |||||||||| | || | ||||||||||||||||| Sbjct: 3204 ctttggaaagctcttcttctccatctgggtgatcctccatctctaccccttcctcaaggg 3263 Query: 539 tcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgtcctcctggc 598 ||| ||||||||||| |||||||| ||||| || |||||||||||| | ||||||| || Sbjct: 3264 tctcatgggcaggcagaaccgcactccgaccatcgtcatcgtctggtcgatcctcctcgc 3323 Query: 599 ttcaatcttctccttgctgtgggt 622 || ||||||||| | |||||||| Sbjct: 3324 gtcgatcttctcccttctgtgggt 3347
>dbj|AK067967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013125H24, full insert sequence Length = 3802 Score = 206 bits (104), Expect = 7e-50 Identities = 361/444 (81%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 180 tggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattggaggt 239 |||||||||||||| || || || |||||||| ||||||||||||||||||||||| || Sbjct: 2905 tggagtggtgttggtatcgaggactggtggagaaatgaacagttctgggtcattggtggc 2964 Query: 240 atctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggtatcgac 299 | ||||||||||| || || || || |||||||||||||| ||| | || || || || Sbjct: 2965 acatctgcccatctcttcgctgtgttccagggtcttctgaaagtgttagcaggaattgat 3024 Query: 300 accaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgctgagctctac 359 |||||||||||||| ||||||||||| || || || || |||||||||||||| ||| Sbjct: 3025 accaacttcactgttacctcaaaggcgtccgatgaggatggtgactttgctgagctatac 3084 Query: 360 atgttcaagtggacgacgcttctcatccctccgacgaccat-cttgatcattaacatggt 418 ||||||||||||| | || ||||| || ||||| ||| | |||| |||| ||| |||| Sbjct: 3085 gtgttcaagtggaccagtctcctcattcccccgaccaccgtgcttg-tcatcaacctggt 3143 Query: 419 cggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttgggggccgct 478 || | || || |||| || || ||||| ||||| ||||||||||| ||||| || || Sbjct: 3144 gggcatggtggcgggtatatcatatgccattaacagcggttaccaatcatggggtcctct 3203 Query: 479 cttcgggaagctcttctttgccttctgggtgattgttcacttataccccttcctcaaggg 538 ||| || ||||||||||| || |||||||||| | || | ||||||||||||||||| Sbjct: 3204 ctttggaaagctcttcttctccatctgggtgatcctccatctctaccccttcctcaaggg 3263 Query: 539 tcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgtcctcctggc 598 ||| ||||||||||| |||||||| ||||| || |||||||||||| | ||||||| || Sbjct: 3264 tctcatgggcaggcagaaccgcactccgaccatcgtcatcgtctggtcgatcctcctcgc 3323 Query: 599 ttcaatcttctccttgctgtgggt 622 || ||||||||| | |||||||| Sbjct: 3324 gtcgatcttctcccttctgtgggt 3347
>dbj|AK060079.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-C08, full insert sequence Length = 1097 Score = 206 bits (104), Expect = 7e-50 Identities = 361/444 (81%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 180 tggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattggaggt 239 |||||||||||||| || || || |||||||| ||||||||||||||||||||||| || Sbjct: 156 tggagtggtgttggtatcgaggactggtggagaaatgaacagttctgggtcattggtggc 215 Query: 240 atctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggtatcgac 299 | ||||||||||| || || || || |||||||||||||| ||| | || || || || Sbjct: 216 acatctgcccatctcttcgctgtgttccagggtcttctgaaagtgttagcaggaattgat 275 Query: 300 accaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgctgagctctac 359 |||||||||||||| ||||||||||| || || || || |||||||||||||| ||| Sbjct: 276 accaacttcactgttacctcaaaggcgtccgatgaggatggtgactttgctgagctatac 335 Query: 360 atgttcaagtggacgacgcttctcatccctccgacgaccat-cttgatcattaacatggt 418 ||||||||||||| | || ||||| || ||||| ||| | |||| |||| ||| |||| Sbjct: 336 gtgttcaagtggaccagtctcctcattcccccgaccaccgtgcttg-tcatcaacctggt 394 Query: 419 cggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttgggggccgct 478 || | || || |||| || || ||||| ||||| ||||||||||| ||||| || || Sbjct: 395 gggcatggtggcgggtatatcatatgccattaacagcggttaccaatcatggggtcctct 454 Query: 479 cttcgggaagctcttctttgccttctgggtgattgttcacttataccccttcctcaaggg 538 ||| || ||||||||||| || |||||||||| | || | ||||||||||||||||| Sbjct: 455 ctttggaaagctcttcttctccatctgggtgatcctccatctctaccccttcctcaaggg 514 Query: 539 tcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgtcctcctggc 598 ||| ||||||||||| |||||||| ||||| || |||||||||||| | ||||||| || Sbjct: 515 tctcatgggcaggcagaaccgcactccgaccatcgtcatcgtctggtcgatcctcctcgc 574 Query: 599 ttcaatcttctccttgctgtgggt 622 || ||||||||| | |||||||| Sbjct: 575 gtcgatcttctcccttctgtgggt 598
>gb|DQ013044.1| Lactuca sativa NADH dehydrogenase subunit 2 (ndhB) gene, partial cds; ribosomal protein S7 (rps7) gene, complete cds; ribosomal protein S12 (rps12) gene, partial cds; tRNA-Val, 16S ribosomal RNA, tRNA-Ile, and tRNA-Ala genes, complete sequence; 23S ribosomal RNA gene, partial sequence; and unknown gene; chloroplast Length = 8165 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 4234 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 4293 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4294 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 4344
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 143411 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 143352 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143351 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 143301 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105686 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 105745 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105746 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 105796
>gb|AY387369.1| Uncultured eukaryote clone OT124 16S ribosomal RNA gene, partial sequence Length = 1056 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 20 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 79 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 130
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 136654 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 136595 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136594 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 136544 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 100224 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 100283 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100284 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 100334
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 139841 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 139782 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139781 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 139731 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 102789 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 102848 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102849 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 102899
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135384 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 135325 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135324 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 135274 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 99251 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 99310 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99311 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 99361
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 139651 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 139592 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139591 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 139541 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 102258 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 102317 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102318 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 102368
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 144240 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 144181 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144180 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 144130 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105820 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 105879 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105880 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 105930
>gb|DQ129644.1| Uncultured bacterium clone AKIW961 16S ribosomal RNA gene, partial sequence Length = 1448 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 17 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 76 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 127
>gb|DQ129643.1| Uncultured bacterium clone AKIW940 16S ribosomal RNA gene, partial sequence Length = 1447 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 19 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 78 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 129
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 135471 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 135412 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135411 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 135361 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 97974 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 98033 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98034 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 98084
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 147298 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 147239 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147238 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 147188 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106030 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 106089 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106090 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 106140
>gb|DQ419724.1| Uncultured bacterium clone biogas-DT-b7 16S ribosomal RNA gene, partial sequence Length = 472 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 19 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 78 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 129
>gb|DQ419659.1| Uncultured bacterium clone biogas-DM1-b84 16S ribosomal RNA gene, partial sequence Length = 496 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 19 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 78 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 129
>gb|DQ419657.1| Uncultured bacterium clone biogas-DM1-b10 16S ribosomal RNA gene, partial sequence Length = 490 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 19 ggatgaacgctggcggcatgcttaacacatgcaagtcaaacgggaagtggtgtttccagt 78 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 79 ggcgaacgggtgagtaatgcgtaagaacctgcccttgggaggggaacaaca 129
