ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd21o20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY245454.1| Hordeum vulgare subsp. vulgare thioredoxin h isoform 1 mRNA, complete cds Length = 357 Score = 708 bits (357), Expect = 0.0 Identities = 357/357 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgatacccac 110 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgatacccac 60 Query: 111 atggccaatggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtgc 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atggccaatggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtgc 120 Query: 171 ggtccatgtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggcc 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggtccatgtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggcc 180 Query: 231 atcttcctgaaggtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttgag 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 atcttcctgaaggtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttgag 240 Query: 291 gcaatgccgaccttcctgtttatcaaggacggtgagaaggtggacagtgttgtcggtggc 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gcaatgccgaccttcctgtttatcaaggacggtgagaaggtggacagtgttgtcggtggc 300 Query: 351 aggaaggatgacatccataccaagatagtggccctcatgggttctgcatccacctaa 407 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 aggaaggatgacatccataccaagatagtggccctcatgggttctgcatccacctaa 357
>gb|AY072771.1| Triticum aestivum cultivar Soissons thioredoxin H mRNA, complete cds Length = 598 Score = 607 bits (306), Expect = e-170 Identities = 389/416 (93%), Gaps = 3/416 (0%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgatacccac 110 ||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| Sbjct: 1 atggccgccgaggagggagccgtgatagcgtgccacaccaagcaagagttcgacacccac 60 Query: 111 atggccaatggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtgc 170 ||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 61 atggctaatggcaaggagaccggcaagctggtgatcattgacttcactgcttcctggtgc 120 Query: 171 ggtccatgtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggcc 230 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 121 ggtccttgtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggcgcc 180 Query: 231 atcttcctgaaggtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttgag 290 || |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 181 attttcctgaaggtggacgttgacgagctgaaggacgtcgctgaagcatacaacgttgag 240 Query: 291 gcaatgccgaccttcctgtttatcaaggacggtgagaaggtggacagtgttgtcggtggc 350 ||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||| Sbjct: 241 gcaatgccgaccttcctgtttatcaaggatggtgcgaaggtggacactgttgtcggtggc 300 Query: 351 aggaaggatgacatccataccaagatagtggccctcatgggttctgcatccacct---aa 407 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 301 aggaaggatgatatccataccaagatagtggccctcatgggttctgcatctgcctaagaa 360 Query: 408 gggaagagtgattgcccggttatatcaataagagccagcacctggtgtaagtagtt 463 |||||||||||| ||| || | |||||||||||||||||||||||||||||||| Sbjct: 361 gggaagagtgatgcccctcttgtgtcaataagagccagcacctggtgtaagtagtt 416 Score = 93.7 bits (47), Expect = 7e-16 Identities = 106/121 (87%), Gaps = 6/121 (4%) Strand = Plus / Plus Query: 459 tagttgtgactgaactttatgttgattcattttagagttcaga-cttaagatat--gcac 515 |||| ||||||||||||| || |||||| ||||||||||||| ||| ||| || |||| Sbjct: 439 tagtcgtgactgaactttgtgatgattcggtttagagttcagaacttcagacatttgcac 498 Query: 516 cggttgttctgaattacagtgcctaatg-tttgctacagttgct--attgtgaagtttgg 572 |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||| Sbjct: 499 cggttgttctgaattacagtacctaatgttttgctacagttgcttcgttgtgaagtttgg 558 Query: 573 a 573 | Sbjct: 559 a 559
>ref|XM_476912.1| Oryza sativa (japonica cultivar-group), mRNA Length = 600 Score = 204 bits (103), Expect = 2e-49 Identities = 232/275 (84%) Strand = Plus / Plus Query: 50 aatggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgataccca 109 |||||||||||||||||||| ||| ||||| ||||||| |||| | |||||||| |||| Sbjct: 93 aatggccgccgaggagggagtcgtgatcgcctgccacaacaaggacgagttcgacgccca 152 Query: 110 catggccaatggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtg 169 ||| |||| | |||||| ||||||| |||| || ||||| ||||||||||||||||| Sbjct: 153 gatgaccaaggccaaggaggccggcaaagtggtcataattgacttcactgcttcctggtg 212 Query: 170 cggtccatgtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggc 229 || || || || |||| |||||||| || ||||| |||||||| ||||||||||| || Sbjct: 213 tggcccttgccgcttcatcgccccagtgttcgctgaatacgccaaaaagttccctggtgc 272 Query: 230 catcttcctgaaggtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttga 289 ||||||||||||| |||||||||||||||||||| || |||||| |||||||| || Sbjct: 273 tgtcttcctgaaggttgatgttgatgagctgaaggaagttgctgaaaagtacaatgtcga 332 Query: 290 ggcaatgccgaccttcctgtttatcaaggacggtg 324 |||||||||||||||||| || |||||||| |||| Sbjct: 333 ggcaatgccgaccttcctattcatcaaggatggtg 367
>dbj|AK121423.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133N23, full insert sequence Length = 733 Score = 204 bits (103), Expect = 2e-49 Identities = 232/275 (84%) Strand = Plus / Plus Query: 50 aatggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgataccca 109 |||||||||||||||||||| ||| ||||| ||||||| |||| | |||||||| |||| Sbjct: 94 aatggccgccgaggagggagtcgtgatcgcctgccacaacaaggacgagttcgacgccca 153 Query: 110 catggccaatggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtg 169 ||| |||| | |||||| ||||||| |||| || ||||| ||||||||||||||||| Sbjct: 154 gatgaccaaggccaaggaggccggcaaagtggtcataattgacttcactgcttcctggtg 213 Query: 170 cggtccatgtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggc 229 || || || || |||| |||||||| || ||||| |||||||| ||||||||||| || Sbjct: 214 tggcccttgccgcttcatcgccccagtgttcgctgaatacgccaaaaagttccctggtgc 273 Query: 230 catcttcctgaaggtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttga 289 ||||||||||||| |||||||||||||||||||| || |||||| |||||||| || Sbjct: 274 tgtcttcctgaaggttgatgttgatgagctgaaggaagttgctgaaaagtacaatgtcga 333 Query: 290 ggcaatgccgaccttcctgtttatcaaggacggtg 324 |||||||||||||||||| || |||||||| |||| Sbjct: 334 ggcaatgccgaccttcctattcatcaaggatggtg 368
