ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd22d15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|S68728.1| LHC Ib-21=light-harvesting complex I [Hordeum vulgare=barley, Prato, mRNA Chloroplast, 878 nt] Length = 878 Score = 1005 bits (507), Expect = 0.0 Identities = 541/549 (98%), Gaps = 5/549 (0%) Strand = Plus / Plus Query: 1 gtgaaggcgcaggagtgggcggcgctcccagnacgggcaggcgacgtacctgggcaaccc 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 265 gtgaaggcgcaggagtgggcggcgctcccag-acgggcaggcgacgtacctgggcaaccc 323 Query: 61 ggtgccgtggggcaacctgccgaccatcctggcgatcgagttcctggccatcgccttcgc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 324 ggtgccgtggggcaacctgccgaccatcctggcgatcgagttcctggccatcgccttcgc 383 Query: 121 ggagcagcagcgcaccatggagaaggacccggagaagaagaagtaccccggcggcgcctt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 384 ggagcagcagcgcaccatggagaaggacccggagaagaagaagtaccccggcggcgcctt 443 Query: 181 cgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaaggagat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 cgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaaggagat 503 Query: 241 caagaacgggcggctggcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 caagaacgggcggctggcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgta 563 Query: 301 ccccggcaccggcccgctggagaacctggccacgcacctcgcggacccgtggcacaacaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ccccggcaccggcccgctggagaacctggccacgcacctcgcggacccgtggcacaacaa 623 Query: 361 catcggcgacatcgtcatccccagaaatatctacggcccttgagcggagccgaccgggct 420 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 624 catcggcgacatcgtcatccccagaaatatctacggcccttgagcggacgcgaccgggct 683 Query: 421 gagaggagatcgaggagccggagcgcatggttttcattcatgtttctgagtcgatccatt 480 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 684 g---cgagatcgaggagccggagcgcatggttttcattcatgtttctgagtcgatccatt 740 Query: 481 ggttgatcaccttgccacgctggctctgcgcgcgcaccgtccgtgcgtgctggaactgta 540 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 741 ggttgatcaccttgccacgctggctct-cgcgcgcaccgtccgtgcgtgctggaactgta 799 Query: 541 caacaacgt 549 ||||||||| Sbjct: 800 caacaacgt 808
>gb|AF218305.1|AF218305 Hordeum vulgare chlorophyll a/b binding protein precursor (lhca1) mRNA, complete cds; nuclear gene for chloroplast product Length = 784 Score = 783 bits (395), Expect = 0.0 Identities = 402/403 (99%), Gaps = 1/403 (0%) Strand = Plus / Plus Query: 1 gtgaaggcgcaggagtgggcggcgctcccagnacgggcaggcgacgtacctgggcaaccc 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 383 gtgaaggcgcaggagtgggcggcgctcccag-acgggcaggcgacgtacctgggcaaccc 441 Query: 61 ggtgccgtggggcaacctgccgaccatcctggcgatcgagttcctggccatcgccttcgc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 ggtgccgtggggcaacctgccgaccatcctggcgatcgagttcctggccatcgccttcgc 501 Query: 121 ggagcagcagcgcaccatggagaaggacccggagaagaagaagtaccccggcggcgcctt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 502 ggagcagcagcgcaccatggagaaggacccggagaagaagaagtaccccggcggcgcctt 561 Query: 181 cgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaaggagat 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 cgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaaggagat 621 Query: 241 caagaacgggcggctggcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 622 caagaacgggcggctggcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgta 681 Query: 301 ccccggcaccggcccgctggagaacctggccacgcacctcgcggacccgtggcacaacaa 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 682 ccccggcaccggcccgctggagaacctggccacgcacctcgcggacccgtggcacaacaa 741 Query: 361 catcggcgacatcgtcatccccagaaatatctacggcccttga 403 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 catcggcgacatcgtcatccccagaaatatctacggcccttga 784
>gb|AY106149.1| Zea mays PCO102434 mRNA sequence Length = 1081 Score = 519 bits (262), Expect = e-144 Identities = 355/385 (92%), Gaps = 1/385 (0%) Strand = Plus / Plus Query: 1 gtgaaggcgcaggagtgggcggcgctcccagnacgggcaggcgacgtacctgggcaaccc 60 ||||||||||||||||||||||| |||| | ||||||||| |||||||||||| ||| Sbjct: 404 gtgaaggcgcaggagtgggcggccgtccccgg-cgggcaggccacgtacctgggcgcccc 462 Query: 61 ggtgccgtggggcaacctgccgaccatcctggcgatcgagttcctggccatcgccttcgc 120 |||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 463 ggtgccgtggggcacgctgccgaccatcctggtgatcgagttcgtggccatcgccttcgc 522 Query: 121 ggagcagcagcgcaccatggagaaggacccggagaagaagaagtaccccggcggcgcctt 180 ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 523 cgagcaccagcgcaccatggagaaggaccccgagaagaagaagtaccccggcggcgcctt 582 Query: 181 cgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaaggagat 240 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 583 cgacccgctcggcttctccaaggaccccgccaagttcgaggagtacaagctcaaggagat 642 Query: 241 caagaacgggcggctggcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgta 300 ||||||||| || || || |||||||| ||||| || |||||||| |||||||||||||| Sbjct: 643 caagaacggccgcctcgccatgctggccttcgtcggcttctgcgtccagcagtcggcgta 702 Query: 301 ccccggcaccggcccgctggagaacctggccacgcacctcgcggacccgtggcacaacaa 360 ||||||||||||||||||||||||||| ||| | |||||||| ||||||||||||||||| Sbjct: 703 ccccggcaccggcccgctggagaacctcgcctcccacctcgccgacccgtggcacaacaa 762 Query: 361 catcggcgacatcgtcatccccaga 385 ||||||||||||| ||||||||||| Sbjct: 763 catcggcgacatcatcatccccaga 787
