>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  101 bits (51), Expect = 3e-18
 Identities = 129/155 (83%)
 Strand = Plus / Plus

                                                                            
Query: 419      ttgcctttgatgtatcgatattcaaactttggcggtggatatttcctatttaacttttcg 478
                ||||||||||||  |||||||||  | ||||| |||||||||||| | ||||| ||| | 
Sbjct: 31820352 ttgcctttgatgcgtcgatattcccattttggtggtggatatttcttctttaattttaca 31820411

                                                                            
Query: 479      tatttgtccaacatctctagcttcataaatacatcaccaagcatcctgacaatcgaggta 538
                ||||||||||||||| ||| ||||   ||||| ||||||||||| |||| ||||||    
Sbjct: 31820412 tatttgtccaacatccctaacttctggaatacctcaccaagcattctgataatcgaaccg 31820471

                                                   
Query: 539      tcaggtcgaacacccagttcttccatatcagcaaa 573
                ||||||| ||||||||| || ||||||||||||||
Sbjct: 31820472 tcaggtctaacacccagctcctccatatcagcaaa 31820506



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                            
Query: 222      aagctctgagctatacaaattcaacgtctccagaagcagcatcgcctaatacattcctgt 281
                ||||||||| ||| |||||||||| ||||||| |||| || ||| | |||||||||||||
Sbjct: 31820158 aagctctgaactacacaaattcaaggtctccacaagctgcttcgtccaatacattcctgt 31820217

                      
Query: 282      ccaggc 287
                ||||||
Sbjct: 31820218 ccaggc 31820223

>dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1131G08
          Length = 158241

 Score =  101 bits (51), Expect = 3e-18
 Identities = 129/155 (83%)
 Strand = Plus / Plus

                                                                        
Query: 419  ttgcctttgatgtatcgatattcaaactttggcggtggatatttcctatttaacttttcg 478
            ||||||||||||  |||||||||  | ||||| |||||||||||| | ||||| ||| | 
Sbjct: 6430 ttgcctttgatgcgtcgatattcccattttggtggtggatatttcttctttaattttaca 6489

                                                                        
Query: 479  tatttgtccaacatctctagcttcataaatacatcaccaagcatcctgacaatcgaggta 538
            ||||||||||||||| ||| ||||   ||||| ||||||||||| |||| ||||||    
Sbjct: 6490 tatttgtccaacatccctaacttctggaatacctcaccaagcattctgataatcgaaccg 6549

                                               
Query: 539  tcaggtcgaacacccagttcttccatatcagcaaa 573
            ||||||| ||||||||| || ||||||||||||||
Sbjct: 6550 tcaggtctaacacccagctcctccatatcagcaaa 6584



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                        
Query: 222  aagctctgagctatacaaattcaacgtctccagaagcagcatcgcctaatacattcctgt 281
            ||||||||| ||| |||||||||| ||||||| |||| || ||| | |||||||||||||
Sbjct: 6236 aagctctgaactacacaaattcaaggtctccacaagctgcttcgtccaatacattcctgt 6295

                  
Query: 282  ccaggc 287
            ||||||
Sbjct: 6296 ccaggc 6301

>dbj|AP003375.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1414_E05
          Length = 105222

 Score =  101 bits (51), Expect = 3e-18
 Identities = 129/155 (83%)
 Strand = Plus / Plus

                                                                         
Query: 419   ttgcctttgatgtatcgatattcaaactttggcggtggatatttcctatttaacttttcg 478
             ||||||||||||  |||||||||  | ||||| |||||||||||| | ||||| ||| | 
Sbjct: 98390 ttgcctttgatgcgtcgatattcccattttggtggtggatatttcttctttaattttaca 98449

                                                                         
Query: 479   tatttgtccaacatctctagcttcataaatacatcaccaagcatcctgacaatcgaggta 538
             ||||||||||||||| ||| ||||   ||||| ||||||||||| |||| ||||||    
Sbjct: 98450 tatttgtccaacatccctaacttctggaatacctcaccaagcattctgataatcgaaccg 98509

                                                
Query: 539   tcaggtcgaacacccagttcttccatatcagcaaa 573
             ||||||| ||||||||| || ||||||||||||||
Sbjct: 98510 tcaggtctaacacccagctcctccatatcagcaaa 98544