>gb|DQ419656.1| Uncultured bacterium clone biogas-DM1-b12 16S ribosomal RNA gene, partial sequence Length = 483 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 19 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 78 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 129
>gb|DQ419617.1| Uncultured bacterium clone biogas-DE-b37 16S ribosomal RNA gene, partial sequence Length = 471 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 19 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 78 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 129
>gb|DQ000201.1| Trewia nudiflora 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1434 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 13 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 72 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 123
>emb|AJ639615.1| Vitis vinifera plastid partial 16S rRNA gene Length = 1486 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 34 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 93 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 144
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 82279 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 82338 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82339 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 82389
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 136654 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 136595 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136594 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 136544 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 100110 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 100169 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100170 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 100220
>gb|AF244554.1|AF244554 Ginkgo biloba 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1455 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 10 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 69 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 120
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 42351 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 42410 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 42411 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 42461
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 27352 ggatgaacgctggcggcatgctttacacatgcaagtcgaacgggaagtggtgtttccagt 27293 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27292 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 27242
>emb|V00165.1|CHNTRN1 Tobacco chloroplast genes for 16S ribosomal RNA and tRNA-Val Length = 2113 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 655 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 714 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 765
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 140461 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 140402 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140401 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 140351 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 101964 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 102023 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102024 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 102074
>gb|DQ211347.1| Plastid transformation vector pPRV110L, complete sequence Length = 4128 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2832 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 2891 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2892 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 2942
>gb|AF061065.1|AF061065 Plastid transformation vector pGS31A 16S ribosomal RNA gene, partial sequence; aminoglycoside 3'-adenyltransferase (aadA) gene, complete cds Length = 3136 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 572 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 513 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 462
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 83428 ggatgaacgctggcggcatgctttacacatgcaagtcgaacgggaagtggtgtttccagt 83369 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83368 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 83318
>gb|U66264.1|NTU66264 Nicotiana tabacum ubiquitin mRNA, complete cds Length = 523 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 13 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 72 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 123
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 139926 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 139867 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139866 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 139816 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 102481 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 102540 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102541 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 102591
>emb|AJ867649.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact22 Length = 1416 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 114 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 173 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 224
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 138105 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 138046 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138045 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 137995 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 99866 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 99925 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99926 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 99976
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 137610 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 137551 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137550 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 137500 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 101039 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 101098 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101099 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 101149
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 139839 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 139780 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139779 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 139729 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 102787 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 102846 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102847 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 102897
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 136647 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 136588 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136587 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 136537 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 100222 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 100281 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100282 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 100332
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 139580 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 139521 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139520 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 139470 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 102558 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 102617 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102618 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 102668
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 143591 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 143532 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143531 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 143481 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105708 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 105767 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105768 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 105818
>emb|X70938.1|CHNPTRNVI N.plumbaginifolia chloroplast 16SrDNA, trnV and trnI genes for 16S ribosomal RNA, transfer RNA-Val and transfer RNA-Ile (5'exon) Length = 3274 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1254 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 1313 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1314 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 1364
>gb|U12815.1|XXU12815 Transformation vector pPRV112B, plastid targeting segment Length = 4126 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1297 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 1238 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1237 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 1187
>gb|U12814.1|XXU12814 Transformation vector pPRV112A, plastid targeting segment Length = 4126 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1297 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 1238 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1237 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 1187
>gb|U12813.1|XXU12813 Transformation vector pPRV111B, plastid targeting segment Length = 4174 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1297 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 1238 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1237 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 1187
>gb|U12812.1|XXU12812 Transformation vector pPRV111A, plastid targeting segment Length = 4174 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1297 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 1238 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1237 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 1187
>gb|U12811.1|XXU12811 Transformation vector pPRV100B, plastid targeting segment Length = 3019 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1297 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 1238 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1237 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 1187
>gb|U12810.1|XXU12810 Transformation vector pPRV100A, plastid targeting segment Length = 3019 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1297 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 1238 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1237 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 1187