>dbj|AK098864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A03, full insert sequence Length = 1046 Score = 442 bits (223), Expect = e-121 Identities = 343/382 (89%), Gaps = 1/382 (0%) Strand = Plus / Plus Query: 5 aggcgcaggagtgggcggcgctcccagnacgggcaggcgacgtacctgggcaacccggtg 64 |||||||||||||||||||| || | ||| ||||| |||||||| |||||||||||| Sbjct: 417 aggcgcaggagtgggcggcggagcccgg-cggccaggccacgtacctcggcaacccggtg 475 Query: 65 ccgtggggcaacctgccgaccatcctggcgatcgagttcctggccatcgccttcgcggag 124 || ||||||| |||||||| ||||||| ||||||||| | |||||||||||||| ||| Sbjct: 476 ccatggggcacgctgccgacgatcctggtcatcgagttcgtcgccatcgccttcgccgag 535 Query: 125 cagcagcgcaccatggagaaggacccggagaagaagaagtaccccggcggcgccttcgac 184 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 536 caccagcgcaccatggagaaggaccccgagaagaagaagtaccccggcggcgccttcgac 595 Query: 185 ccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaag 244 || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 596 cccctcggcttctccaaggaccccgtcaagttcgaggagtacaagctcaaggagatcaag 655 Query: 245 aacgggcggctggcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtacccc 304 |||||||| |||| |||||||| || ||||| |||||||| || |||||||||||||| Sbjct: 656 aacgggcgattggccatgctggcttttgtgggtttctgcgtccaacagtcggcgtacccg 715 Query: 305 ggcaccggcccgctggagaacctggccacgcacctcgcggacccgtggcacaacaacatc 364 ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 716 ggcaccggcccactggagaacctggccagccacctctcggacccgtggcacaacaacatc 775 Query: 365 ggcgacatcgtcatccccagaa 386 ||||||||| ||||||| |||| Sbjct: 776 ggcgacatcatcatcccgagaa 797
>dbj|AK060904.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E07, full insert sequence Length = 1051 Score = 442 bits (223), Expect = e-121 Identities = 343/382 (89%), Gaps = 1/382 (0%) Strand = Plus / Plus Query: 5 aggcgcaggagtgggcggcgctcccagnacgggcaggcgacgtacctgggcaacccggtg 64 |||||||||||||||||||| || | ||| ||||| |||||||| |||||||||||| Sbjct: 422 aggcgcaggagtgggcggcggagcccgg-cggccaggccacgtacctcggcaacccggtg 480 Query: 65 ccgtggggcaacctgccgaccatcctggcgatcgagttcctggccatcgccttcgcggag 124 || ||||||| |||||||| ||||||| ||||||||| | |||||||||||||| ||| Sbjct: 481 ccatggggcacgctgccgacgatcctggtcatcgagttcgtcgccatcgccttcgccgag 540 Query: 125 cagcagcgcaccatggagaaggacccggagaagaagaagtaccccggcggcgccttcgac 184 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 541 caccagcgcaccatggagaaggaccccgagaagaagaagtaccccggcggcgccttcgac 600 Query: 185 ccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaag 244 || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 601 cccctcggcttctccaaggaccccgtcaagttcgaggagtacaagctcaaggagatcaag 660 Query: 245 aacgggcggctggcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtacccc 304 |||||||| |||| |||||||| || ||||| |||||||| || |||||||||||||| Sbjct: 661 aacgggcgattggccatgctggcttttgtgggtttctgcgtccaacagtcggcgtacccg 720 Query: 305 ggcaccggcccgctggagaacctggccacgcacctcgcggacccgtggcacaacaacatc 364 ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 721 ggcaccggcccactggagaacctggccagccacctctcggacccgtggcacaacaacatc 780 Query: 365 ggcgacatcgtcatccccagaa 386 ||||||||| ||||||| |||| Sbjct: 781 ggcgacatcatcatcccgagaa 802
>dbj|AK060800.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F04, full insert sequence Length = 1958 Score = 442 bits (223), Expect = e-121 Identities = 343/382 (89%), Gaps = 1/382 (0%) Strand = Plus / Plus Query: 5 aggcgcaggagtgggcggcgctcccagnacgggcaggcgacgtacctgggcaacccggtg 64 |||||||||||||||||||| || | ||| ||||| |||||||| |||||||||||| Sbjct: 419 aggcgcaggagtgggcggcggagcccgg-cggccaggccacgtacctcggcaacccggtg 477 Query: 65 ccgtggggcaacctgccgaccatcctggcgatcgagttcctggccatcgccttcgcggag 124 || ||||||| |||||||| ||||||| ||||||||| | |||||||||||||| ||| Sbjct: 478 ccatggggcacgctgccgacgatcctggtcatcgagttcgtcgccatcgccttcgccgag 537 Query: 125 cagcagcgcaccatggagaaggacccggagaagaagaagtaccccggcggcgccttcgac 184 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 538 caccagcgcaccatggagaaggaccccgagaagaagaagtaccccggcggcgccttcgac 597 Query: 185 ccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaag 244 || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 598 cccctcggcttctccaaggaccccgtcaagttcgaggagtacaagctcaaggagatcaag 657 Query: 245 aacgggcggctggcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtacccc 304 |||||||| |||| |||||||| || ||||| |||||||| || |||||||||||||| Sbjct: 658 aacgggcgattggccatgctggcttttgtgggtttctgcgtccaacagtcggcgtacccg 717 Query: 305 ggcaccggcccgctggagaacctggccacgcacctcgcggacccgtggcacaacaacatc 364 ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 718 ggcaccggcccactggagaacctggccagccacctctcggacccgtggcacaacaacatc 777 Query: 365 ggcgacatcgtcatccccagaa 386 ||||||||| ||||||| |||| Sbjct: 778 ggcgacatcatcatcccgagaa 799
>gb|AF094776.1|AF094776 Oryza sativa chlorophyll a/b-binding protein precursor (Cab26) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1050 Score = 442 bits (223), Expect = e-121 Identities = 343/382 (89%), Gaps = 1/382 (0%) Strand = Plus / Plus Query: 5 aggcgcaggagtgggcggcgctcccagnacgggcaggcgacgtacctgggcaacccggtg 64 |||||||||||||||||||| || | ||| ||||| |||||||| |||||||||||| Sbjct: 402 aggcgcaggagtgggcggcggagcccgg-cggccaggccacgtacctcggcaacccggtg 460 Query: 65 ccgtggggcaacctgccgaccatcctggcgatcgagttcctggccatcgccttcgcggag 124 || ||||||| |||||||| ||||||| ||||||||| | |||||||||||||| ||| Sbjct: 461 ccatggggcacgctgccgacgatcctggtcatcgagttcgtcgccatcgccttcgccgag 520 Query: 125 cagcagcgcaccatggagaaggacccggagaagaagaagtaccccggcggcgccttcgac 184 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 521 caccagcgcaccatggagaaggaccccgagaagaagaagtaccccggcggcgccttcgac 580 Query: 185 ccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaag 244 || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 581 cccctcggcttctccaaggaccccgtcaagttcgaggagtacaagctcaaggagatcaag 640 Query: 245 aacgggcggctggcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtacccc 304 |||||||| |||| |||||||| || ||||| |||||||| || |||||||||||||| Sbjct: 641 aacgggcgattggccatgctggcttttgtgggtttctgcgtccaacagtcggcgtacccg 700 Query: 305 ggcaccggcccgctggagaacctggccacgcacctcgcggacccgtggcacaacaacatc 364 ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 701 ggcaccggcccactggagaacctggccagccacctctcggacccgtggcacaacaacatc 760 Query: 365 ggcgacatcgtcatccccagaa 386 ||||||||| ||||||| |||| Sbjct: 761 ggcgacatcatcatcccgagaa 782