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                         
Query: 222   aagctctgagctatacaaattcaacgtctccagaagcagcatcgcctaatacattcctgt 281
             ||||||||| ||| |||||||||| ||||||| |||| || ||| | |||||||||||||
Sbjct: 98196 aagctctgaactacacaaattcaaggtctccacaagctgcttcgtccaatacattcctgt 98255

                   
Query: 282   ccaggc 287
             ||||||
Sbjct: 98256 ccaggc 98261

>dbj|AK102734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106B06, full
            insert sequence
          Length = 2682

 Score =  101 bits (51), Expect = 3e-18
 Identities = 129/155 (83%)
 Strand = Plus / Minus

                                                                        
Query: 419  ttgcctttgatgtatcgatattcaaactttggcggtggatatttcctatttaacttttcg 478
            ||||||||||||  |||||||||  | ||||| |||||||||||| | ||||| ||| | 
Sbjct: 2227 ttgcctttgatgcgtcgatattcccattttggtggtggatatttcttctttaattttaca 2168

                                                                        
Query: 479  tatttgtccaacatctctagcttcataaatacatcaccaagcatcctgacaatcgaggta 538
            ||||||||||||||| ||| ||||   ||||| ||||||||||| |||| ||||||    
Sbjct: 2167 tatttgtccaacatccctaacttctggaatacctcaccaagcattctgataatcgaaccg 2108

                                               
Query: 539  tcaggtcgaacacccagttcttccatatcagcaaa 573
            ||||||| ||||||||| || ||||||||||||||
Sbjct: 2107 tcaggtctaacacccagctcctccatatcagcaaa 2073



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                        
Query: 222  aagctctgagctatacaaattcaacgtctccagaagcagcatcgcctaatacattcctgt 281
            ||||||||| ||| |||||||||| ||||||| |||| || ||| | |||||||||||||
Sbjct: 2421 aagctctgaactacacaaattcaaggtctccacaagctgcttcgtccaatacattcctgt 2362

                  
Query: 282  ccaggc 287
            ||||||
Sbjct: 2361 ccaggc 2356

>gb|AY112333.1| Zea mays CL9751_1 mRNA sequence
          Length = 524

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 93/112 (83%)
 Strand = Plus / Plus

                                                                       
Query: 416 cgcttgcctttgatgtatcgatattcaaactttggcggtggatatttcctatttaacttt 475
           ||||||||||||||||||||||||||  | || || || || ||||||      ||||||
Sbjct: 309 cgcttgcctttgatgtatcgatattcccatttcggnggngggtatttcnnnnnnaacttt 368

                                                               
Query: 476 tcgtatttgtccaacatctctagcttcataaatacatcaccaagcatcctga 527
           ||||||||||||| |||||||| |||   |||||||||||| ||||||||||
Sbjct: 369 tcgtatttgtccatcatctctatcttttgaaatacatcacctagcatcctga 420

>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence
          Length = 1400893

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 220    tcaagctctgagctatacaaat 241
              ||||||||||||||||||||||
Sbjct: 701320 tcaagctctgagctatacaaat 701341

>emb|AL671981.12| Mouse DNA sequence from clone RP23-358P8 on chromosome X, complete
             sequence
          Length = 167604

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 458   tatttcctatttaacttttcgtattt 483
             ||||||||||||||||||| ||||||
Sbjct: 44086 tatttcctatttaacttttggtattt 44111

>gb|AC161442.5| Mus musculus chromosome 5, clone RP23-384P12, complete sequence
          Length = 174557

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 418    cttgcctttgatgtatcgatattca 442
              |||||||||||||||| ||||||||
Sbjct: 105350 cttgcctttgatgtatagatattca 105326

>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 363    ttctttgtgttacctcttca 382
              ||||||||||||||||||||
Sbjct: 517537 ttctttgtgttacctcttca 517518

>gb|AC127028.18| Mus musculus chromosome 18, clone RP23-345J21, complete sequence
          Length = 191473

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 575   acctcaaacatcttctcgta 594
             ||||||||||||||||||||
Sbjct: 79097 acctcaaacatcttctcgta 79078

>gb|AC113095.14| Mus musculus chromosome 9, clone RP23-311A1, complete sequence
          Length = 205429

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 509    acatcaccaagcatcctgac 528
              ||||||||||||||||||||
Sbjct: 105097 acatcaccaagcatcctgac 105116