>dbj|AK059196.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A03, full insert sequence Length = 600 Score = 204 bits (103), Expect = 2e-49 Identities = 232/275 (84%) Strand = Plus / Plus Query: 50 aatggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgataccca 109 |||||||||||||||||||| ||| ||||| ||||||| |||| | |||||||| |||| Sbjct: 93 aatggccgccgaggagggagtcgtgatcgcctgccacaacaaggacgagttcgacgccca 152 Query: 110 catggccaatggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtg 169 ||| |||| | |||||| ||||||| |||| || ||||| ||||||||||||||||| Sbjct: 153 gatgaccaaggccaaggaggccggcaaagtggtcataattgacttcactgcttcctggtg 212 Query: 170 cggtccatgtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggc 229 || || || || |||| |||||||| || ||||| |||||||| ||||||||||| || Sbjct: 213 tggcccttgccgcttcatcgccccagtgttcgctgaatacgccaaaaagttccctggtgc 272 Query: 230 catcttcctgaaggtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttga 289 ||||||||||||| |||||||||||||||||||| || |||||| |||||||| || Sbjct: 273 tgtcttcctgaaggttgatgttgatgagctgaaggaagttgctgaaaagtacaatgtcga 332 Query: 290 ggcaatgccgaccttcctgtttatcaaggacggtg 324 |||||||||||||||||| || |||||||| |||| Sbjct: 333 ggcaatgccgaccttcctattcatcaaggatggtg 367
>dbj|D21836.1|RICTH Oryza sativa (japonica cultivar-group) mRNA for thioredoxin h, complete cds Length = 687 Score = 204 bits (103), Expect = 2e-49 Identities = 232/275 (84%) Strand = Plus / Plus Query: 50 aatggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgataccca 109 |||||||||||||||||||| ||| ||||| ||||||| |||| | |||||||| |||| Sbjct: 56 aatggccgccgaggagggagtcgtgatcgcctgccacaacaaggacgagttcgacgccca 115 Query: 110 catggccaatggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtg 169 ||| |||| | |||||| ||||||| |||| || ||||| ||||||||||||||||| Sbjct: 116 gatgaccaaggccaaggaggccggcaaagtggtcataattgacttcactgcttcctggtg 175 Query: 170 cggtccatgtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggc 229 || || || || |||| |||||||| || ||||| |||||||| ||||||||||| || Sbjct: 176 tggcccttgccgcttcatcgccccagtgttcgctgaatacgccaaaaagttccctggtgc 235 Query: 230 catcttcctgaaggtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttga 289 ||||||||||||| |||||||||||||||||||| || |||||| |||||||| || Sbjct: 236 tgtcttcctgaaggttgatgttgatgagctgaaggaagttgctgaaaagtacaatgtcga 295 Query: 290 ggcaatgccgaccttcctgtttatcaaggacggtg 324 |||||||||||||||||| || |||||||| |||| Sbjct: 296 ggcaatgccgaccttcctattcatcaaggatggtg 330
>gb|U92541.1|OSU92541 Oryza sativa thioredoxin h mRNA, complete cds Length = 601 Score = 204 bits (103), Expect = 2e-49 Identities = 232/275 (84%) Strand = Plus / Plus Query: 50 aatggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgataccca 109 |||||||||||||||||||| ||| ||||| ||||||| |||| | |||||||| |||| Sbjct: 85 aatggccgccgaggagggagtcgtgatcgcctgccacaacaaggacgagttcgacgccca 144 Query: 110 catggccaatggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtg 169 ||| |||| | |||||| ||||||| |||| || ||||| ||||||||||||||||| Sbjct: 145 gatgaccaaggccaaggaggccggcaaagtggtcataattgacttcactgcttcctggtg 204 Query: 170 cggtccatgtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggc 229 || || || || |||| |||||||| || ||||| |||||||| ||||||||||| || Sbjct: 205 tggcccttgccgcttcatcgccccagtgttcgctgaatacgccaaaaagttccctggtgc 264 Query: 230 catcttcctgaaggtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttga 289 ||||||||||||| |||||||||||||||||||| || |||||| |||||||| || Sbjct: 265 tgtcttcctgaaggttgatgttgatgagctgaaggaagttgctgaaaagtacaatgtcga 324 Query: 290 ggcaatgccgaccttcctgtttatcaaggacggtg 324 |||||||||||||||||| || |||||||| |||| Sbjct: 325 ggcaatgccgaccttcctattcatcaaggatggtg 359
>dbj|D21310.1|RICSS396 Oryza sativa SS396 mRNA for thioredoxin, partial sequence Length = 320 Score = 151 bits (76), Expect = 3e-33 Identities = 148/172 (86%) Strand = Plus / Plus Query: 153 ttcactgcttcctggtgcggtccatgtcgtgtcatagccccagtctttgctgagtacgcc 212 ||||||||||||||||| || || || || |||| |||||||| || ||||| |||||| Sbjct: 21 ttcactgcttcctggtgtggcccttgccgcttcatcgccccagtgttcgctgaatacgcc 80 Query: 213 aagaagttccctggggccatcttcctgaaggtggatgttgatgagctgaaggacgtcgct 272 || ||||||||||| || ||||||||||||| |||||||||||||||||||| || ||| Sbjct: 81 aaaaagttccctggtgctgtcttcctgaaggttgatgttgatgagctgaaggaagttgct 140 Query: 273 gaagcatacaatgttgaggcaatgccgaccttcctgtttatcaaggacggtg 324 ||| |||||||| |||||||||||||||||||| || |||||||| |||| Sbjct: 141 gaaaagtacaatgtcgaggcaatgccgaccttcctattcatcaaggatggtg 192
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 147 attgatttcactgcttcctggtgcggtccatgtcgtgtcatagccccagtctttgctgag 206 ||||| ||||||||||||||||| || || || || |||| |||||||| || ||||| Sbjct: 4607092 attgacttcactgcttcctggtgtggcccttgccgcttcatcgccccagtgttcgctgaa 4607033 Query: 207 tacgccaagaagttccctggggccatcttcctgaaggtggatgttgatgagctgaagg 264 |||||||| ||||||||||| || ||||||||||||| ||||||||||||||||||| Sbjct: 4607032 tacgccaaaaagttccctggtgctgtcttcctgaaggttgatgttgatgagctgaagg 4606975 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 50 aatggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgataccca 109 |||||||||||||||||||| ||| ||||| ||||||| |||| | |||||||| |||| Sbjct: 4608289 aatggccgccgaggagggagtcgtgatcgcctgccacaacaaggacgagttcgacgccca 4608230 Query: 110 catggccaatggcaaggacaccggcaa 136 ||| |||| | |||||| ||||||| Sbjct: 4608229 gatgaccaaggccaaggaggccggcaa 4608203 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 279 tacaatgttgaggcaatgccgaccttcctgtttatcaaggacggtg 324 |||||||| |||||||||||||||||||| || |||||||| |||| Sbjct: 4606879 tacaatgtcgaggcaatgccgaccttcctattcatcaaggatggtg 4606834