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 289 bits (146), Expect = 5e-75 Identities = 221/245 (90%), Gaps = 1/245 (0%) Strand = Plus / Plus Query: 5 aggcgcaggagtgggcggcgctcccagnacgggcaggcgacgtacctgggcaacccggtg 64 |||||||||||||||||||| || | ||| ||||| |||||||| |||||||||||| Sbjct: 12296107 aggcgcaggagtgggcggcggagcccgg-cggccaggccacgtacctcggcaacccggtg 12296165 Query: 65 ccgtggggcaacctgccgaccatcctggcgatcgagttcctggccatcgccttcgcggag 124 || ||||||| |||||||| ||||||| ||||||||| | |||||||||||||| ||| Sbjct: 12296166 ccatggggcacgctgccgacgatcctggtcatcgagttcgtcgccatcgccttcgccgag 12296225 Query: 125 cagcagcgcaccatggagaaggacccggagaagaagaagtaccccggcggcgccttcgac 184 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 12296226 caccagcgcaccatggagaaggaccccgagaagaagaagtaccccggcggcgccttcgac 12296285 Query: 185 ccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaag 244 || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 12296286 cccctcggcttctccaaggaccccgtcaagttcgaggagtacaagctcaaggagatcaag 12296345 Query: 245 aacgg 249 ||||| Sbjct: 12296346 aacgg 12296350 Score = 159 bits (80), Expect = 1e-35 Identities = 119/132 (90%) Strand = Plus / Plus Query: 255 tggcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggcc 314 |||| |||||||| || ||||| |||||||| || |||||||||||||| |||||||||| Sbjct: 12296466 tggccatgctggcttttgtgggtttctgcgtccaacagtcggcgtacccgggcaccggcc 12296525 Query: 315 cgctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggcgacatcg 374 | |||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 12296526 cactggagaacctggccagccacctctcggacccgtggcacaacaacatcggcgacatca 12296585 Query: 375 tcatccccagaa 386 ||||||| |||| Sbjct: 12296586 tcatcccgagaa 12296597 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 gccaagttcgaggagctcaa 228 |||||||||||||||||||| Sbjct: 5756529 gccaagttcgaggagctcaa 5756510
>dbj|AP003511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0578B12 Length = 151192 Score = 289 bits (146), Expect = 5e-75 Identities = 221/245 (90%), Gaps = 1/245 (0%) Strand = Plus / Plus Query: 5 aggcgcaggagtgggcggcgctcccagnacgggcaggcgacgtacctgggcaacccggtg 64 |||||||||||||||||||| || | ||| ||||| |||||||| |||||||||||| Sbjct: 12567 aggcgcaggagtgggcggcggagcccgg-cggccaggccacgtacctcggcaacccggtg 12625 Query: 65 ccgtggggcaacctgccgaccatcctggcgatcgagttcctggccatcgccttcgcggag 124 || ||||||| |||||||| ||||||| ||||||||| | |||||||||||||| ||| Sbjct: 12626 ccatggggcacgctgccgacgatcctggtcatcgagttcgtcgccatcgccttcgccgag 12685 Query: 125 cagcagcgcaccatggagaaggacccggagaagaagaagtaccccggcggcgccttcgac 184 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 12686 caccagcgcaccatggagaaggaccccgagaagaagaagtaccccggcggcgccttcgac 12745 Query: 185 ccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaag 244 || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 12746 cccctcggcttctccaaggaccccgtcaagttcgaggagtacaagctcaaggagatcaag 12805 Query: 245 aacgg 249 ||||| Sbjct: 12806 aacgg 12810 Score = 159 bits (80), Expect = 1e-35 Identities = 119/132 (90%) Strand = Plus / Plus Query: 255 tggcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggcc 314 |||| |||||||| || ||||| |||||||| || |||||||||||||| |||||||||| Sbjct: 12926 tggccatgctggcttttgtgggtttctgcgtccaacagtcggcgtacccgggcaccggcc 12985 Query: 315 cgctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggcgacatcg 374 | |||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 12986 cactggagaacctggccagccacctctcggacccgtggcacaacaacatcggcgacatca 13045 Query: 375 tcatccccagaa 386 ||||||| |||| Sbjct: 13046 tcatcccgagaa 13057
>ref|NM_115346.2| Arabidopsis thaliana LHCA1; chlorophyll binding AT3G54890 (LHCA1) transcript variant AT3G54890.1 mRNA, complete cds Length = 996 Score = 105 bits (53), Expect = 2e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggcttc 196 |||||||| ||||| ||||||||||||||||| || ||||| || ||||| || || | | Sbjct: 540 atggagaaagaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatac 599 Query: 197 tccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaagaacgggcggctg 256 || ||||||||| ||| ||||||| | || | || |||||||||||||||||||| Sbjct: 600 tcgaaggaccccaagaagctcgaggaattgaaagttaaagagatcaagaacgggcggctt 659 Query: 257 gcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggcccg 316 ||| || ||||||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 660 gcgctgttggcgtttgtaggattctgtgtgcaacagtcggcttacccggggacaggacca 719 Query: 317 ctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggcga 369 |||||||| |||| || ||| | ||||| || |||||||||||||| ||||| Sbjct: 720 ttggagaacttggcaactcacttggcggatccatggcacaacaacattggcga 772
>gb|BT000852.1| Arabidopsis thaliana At3g54890/F28P10_130 mRNA, complete cds Length = 726 Score = 105 bits (53), Expect = 2e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggcttc 196 |||||||| ||||| ||||||||||||||||| || ||||| || ||||| || || | | Sbjct: 472 atggagaaagaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatac 531 Query: 197 tccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaagaacgggcggctg 256 || ||||||||| ||| ||||||| | || | || |||||||||||||||||||| Sbjct: 532 tcgaaggaccccaagaagctcgaggaattgaaagttaaagagatcaagaacgggcggctt 591 Query: 257 gcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggcccg 316 ||| || ||||||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 592 gcgctgttggcgtttgtaggattctgtgtgcaacagtcggcttacccggggacaggacca 651 Query: 317 ctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggcga 369 |||||||| |||| || ||| | ||||| || |||||||||||||| ||||| Sbjct: 652 ttggagaacttggcaactcacttggcggatccatggcacaacaacattggcga 704