>gb|U12809.1|XXU12809 Transformation vector pPRV1, plastid targeting seqment Length = 2962 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1297 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 1238 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1237 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 1187
>gb|AY145639.1| Uncultured eukaryote FL10D12 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 699 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 19 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 78 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 129
>gb|M82900.1|TOBCP16SRD Nicotiana plumbaginifolia 16S rRNA gene Length = 1490 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 28 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 87 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 138
>gb|U03555.1|AIU03555 Alnus incana chloroplast 16S rRNA gene, complete sequence Length = 1842 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 202 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 261 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 312
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 204 bits (103), Expect = 3e-49 Identities = 109/111 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 84367 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 84426 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84427 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 84477
>gb|AY795633.2| Uncultured Oscillatoriales cyanobacterium clone Veg.-frei_9_29.07 16S ribosomal RNA gene, partial sequence Length = 646 Score = 202 bits (102), Expect = 1e-48 Identities = 108/110 (98%) Strand = Plus / Plus Query: 2 gatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtg 61 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1 gatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagtg 60 Query: 62 gcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 110
>gb|AY102879.1| Uncultured embryophyte clone BCM1-32B 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 685 Score = 202 bits (102), Expect = 1e-48 Identities = 111/114 (97%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 20 ggatgaacgctggcggcatgcttcacacatgcaagtcggacgggaagtggtgtttccagt 79 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 133
>emb|AJ007728.1|OMI007728 Orobanche minor chloroplast trnV(GAC) gene, 16S rRNA gene, trnI(GAU) pseudogene, trnA(UGC) pseudogene and partial 23S rRNA gene Length = 2604 Score = 202 bits (102), Expect = 1e-48 Identities = 111/114 (97%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 379 ggatgaacgctggcgacatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 438 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 492
>gb|DQ417650.1| Festuca ovina 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 200 bits (101), Expect = 4e-48 Identities = 104/105 (99%) Strand = Plus / Plus Query: 10 ctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgg 69 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1 ctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcggacgg 60 Query: 70 gtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 105
>dbj|AK060838.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D02, full insert sequence Length = 1426 Score = 198 bits (100), Expect = 2e-47 Identities = 360/444 (81%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 180 tggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattggaggt 239 |||||||||||||| || || || |||||||| ||||||||||||||||||||||| || Sbjct: 582 tggagtggtgttggtatcgaggactggtggagaaatgaacagttctgggtcattggtggc 641 Query: 240 atctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggtatcgac 299 | ||||||||||| || || || || |||||||||||||| ||| | || || || || Sbjct: 642 acatctgcccatctcttcgctgtgttccagggtcttctgaaagtgttagcaggaattgat 701 Query: 300 accaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgctgagctctac 359 |||||||||||||| ||||||||||| || || || || |||||||||||||| ||| Sbjct: 702 accaacttcactgttacctcaaaggcgtccgatgaggatggtgactttgctgagctatac 761 Query: 360 atgttcaagtggacgacgcttctcatccctccgacgaccat-cttgatcattaacatggt 418 ||||||||||||| | || ||||| || ||||| ||| | |||| |||| ||| |||| Sbjct: 762 gtgttcaagtggaccagtctcctcattcccccgaccaccgtgcttg-tcatcaacctggt 820 Query: 419 cggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttgggggccgct 478 || | || || |||| || || ||||| ||||| ||||||||||| ||||| || || Sbjct: 821 gggcatggtggcgggtatatcatatgccattaacagcggttaccaatcatggggtcctct 880 Query: 479 cttcgggaagctcttctttgccttctgggtgattgttcacttataccccttcctcaaggg 538 ||| || ||||||||||| || |||||||||| | | | ||||||||||||||||| Sbjct: 881 ctttggaaagctcttcttctccatctgggtgatcctccgtctctaccccttcctcaaggg 940 Query: 539 tcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgtcctcctggc 598 ||| ||||||||||| |||||||| ||||| || |||||||||||| | ||||||| || Sbjct: 941 tctcatgggcaggcagaaccgcactccgaccatcgtcatcgtctggtcgatcctcctcgc 1000 Query: 599 ttcaatcttctccttgctgtgggt 622 || ||||||||| | |||||||| Sbjct: 1001 gtcgatcttctcccttctgtgggt 1024
>gb|U76911.1|CPU76911 Carica papaya 16S ribosomal RNA, chloroplast gene for chloroplast RNA, partial sequence Length = 1563 Score = 198 bits (100), Expect = 2e-47 Identities = 106/108 (98%) Strand = Plus / Plus Query: 4 tgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggc 63 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 13 tgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagtggc 72 Query: 64 gaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73 ggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 120
>emb|AJ867654.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact63 Length = 1442 Score = 198 bits (100), Expect = 2e-47 Identities = 106/108 (98%) Strand = Plus / Plus Query: 4 tgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggc 63 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2 tgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagtggc 61 Query: 64 gaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 109
>emb|AJ867652.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact35 Length = 1441 Score = 198 bits (100), Expect = 2e-47 Identities = 106/108 (98%) Strand = Plus / Plus Query: 4 tgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggc 63 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2 tgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagtggc 61 Query: 64 gaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 109
>emb|AJ867650.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact24 Length = 1440 Score = 198 bits (100), Expect = 2e-47 Identities = 106/108 (98%) Strand = Plus / Plus Query: 4 tgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggc 63 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2 tgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagtggc 61 Query: 64 gaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 109
>gb|J01440.1|SPICPRG16 Spinach chloroplast 16S rRNA gene (5' end) with Val-tRNA gene Length = 830 Score = 198 bits (100), Expect = 2e-47 Identities = 110/112 (98%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 719 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 778 Query: 61 ggc-gaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 779 ggcggaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 830
>emb|X72584.1|CHCRTRNAV C.reflexa chloroplast genes trnA, trnI, trnV, rps7, rpS12, ndhB and 16S rDNA Length = 8807 Score = 196 bits (99), Expect = 6e-47 Identities = 108/111 (97%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 3721 ggatgaacgctggcggcatgcttaacacatgcaagtcgtacgggaagtggtgtttccagt 3662 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 3661 ggcggacgggtgagtagcgcgtaagaacctgcccttgggaggggaacaaca 3611
>gb|DQ129642.1| Uncultured bacterium clone AKIW415 16S ribosomal RNA gene, partial sequence Length = 1449 Score = 196 bits (99), Expect = 6e-47 Identities = 108/111 (97%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 18 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 77 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 78 ggcggacgggcgagtaacgcgtaagaacctgcccttgggaggggaacaaca 128
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 196 bits (99), Expect = 6e-47 Identities = 108/111 (97%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 143345 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 143286 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 143285 ggcggacgggtgagtaacgcgtaagaacctgcccttgggagggggacaaca 143235 Score = 196 bits (99), Expect = 6e-47 Identities = 108/111 (97%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106600 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 106659 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 106660 ggcggacgggtgagtaacgcgtaagaacctgcccttgggagggggacaaca 106710
>gb|DQ419753.1| Uncultured bacterium clone biogas-LD-B46 16S ribosomal RNA gene, partial sequence Length = 472 Score = 196 bits (99), Expect = 6e-47 Identities = 108/111 (97%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 19 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagcggtgtttccagt 78 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 129
>gb|AY855838.1| Maytenus hookeri 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1452 Score = 196 bits (99), Expect = 6e-47 Identities = 108/111 (97%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 20 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaattggtgtttccagt 79 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 130
>gb|AF244560.1|AF244560 Nymphaea tuberosa 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1463 Score = 196 bits (99), Expect = 6e-47 Identities = 108/111 (97%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 12 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 71 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 72 ggcggacgggtgagtaacgcgtaagaacctgcccttgggagggggacaaca 122
>gb|AF244555.1|AF244555 Gnetum leyboldii 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1448 Score = 196 bits (99), Expect = 6e-47 Identities = 108/111 (97%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 82 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 83 ggcggacgggtgagtaatgcgtgagaacctgcccttgggaggggaacaaca 133