>dbj|AP003753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_B08 Length = 119212 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 147 attgatttcactgcttcctggtgcggtccatgtcgtgtcatagccccagtctttgctgag 206 ||||| ||||||||||||||||| || || || || |||| |||||||| || ||||| Sbjct: 72432 attgacttcactgcttcctggtgtggcccttgccgcttcatcgccccagtgttcgctgaa 72373 Query: 207 tacgccaagaagttccctggggccatcttcctgaaggtggatgttgatgagctgaagg 264 |||||||| ||||||||||| || ||||||||||||| ||||||||||||||||||| Sbjct: 72372 tacgccaaaaagttccctggtgctgtcttcctgaaggttgatgttgatgagctgaagg 72315 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 50 aatggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgataccca 109 |||||||||||||||||||| ||| ||||| ||||||| |||| | |||||||| |||| Sbjct: 73629 aatggccgccgaggagggagtcgtgatcgcctgccacaacaaggacgagttcgacgccca 73570 Query: 110 catggccaatggcaaggacaccggcaa 136 ||| |||| | |||||| ||||||| Sbjct: 73569 gatgaccaaggccaaggaggccggcaa 73543 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 279 tacaatgttgaggcaatgccgaccttcctgtttatcaaggacggtg 324 |||||||| |||||||||||||||||||| || |||||||| |||| Sbjct: 72219 tacaatgtcgaggcaatgccgaccttcctattcatcaaggatggtg 72174
>dbj|AP004384.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506C07 Length = 123451 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 147 attgatttcactgcttcctggtgcggtccatgtcgtgtcatagccccagtctttgctgag 206 ||||| ||||||||||||||||| || || || || |||| |||||||| || ||||| Sbjct: 14465 attgacttcactgcttcctggtgtggcccttgccgcttcatcgccccagtgttcgctgaa 14406 Query: 207 tacgccaagaagttccctggggccatcttcctgaaggtggatgttgatgagctgaagg 264 |||||||| ||||||||||| || ||||||||||||| ||||||||||||||||||| Sbjct: 14405 tacgccaaaaagttccctggtgctgtcttcctgaaggttgatgttgatgagctgaagg 14348 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 50 aatggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgataccca 109 |||||||||||||||||||| ||| ||||| ||||||| |||| | |||||||| |||| Sbjct: 15662 aatggccgccgaggagggagtcgtgatcgcctgccacaacaaggacgagttcgacgccca 15603 Query: 110 catggccaatggcaaggacaccggcaa 136 ||| |||| | |||||| ||||||| Sbjct: 15602 gatgaccaaggccaaggaggccggcaa 15576 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 279 tacaatgttgaggcaatgccgaccttcctgtttatcaaggacggtg 324 |||||||| |||||||||||||||||||| || |||||||| |||| Sbjct: 14252 tacaatgtcgaggcaatgccgaccttcctattcatcaaggatggtg 14207
>dbj|D26547.1|RICRTH Oryza sativa gene for thioredoxin h, complete cds Length = 2906 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Plus Query: 147 attgatttcactgcttcctggtgcggtccatgtcgtgtcatagccccagtctttgctgag 206 ||||| ||||||||||||||||| || || || || |||| |||||||| || ||||| Sbjct: 2217 attgacttcactgcttcctggtgtggcccttgccgcttcatcgccccagtgttcgctgaa 2276 Query: 207 tacgccaagaagttccctggggccatcttcctgaaggtggatgttgatgagctgaagg 264 |||||||| ||||||||||| || ||||||||||||| ||||||||||||||||||| Sbjct: 2277 tacgccaaaaagttccctggtgctgtcttcctgaaggttgatgttgatgagctgaagg 2334 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 50 aatggccgccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgataccca 109 |||||||||||||||||||| ||| ||||| ||||||| |||| | |||||||| |||| Sbjct: 1025 aatggccgccgaggagggagtcgtgatcgcctgccacaacaaggacgagttcgacgccca 1084 Query: 110 catggccaatggcaaggacaccggcaa 136 ||| |||| | |||||| ||||||| Sbjct: 1085 gatgaccaaggccaaggaggccggcaa 1111 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 279 tacaatgttgaggcaatgccgaccttcctgtttatcaaggacggtg 324 |||||||| |||||||||||||||||||| || |||||||| |||| Sbjct: 2430 tacaatgtcgaggcaatgccgaccttcctattcatcaaggatggtg 2475
>gb|AY104876.1| Zea mays PCO064560 mRNA sequence Length = 756 Score = 91.7 bits (46), Expect = 3e-15 Identities = 154/190 (81%) Strand = Plus / Plus Query: 58 ccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgatacccacatggcca 117 ||||| |||||| ||| ||||||||||||| |||| ||||| || |||||||| ||| Sbjct: 119 ccgagcagggagtcgtgatcgcgtgccacagcaaggctgagtttgacgcccacatgacca 178 Query: 118 atggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtgcggtccat 177 | | | |||| |||||||||||||| ||||||| |||||||| ||||||||||||||| Sbjct: 179 aggcccaggaagccggcaagctggtggtcattgacttcactgccgcctggtgcggtccat 238 Query: 178 gtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggccatcttcc 237 | || | ||| |||||| | || | || |||||||||||||| || || | |||||| Sbjct: 239 gccgcgccatcgccccactgttcgtcgaacacgccaagaagttcactcaggtcgtcttcc 298 Query: 238 tgaaggtgga 247 |||||||||| Sbjct: 299 tgaaggtgga 308
>gb|BT017986.1| Zea mays clone EL01N0525F08.c mRNA sequence Length = 687 Score = 75.8 bits (38), Expect = 2e-10 Identities = 152/190 (80%) Strand = Plus / Plus Query: 58 ccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgatacccacatggcca 117 ||||| |||||| ||| ||||||||||||| |||| ||||| || ||||||| ||| Sbjct: 63 ccgagcagggagtcgtgatcgcgtgccacagcaaggctgagtttgacgcccacattacca 122 Query: 118 atggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtgcggtccat 177 | | | |||| |||||||||||||| ||||||| |||||||| ||||||||||||||| Sbjct: 123 aggcccaggaagccggcaagctggtggtcattgacttcactgccgcctggtgcggtccat 182 Query: 178 gtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggccatcttcc 237 | || | ||| |||||| | || | || |||||||||||||| || || | | |||| Sbjct: 183 gccgcgccatcgccccactgttcgtcgaacacgccaagaagttcactcaggtcgtgttcc 242 Query: 238 tgaaggtgga 247 |||||||||| Sbjct: 243 tgaaggtgga 252
>emb|AJ890021.1| Zea mays mRNA for thioredoxin h2 protein (trxh2 gene), cultivar A69Y, from endosperm tissue Length = 556 Score = 75.8 bits (38), Expect = 2e-10 Identities = 152/190 (80%) Strand = Plus / Plus Query: 58 ccgaggagggagccgttatcgcgtgccacaccaagcaagagttcgatacccacatggcca 117 ||||| |||||| ||| ||||||||||||| |||| ||||| || |||||||| ||| Sbjct: 8 ccgagcagggagtcgtgatcgcgtgccacagcaaggctgagtttgacgcccacatgacca 67 Query: 118 atggcaaggacaccggcaagctggtgatcattgatttcactgcttcctggtgcggtccat 177 | | | |||| |||||||||||||| |||| || |||||||| ||||||||||||||| Sbjct: 68 aggcccaggaagccggcaagctggtggtcatcgacttcactgccgcctggtgcggtccat 127 Query: 178 gtcgtgtcatagccccagtctttgctgagtacgccaagaagttccctggggccatcttcc 237 | || | ||| |||||| | || | || |||||||||||||| || || | | |||| Sbjct: 128 gccgcgccatcgccccactgttcgtcgaacacgccaagaagttcactcaggtcgtgttcc 187 Query: 238 tgaaggtgga 247 |||||||||| Sbjct: 188 tgaaggtgga 197
>dbj|D87984.1| Fagopyrum esculentum mRNA for thioredoxin, complete cds Length = 595 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 243 gtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttgaggcaatgccga 300 |||||||||||||| ||||||| |||||||| | |||||| || ||||||||||||| Sbjct: 275 gtggatgttgatgatttgaaggatgtcgctgaggaatacaaggtggaggcaatgccga 332