>gb|AF339688.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein (At3g54890) mRNA, complete cds Length = 770 Score = 105 bits (53), Expect = 2e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggcttc 196 |||||||| ||||| ||||||||||||||||| || ||||| || ||||| || || | | Sbjct: 472 atggagaaagaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatac 531 Query: 197 tccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaagaacgggcggctg 256 || ||||||||| ||| ||||||| | || | || |||||||||||||||||||| Sbjct: 532 tcgaaggaccccaagaagctcgaggaattgaaagttaaagagatcaagaacgggcggctt 591 Query: 257 gcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggcccg 316 ||| || ||||||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 592 gcgctgttggcgtttgtaggattctgtgtgcaacagtcggcttacccggggacaggacca 651 Query: 317 ctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggcga 369 |||||||| |||| || ||| | ||||| || |||||||||||||| ||||| Sbjct: 652 ttggagaacttggcaactcacttggcggatccatggcacaacaacattggcga 704
>gb|AF326866.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein (At3g54890) mRNA, complete cds Length = 939 Score = 105 bits (53), Expect = 2e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggcttc 196 |||||||| ||||| ||||||||||||||||| || ||||| || ||||| || || | | Sbjct: 538 atggagaaagaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatac 597 Query: 197 tccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaagaacgggcggctg 256 || ||||||||| ||| ||||||| | || | || |||||||||||||||||||| Sbjct: 598 tcgaaggaccccaagaagctcgaggaattgaaagttaaagagatcaagaacgggcggctt 657 Query: 257 gcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggcccg 316 ||| || ||||||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 658 gcgctgttggcgtttgtaggattctgtgtgcaacagtcggcttacccggggacaggacca 717 Query: 317 ctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggcga 369 |||||||| |||| || ||| | ||||| || |||||||||||||| ||||| Sbjct: 718 ttggagaacttggcaactcacttggcggatccatggcacaacaacattggcga 770
>gb|AY094437.1| Arabidopsis thaliana AT3g54890/F28P10_130 mRNA, complete cds Length = 945 Score = 105 bits (53), Expect = 2e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggcttc 196 |||||||| ||||| ||||||||||||||||| || ||||| || ||||| || || | | Sbjct: 538 atggagaaagaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatac 597 Query: 197 tccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaagaacgggcggctg 256 || ||||||||| ||| ||||||| | || | || |||||||||||||||||||| Sbjct: 598 tcgaaggaccccaagaagctcgaggaattgaaagttaaagagatcaagaacgggcggctt 657 Query: 257 gcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggcccg 316 ||| || ||||||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 658 gcgctgttggcgtttgtaggattctgtgtgcaacagtcggcttacccggggacaggacca 717 Query: 317 ctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggcga 369 |||||||| |||| || ||| | ||||| || |||||||||||||| ||||| Sbjct: 718 ttggagaacttggcaactcacttggcggatccatggcacaacaacattggcga 770
>gb|AF361847.1| Arabidopsis thaliana AT3g54890/F28P10_130 mRNA, complete cds Length = 923 Score = 105 bits (53), Expect = 2e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggcttc 196 |||||||| ||||| ||||||||||||||||| || ||||| || ||||| || || | | Sbjct: 538 atggagaaagaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatac 597 Query: 197 tccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaagaacgggcggctg 256 || ||||||||| ||| ||||||| | || | || |||||||||||||||||||| Sbjct: 598 tcgaaggaccccaagaagctcgaggaattgaaagttaaagagatcaagaacgggcggctt 657 Query: 257 gcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggcccg 316 ||| || ||||||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 658 gcgctgttggcgtttgtaggattctgtgtgcaacagtcggcttacccggggacaggacca 717 Query: 317 ctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggcga 369 |||||||| |||| || ||| | ||||| || |||||||||||||| ||||| Sbjct: 718 ttggagaacttggcaactcacttggcggatccatggcacaacaacattggcga 770
>gb|AY070473.1| Arabidopsis thaliana AT3g54890/F28P10_130 mRNA, complete cds Length = 890 Score = 105 bits (53), Expect = 2e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggcttc 196 |||||||| ||||| ||||||||||||||||| || ||||| || ||||| || || | | Sbjct: 538 atggagaaagaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatac 597 Query: 197 tccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaagaacgggcggctg 256 || ||||||||| ||| ||||||| | || | || |||||||||||||||||||| Sbjct: 598 tcgaaggaccccaagaagctcgaggaattgaaagttaaagagatcaagaacgggcggctt 657 Query: 257 gcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggcccg 316 ||| || ||||||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 658 gcgctgttggcgtttgtaggattctgtgtgcaacagtcggcttacccggggacaggacca 717 Query: 317 ctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggcga 369 |||||||| |||| || ||| | ||||| || |||||||||||||| ||||| Sbjct: 718 ttggagaacttggcaactcacttggcggatccatggcacaacaacattggcga 770
>gb|AF325016.2|AF325016 Arabidopsis thaliana AT3g54890 (AT3g54890/F28P10_130) mRNA, complete cds Length = 923 Score = 105 bits (53), Expect = 2e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggcttc 196 |||||||| ||||| ||||||||||||||||| || ||||| || ||||| || || | | Sbjct: 538 atggagaaagaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatac 597 Query: 197 tccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaagaacgggcggctg 256 || ||||||||| ||| ||||||| | || | || |||||||||||||||||||| Sbjct: 598 tcgaaggaccccaagaagctcgaggaattgaaagttaaagagatcaagaacgggcggctt 657 Query: 257 gcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggcccg 316 ||| || ||||||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 658 gcgctgttggcgtttgtaggattctgtgtgcaacagtcggcttacccggggacaggacca 717 Query: 317 ctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggcga 369 |||||||| |||| || ||| | ||||| || |||||||||||||| ||||| Sbjct: 718 ttggagaacttggcaactcacttggcggatccatggcacaacaacattggcga 770