>gb|AF244551.1|AF244551 Cycas revoluta 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1469 Score = 196 bits (99), Expect = 6e-47 Identities = 108/111 (97%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 17 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 76 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 77 ggcggacgggtgagtaacgcgtaagaacctgcccctgggaggggaacaaca 127
>emb|AJ867655.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact67 Length = 1453 Score = 196 bits (99), Expect = 6e-47 Identities = 105/107 (98%) Strand = Plus / Plus Query: 5 gaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcg 64 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4 gaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagtggcg 63 Query: 65 aacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 gacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 110
>emb|AJ867653.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact62 Length = 1448 Score = 196 bits (99), Expect = 6e-47 Identities = 105/107 (98%) Strand = Plus / Plus Query: 5 gaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcg 64 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4 gaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagtggcg 63 Query: 65 aacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 gacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 110
>emb|AJ278626.1|CRE278626 Cuscuta reflexa chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2191 Score = 196 bits (99), Expect = 6e-47 Identities = 108/111 (97%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 416 ggatgaacgctggcggcatgcttaacacatgcaagtcgtacgggaagtggtgtttccagt 475 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 476 ggcggacgggtgagtagcgcgtaagaacctgcccttgggaggggaacaaca 526
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 196 bits (99), Expect = 6e-47 Identities = 108/111 (97%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 770 ggatgaacgctggcggcatgctttacacatgcaagtcggacgggaagtggtgtttccagt 829 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 830 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggagggggacaaca 880
>emb|X51598.1|PS16SVAL P.sativum 16S rRNA & tRNA-Val chloroplast genes Length = 2315 Score = 196 bits (99), Expect = 6e-47 Identities = 108/111 (97%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 502 ggatgaacgctggcggcatgctttacacatgcaagtcggacgggaagtggtgtttccagt 561 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 562 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggagggggacaaca 612
>gb|L37580.1|RCNRGD Ricinis communis 16S ribosomal RNA (16S rRNA) gene Length = 1423 Score = 196 bits (99), Expect = 6e-47 Identities = 108/111 (97%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 5 ggatgaacgctggcggcatgcttaacacatacaagtcggacgggaagtggtgtttccagt 64 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 115
>gb|M16862.1|PEACPVD Pea chloroplast Val-tRNA gene and 16S ribosomal RNA gene, 5' end Length = 545 Score = 196 bits (99), Expect = 6e-47 Identities = 108/111 (97%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 357 ggatgaacgctggcggcatgctttacacatgcaagtcggacgggaagtggtgtttccagt 416 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 417 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggagggggacaaca 467
>gb|M16874.1|PEACPV16S Pea chloroplast tRNA-Val gene and 16S ribosomal RNA gene, 5' end Length = 545 Score = 196 bits (99), Expect = 6e-47 Identities = 108/111 (97%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 357 ggatgaacgctggcggcatgctttacacatgcaagtcggacgggaagtggtgtttccagt 416 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 417 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggagggggacaaca 467
>gb|M30826.1|PEACPRG16S Pea chloroplast Val-tRNA and 16S rRNA gene, 5' end Length = 545 Score = 196 bits (99), Expect = 6e-47 Identities = 108/111 (97%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 357 ggatgaacgctggcggcatgctttacacatgcaagtcggacgggaagtggtgtttccagt 416 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 417 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggagggggacaaca 467
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 196 bits (99), Expect = 6e-47 Identities = 108/111 (97%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 770 ggatgaacgctggcggcatgctttacacatgcaagtcggacgggaagtggtgtttccagt 829 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 830 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggagggggacaaca 880
>gb|AY191350.1| Uncultured marine eukaryote isolate ODP1176A22X_6_B 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 828 Score = 194 bits (98), Expect = 3e-46 Identities = 111/114 (97%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 2 gatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttc-cagt 60 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1 gatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttctcagt 60 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 194 bits (98), Expect = 3e-46 Identities = 110/114 (96%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 21408 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacaggaagtggtgtttctagt 21349 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 21348 ggcgaatgggtgagtaacgcgtaagaacctgcctttgggaggggaacaacaact 21295
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 194 bits (98), Expect = 3e-46 Identities = 110/114 (96%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 90331 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacaggaagtggtgtttctagt 90272 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 90271 ggcgaatgggtgagtaacgcgtaagaacctgcctttgggaggggaacaacaact 90218
>gb|AY168732.2| Angiosperm environmental sample clone Hot Creek 1 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1451 Score = 194 bits (98), Expect = 3e-46 Identities = 110/114 (96%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 1432 ggatgaacgctggcggcatgcttaacacatgttagtcggacgggaagtggtgtttccagt 1373 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1372 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 1319
>gb|U24586.1|JVU24586 Juniperus virginiana chloroplast 16S rRNA gene, partial sequence Length = 1454 Score = 194 bits (98), Expect = 3e-46 Identities = 101/102 (99%) Strand = Plus / Plus Query: 10 ctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgg 69 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgg 60 Query: 70 gtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gtgagtaatgcgtaagaacctgcccttgggaggggaacaaca 102
>gb|AY162181.1| Populus tremuloides cellulose synthase (CesA4) mRNA, complete cds Length = 3640 Score = 192 bits (97), Expect = 1e-45 Identities = 379/473 (80%) Strand = Plus / Plus Query: 150 atttttgccaccggtatccttgagatgaggtggagtggtgttggcattgacgagtggtgg 209 |||||||| || || || |||||| | || |||||||| ||||| ||||| || |||||| Sbjct: 2743 atttttgctactggaatacttgagcttagatggagtggagttggtattgaagactggtgg 2802 Query: 210 aggaatgaacagttctgggtcattggaggtatctctgcccatctgtttgccgtctttcag 269 ||||||||||| |||||||||||||| |||| || || ||||| |||||||||||||| Sbjct: 2803 aggaatgaacaattctgggtcattggtggtacatcagctcatctctttgccgtctttcaa 2862 Query: 270 ggtcttctgaaggtgcttgccggtatcgacaccaacttcactgtcacctcaaaggctaat 329 || ||| ||||||||||||| ||||| || ||||||||||||||||| |||||||| | Sbjct: 2863 ggacttttgaaggtgcttgcaggtattgataccaacttcactgtcacttcaaaggcatct 2922 Query: 330 gacgaagaaggcgactttgctgagctctacatgttcaagtggacgacgcttctcatccct 389 || ||||| || || ||||| ||||| || ||||||| ||||| | |||||||||||| Sbjct: 2923 gatgaagatggggattttgcagagctttatgtgttcaaatggacatctcttctcatccct 2982 Query: 390 ccgacgaccatcttgatcattaacatggtcggtgtcgttgctggtacctcctacgccatc 449 || || || || | | | |||||||| ||| | || |||||| ||||| ||||| Sbjct: 2983 ccaaccacagtcattgtactaaacatggtgggtattgtggctggtgtgtcctatgccata 3042 Query: 450 aacagtggttaccaatcttgggggccgctcttcgggaagctcttctttgccttctgggtg 509 |||||||| ||||| || ||||| || ||||| || |||||||||||||| | ||||| Sbjct: 3043 aacagtggataccagtcatggggtcctctctttggcaagctcttctttgctatttgggtc 3102 Query: 510 attgttcacttataccccttcctcaagggtcttatgggcaggcaaaaccgcacaccgacg 569 |||| || || || || |||||||||||| | |||| ||||||| || || || || Sbjct: 3103 attgcccatttgtatcctttcctcaagggtttgctgggtcggcaaaatcgtacgccaaca 3162 Query: 570 attgtcatcgtctgggctgtcctcctggcttcaatcttctccttgctgtgggt 622 ||||||||||||||| || | ||||| || || || ||||||||||| ||||| Sbjct: 3163 attgtcatcgtctggtctattctccttgcctccattttctccttgctatgggt 3215
>gb|DQ417649.1| Agrostis capillaris 16S ribosomal RNA gene, partial sequence; plastid Length = 1406 Score = 192 bits (97), Expect = 1e-45 Identities = 103/105 (98%) Strand = Plus / Plus Query: 10 ctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgg 69 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctggcggcatgccttacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgg 60 Query: 70 gtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 105
>emb|X04182.1|CHSARRN1 Sinapis alba chloroplast gene for tRNA-Val and 16S rDNA 5' end Length = 1793 Score = 192 bits (97), Expect = 1e-45 Identities = 109/112 (97%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1666 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 1725 Query: 61 ggc-gaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 ||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1726 ggcggnacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 1777
>gb|AF047637.1| Uncultured eubacterium TRB18 16S ribosomal RNA gene, partial sequence Length = 348 Score = 190 bits (96), Expect = 4e-45 Identities = 109/112 (97%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 60 Query: 61 ggcgaacgggtgagtaacgcgtaag-aacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 61 ggcggacgggtgagtaacgcgtaagaaacctgcccttgggaggggaacaaca 112
>gb|AY989370.1| Uncultured soil bacterium clone L1A.11G12 16S ribosomal RNA gene, partial sequence Length = 701 Score = 190 bits (96), Expect = 4e-45 Identities = 102/104 (98%) Strand = Plus / Plus Query: 8 cgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaac 67 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 1 cgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagtggcggac 60 Query: 68 gggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 104