>gb|AY344230.1| Ipomoea batatas thioredoxin H3 mRNA, complete cds Length = 676 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 148 ttgatttcactgcttcctggtgcggtcc 175 |||||||||||||||||||||||||||| Sbjct: 219 ttgatttcactgcttcctggtgcggtcc 246
>gb|AY170650.1| Pisum sativum clone 3 thioredoxin h mRNA, complete cds Length = 665 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 148 ttgatttcactgcttcctggtgcggtccatg 178 |||||||||||||||| |||||||||||||| Sbjct: 168 ttgatttcactgcttcttggtgcggtccatg 198
>gb|AY335159.1| Fagopyrum tataricum thioredoxin mRNA, partial cds Length = 328 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 240 aaggtggatgttgatgagctgaaggacgtcgctgaagcatacaatgttgaggcaatgccg 299 ||||||||||||||||| || || |||||||| | |||||| || |||||||||||| Sbjct: 46 aaggtggatgttgatgattgtaatgatgtcgctgaggaatacaaagtggaggcaatgccg 105 Query: 300 acctt 304 ||||| Sbjct: 106 acctt 110
>gb|AF420472.2| Triticum aestivum thioredoxin H mRNA, complete cds Length = 547 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 135 aagctggtgatcattgatttcactgcttcctggtgcggtccatgtcgtgtcatagcccca 194 ||||||||| | ||||| |||||||| || |||||||| ||||| || |||| || ||| Sbjct: 150 aagctggtggtgattgacttcactgcatcatggtgcggaccatgccgcatcatggctcca 209 Query: 195 gtctttgctgagtacgccaagaagttccc 223 | |||||||| ||||||||||||||| Sbjct: 210 atttttgctgatctcgccaagaagttccc 238
>gb|AY245455.1| Hordeum vulgare subsp. vulgare thioredoxin h isoform 2 mRNA, complete cds Length = 369 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 135 aagctggtgatcattgatttcactgcttcctggtgcggtccatgtcgtgtcatagcccca 194 ||||||||| | ||||| |||||||| || |||||||| ||||| || |||| || ||| Sbjct: 103 aagctggtggtgattgacttcactgcatcatggtgcggaccatgccgcatcatggctcca 162 Query: 195 gtctttgctgagtacgccaagaagttccc 223 || || ||||| ||||||||||||||| Sbjct: 163 gttttcgctgatctcgccaagaagttccc 191
>emb|AJ001903.1|TDAJ1903 Triticum durum mRNA for thioredoxin H Length = 630 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 135 aagctggtgatcattgatttcactgcttcctggtgcggtccatgtcgtgtcatagcccca 194 ||||||||| | ||||| |||||||| || |||||||| ||||| || |||| || ||| Sbjct: 180 aagctggtggtgattgacttcactgcatcatggtgcggaccatgccgcatcatggctcca 239 Query: 195 gtctttgctgagtacgccaagaagttccc 223 | |||||||| ||||||||||||||| Sbjct: 240 atttttgctgatctcgccaagaagttccc 268
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 151 atttcactgcttcctggtgcggtccatgtcgtgtcat 187 |||||| |||||||||||| || |||||||||||||| Sbjct: 17877464 atttcagtgcttcctggtgtggaccatgtcgtgtcat 17877500 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 17535258 atggccgccgaggagggagc 17535277 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 15556977 atggccgccgaggagggagc 15556958 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 2371293 atggccgccgaggagggagc 2371274
>dbj|AK101462.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040F19, full insert sequence Length = 851 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 151 atttcactgcttcctggtgcggtccatgtcgtgtcat 187 |||||| |||||||||||| || |||||||||||||| Sbjct: 684 atttcagtgcttcctggtgtggaccatgtcgtgtcat 720
>emb|AL731587.2|OSJN00230 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016N04, complete sequence Length = 164645 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 151 atttcactgcttcctggtgcggtccatgtcgtgtcat 187 |||||| |||||||||||| || |||||||||||||| Sbjct: 74219 atttcagtgcttcctggtgtggaccatgtcgtgtcat 74255
>emb|AJ844021.1| Plantago major mRNA for thioredoxin 1 (trx1 gene) Length = 600 Score = 48.1 bits (24), Expect = 0.035 Identities = 60/72 (83%) Strand = Plus / Plus Query: 135 aagctggtgatcattgatttcactgcttcctggtgcggtccatgtcgtgtcatagcccca 194 ||||||||| | ||||| ||||||||||| ||||| || ||||| || |||| |||||| Sbjct: 160 aagctggtggttattgacttcactgcttcgtggtgtggaccatgccgcttcatcgcccca 219 Query: 195 gtctttgctgag 206 |||| |||||| Sbjct: 220 atcttggctgag 231
>emb|Z70677.1|RCTHIORXN R.communis mRNA for thioredoxin Length = 603 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 233 cttcctgaaggtggatgttgatgagctgaag 263 |||||||||||||||||| ||||| |||||| Sbjct: 205 cttcctgaaggtggatgtggatgaactgaag 235
>ref|XM_476046.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 399 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 151 atttcactgcttcctggtgcggtccatgtcgtgt 184 |||||| |||||||||||| || ||||||||||| Sbjct: 149 atttcagtgcttcctggtgtggaccatgtcgtgt 182
>emb|AL035079.14|HS53C18 Human DNA sequence from clone RP1-53C18 on chromosome 11p12-13 Contains the CAT gene for Catalase, the first coding exon of the ortholog of rat Ankyrin repeat protein CCA3, a Recepin partial pseudogene, and a pseudogene similar to part of DNAJ proteins (HIRIP4, DNJ3, CPR3). Contains two CpG islands, complete sequence Length = 136284 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 93 caagagttcgatacccacatggccaa 118 ||||||||||| |||||||||||||| Sbjct: 53326 caagagttcgagacccacatggccaa 53351
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Minus Query: 151 atttcactgcttcctggtgcggtccatgtcgtgt 184 |||||| |||||||||||| || ||||||||||| Sbjct: 52911 atttcagtgcttcctggtgtggaccatgtcgtgt 52878
>gb|DQ083183.1| Oryza sativa (indica cultivar-group) clone 4S1C03 mRNA sequence Length = 325 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 287 tgaggcaatgccgaccttcctgtttatcaaggacggtg 324 |||| |||||||||||||||| || |||||||| |||| Sbjct: 1 tgagacaatgccgaccttcctattcatcaaggatggtg 38
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Minus Query: 151 atttcactgcttcctggtgcggtccatgtcgtgt 184 |||||| |||||||||||| || ||||||||||| Sbjct: 4078217 atttcagtgcttcctggtgtggaccatgtcgtgt 4078184 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 284 tgttgaggcaatgccgaccttcctgtttatcaagga 319 ||||||||| ||||| || ||||||||||| ||||| Sbjct: 24965637 tgttgaggctatgccaacattcctgtttatgaagga 24965672