>gb|AF324692.2|AF324692 Arabidopsis thaliana AT3g54890 (AT3g54890/F28P10_130) mRNA, complete cds Length = 921 Score = 105 bits (53), Expect = 2e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggcttc 196 |||||||| ||||| ||||||||||||||||| || ||||| || ||||| || || | | Sbjct: 536 atggagaaagaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatac 595 Query: 197 tccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaagaacgggcggctg 256 || ||||||||| ||| ||||||| | || | || |||||||||||||||||||| Sbjct: 596 tcgaaggaccccaagaagctcgaggaattgaaagttaaagagatcaagaacgggcggctt 655 Query: 257 gcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggcccg 316 ||| || ||||||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 656 gcgctgttggcgtttgtaggattctgtgtgcaacagtcggcttacccggggacaggacca 715 Query: 317 ctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggcga 369 |||||||| |||| || ||| | ||||| || |||||||||||||| ||||| Sbjct: 716 ttggagaacttggcaactcacttggcggatccatggcacaacaacattggcga 768
>emb|BX823678.1|CNS0A7B9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS66ZA09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 902 Score = 105 bits (53), Expect = 2e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggcttc 196 |||||||| ||||| ||||||||||||||||| || ||||| || ||||| || || | | Sbjct: 518 atggagaaagaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatac 577 Query: 197 tccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaagaacgggcggctg 256 || ||||||||| ||| ||||||| | || | || |||||||||||||||||||| Sbjct: 578 tcgaaggaccccaagaagctcgaggaattgaaagttaaagagatcaagaacgggcggctt 637 Query: 257 gcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggcccg 316 ||| || ||||||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 638 gcgctgttggcgtttgtaggattctgtgtgcaacagtcggcttacccggggacaggacca 697 Query: 317 ctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggcga 369 |||||||| |||| || ||| | ||||| || |||||||||||||| ||||| Sbjct: 698 ttggagaacttggcaactcacttggcggatccatggcacaacaacattggcga 750
>emb|BX823620.1|CNS0A7BA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS58ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 860 Score = 105 bits (53), Expect = 2e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggcttc 196 |||||||| ||||| ||||||||||||||||| || ||||| || ||||| || || | | Sbjct: 524 atggagaaagaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatac 583 Query: 197 tccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaagaacgggcggctg 256 || ||||||||| ||| ||||||| | || | || |||||||||||||||||||| Sbjct: 584 tcgaaggaccccaagaagctcgaggaattgaaagttaaagagatcaagaacgggcggctt 643 Query: 257 gcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggcccg 316 ||| || ||||||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 644 gcgctgttggcgtttgtaggattctgtgtgcaacagtcggcttacccggggacaggacca 703 Query: 317 ctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggcga 369 |||||||| |||| || ||| | ||||| || |||||||||||||| ||||| Sbjct: 704 ttggagaacttggcaactcacttggcggatccatggcacaacaacattggcga 756
>emb|BX822994.1|CNS0A7CC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB7ZA05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 460 Score = 105 bits (53), Expect = 2e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggcttc 196 |||||||| ||||| ||||||||||||||||| || ||||| || ||||| || || | | Sbjct: 50 atggagaaagaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatac 109 Query: 197 tccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaagaacgggcggctg 256 || ||||||||| ||| ||||||| | || | || |||||||||||||||||||| Sbjct: 110 tcgaaggaccccaagaagctcgaggaattgaaagttaaagagatcaagaacgggcggctt 169 Query: 257 gcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggcccg 316 ||| || ||||||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 170 gcgctgttggcgtttgtaggattctgtgtgcaacagtcggcttacccggggacaggacca 229 Query: 317 ctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggcga 369 |||||||| |||| || ||| | ||||| || |||||||||||||| ||||| Sbjct: 230 ttggagaacttggcaactcacttggcggatccatggcacaacaacattggcga 282
>emb|BX825357.1|CNS0A6D9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL31ZG05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 851 Score = 105 bits (53), Expect = 2e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggcttc 196 |||||||| ||||| ||||||||||||||||| || ||||| || ||||| || || | | Sbjct: 515 atggagaaagaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatac 574 Query: 197 tccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaagaacgggcggctg 256 || ||||||||| ||| ||||||| | || | || |||||||||||||||||||| Sbjct: 575 tcgaaggaccccaagaagctcgaggaattgaaagttaaagagatcaagaacgggcggctt 634 Query: 257 gcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggcccg 316 ||| || ||||||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 635 gcgctgttggcgtttgtaggattctgtgtgcaacagtcggcttacccggggacaggacca 694 Query: 317 ctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggcga 369 |||||||| |||| || ||| | ||||| || |||||||||||||| ||||| Sbjct: 695 ttggagaacttggcaactcacttggcggatccatggcacaacaacattggcga 747