>gb|AF200526.1|AF200526 Zea mays cellulose synthase-2 (CesA-2) mRNA, complete cds Length = 3725 Score = 190 bits (96), Expect = 4e-45 Identities = 359/444 (80%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 180 tggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattggaggt 239 |||||||||||||||||||| || |||||||| ||||| ||||| ||||| ||||| || Sbjct: 2891 tggagtggtgttggcattgaagattggtggagaaatgagcagttttgggttattggtggc 2950 Query: 240 atctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggtatcgac 299 | |||||||||||| || || || || |||||||| ||||| ||| | || || || || Sbjct: 2951 acctctgcccatctcttcgcggtgttccagggtctgctgaaagtgttggctgggattgat 3010 Query: 300 accaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgctgagctctac 359 ||||||||||| || ||||||||||| ||| || || ||||||||||||||||| || Sbjct: 3011 accaacttcacagttacctcaaaggcatctgatgaggatggcgactttgctgagctatat 3070 Query: 360 atgttcaagtggacgacgcttctcatccctccgacgac-catcttgatcattaacatggt 418 ||||||||||||| | | |||||||||||||| || ||||| |||||||| |||| Sbjct: 3071 gtgttcaagtggaccagtttgctcatccctccgaccactgttcttg-tcattaacctggt 3129 Query: 419 cggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttgggggccgct 478 ||| | || || || | || || ||||| ||||| || |||||||| ||||| ||||| Sbjct: 3130 cggaatggtggcaggaatttcgtatgccattaacagcggctaccaatcctggggtccgct 3189 Query: 479 cttcgggaagctcttctttgccttctgggtgattgttcacttataccccttcctcaaggg 538 ||| || ||||| ||||| | |||||||||| | || | ||||||||||||||||| Sbjct: 3190 ctttggaaagctgttcttctcgatctgggtgatcctccatctctaccccttcctcaaggg 3249 Query: 539 tcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgtcctcctggc 598 ||| ||||||||||| |||||||| || || || |||||||| ||| | ||||||| || Sbjct: 3250 tctcatgggcaggcagaaccgcacgccaacaatcgtcatcgtttggtccatcctccttgc 3309 Query: 599 ttcaatcttctccttgctgtgggt 622 || |||||||||||||||||||| Sbjct: 3310 gtctatcttctccttgctgtgggt 3333
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 188 bits (95), Expect = 2e-44 Identities = 107/111 (96%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 56159 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccggt 56100 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 56099 ggcggacgggtgagtaacgcgtaagaacctgcccctgggaggggaacaaca 56049 Score = 188 bits (95), Expect = 2e-44 Identities = 107/111 (96%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 33669 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccggt 33728 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 33729 ggcggacgggtgagtaacgcgtaagaacctgcccctgggaggggaacaaca 33779
>emb|Y09579.1|PSCOP1PRT P.sativum mRNA for Cop1 protein Length = 2871 Score = 188 bits (95), Expect = 2e-44 Identities = 107/111 (96%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 27 ggatgaacgctggcggcatgctttacacatgcaagtcggacgggaagtggtgtttccagt 86 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 87 ggcgaacgggtgagtaacgcgtaaaaacctgcccttgggagggggacaaca 137
>gb|DQ014508.1| Eucalyptus grandis cellulose synthase 4 (CesA4) mRNA, complete cds Length = 3782 Score = 188 bits (95), Expect = 2e-44 Identities = 347/431 (80%) Strand = Plus / Plus Query: 117 gccagtatctggttcattgctctcttcctttcaatttttgccaccggtatccttgagatg 176 |||||||| ||||||||| | ||||||||||| ||||||||||| ||| || | |||||| Sbjct: 2849 gccagtatttggttcatttcgctcttcctttccatttttgccactggtgtcttggagatg 2908 Query: 177 aggtggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattgga 236 ||||||||||||||||| | ||| || |||||||||||||| || | ||||| ||||| Sbjct: 2909 aggtggagtggtgttggaactgatgaatggtggaggaatgagcaactttgggtgattggt 2968 Query: 237 ggtatctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggtatc 296 ||| | ||||||||||| ||||||||||| ||||| || || || || | || || || Sbjct: 2969 ggtgtgtctgcccatctttttgccgtcttccagggcctgctcaaagtcttggctggaatt 3028 Query: 297 gacaccaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgctgagctc 356 ||||||||||| ||||| || || || || || ||||| || || | ||| || ||| Sbjct: 3029 gacaccaactttactgttacatccaaagcatcagatgaagatggggattctgccgaactc 3088 Query: 357 tacatgttcaagtggacgacgcttctcatccctccgacgaccatcttgatcattaacatg 416 ||||||||||||||||| || |||||||||||||| || || || | ||||| ||| || Sbjct: 3089 tacatgttcaagtggacaactcttctcatccctcccactacgctcctcatcataaacttg 3148 Query: 417 gtcggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttgggggccg 476 ||||| ||||| ||||| | || || |||||||| ||||| || || || ||||| || Sbjct: 3149 gtcggggtcgtggctgggatttcgtatgccatcaatagtggatatcagtcgtggggtcca 3208 Query: 477 ctcttcgggaagctcttctttgccttctgggtgattgttcacttataccccttcctcaag 536 || || || ||| | |||||||| || |||||||| |||||| | |||||||||||||| Sbjct: 3209 ctttttggtaagttgttctttgctttttgggtgatcgttcacctgtaccccttcctcaaa 3268 Query: 537 ggtcttatggg 547 ||||| ||||| Sbjct: 3269 ggtctgatggg 3279
>dbj|AK058805.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-B09, full insert sequence Length = 551 Score = 188 bits (95), Expect = 2e-44 Identities = 98/99 (98%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24 ggatgaacgccggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 83 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttggg 99 ||||||||||||||||||||||||||||||||||||||| Sbjct: 84 ggcgaacgggtgagtaacgcgtaagaacctgcccttggg 122
>emb|AJ232810.1|UEU232810 Unidentified eubacterium 16S rRNA gene (clone TRE1) Length = 519 Score = 188 bits (95), Expect = 2e-44 Identities = 107/111 (96%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 17 ggatgaacgctggcggcatgctttacacatgcaagtcggacgggaagtggtgtttccagt 76 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 77 ggcggacgggtgagtaacgcgtaagaacctgcccttgggagggggacaaca 127
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 188 bits (95), Expect = 2e-44 Identities = 107/111 (96%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 134180 ggatgaacgctggcggcatgccttacacatgcaagtcggacgggaagtggtgtttccagt 134121 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134120 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 134070 Score = 188 bits (95), Expect = 2e-44 Identities = 107/111 (96%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 98276 ggatgaacgctggcggcatgccttacacatgcaagtcggacgggaagtggtgtttccagt 98335 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98336 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 98386
>emb|AJ278625.1|CSU278625 Cuscuta subinclusa chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2452 Score = 188 bits (95), Expect = 2e-44 Identities = 107/111 (96%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 787 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||| |||||||||||||||||| ||| ||||||||||| Sbjct: 788 ggcggacgggtgagtagcgcgtaagaacctgccctcgggtggggaacaaca 838
>emb|AJ278624.1|COD278624 Cuscuta odorata chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2231 Score = 188 bits (95), Expect = 2e-44 Identities = 107/111 (96%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 603 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 662 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||| |||||||||||||||||| ||| ||||||||||| Sbjct: 663 ggcggacgggtgagtagcgcgtaagaacctgccctcgggtggggaacaaca 713
>emb|AJ278623.1|CGR278623 Cuscuta gronovii chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2291 Score = 188 bits (95), Expect = 2e-44 Identities = 107/111 (96%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 653 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 712 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||| |||||||||||||||||| ||| ||||||||||| Sbjct: 713 ggcggacgggtgagtagcgcgtaagaacctgccctcgggtggggaacaaca 763
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 188 bits (95), Expect = 2e-44 Identities = 107/111 (96%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 597 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccggt 656 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 657 ggcggacgggtgagtaacgcgtaagaacctgcccctgggaggggaacaaca 707
>emb|AJ401355.1|CPL401355 Cuscuta platyloba chloroplast 16S rRNA gene Length = 1998 Score = 188 bits (95), Expect = 2e-44 Identities = 107/111 (96%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 337 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||| |||||||||||||||||| ||| ||||||||||| Sbjct: 338 ggcggacgggtgagtagcgcgtaagaacctgccctcgggtggggaacaaca 388
>emb|AJ401353.1|CCA401353 Cuscuta campestris chloroplast 16S rRNA gene Length = 1990 Score = 188 bits (95), Expect = 2e-44 Identities = 107/111 (96%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 334 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||| |||||||||||||||||| ||| ||||||||||| Sbjct: 335 ggcggacgggtgagtagcgcgtaagaacctgccctcgggtggggaacaaca 385
>gb|L37579.1|EUFRGD Euphorbia pulcherrima 16S ribosomal RNA (16S rRNA) gene Length = 1420 Score = 188 bits (95), Expect = 2e-44 Identities = 108/111 (97%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 64 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 65 ggcggacgggtgagtaacgcgtaagaacct-cccttgggaggggaacaaca 114
>gb|AY818945.1| Plantago rugelii 16S ribosomal RNA (rrn16) gene, partial sequence; chloroplast Length = 1402 Score = 186 bits (94), Expect = 6e-44 Identities = 100/102 (98%) Strand = Plus / Plus Query: 10 ctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgg 69 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1 ctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagtggcggacgg 60 Query: 70 gtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 102
>gb|DQ417652.1| Glechoma hederacea 16S ribosomal RNA gene, partial sequence; plastid Length = 1403 Score = 186 bits (94), Expect = 6e-44 Identities = 100/102 (98%) Strand = Plus / Plus Query: 10 ctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgg 69 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1 ctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagtggcggacgg 60 Query: 70 gtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 102