>dbj|AK067480.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106B08, full insert sequence Length = 3066 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 151 atttcactgcttcctggtgcggtccatgtcgtgt 184 |||||| |||||||||||| || ||||||||||| Sbjct: 1909 atttcagtgcttcctggtgtggaccatgtcgtgt 1942
>dbj|AK060918.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G10, full insert sequence Length = 1012 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 151 atttcactgcttcctggtgcggtccatgtcgtgt 184 |||||| |||||||||||| || ||||||||||| Sbjct: 457 atttcagtgcttcctggtgtggaccatgtcgtgt 490
>gb|DQ306739.1| Hevea brasiliensis isolate SSH10 mRNA sequence Length = 327 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 231 atcttcctgaaggtggatgttgatga 256 |||||||||||||||||||| ||||| Sbjct: 273 atcttcctgaaggtggatgtggatga 248
>gb|AF435817.1| Oryza sativa thioredoxin h-like protein mRNA, complete cds Length = 399 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 151 atttcactgcttcctggtgcggtccatgtcgtgt 184 |||||| |||||||||||| || ||||||||||| Sbjct: 149 atttcagtgcttcctggtgtggaccatgtcgtgt 182
>ref|NM_101829.2| Arabidopsis thaliana ATTRX4; thiol-disulfide exchange intermediate AT1G19730 (ATTRX4) mRNA, complete cds Length = 652 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 228 gccatcttcctgaaggtggatgttgatga 256 ||||||||| | ||||||||||||||||| Sbjct: 232 gccatcttcttcaaggtggatgttgatga 260
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 122 caaggacaccggcaagctggtgatc 146 |||||||||||||| |||||||||| Sbjct: 1229155 caaggacaccggcacgctggtgatc 1229179
>gb|AC024609.2| Arabidopsis thaliana chromosome I BAC F14P1 genomic sequence, complete sequence Length = 90341 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 228 gccatcttcctgaaggtggatgttgatga 256 ||||||||| | ||||||||||||||||| Sbjct: 39008 gccatcttcttcaaggtggatgttgatga 39036
>ref|XM_541527.2| PREDICTED: Canis familiaris hypothetical LOC484412 (LOC484412), mRNA Length = 2580 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 gttccctggggccatcttcct 238 ||||||||||||||||||||| Sbjct: 2233 gttccctggggccatcttcct 2213
>gb|AF159388.1| Phalaris coerulescens thioredoxin-like protein (Trx) mRNA, Trx-1 allele, complete cds Length = 978 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 151 atttcactgcttcctggtgcggtccatgtcgtgtcat 187 |||||| |||||||||||| || ||||| |||||||| Sbjct: 728 atttcagtgcttcctggtgtgggccatgccgtgtcat 764
>ref|XM_503146.1| Yarrowia lipolytica CLIB122, YALI0D22308g predicted mRNA Length = 333 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 325 agaaggtggacagtgttgtcggtgg 349 ||||||||||||||||| ||||||| Sbjct: 146 agaaggtggacagtgttctcggtgg 170
>emb|Z35473.1|ATTHIRED1 A.thaliana (GREN) mRNA for thioredoxin Length = 642 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 228 gccatcttcctgaaggtggatgttgatga 256 ||||||||| | ||||||||||||||||| Sbjct: 221 gccatcttcttcaaggtggatgttgatga 249
>emb|AJ319808.1|PSA319808 Pisum sativum mRNA for thioredoxin h (trxh gene) Length = 593 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 150 gatttcactgcttcctggtgcggtccatg 178 ||||| |||||||| |||||||||||||| Sbjct: 156 gattttactgcttcgtggtgcggtccatg 184
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 aatggccgccgaggagggagc 70 ||||||||||||||||||||| Sbjct: 7522817 aatggccgccgaggagggagc 7522837
>emb|BX818339.1|CNS0ACPU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL73ZF03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 629 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 228 gccatcttcctgaaggtggatgttgatga 256 ||||||||| | ||||||||||||||||| Sbjct: 226 gccatcttcttcaaggtggatgttgatga 254
>emb|BX841902.1|CNS09Y73 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL20ZE03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 702 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 228 gccatcttcctgaaggtggatgttgatga 256 ||||||||| | ||||||||||||||||| Sbjct: 215 gccatcttcttcaaggtggatgttgatga 243
>gb|BT004710.1| Arabidopsis thaliana At1g19730 gene, complete cds Length = 360 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 228 gccatcttcctgaaggtggatgttgatga 256 ||||||||| | ||||||||||||||||| Sbjct: 181 gccatcttcttcaaggtggatgttgatga 209
>gb|AC007797.7|AC007797 Arabidopsis thaliana chromosome I BAC F6F9 genomic sequence, complete sequence Length = 119942 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 228 gccatcttcctgaaggtggatgttgatga 256 ||||||||| | ||||||||||||||||| Sbjct: 99274 gccatcttcttcaaggtggatgttgatga 99302
>gb|AY088698.1| Arabidopsis thaliana clone 9219 mRNA, complete sequence Length = 590 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 228 gccatcttcctgaaggtggatgttgatga 256 ||||||||| | ||||||||||||||||| Sbjct: 232 gccatcttcttcaaggtggatgttgatga 260
>dbj|AP005916.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0066M12 Length = 162198 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 aatggccgccgaggagggagc 70 ||||||||||||||||||||| Sbjct: 31232 aatggccgccgaggagggagc 31252
>dbj|AP005837.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0024K20 Length = 165041 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 50 aatggccgccgaggagggagc 70 ||||||||||||||||||||| Sbjct: 126621 aatggccgccgaggagggagc 126641
>dbj|AK118542.1| Arabidopsis thaliana At1g19730 mRNA for putative thioredoxin, complete cds, clone: RAFL19-77-A10 Length = 556 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 228 gccatcttcctgaaggtggatgttgatga 256 ||||||||| | ||||||||||||||||| Sbjct: 203 gccatcttcttcaaggtggatgttgatga 231
>gb|AF159389.1|AF159389 Phalaris coerulescens thioredoxin-like protein (Trx) mRNA, Trx-2 allele, complete cds Length = 975 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 151 atttcactgcttcctggtgcggtccatgtcgtgtcat 187 |||||| |||||||||||| || ||||| |||||||| Sbjct: 725 atttcagtgcttcctggtgtgggccatgccgtgtcat 761
>gb|U35828.1|ATU35828 Arabidopsis thaliana thioredoxin h (TRX4) gene, partial cds Length = 829 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 228 gccatcttcctgaaggtggatgttgatga 256 ||||||||| | ||||||||||||||||| Sbjct: 579 gccatcttcttcaaggtggatgttgatga 607