>emb|X56062.1|ATCABI A.thaliana Cab mRNA for photossystem I chlorophyll A/B-binding protein Length = 933 Score = 105 bits (53), Expect = 2e-19 Identities = 188/233 (80%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggcttc 196 |||||||| ||||| ||||||||||||||||| || ||||| || ||||| || || | | Sbjct: 579 atggagaaagaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatac 638 Query: 197 tccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaagaacgggcggctg 256 || ||||||||| ||| ||||||| | || | || |||||||||||||||||||| Sbjct: 639 tcgaaggaccccaagaagctcgaggaattgaaagttaaagagatcaagaacgggcggctt 698 Query: 257 gcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggcccg 316 ||| || ||||||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 699 gcgctgttggcgtttgtaggattctgtgtgcaacagtcggcttacccggggacaggacca 758 Query: 317 ctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggcga 369 |||||||| |||| || ||| | ||||| || |||||||||||||| ||||| Sbjct: 759 ttggagaacttggcaactcacttggcggatccatggcacaacaacattggcga 811
>emb|BX822215.1|CNS0A753 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB1ZH02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 873 Score = 97.6 bits (49), Expect = 4e-17 Identities = 187/233 (80%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggcttc 196 |||||||| ||||| ||||||||||||||||| || ||||| || ||||| || || | | Sbjct: 523 atggagaaagaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatac 582 Query: 197 tccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaagaacgggcggctg 256 || ||||||||| ||| ||||||| | || | || |||||||||||||||||||| Sbjct: 583 tcgaaggaccccaagaagctcgaggaattgaaagttaaagagatcaagaacgggcggctt 642 Query: 257 gcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggcccg 316 ||| || ||||||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 643 gcgctgttggcgtttgtaggattctgtgtgcaacagtcggcttacccggggacaggacca 702 Query: 317 ctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggcga 369 |||||||| |||| || ||| | ||||| || || ||||||||||| ||||| Sbjct: 703 ttggagaacttggcaactcacttggcggatccatgacacaacaacattggcga 755
>gb|AF241524.1|AF241524 Asarina barclaiana chlorophyll a/b-binding protein type I mRNA, partial cds Length = 507 Score = 91.7 bits (46), Expect = 2e-15 Identities = 244/310 (78%) Strand = Plus / Plus Query: 51 tgggcaacccggtgccgtggggcaacctgccgaccatcctggcgatcgagttcctggcca 110 ||||||||||||| || ||||||| ||| || || || ||| ||| || ||| |||| | Sbjct: 197 tgggcaacccggttccatggggcaccctacccacaattttggtgattgaattcttggcta 256 Query: 111 tcgccttcgcggagcagcagcgcaccatggagaaggacccggagaagaagaagtaccccg 170 | ||||| | |||||| ||| | | ||||||||| |||||||| |||| ||||||||| | Sbjct: 257 ttgcctttgtggagcaccagaggagcatggagaaagacccggaaaagaggaagtacccgg 316 Query: 171 gcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagc 230 | || || ||||||||| | |||| |||||||||||| ||||| ||||| ||||| Sbjct: 317 gtggggctttcgacccgttgggctactccaaggacccgaaaaagtttgaggaactcaaag 376 Query: 231 tcaaggagatcaagaacgggcggctggcgatgctggcgttcgtggggttctgcgtgcagc 290 ||||||| ||||| || || || || ||| || | || || ||||| ||||||||||| | Sbjct: 377 tcaaggaaatcaaaaatggccgtctagcgttgttagcatttgtgggattctgcgtgcaac 436 Query: 291 agtcggcgtaccccggcaccggcccgctggagaacctggccacgcacctcgcggacccgt 350 | ||||| ||||| || || || || |||||||| |||| || ||| | |||||||| | Sbjct: 437 aatcggcatacccgggtacgggtccattggagaacttggcaactcacttggcggacccct 496 Query: 351 ggcacaacaa 360 |||| ||||| Sbjct: 497 ggcataacaa 506
>emb|BX822507.1|CNS0A73P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB43ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 885 Score = 91.7 bits (46), Expect = 2e-15 Identities = 188/234 (80%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggcttc 196 |||||||| ||||| ||||||||||||||||| || ||||| || ||||| || || | | Sbjct: 519 atggagaaagaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatac 578 Query: 197 tccaaggaccccgccaa-gttcgaggagctcaagctcaaggagatcaagaacgggcggct 255 || ||||||||| || | ||||||| | || | || |||||||||||||||||||| Sbjct: 579 tcgaaggaccccaagaacgctcgaggaattgaaagttaaagagatcaagaacgggcggct 638 Query: 256 ggcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggccc 315 ||| || ||||||| || || ||||| ||||| |||||||| ||||| || || || || Sbjct: 639 tgcgctgttggcgtttgtaggattctgtgtgcaacagtcggcttacccggggacaggacc 698 Query: 316 gctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggcga 369 |||||||| |||| || ||| | ||||| || |||||||||||||| ||||| Sbjct: 699 attggagaacttggcaactcacttggcggatccatggcacaacaacattggcga 752
>ref|NM_180375.1| Arabidopsis thaliana LHCA1 AT3G54890 (LHCA1) transcript variant AT3G54890.3 mRNA, complete cds Length = 929 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 236 gagatcaagaacgggcggctggcgatgctggcgttcgtggggttctgcgtgcagcagtcg 295 |||||||||||||||||||| ||| || ||||||| || || ||||| ||||| |||||| Sbjct: 572 gagatcaagaacgggcggcttgcgctgttggcgtttgtaggattctgtgtgcaacagtcg 631 Query: 296 gcgtaccccggcaccggcccgctggagaacctggccacgcacctcgcggacccgtggcac 355 || ||||| || || || || |||||||| |||| || ||| | ||||| || |||||| Sbjct: 632 gcttacccggggacaggaccattggagaacttggcaactcacttggcggatccatggcac 691 Query: 356 aacaacatcggcga 369 |||||||| ||||| Sbjct: 692 aacaacattggcga 705
>ref|NM_180374.1| Arabidopsis thaliana LHCA1 AT3G54890 (LHCA1) transcript variant AT3G54890.2 mRNA, complete cds Length = 894 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 236 gagatcaagaacgggcggctggcgatgctggcgttcgtggggttctgcgtgcagcagtcg 295 |||||||||||||||||||| ||| || ||||||| || || ||||| ||||| |||||| Sbjct: 537 gagatcaagaacgggcggcttgcgctgttggcgtttgtaggattctgtgtgcaacagtcg 596 Query: 296 gcgtaccccggcaccggcccgctggagaacctggccacgcacctcgcggacccgtggcac 355 || ||||| || || || || |||||||| |||| || ||| | ||||| || |||||| Sbjct: 597 gcttacccggggacaggaccattggagaacttggcaactcacttggcggatccatggcac 656 Query: 356 aacaacatcggcga 369 |||||||| ||||| Sbjct: 657 aacaacattggcga 670
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||||||||||||||||||||| || || | ||||||| ||||| |||| Sbjct: 10793549 taccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgcggag 10793608 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 10793609 ctcaaggtgaaggagatcaagaacgg 10793634 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgctggcgttcgtggggttctg 282 ||||||||||||||||||| |||| || ||||| || |||||||||||||| Sbjct: 16234585 caaggagatcaagaacgggaggctcgccatgctcgccttcgtggggttctg 16234635