>gb|AF200525.1|AF200525 Zea mays cellulose synthase-1 (CesA-1) mRNA, complete cds Length = 3752 Score = 186 bits (94), Expect = 6e-44 Identities = 381/474 (80%), Gaps = 2/474 (0%) Strand = Plus / Plus Query: 150 atttttgccaccggtatccttgagatgaggtggagtggtgttggcattgacgagtggtgg 209 ||||||||||| ||||| | ||| | || |||||||||||||||||||| || |||||| Sbjct: 2868 atttttgccactggtatattggagcttagatggagtggtgttggcattgaagattggtgg 2927 Query: 210 aggaatgaacagttctgggtcattggaggtatctctgcccatctgtttgccgtctttcag 269 || ||||| ||||| ||||| ||||| || | |||||||||||| || || || || ||| Sbjct: 2928 agaaatgagcagttttgggttattggtggcacctctgcccatctcttcgcagtgttccag 2987 Query: 270 ggtcttctgaaggtgcttgccggtatcgacaccaacttcactgtcacctcaaaggctaat 329 ||||| ||||| ||| | || || || || ||||||||||| || ||||||||||| | Sbjct: 2988 ggtctgctgaaagtgttggctgggattgataccaacttcacagttacctcaaaggcatct 3047 Query: 330 gacgaagaaggcgactttgctgagctctacatgttcaagtggacgacgcttctcatccct 389 || || || ||||||||||||||||| || ||||||||||||| | | ||||| ||| Sbjct: 3048 gatgaggatggcgactttgctgagctatatgtgttcaagtggaccagtttgctcattcct 3107 Query: 390 ccgacgac-catcttgatcattaacatggtcggtgtcgttgctggtacctcctacgccat 448 ||||| || ||||| |||||||| ||||||| | || || || | || || ||||| Sbjct: 3108 ccgaccactgttcttg-tcattaacctggtcggaatggtggcaggaatttcttatgccat 3166 Query: 449 caacagtggttaccaatcttgggggccgctcttcgggaagctcttctttgccttctgggt 508 |||||||| |||||||| ||||| |||||||| || ||||| ||||| | ||||||| Sbjct: 3167 taacagtggctaccaatcctggggtccgctctttggaaagctgttcttctcgatctgggt 3226 Query: 509 gattgttcacttataccccttcctcaagggtcttatgggcaggcaaaaccgcacaccgac 568 ||| | || | |||||||||||||||||||| ||||| ||||| ||||||||||| || Sbjct: 3227 gatcctccatctctaccccttcctcaagggtctcatgggaaggcagaaccgcacaccaac 3286 Query: 569 gattgtcatcgtctgggctgtcctcctggcttcaatcttctccttgctgtgggt 622 || ||||| |||||| | |||| || || || |||||||||||||||||||| Sbjct: 3287 aatcgtcattgtctggtccatccttcttgcatctatcttctccttgctgtgggt 3340
>gb|DQ098848.1| Uncultured bacterium clone MLLC20 16S ribosomal RNA gene, partial sequence Length = 719 Score = 182 bits (92), Expect = 1e-42 Identities = 98/100 (98%) Strand = Plus / Plus Query: 15 ggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgag 74 |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 19 ggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagtggcggacgggtgag 78 Query: 75 taacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||| Sbjct: 79 taacgcgtaagaacctgcccttgggaggggaacaacaact 118
>emb|X73893.1|CPHATV H.annuus chloroplast transfer RNA-Val and 16S rRNA genes Length = 762 Score = 182 bits (92), Expect = 1e-42 Identities = 101/104 (97%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 659 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 718 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggagggg 104 |||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 719 ggcggacgggtgagtaacgcgtaagaacctacccttgggagggg 762
>gb|AY895148.1| Chloroplast transformation vector pCLT327 Cry1Ab (cry1Ab) and AadA (aadA) genes, complete cds; tRNA-Val gene, complete sequence; and 16S ribosomal RNA, partial sequence Length = 8483 Score = 180 bits (91), Expect = 4e-42 Identities = 106/111 (95%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 7189 ggatgaacgctggcggcatgccttacacatgcaagtcggacgggaagtggtgtttccagt 7248 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 7249 ggcggacgggtgagtaacgcgtaagaacctacccttgggaggggaacaaca 7299
>gb|AF392785.1| Uncultured bacterium clone TCB1 16S ribosomal RNA gene, partial sequence Length = 474 Score = 180 bits (91), Expect = 4e-42 Identities = 106/111 (95%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 20 ggatgaacgctggcggcatgccttacacatgcaagtcggacgggaagtggtgtttccagt 79 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 80 ggcggacgggtgagtaacgcgtaagaacctacccttgggaggggaacaaca 130
>gb|AC149307.17| Medicago truncatula clone mth2-91a15, complete sequence Length = 136553 Score = 180 bits (91), Expect = 4e-42 Identities = 106/111 (95%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||| Sbjct: 79192 ggatgaacgctggcggcatgctttacacatgcaaatcgaacgggaagtagtgtttccagt 79133 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 79132 ggcggacgggtgagtaacgcgtaagaacttgcccttgggaggggaacaaca 79082
>emb|X07675.1|CHGMX Soybean plastid DNA for rps12, rps7, 16S rRNA, tRNA-Val, NADH dehydrogenase and ORF 143 Length = 5680 Score = 180 bits (91), Expect = 4e-42 Identities = 106/111 (95%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 1452 ggatgaacgctggcggcatgccttacacatgcaagtcggacgggaagtggtgtttccagt 1393 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1392 ggcggacgggtgagtaacgcgtaagaacctacccttgggaggggaacaaca 1342
>gb|DQ323045.1| Phaseolus vulgaris clone BAC-71F18, complete sequence Length = 157468 Score = 180 bits (91), Expect = 4e-42 Identities = 106/111 (95%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 5295 ggatgaacgctggcggcatgccttacacatgcaagtcggacgggaagtggtgtttccagt 5236 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5235 ggcggacgggtgagtaacgcgtaagaacctacccttgggaggggaacaaca 5185
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 180 bits (91), Expect = 4e-42 Identities = 106/111 (95%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 135765 ggatgaacgctggcggcatgccttacacatgcaagtcggacgggaagtggtgtttccagt 135706 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135705 ggcggacgggtgagtaacgcgtaagaacctacccttgggaggggaacaaca 135655 Score = 180 bits (91), Expect = 4e-42 Identities = 106/111 (95%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 99629 ggatgaacgctggcggcatgccttacacatgcaagtcggacgggaagtggtgtttccagt 99688 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 99689 ggcggacgggtgagtaacgcgtaagaacctacccttgggaggggaacaaca 99739
>gb|AY575999.1| Chloroplast transformation vector pCLT312, plastid targeting sequence Length = 4508 Score = 180 bits (91), Expect = 4e-42 Identities = 106/111 (95%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 3214 ggatgaacgctggcggcatgccttacacatgcaagtcggacgggaagtggtgtttccagt 3273 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 3274 ggcggacgggtgagtaacgcgtaagaacctacccttgggaggggaacaaca 3324
>emb|X06428.1|CHGMV16S Soybean chloroplast DNA for tRNA-Val and 16S rRNA Length = 2000 Score = 180 bits (91), Expect = 4e-42 Identities = 106/111 (95%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 ||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| Sbjct: 549 ggatgaacgctggcggcatgccttacacatgcaagtcggacgggaagtggtgtttccagt 608 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 609 ggcggacgggtgagtaacgcgtaagaacctacccttgggaggggaacaaca 659
>gb|DQ417653.1| Trifolium repens 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 178 bits (90), Expect = 2e-41 Identities = 99/102 (97%) Strand = Plus / Plus Query: 10 ctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgg 69 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1 ctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagtggcggacgg 60 Query: 70 gtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 61 gtgagtaacgcgtaagaacctgcccttgggagggggacaaca 102
>gb|DQ417651.1| Lotus corniculatus 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 178 bits (90), Expect = 2e-41 Identities = 99/102 (97%) Strand = Plus / Plus Query: 10 ctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgg 69 |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1 ctggcggcatgcataacacatgcaagtcggacgggaagtggtgtttccagtggcggacgg 60 Query: 70 gtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 102
>gb|L37578.1|ADQRGD Adriana glabrata 16S ribosomal RNA (16S rRNA) gene Length = 1428 Score = 178 bits (90), Expect = 2e-41 Identities = 96/98 (97%) Strand = Plus / Plus Query: 14 cggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtga 73 ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 8 cggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagtggcggacgggtga 67 Query: 74 gtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||||||||||||||||||||||||||||| Sbjct: 68 gtaacgcgtaagaacctgcccttgggaggggaacaaca 105
>gb|DQ098847.1| Uncultured bacterium clone MLLC19 16S ribosomal RNA gene, partial sequence Length = 774 Score = 174 bits (88), Expect = 2e-40 Identities = 104/108 (96%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 7 acgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaa 66 |||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||| | Sbjct: 6 acgctggcggcatgctta-cacatgcaagtcggacgggaagtggtgtctccagtggcgga 64 Query: 67 cgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 cgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacaact 112
>gb|AY043966.1| Uncultured embryophyte plastid clone NOS7.166WL 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 503 Score = 174 bits (88), Expect = 2e-40 Identities = 97/100 (97%) Strand = Plus / Plus Query: 12 ggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggt 71 |||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 1 ggcggcatgcttgacacatgcaagtcggacgggaagtggtgtttccagtggcggacgggt 60 Query: 72 gagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gagtaacgcgtaagaacctgcccttgggaggggaacaaca 100
>gb|AY043964.1| Uncultured embryophyte plastid clone NOW2.115WL 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 518 Score = 174 bits (88), Expect = 2e-40 Identities = 97/100 (97%) Strand = Plus / Plus Query: 12 ggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggt 71 ||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| Sbjct: 1 ggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttctagtggcggacgggt 60 Query: 72 gagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gagtaacgcgtaagaacctgcccttgggaggggaacaaca 100
>emb|X58864.1|CARRN16S C.americana plastid 16S rRNA gene and spacer region Length = 1978 Score = 174 bits (88), Expect = 2e-40 Identities = 107/112 (95%), Gaps = 1/112 (0%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttcc-ag 59 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||| | || Sbjct: 121 ggatgaacgctggcggcatgcttgacacatgcaagtcggacgggaagtggtgttttctag 180 Query: 60 tggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 232
>emb|AJ007448.1|PVU7448 Phaseolus vulgaris 16S rRNA gene, clone 8360, partial Length = 1057 Score = 174 bits (88), Expect = 2e-40 Identities = 103/108 (95%) Strand = Plus / Plus Query: 4 tgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggc 63 |||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||| Sbjct: 55 tgaacgctggcggcatgccttacacatgcaagtcggacgggaagtggtgtttccagtggc 114 Query: 64 gaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 | ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 115 ggacgggtgagtaacgcgtaagaacctacccttgggaggggaacaaca 162
>emb|AJ007447.1|PVU7447 Phaseolus vulgaris 16S rRNA gene, clone 8206, partial Length = 1012 Score = 174 bits (88), Expect = 2e-40 Identities = 103/108 (95%) Strand = Plus / Plus Query: 4 tgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggc 63 |||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||| Sbjct: 9 tgaacgctggcggcatgccttacacatgcaagtcggacgggaagtggtgtttccagtggc 68 Query: 64 gaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 | ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 69 ggacgggtgagtaacgcgtaagaacctacccttgggaggggaacaaca 116