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 244 tggatgttgatgagctgaagg 264 ||||||||||||||||||||| Sbjct: 6342206 tggatgttgatgagctgaagg 6342186
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 325 agaaggtggacagtgttgtcggtgg 349 ||||||||||||||||| ||||||| Sbjct: 2837430 agaaggtggacagtgttctcggtgg 2837406
>gb|AC145545.2| Homo sapiens chromosome UNKNOWN clone RP11-1365M9, complete sequence Length = 184813 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tcatgggttctgcatccacc 404 |||||||||||||||||||| Sbjct: 99048 tcatgggttctgcatccacc 99067
>ref|XM_475666.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 366 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 284 tgttgaggcaatgccgaccttcctgtttatcaagga 319 ||||||||| ||||| || ||||||||||| ||||| Sbjct: 252 tgttgaggctatgccaacattcctgtttatgaagga 287
>ref|XM_471225.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3972 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 1 atggccgccgaggagggagc 20
>ref|NM_195508.1| Oryza sativa (japonica cultivar-group) putative retroelement (OSJNBa0082N11.6), mRNA Length = 900 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 1 atggccgccgaggagggagc 20
>ref|NM_195753.1| Oryza sativa (japonica cultivar-group) putative polyprotein (OSJNBb0008A05.22), mRNA Length = 3798 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 1 atggccgccgaggagggagc 20
>ref|NM_195681.1| Oryza sativa (japonica cultivar-group) putative retroelement (OSJNBa0004A10.2), mRNA Length = 4104 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 1 atggccgccgaggagggagc 20
>ref|NM_195341.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0034E15.13), mRNA Length = 768 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 334 atggccgccgaggagggagc 353
>ref|XM_472106.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1668 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 1 atggccgccgaggagggagc 20
>ref|XM_471895.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1917 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 173 atggccgccgaggagggagc 192
>gb|AC133004.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046F10, complete sequence Length = 184041 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 25764 atggccgccgaggagggagc 25783
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08, complete sequence Length = 144593 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 5821 atggccgccgaggagggagc 5802
>ref|XM_586062.2| PREDICTED: Bos taurus similar to discs large homolog 7 (LOC509161), partial mRNA Length = 3198 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ggttctgcatccacctaagg 409 |||||||||||||||||||| Sbjct: 2858 ggttctgcatccacctaagg 2839
>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0108E17, complete sequence Length = 139829 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 284 tgttgaggcaatgccgaccttcctgtttatcaagga 319 ||||||||| ||||| || ||||||||||| ||||| Sbjct: 34490 tgttgaggctatgccaacattcctgtttatgaagga 34525
>gb|AY089550.1| Drosophila melanogaster LD26837 full insert cDNA Length = 4025 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 ggccatcttcctgaaggtggatgt 250 ||||||||||||||| |||||||| Sbjct: 3206 ggccatcttcctgaaagtggatgt 3229
>gb|AC147648.4| Homo sapiens BAC clone RP11-1413M17 from UL, complete sequence Length = 188992 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tcatgggttctgcatccacc 404 |||||||||||||||||||| Sbjct: 154490 tcatgggttctgcatccacc 154471
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 19088329 atggccgccgaggagggagc 19088310
>gb|AC145613.2| Homo sapiens BAC clone RP11-1266H24 from UL, complete sequence Length = 178925 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tcatgggttctgcatccacc 404 |||||||||||||||||||| Sbjct: 131625 tcatgggttctgcatccacc 131606
>gb|AC145616.2| Homo sapiens BAC clone RP11-1172A19 from UL, complete sequence Length = 172810 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tcatgggttctgcatccacc 404 |||||||||||||||||||| Sbjct: 47746 tcatgggttctgcatccacc 47765
>gb|AC135597.5| Oryza sativa chromosome 3 BAC OSJNBa0034E08 genomic sequence, complete sequence Length = 171437 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 69248 atggccgccgaggagggagc 69267
>gb|AC145547.3| Homo sapiens BAC clone RP11-1437O6 from UL, complete sequence Length = 185637 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tcatgggttctgcatccacc 404 |||||||||||||||||||| Sbjct: 120296 tcatgggttctgcatccacc 120315
>gb|AC144916.3| Homo sapiens BAC clone RP11-15L7 from UL, complete sequence Length = 158759 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tcatgggttctgcatccacc 404 |||||||||||||||||||| Sbjct: 156123 tcatgggttctgcatccacc 156142
>emb|AL845321.4| Human DNA sequence from clone RP11-236F9 on chromosome 9 Contains an aquaporin 7(AQP7) pseudogene, a novel gene, three novel pseudogenes, a pseudogene similar to part of BMS1-like, ribosome assembly protein (yeast)(BMS1L) and a CpG island, complete sequence Length = 158462 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tcatgggttctgcatccacc 404 |||||||||||||||||||| Sbjct: 155855 tcatgggttctgcatccacc 155874
>emb|AL442223.13| Human DNA sequence from clone RP11-426P2 on chromosome 1 Contains the 5' end of a variant of the DAB1 gene for disabled homolog 1 (Drosophila) and a CpG island, complete sequence Length = 54683 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 544 tttgctacagttgctattgtgaag 567 ||||||||| |||||||||||||| Sbjct: 27279 tttgctacacttgctattgtgaag 27256
>emb|AL133173.20| Human DNA sequence from clone RP11-453N3 on chromosome 10 Contains a RING finger protein 18 (RNF18) pseudogene, an actin-related protein 3 homolog (yeast) (ACTR3) pseudogene, a poly(A) cytoplasmic binding protein 3 (PABPC3) pseudogene, a gene for a novel protein similar to ATP-binding cassette sub-family D (ALD) member 1 (ABCD1), two novel genes and two CpG islands, complete sequence Length = 206192 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tcatgggttctgcatccacc 404 |||||||||||||||||||| Sbjct: 24428 tcatgggttctgcatccacc 24409