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||||||||||||||||||||| || || | ||||||| ||||| |||| Sbjct: 17272 taccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgcggag 17331 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 17332 ctcaaggtgaaggagatcaagaacgg 17357
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||||||||||||||||||||| || || | ||||||| ||||| |||| Sbjct: 130167 taccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgcggag 130226 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 130227 ctcaaggtgaaggagatcaagaacgg 130252
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||||||||||||||||||||| || || | ||||||| ||||| |||| Sbjct: 617 taccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgcggag 676 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 677 ctcaaggtgaaggagatcaagaacgg 702
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||||||||||||||||||||| || || | ||||||| ||||| |||| Sbjct: 622 taccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgcggag 681 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 682 ctcaaggtgaaggagatcaagaacgg 707
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||||||||||||||||||||| || || | ||||||| ||||| |||| Sbjct: 624 taccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgcggag 683 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 684 ctcaaggtgaaggagatcaagaacgg 709
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||||||||||||||||||||| || || | ||||||| ||||| |||| Sbjct: 622 taccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgcggag 681 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 682 ctcaaggtgaaggagatcaagaacgg 707
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||||||||||||||||||||| || || | ||||||| ||||| |||| Sbjct: 622 taccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgcggag 681 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 682 ctcaaggtgaaggagatcaagaacgg 707
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 77.8 bits (39), Expect = 3e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||||||||||||||||||||| || || | ||||||| ||||| |||| Sbjct: 603 taccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgttcgcggag 662 Query: 224 ctcaagctcaaggagatcaagaa 246 |||||| | |||||||||||||| Sbjct: 663 ctcaaggtgaaggagatcaagaa 685
>gb|AF195794.1|AF195794 Chlamydomonas reinhardtii chlorophyll A-B binding protein of LHCI (CAB6A) mRNA, complete cds Length = 1136 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 167 cccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctc 226 |||||||| ||||||||||| || |||||| |||||||| | |||||| | ||||| Sbjct: 501 cccggcggtgccttcgaccccctgggcttcgccaaggactcgtccaagtcgggtgagctg 560 Query: 227 aagctcaaggagatcaagaacgggcggctggc 258 ||||| |||||||||||||||||||| ||||| Sbjct: 561 aagctgaaggagatcaagaacgggcgcctggc 592
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 69.9 bits (35), Expect = 8e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 163 gtaccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgagga 222 ||||||||||||||||||||||||||||||| || || | ||||||| || || ||| Sbjct: 1013 gtaccccggcggcgccttcgacccgctcggcctcgccgatgaccccgaggcgtgcgcgga 1072 Query: 223 gctcaagctcaaggagatcaagaacgg 249 ||||||| | ||| ||||||||||||| Sbjct: 1073 gctcaaggtgaagaagatcaagaacgg 1099
>gb|AF104633.2| Chlamydomonas reinhardtii light harvesting complex I protein precursor (Lhca1) mRNA, complete cds Length = 1129 Score = 69.9 bits (35), Expect = 8e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 ||||||||||| ||||||||||| || |||||| |||||||| | |||||| | ||| Sbjct: 503 taccccggcggtgccttcgaccccctgggcttcgccaaggactcgtccaagtcgggtgag 562 Query: 224 ctcaagctcaaggagatcaagaacgggcggctggc 258 || ||||| ||||||||||||||||| || ||||| Sbjct: 563 ctgaagctgaaggagatcaagaacggccgcctggc 597
>emb|X65119.1|CRCABI1MR C.reinhardtii cabI-1 mRNA for light harvesting complex protein I-20 (LHCPI-20) Length = 1073 Score = 69.9 bits (35), Expect = 8e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 ||||||||||| ||||||||||| || |||||| |||||||| | |||||| | ||| Sbjct: 452 taccccggcggtgccttcgaccccctgggcttcgccaaggactcgtccaagtcgggtgag 511 Query: 224 ctcaagctcaaggagatcaagaacgggcggctggc 258 || ||||| ||||||||||||||||| || ||||| Sbjct: 512 ctgaagctgaaggagatcaagaacggccgcctggc 546
>gb|AC172870.1| Brassica rapa subsp. pekinensis clone KBrH004A06, complete sequence Length = 145603 Score = 67.9 bits (34), Expect = 3e-08 Identities = 94/114 (82%) Strand = Plus / Plus Query: 136 catggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggctt 195 ||||||||| ||||| ||||| ||||||||||| || ||||| || ||||| || || | Sbjct: 131880 catggagaaagaccctgagaaaaagaagtaccctggaggcgcatttgaccctcttggata 131939 Query: 196 ctccaaggaccccgccaagttcgaggagctcaagctcaaggagatcaagaacgg 249 |||||||||||| ||||| |||||| | || ||||||||||||||||||| Sbjct: 131940 ctccaaggacccgaagaagtttgaggagttgaaagtcaaggagatcaagaacgg 131993 Score = 60.0 bits (30), Expect = 8e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 264 tggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggcaccggcccgctggaga 323 ||||||| || || ||||| |||||||| ||||| ||||| ||||| || || |||||| Sbjct: 132094 tggcgtttgtaggattctgtgtgcagcaatcggcctacccaggcacaggaccattggaga 132153 Query: 324 acctggccacgcacctcgcggacccgtggcacaacaacatcggcga 369 ||||||| || ||| | ||||| || |||||||| ||||| ||||| Sbjct: 132154 acctggctactcacttggcggatccatggcacaaaaacattggcga 132199