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 172 bits (87), Expect = 9e-40 Identities = 87/87 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138769 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 138710 Query: 61 ggcgaacgggtgagtaacgcgtaagaa 87 ||||||||||||||||||||||||||| Sbjct: 138709 ggcgaacgggtgagtaacgcgtaagaa 138683 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 83 aagaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||||| Sbjct: 127276 aagaacctgcccttgggaggggaacaacaact 127245
>gb|AC130726.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0508G08, complete sequence Length = 141383 Score = 172 bits (87), Expect = 9e-40 Identities = 87/87 (100%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1856 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 1797 Query: 61 ggcgaacgggtgagtaacgcgtaagaa 87 ||||||||||||||||||||||||||| Sbjct: 1796 ggcgaacgggtgagtaacgcgtaagaa 1770
>gb|U24584.1|ETU24584 Ephedra trifurca chloroplast 16S rRNA gene, partial sequence Length = 1428 Score = 170 bits (86), Expect = 4e-39 Identities = 98/102 (96%) Strand = Plus / Plus Query: 10 ctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgg 69 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 1 ctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccggtggcggacgg 60 Query: 70 gtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||| |||| |||||||||||||||||||||||||||| Sbjct: 61 gtgagtaatgcgtgagaacctgcccttgggaggggaacaaca 102
>gb|AF392791.1| Uncultured bacterium clone LED2 16S ribosomal RNA gene, partial sequence Length = 470 Score = 168 bits (85), Expect = 1e-38 Identities = 105/111 (94%), Gaps = 3/111 (2%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 20 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggg---tccagt 76 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 ggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 127
>gb|AF526941.1| Uncultured angiosperm clone T5-20 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1497 Score = 168 bits (85), Expect = 1e-38 Identities = 94/97 (96%) Strand = Plus / Minus Query: 15 ggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgag 74 |||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||| Sbjct: 1465 ggcatgcttaacacatgcaagttggacgggaagtggtgtttccagtggcggacgggtgag 1406 Query: 75 taacgcgtaagaacctgcccttgggaggggaacaaca 111 ||||||||||||||||||||||||||||||||||||| Sbjct: 1405 taacgcgtaagaacctgcccttgggaggggaacaaca 1369
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 165 bits (83), Expect = 2e-37 Identities = 83/83 (100%) Strand = Plus / Minus Query: 7 acgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaa 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 172908 acgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaa 172849 Query: 67 cgggtgagtaacgcgtaagaacc 89 ||||||||||||||||||||||| Sbjct: 172848 cgggtgagtaacgcgtaagaacc 172826
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 165 bits (83), Expect = 2e-37 Identities = 83/83 (100%) Strand = Plus / Minus Query: 7 acgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaa 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28729 acgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcgaa 28670 Query: 67 cgggtgagtaacgcgtaagaacc 89 ||||||||||||||||||||||| Sbjct: 28669 cgggtgagtaacgcgtaagaacc 28647
>dbj|AK059639.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-B03, full insert sequence Length = 1569 Score = 163 bits (82), Expect = 9e-37 Identities = 85/86 (98%) Strand = Plus / Plus Query: 29 atgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgtaagaac 88 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1 atgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgcaagaac 60 Query: 89 ctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||| Sbjct: 61 ctgcccttgggaggggaacaacaact 86
>gb|DQ160156.1| Taraxacum officinale To120-3 mRNA, partial sequence Length = 301 Score = 161 bits (81), Expect = 4e-36 Identities = 87/89 (97%) Strand = Plus / Plus Query: 23 taacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgt 82 |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1 taacacatgcaagtcggacgggaagtggtgtttccagtggcggacgggtgagtaacgcgt 60 Query: 83 aagaacctgcccttgggaggggaacaaca 111 ||||||||||||||||||||||||||||| Sbjct: 61 aagaacctgcccttgggaggggaacaaca 89
>gb|DQ160142.1| Taraxacum officinale To120-2rc mRNA, partial sequence Length = 303 Score = 161 bits (81), Expect = 4e-36 Identities = 87/89 (97%) Strand = Plus / Minus Query: 23 taacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgt 82 |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 303 taacacatgcaagtcggacgggaagtggtgtttccagtggcggacgggtgagtaacgcgt 244 Query: 83 aagaacctgcccttgggaggggaacaaca 111 ||||||||||||||||||||||||||||| Sbjct: 243 aagaacctgcccttgggaggggaacaaca 215
>gb|AY110415.1| Zea mays CL1166_1 mRNA sequence Length = 3898 Score = 161 bits (81), Expect = 4e-36 Identities = 355/444 (79%), Gaps = 2/444 (0%) Strand = Plus / Plus Query: 180 tggagtggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattggaggt 239 |||||||||||||||||||| || |||||||| ||||| ||||| ||||| ||||| || Sbjct: 2904 tggagtggtgttggcattgaagattggtggagaaatgagcagttttgggttattggtggc 2963 Query: 240 atctctgcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggtatcgac 299 | |||||||||||| || || || || |||||||| ||||| ||| | || || || || Sbjct: 2964 acctctgcccatctcttcgcagtgttccagggtctgctgaaagtgttggctgggattgat 3023 Query: 300 accaacttcactgtcacctcaaaggctaatgacgaagaaggcgactttgctgagctctac 359 ||||||||||| || ||||||||||| ||| || || ||||||||||||||||| || Sbjct: 3024 accaacttcacagttacctcaaaggcatctgatgaggatggcgactttgctgagctatat 3083 Query: 360 atgttcaagtggacgacgcttctcatccctccgacgac-catcttgatcattaacatggt 418 ||||||||||||| | | ||||| |||||||| || ||||| |||||||| |||| Sbjct: 3084 gtgttcaagtggaccagtttgctcattcctccgaccactgttcttg-tcattaacctggt 3142 Query: 419 cggtgtcgttgctggtacctcctacgccatcaacagtggttaccaatcttgggggccgct 478 ||| | || || || | || || ||||| |||||||| |||||||| ||||| ||||| Sbjct: 3143 cggaatggtggcaggaatttcgtatgccattaacagtggctaccaatcctggggtccgct 3202 Query: 479 cttcgggaagctcttctttgccttctgggtgattgttcacttataccccttcctcaaggg 538 ||| || ||||| ||||| | |||||||| | | || | ||| | ||||||||||| Sbjct: 3203 ctttggaaagctgttcttctcgatctgggtgntcctccatctgtacacgttcctcaaggg 3262 Query: 539 tcttatgggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgtcctcctggc 598 ||| ||||| ||||| ||||||||||| || || ||||| |||||| | |||| || || Sbjct: 3263 tctcatgggaaggcagaaccgcacaccaacaatcgtcattgtctggtccatccttcttgc 3322 Query: 599 ttcaatcttctccttgctgtgggt 622 || |||||||||||||||||||| Sbjct: 3323 atctatcttctccttgctgtgggt 3346
>gb|AF419692.1| Uncultured bacterium C1_B022 16S ribosomal RNA gene, partial sequence Length = 1461 Score = 157 bits (79), Expect = 6e-35 Identities = 109/117 (93%), Gaps = 3/117 (2%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaa-gtggtgtttccag 59 |||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||| Sbjct: 19 ggatgaacgctggcggcatgsttaacacatgcaagtcggacgggaacgtggtgtttccas 78 Query: 60 tggcgaacgggtgagtaa-cgcgta-agaacctgcccttgggaggggaacaacaact 114 ||||| |||||||||||| |||||| || |||||||||||||||||||||||||||| Sbjct: 79 tggcggacgggtgagtaascgcgtacagmacctgcccttgggaggggaacaacaact 135
>gb|AY055724.2| Populus tremuloides cellulose synthase (CesA5) mRNA, complete cds Length = 3532 Score = 157 bits (79), Expect = 6e-35 Identities = 406/515 (78%) Strand = Plus / Plus Query: 126 tggttcattgctctcttcctttcaatttttgccaccggtatccttgagatgaggtggagt 185 ||||| ||| ||||||| ||||| || ||||| ||||||||| | ||||||||||||||| Sbjct: 2909 tggtttatttctctctttctttccatctttgcaaccggtatcttggagatgaggtggagt 2968 Query: 186 ggtgttggcattgacgagtggtggaggaatgaacagttctgggtcattggaggtatctct 245 |||||||| ||||| ||||||||||||||||||||||| |||||||| || ||| | || Sbjct: 2969 ggtgttgggattgatgagtggtggaggaatgaacagttttgggtcatcggtggtgtttca 3028 Query: 246 gcccatctgtttgccgtctttcagggtcttctgaaggtgcttgccggtatcgacaccaac 305 |||||||| ||||| || || || || | || || || ||||| || || ||||||||| Sbjct: 3029 gcccatctttttgctgttttccaaggcttgctcaaagtacttgctggcattgacaccaac 3088 Query: 306 ttcactgtcacctcaaaggctaatgacgaagaaggcgactttgctgagctctacatgttc 365 |||||||| || || ||||| ||||| || || || | |||||| || ||| ||||| Sbjct: 3089 ttcactgttacgtccaaggcatcagacgaggacggtgattctgctgaactatacttgttc 3148 Query: 366 aagtggacgacgcttctcatccctccgacgaccatcttgatcattaacatggtcggtgtc 425 || ||||| || || || ||||| || || || || | ||| ||||| |||| ||||| Sbjct: 3149 aaatggacaactctacttatcccgccaacaactctcctcatcgttaacttggtgggtgtt 3208 Query: 426 gttgctggtacctcctacgccatcaacagtggttaccaatcttgggggccgctcttcggg 485 ||||| || | ||| | || |||||||||||||| || || ||||| || ||||| || Sbjct: 3209 gttgccgggatatcccatgcaatcaacagtggttatcagtcatggggtccactctttggc 3268 Query: 486 aagctcttctttgccttctgggtgattgttcacttataccccttcctcaagggtcttatg 545 ||||| ||||| || ||||||||||| || || | || || ||||| || ||| | ||| Sbjct: 3269 aagcttttcttcgctttctgggtgatcgtccatctctatcctttcctaaaaggtttgatg 3328 Query: 546 ggcaggcaaaaccgcacaccgacgattgtcatcgtctgggctgtcctcctggcttcaatc 605 || | || ||||| ||||| || ||||| |||| ||| || | ||||| ||||||||| Sbjct: 3329 ggtcgccagaaccggacacccaccattgttgtcgtgtggtctattctccttgcttcaatc 3388 Query: 606 ttctccttgctgtgggttcgtgttgatccattcac 640 || |||||| ||||||| | |||||||| ||||| Sbjct: 3389 ttttccttgttgtgggtgagagttgatcccttcac 3423
>gb|DQ419727.1| Uncultured bacterium clone biogas-DT-b9 16S ribosomal RNA gene, partial sequence Length = 499 Score = 157 bits (79), Expect = 6e-35 Identities = 101/107 (94%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 6 aacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagtggcga 65 |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| || Sbjct: 27 aacgctggcggcatgcttgacacatgcaagtcgaacgggaagtggtgtatccagtggaga 86 Query: 66 acgggtgagt-aacgcgtaagaacctgcccttgggaggggaacaaca 111 ||| |||||| || ||||||||||||||||||||||||||||||||| Sbjct: 87 acgagtgagtaaatgcgtaagaacctgcccttgggaggggaacaaca 133
>emb|AJ401354.1|CEU401354 Cuscuta europaea chloroplast 16S rRNA gene Length = 1894 Score = 157 bits (79), Expect = 6e-35 Identities = 103/111 (92%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||| | ||||| ||||||||| | ||| Sbjct: 224 ggatgaacgctggcggcatgcttaacacatgcaagttgtacggggagtggtgttcctagt 283 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 284 ggcggacgggtgagtagtgcgtaagaacctgcccttgggaggggaacaaca 334
>dbj|AB032426.1| Beta vulgaris chloroplast DNA for 16S rRNA, tRNA-Val, ribosomal protein S12, ribosomal protein S7, NADH dehydrogenase ND2 subunit Length = 4147 Score = 157 bits (79), Expect = 6e-35 Identities = 85/87 (97%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 87 ggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaagtggtgtttccagt 28 Query: 61 ggcgaacgggtgagtaacgcgtaagaa 87 |||| |||||||||||||||||||||| Sbjct: 27 ggcggacgggtgagtaacgcgtaagaa 1