>emb|CR391971.7| Zebrafish DNA sequence from clone CH211-260O6 in linkage group 21, complete sequence Length = 129478 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 atttcactgcttcctggtgc 170 |||||||||||||||||||| Sbjct: 68856 atttcactgcttcctggtgc 68837
>emb|BX842603.2|OSJN00300 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1159F04, complete sequence Length = 158330 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 17034 atggccgccgaggagggagc 17015
>gb|AC105377.12| Oryza sativa chromosome 10 BAC OSJNBa0034E15 genomic sequence, complete sequence Length = 100285 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 69937 atggccgccgaggagggagc 69956
>emb|BX569684.2|OSJN00290 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0046K02, complete sequence Length = 109366 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 98530 atggccgccgaggagggagc 98511
>emb|AL731635.3|OSJN00277 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0016B03, complete sequence Length = 125780 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 96612 atggccgccgaggagggagc 96593
>gb|AC132872.17| Homo sapiens chromosome 17, clone RP13-516M14, complete sequence Length = 171569 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 gtcggtggcaggaaggatgacatc 365 ||||||||||||||||||| |||| Sbjct: 48470 gtcggtggcaggaaggatgtcatc 48447
>gb|AC131374.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0008A05, complete sequence Length = 124366 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 56155 atggccgccgaggagggagc 56136
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 caaggacaccggcaagctgg 141 |||||||||||||||||||| Sbjct: 1956425 caaggacaccggcaagctgg 1956444
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 caccggcaagctggtgatca 147 |||||||||||||||||||| Sbjct: 1631548 caccggcaagctggtgatca 1631567
>emb|CR381572.5| Human DNA sequence from clone bP-2168N6 on chromosome 21, complete sequence Length = 184355 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tcatgggttctgcatccacc 404 |||||||||||||||||||| Sbjct: 153529 tcatgggttctgcatccacc 153548
>gb|AC093500.2| Drosophila melanogaster 3L BAC RP98-29P5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173558 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 ggccatcttcctgaaggtggatgt 250 ||||||||||||||| |||||||| Sbjct: 67547 ggccatcttcctgaaagtggatgt 67570
>gb|AC113436.28| Pan troglodytes clone rp43-97f19, complete sequence Length = 166631 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tcatgggttctgcatccacc 404 |||||||||||||||||||| Sbjct: 104404 tcatgggttctgcatccacc 104423
>gb|AC090605.7| Homo sapiens chromosome 15, clone RP11-261P5, complete sequence Length = 166870 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 gagttcgatacccacatggccaat 119 |||||||| ||||||||||||||| Sbjct: 99694 gagttcgagacccacatggccaat 99717
>gb|AC108884.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBb0058B20 from chromosome 10, complete sequence Length = 156232 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 13945 atggccgccgaggagggagc 13964
>gb|AC098682.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0004A10, from chromosome 10, complete sequence Length = 144271 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 11865 atggccgccgaggagggagc 11846
>gb|AC091735.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0082N11, from chromosome 10, complete sequence Length = 183345 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 16745 atggccgccgaggagggagc 16764
>ref|NM_079214.2| Drosophila melanogaster Thioredoxin-like CG5495-RA (Txl), mRNA Length = 1151 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 ggccatcttcctgaaggtggatgt 250 ||||||||||||||| |||||||| Sbjct: 319 ggccatcttcctgaaagtggatgt 342
>gb|AC020760.6| Homo sapiens chromosome 16 clone RP11-151C19, complete sequence Length = 188872 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tcatgggttctgcatccacc 404 |||||||||||||||||||| Sbjct: 82115 tcatgggttctgcatccacc 82096
>gb|AC091749.8| Oryza sativa chromosome 10 BAC OSJNBb0008A05 genomic sequence, complete sequence Length = 150465 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 106620 atggccgccgaggagggagc 106601
>ref|XM_625516.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_550), partial mRNA Length = 7059 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 562 gtgaagtttggataattatt 581 |||||||||||||||||||| Sbjct: 1000 gtgaagtttggataattatt 981
>gb|AC074354.8|AC074354 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0065C16, from Chromosome 10, complete sequence Length = 146391 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 101409 atggccgccgaggagggagc 101390
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 11151846 atggccgccgaggagggagc 11151827
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 12906905 atggccgccgaggagggagc 12906886 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 8851548 atggccgccgaggagggagc 8851529 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 8419381 atggccgccgaggagggagc 8419400 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 7382881 atggccgccgaggagggagc 7382900 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 6272379 atggccgccgaggagggagc 6272398
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 6889105 atggccgccgaggagggagc 6889124 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 6576860 atggccgccgaggagggagc 6576841
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 19082370 atggccgccgaggagggagc 19082351
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 15226540 atggccgccgaggagggagc 15226521
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 37432793 atggccgccgaggagggagc 37432774
>gb|AC034151.6| Homo sapiens BAC clone RP11-168J1 from 2, complete sequence Length = 157666 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tcatgggttctgcatccacc 404 |||||||||||||||||||| Sbjct: 72271 tcatgggttctgcatccacc 72290