>gb|AC084387.1| Mus musculus BAC clone RP23-93H2 from 7, complete sequence
          Length = 175948

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    gaagcaccaaattcaagctc 227
              ||||||||||||||||||||
Sbjct: 113694 gaagcaccaaattcaagctc 113675

>emb|AL138882.8| Human DNA sequence from clone RP1-195K21 on chromosome 6 Contains part
             of the KHDRBS2 gene for KH domain containing RNA binding
             signal transduction associated protein 2, complete
             sequence
          Length = 75512

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 556   ttcttccatatcagcaaaaa 575
             ||||||||||||||||||||
Sbjct: 44977 ttcttccatatcagcaaaaa 44996

>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01,
             complete sequence
          Length = 133331

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   tctgaactgctagattacat 168
             ||||||||||||||||||||
Sbjct: 28457 tctgaactgctagattacat 28476

>gb|AC093301.3| Homo sapiens chromosome 5 clone RP11-565F4, complete sequence
          Length = 178545

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   acactgctttcatggagcag 203
             ||||||||||||||||||||
Sbjct: 89937 acactgctttcatggagcag 89918

>dbj|AK139014.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
           enriched library, clone:A530067P14 product:hypothetical
           protein, full insert sequence
          Length = 1892

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 575 acctcaaacatcttctcgta 594
           ||||||||||||||||||||
Sbjct: 884 acctcaaacatcttctcgta 865

>gb|AC068304.33| Homo sapiens 12 BAC RP11-515A6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 155413

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 556   ttcttccatatcagcaaaaa 575
             ||||||||||||||||||||
Sbjct: 90246 ttcttccatatcagcaaaaa 90265

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 149      tctgaactgctagattacat 168
                ||||||||||||||||||||
Sbjct: 34722895 tctgaactgctagattacat 34722914

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 165      acatagaacatgtcgcagca 184
                ||||||||||||||||||||
Sbjct: 21545853 acatagaacatgtcgcagca 21545872

>gb|AC073875.6| Homo sapiens BAC clone RP11-594C24 from 2, complete sequence
          Length = 145028

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    tctccattcccaaatttggt 135
              ||||||||||||||||||||
Sbjct: 105640 tctccattcccaaatttggt 105659

>gb|AC007446.8|AC007446 Homo sapiens, clone hRPK.67_A_1, complete sequence
          Length = 177471

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 556   ttcttccatatcagcaaaaa 575
             ||||||||||||||||||||
Sbjct: 54987 ttcttccatatcagcaaaaa 54968

>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete
             sequence
          Length = 103264

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   tctgaactgctagattacat 168
             ||||||||||||||||||||
Sbjct: 65915 tctgaactgctagattacat 65934

>gb|AC113018.7| Mus musculus chromosome 5, clone RP23-183C18, complete sequence
          Length = 215671

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 489   acatctctagcttcataaat 508
             ||||||||||||||||||||
Sbjct: 33493 acatctctagcttcataaat 33474

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 165      acatagaacatgtcgcagca 184
                ||||||||||||||||||||
Sbjct: 21474174 acatagaacatgtcgcagca 21474193

>emb|AL844497.4|CNS08CAU Oryza sativa chromosome 12, . BAC OSJNBa0085B23 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 158019

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    acatagaacatgtcgcagca 184
              ||||||||||||||||||||
Sbjct: 100036 acatagaacatgtcgcagca 100017

>gb|AC158570.5| Mus musculus chromosome 7, clone RP24-62O14, complete sequence
          Length = 184623

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    gaagcaccaaattcaagctc 227
              ||||||||||||||||||||
Sbjct: 139188 gaagcaccaaattcaagctc 139207

>gb|AF418088.1| Leucaena confertiflora var. confertiflora clone a internal
           transcribed spacer 1, partial sequence; 5.8S ribosomal
           RNA gene, complete sequence; and internal transcribed
           spacer 2, partial sequence
          Length = 526

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  tgcatccaaaatgactcttg 54
           ||||||||||||||||||||
Sbjct: 164 tgcatccaaaatgactcttg 183


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,515,315
Number of Sequences: 3902068
Number of extensions: 5515315
Number of successful extensions: 101264
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101057
Number of HSP's gapped (non-prelim): 202
length of query: 641
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 618
effective length of database: 17,143,297,704
effective search space: 10594557981072
effective search space used: 10594557981072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)