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 155 bits (78), Expect = 2e-34 Identities = 108/119 (90%), Gaps = 8/119 (6%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaag--------tggtg 52 |||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 119984 ggatgaacgctggcggcatgcttaacacatgcaagtcgtacgggaaggatcctagtggtg 119925 Query: 53 tttccagtggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 119924 tttccagtggcggacgggtgagtaacgcgtaagaacctgcccttgggagggggacaaca 119866 Score = 155 bits (78), Expect = 2e-34 Identities = 108/119 (90%), Gaps = 8/119 (6%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaag--------tggtg 52 |||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 82136 ggatgaacgctggcggcatgcttaacacatgcaagtcgtacgggaaggatcctagtggtg 82195 Query: 53 tttccagtggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 82196 tttccagtggcggacgggtgagtaacgcgtaagaacctgcccttgggagggggacaaca 82254
>gb|AY939471.1| Uncultured bacterium clone PORABL3B05 16S small subunit ribosomal RNA gene, partial sequence Length = 443 Score = 155 bits (78), Expect = 2e-34 Identities = 84/86 (97%) Strand = Plus / Plus Query: 26 cacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgtaag 85 ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 14 cacatgcaagtcgaacgggaagtggtgtttccagtggcggacgggtgaataacgcgtaag 73 Query: 86 aacctgcccttgggaggggaacaaca 111 |||||||||||||||||||||||||| Sbjct: 74 aacctgcccttgggaggggaacaaca 99
>gb|DQ221594.1| Uncultured bacterium clone BPH3C60003 16S ribosomal RNA gene, partial sequence Length = 437 Score = 153 bits (77), Expect = 9e-34 Identities = 86/89 (96%) Strand = Plus / Plus Query: 23 taacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgt 82 |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 7 taacacatgcaagtcggacggggagtggtgtttccagtggcggacgggtgagtaacgcgt 66 Query: 83 aagaacctgcccttgggaggggaacaaca 111 ||||||||||||||||||||||||||||| Sbjct: 67 aagaacctgcccttgggaggggaacaaca 95
>gb|DQ221592.1| Uncultured bacterium clone BPH3C60001 16S ribosomal RNA gene, partial sequence Length = 437 Score = 153 bits (77), Expect = 9e-34 Identities = 86/89 (96%) Strand = Plus / Plus Query: 23 taacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgt 82 |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 7 taacacatgcaagtcggacggggagtggtgtttccagtggcggacgggtgagtaacgcgt 66 Query: 83 aagaacctgcccttgggaggggaacaaca 111 ||||||||||||||||||||||||||||| Sbjct: 67 aagaacctgcccttgggaggggaacaaca 95
>gb|DQ221549.1| Uncultured bacterium clone BPH3C50007 16S ribosomal RNA gene, partial sequence Length = 439 Score = 153 bits (77), Expect = 9e-34 Identities = 86/89 (96%) Strand = Plus / Plus Query: 23 taacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgt 82 |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 7 taacacatgcaagtcggacggggagtggtgtttccagtggcggacgggtgagtaacgcgt 66 Query: 83 aagaacctgcccttgggaggggaacaaca 111 ||||||||||||||||||||||||||||| Sbjct: 67 aagaacctgcccttgggaggggaacaaca 95
>gb|DQ221548.1| Uncultured bacterium clone BPH3C50006 16S ribosomal RNA gene, partial sequence Length = 439 Score = 153 bits (77), Expect = 9e-34 Identities = 86/89 (96%) Strand = Plus / Plus Query: 23 taacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgt 82 |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 7 taacacatgcaagtcggacggggagtggtgtttccagtggcggacgggtgagtaacgcgt 66 Query: 83 aagaacctgcccttgggaggggaacaaca 111 ||||||||||||||||||||||||||||| Sbjct: 67 aagaacctgcccttgggaggggaacaaca 95
>gb|DQ221547.1| Uncultured bacterium clone BPH3C50005 16S ribosomal RNA gene, partial sequence Length = 440 Score = 153 bits (77), Expect = 9e-34 Identities = 86/89 (96%) Strand = Plus / Plus Query: 23 taacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgt 82 |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 7 taacacatgcaagtcggacggggagtggtgtttccagtggcggacgggtgagtaacgcgt 66 Query: 83 aagaacctgcccttgggaggggaacaaca 111 ||||||||||||||||||||||||||||| Sbjct: 67 aagaacctgcccttgggaggggaacaaca 95
>gb|DQ221546.1| Uncultured bacterium clone BPH3C50004 16S ribosomal RNA gene, partial sequence Length = 399 Score = 153 bits (77), Expect = 9e-34 Identities = 86/89 (96%) Strand = Plus / Plus Query: 23 taacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgt 82 |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 7 taacacatgcaagtcggacggggagtggtgtttccagtggcggacgggtgagtaacgcgt 66 Query: 83 aagaacctgcccttgggaggggaacaaca 111 ||||||||||||||||||||||||||||| Sbjct: 67 aagaacctgcccttgggaggggaacaaca 95
>gb|DQ221545.1| Uncultured bacterium clone BPH3C50003 16S ribosomal RNA gene, partial sequence Length = 439 Score = 153 bits (77), Expect = 9e-34 Identities = 86/89 (96%) Strand = Plus / Plus Query: 23 taacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgt 82 |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 7 taacacatgcaagtcggacggggagtggtgtttccagtggcggacgggtgagtaacgcgt 66 Query: 83 aagaacctgcccttgggaggggaacaaca 111 ||||||||||||||||||||||||||||| Sbjct: 67 aagaacctgcccttgggaggggaacaaca 95
>gb|DQ221544.1| Uncultured bacterium clone BPH3C50002 16S ribosomal RNA gene, partial sequence Length = 440 Score = 153 bits (77), Expect = 9e-34 Identities = 86/89 (96%) Strand = Plus / Plus Query: 23 taacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgt 82 |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 7 taacacatgcaagtcggacggggagtggtgtttccagtggcggacgggtgagtaacgcgt 66 Query: 83 aagaacctgcccttgggaggggaacaaca 111 ||||||||||||||||||||||||||||| Sbjct: 67 aagaacctgcccttgggaggggaacaaca 95
>gb|DQ221543.1| Uncultured bacterium clone BPH3C50001 16S ribosomal RNA gene, partial sequence Length = 400 Score = 153 bits (77), Expect = 9e-34 Identities = 86/89 (96%) Strand = Plus / Plus Query: 23 taacacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgt 82 |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 7 taacacatgcaagtcggacggggagtggtgtttccagtggcggacgggtgagtaacgcgt 66 Query: 83 aagaacctgcccttgggaggggaacaaca 111 ||||||||||||||||||||||||||||| Sbjct: 67 aagaacctgcccttgggaggggaacaaca 95
>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534A03 Length = 153170 Score = 151 bits (76), Expect = 3e-33 Identities = 85/88 (96%) Strand = Plus / Plus Query: 27 acatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgtaaga 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139806 acatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgtaaga 139865 Query: 87 acctgcccttgggaggggaacaacaact 114 |||| |||||||||| |||| ||||||| Sbjct: 139866 acctacccttgggagaggaaaaacaact 139893
>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041B22 Length = 142446 Score = 151 bits (76), Expect = 3e-33 Identities = 85/88 (96%) Strand = Plus / Plus Query: 27 acatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgtaaga 86 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36299 acatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgtaaga 36358 Query: 87 acctgcccttgggaggggaacaacaact 114 |||| |||||||||| |||| ||||||| Sbjct: 36359 acctacccttgggagaggaaaaacaact 36386
>emb|X73670.1|CHDC16SRR D.carota chloroplast gene for tRNA-Val, 16S rRNA and tRNA-Ile (exon 1) Length = 2192 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaagtggtgtttccagt 60 |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 328 ggatgaacgctggcggcatggaaaacacatgcaagtcggacgggaagtggtgtttccagt 387 Query: 61 ggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||| ||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 388 ggcggacgggactgtaacgcgtaagaacctgcccttgggtggggaacaaca 438
>gb|AY957763.1| Uncultured bacterium clone P2HE06 16S small subunit ribosomal RNA gene, partial sequence Length = 440 Score = 147 bits (74), Expect = 5e-32 Identities = 87/90 (96%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 25 acacatgcaagtcgaacgggaagtggtgtttccagtggcgaacgggtgagtaacgcgtaa 84 ||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 11 acacatgca-gtcggacgggaagtggtgtttccagtggcggacgggtgagtaacgcgtaa 69 Query: 85 gaacctgcccttgggaggggaacaacaact 114 |||||||||||||||||||||||||||||| Sbjct: 70 gaacctgcccttgggaggggaacaacaact 99
>dbj|AB087477.1| Anthoceros formosae chloroplast 16S rRNA, complete sequence Length = 1614 Score = 147 bits (74), Expect = 5e-32 Identities = 107/119 (89%), Gaps = 8/119 (6%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaag--------tggtg 52 ||||||||||||||||||||| |||||||||||||||| |||||||| ||||| Sbjct: 36 ggatgaacgctggcggcatgcctaacacatgcaagtcggacgggaagcatcctagtggtg 95 Query: 53 tttccagtggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 96 tttccagtggcggacgggtgagtaacgcgtaagaacctgcccttgggagggggacaaca 154
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 147 bits (74), Expect = 5e-32 Identities = 107/119 (89%), Gaps = 8/119 (6%) Strand = Plus / Minus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaag--------tggtg 52 ||||||||||||||||||||| |||||||||||||||| |||||||| ||||| Sbjct: 155138 ggatgaacgctggcggcatgcctaacacatgcaagtcggacgggaagcatcctagtggtg 155079 Query: 53 tttccagtggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 155078 tttccagtggcggacgggtgagtaacgcgtaagaacctgcccttgggagggggacaaca 155020 Score = 147 bits (74), Expect = 5e-32 Identities = 107/119 (89%), Gaps = 8/119 (6%) Strand = Plus / Plus Query: 1 ggatgaacgctggcggcatgcttaacacatgcaagtcgaacgggaag--------tggtg 52 ||||||||||||||||||||| |||||||||||||||| |||||||| ||||| Sbjct: 113528 ggatgaacgctggcggcatgcctaacacatgcaagtcggacgggaagcatcctagtggtg 113587 Query: 53 tttccagtggcgaacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaaca 111 |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 113588 tttccagtggcggacgggtgagtaacgcgtaagaacctgcccttgggagggggacaaca 113646 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,362,967 Number of Sequences: 3902068 Number of extensions: 5362967 Number of successful extensions: 354078 Number of sequences better than 10.0: 127119 Number of HSP's better than 10.0 without gapping: 126178 Number of HSP's successfully gapped in prelim test: 968 Number of HSP's that attempted gapping in prelim test: 126977 Number of HSP's gapped (non-prelim): 226873 length of query: 656 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 633 effective length of database: 17,143,297,704 effective search space: 10851707446632 effective search space used: 10851707446632 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