>gb|AC128677.4| Homo sapiens BAC clone RP11-271A22 from 2, complete sequence Length = 158087 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tcatgggttctgcatccacc 404 |||||||||||||||||||| Sbjct: 92864 tcatgggttctgcatccacc 92883
>gb|AC012640.12| Homo sapiens chromosome 5 clone CTD-2256P15, complete sequence Length = 145122 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 ctcatgggttctgcatccac 403 |||||||||||||||||||| Sbjct: 39294 ctcatgggttctgcatccac 39313
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 27330 atggccgccgaggagggagc 27311
>dbj|AP003611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423B08 Length = 151490 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 144827 atggccgccgaggagggagc 144808
>gb|AF143404.1|AF143404 Drosophila melanogaster thioredoxin-like protein TXL (txl) mRNA, complete cds Length = 1087 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 ggccatcttcctgaaggtggatgt 250 ||||||||||||||| |||||||| Sbjct: 277 ggccatcttcctgaaagtggatgt 300
>dbj|AP005608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0008C07 Length = 146008 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 110315 atggccgccgaggagggagc 110296
>dbj|AP006857.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0002E10 Length = 140486 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 139824 atggccgccgaggagggagc 139843
>dbj|AP005696.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0063K04 Length = 158792 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 37661 atggccgccgaggagggagc 37642
>emb|BX546448.4| Human DNA sequence from clone RP11-509J10 on chromosome 22, complete sequence Length = 172149 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tcatgggttctgcatccacc 404 |||||||||||||||||||| Sbjct: 29131 tcatgggttctgcatccacc 29112
>dbj|AP006615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1165C09 Length = 202985 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 7153 atggccgccgaggagggagc 7172
>dbj|AP005488.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0003D23 Length = 151604 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 10207 atggccgccgaggagggagc 10188
>emb|X78822.1|CRTRXH C.reinhardtii mRNA for thioredoxin-h Length = 1285 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 catcttcctgaaggtggatgttga 253 ||||||||||||||| |||||||| Sbjct: 636 catcttcctgaaggtcgatgttga 659 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 catcttcctgaaggtggatgttga 253 ||||||||||||||| |||||||| Sbjct: 345 catcttcctgaaggtcgatgttga 322
>emb|X80887.1|CRTRXH1 C.reinhardtii Trx h gene Length = 1450 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 catcttcctgaaggtggatgttga 253 ||||||||||||||| |||||||| Sbjct: 551 catcttcctgaaggtcgatgttga 574
>dbj|AK106758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-D09, full insert sequence Length = 3740 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 284 tgttgaggcaatgccgaccttcctgtttatcaagga 319 ||||||||| ||||| || ||||||||||| ||||| Sbjct: 397 tgttgaggctatgccaacattcctgtttatgaagga 432
>dbj|AK059385.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-G10, full insert sequence Length = 682 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 284 tgttgaggcaatgccgaccttcctgtttatcaagga 319 ||||||||| ||||| || ||||||||||| ||||| Sbjct: 366 tgttgaggctatgccaacattcctgtttatgaagga 401
>emb|AL442108.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124E07, complete sequence Length = 127181 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 119821 atggccgccgaggagggagc 119802
>gb|AE003565.3| Drosophila melanogaster chromosome 3L, section 20 of 83 of the complete sequence Length = 284268 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 ggccatcttcctgaaggtggatgt 250 ||||||||||||||| |||||||| Sbjct: 236784 ggccatcttcctgaaagtggatgt 236807
>gb|AC153893.3| Mus musculus 10 BAC RP23-124O20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228194 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 565 aagtttggataattattctgtcta 588 |||||||||||||| ||||||||| Sbjct: 68033 aagtttggataatttttctgtcta 68010
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 12914245 atggccgccgaggagggagc 12914226 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 8856687 atggccgccgaggagggagc 8856668 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 8424480 atggccgccgaggagggagc 8424499 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 7387080 atggccgccgaggagggagc 7387099 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 6273965 atggccgccgaggagggagc 6273984
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 11231035 atggccgccgaggagggagc 11231016
>emb|AL662983.3|OSJN00181 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081G05, complete sequence Length = 173950 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atggccgccgaggagggagc 70 |||||||||||||||||||| Sbjct: 15998 atggccgccgaggagggagc 16017
>dbj|AP006105.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT14C19, TM0190, complete sequence Length = 125299 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 tgctacagttgctattgtga 565 |||||||||||||||||||| Sbjct: 92165 tgctacagttgctattgtga 92184
>dbj|AB053294.1| Oryza sativa (japonica cultivar-group) RTRXH2 mRNA for thioredoxin h, complete cds Length = 740 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 284 tgttgaggcaatgccgaccttcctgtttatcaagga 319 ||||||||| ||||| || ||||||||||| ||||| Sbjct: 367 tgttgaggctatgccaacattcctgtttatgaagga 402 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,181,506 Number of Sequences: 3902068 Number of extensions: 5181506 Number of successful extensions: 94969 Number of sequences better than 10.0: 132 Number of HSP's better than 10.0 without gapping: 134 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 94125 Number of HSP's gapped (non-prelim): 835 length of query: 621 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 598 effective length of database: 17,143,297,704 effective search space: 10251692026992 effective search space used: 10251692026992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