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 163 gtaccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgagga 222 |||||| |||||||||||||||||||||||| || || | ||||| | || |||| || Sbjct: 79206 gtacccaggcggcgccttcgacccgctcggcctcgccgacgaccctgacaccttcgccga 79147 Query: 223 gctcaagctcaaggagatcaagaacgg 249 ||||||| | |||||| |||||||||| Sbjct: 79146 gctcaaggtgaaggagctcaagaacgg 79120
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 163 gtaccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgagga 222 |||||| |||||||||||||||||||||||| || || | ||||| | || |||| || Sbjct: 21808610 gtacccaggcggcgccttcgacccgctcggcctcgccgacgaccctgacaccttcgccga 21808669 Query: 223 gctcaagctcaaggagatcaagaacgg 249 ||||||| | |||||| |||||||||| Sbjct: 21808670 gctcaaggtgaaggagctcaagaacgg 21808696 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 17148479 aacgggcggctggcgatggtggggttcgtg 17148450 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 gccaagttcgaggagctcaa 228 |||||||||||||||||||| Sbjct: 28353463 gccaagttcgaggagctcaa 28353482 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 gccaagttcgaggagctcaa 228 |||||||||||||||||||| Sbjct: 9350739 gccaagttcgaggagctcaa 9350720
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 163 gtaccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgagga 222 |||||| |||||||||||||||||||||||| || || | ||||| | || |||| || Sbjct: 21801639 gtacccaggcggcgccttcgacccgctcggcctcgccgacgaccctgacaccttcgccga 21801698 Query: 223 gctcaagctcaaggagatcaagaacgg 249 ||||||| | |||||| |||||||||| Sbjct: 21801699 gctcaaggtgaaggagctcaagaacgg 21801725 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 17142048 aacgggcggctggcgatggtggggttcgtg 17142019 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 gccaagttcgaggagctcaa 228 |||||||||||||||||||| Sbjct: 28444787 gccaagttcgaggagctcaa 28444806 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 gccaagttcgaggagctcaa 228 |||||||||||||||||||| Sbjct: 9348860 gccaagttcgaggagctcaa 9348841
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgctggcgttcgtggggttctg 282 ||||||||||||||||||| |||| || ||||| || |||||||||||||| Sbjct: 51101 caaggagatcaagaacgggaggctcgccatgctcgccttcgtggggttctg 51151
>dbj|AP005424.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0556H01 Length = 149800 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgctggcgttcgtggggttctg 282 ||||||||||||||||||| |||| || ||||| || |||||||||||||| Sbjct: 139186 caaggagatcaagaacgggaggctcgccatgctcgccttcgtggggttctg 139236
>dbj|AK067780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114F21, full insert sequence Length = 919 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgctggcgttcgtggggttctg 282 ||||||||||||||||||| |||| || ||||| || |||||||||||||| Sbjct: 708 caaggagatcaagaacgggaggctcgccatgctcgccttcgtggggttctg 758
>dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full insert sequence Length = 1106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 163 gtaccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgagga 222 |||||| |||||||||||||||||||||||| || || | ||||| | || |||| || Sbjct: 609 gtacccaggcggcgccttcgacccgctcggcctcgccgacgaccctgacaccttcgccga 668 Query: 223 gctcaagctcaaggagatcaagaacgg 249 ||||||| | |||||| |||||||||| Sbjct: 669 gctcaaggtgaaggagctcaagaacgg 695
>dbj|AK058315.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A06, full insert sequence Length = 685 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 163 gtaccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgagga 222 |||||| |||||||||||||||||||||||| || || | ||||| | || |||| || Sbjct: 184 gtacccaggcggcgccttcgacccgctcggcctcgccgacgaccctgacaccttcgccga 243 Query: 223 gctcaagctcaaggagatcaagaacgg 249 ||||||| | |||||| |||||||||| Sbjct: 244 gctcaaggtgaaggagctcaagaacgg 270
>dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 989 Score = 61.9 bits (31), Expect = 2e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 163 gtaccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgagga 222 |||||| |||||||||||||||||||||||| || || | ||||| | || |||| || Sbjct: 590 gtacccaggcggcgccttcgacccgctcggcctcgccgacgaccctgacaccttcgccga 649 Query: 223 gctcaagctcaaggagatcaagaacgg 249 ||||||| | |||||| |||||||||| Sbjct: 650 gctcaaggtgaaggagctcaagaacgg 676
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||| |||||||||||||||| || || | ||||||| ||||| ||| Sbjct: 565 taccccggcggcagcttcgacccgctcggcctcgccgacgaccccgaggcgttcgccgag 624 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 625 ctcaaggtgaaggagatcaagaacgg 650
>emb|AL049655.2|ATF28P10 Arabidopsis thaliana DNA chromosome 3, BAC clone F28P10 Length = 90736 Score = 60.0 bits (30), Expect = 8e-06 Identities = 99/122 (81%) Strand = Plus / Plus Query: 248 gggcggctggcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggc 307 |||||||| ||| || ||||||| || || ||||| ||||| |||||||| ||||| || Sbjct: 47430 gggcggcttgcgctgttggcgtttgtaggattctgtgtgcaacagtcggcttacccgggg 47489 Query: 308 accggcccgctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggc 367 || || || |||||||| |||| || ||| | ||||| || |||||||||||||| ||| Sbjct: 47490 acaggaccattggagaacttggcaactcacttggcggatccatggcacaacaacattggc 47549 Query: 368 ga 369 || Sbjct: 47550 ga 47551 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggcttc 196 |||||||| ||||| ||||||||||||||||| || ||||| || ||||| || || | | Sbjct: 47228 atggagaaagaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatac 47287 Query: 197 tccaaggacccc 208 || ||||||||| Sbjct: 47288 tcgaaggacccc 47299
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||| |||||||||||||||| || || | ||||||| ||||| ||| Sbjct: 14109 taccccggcggcagcttcgacccgctcggcctcgccgacgaccccgaggcgttcgccgag 14050 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 14049 ctcaaggtgaaggagatcaagaacgg 14024
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||| |||||||||||||||| || || | ||||||| ||||| ||| Sbjct: 30024902 taccccggcggcagcttcgacccgctcggcctcgccgacgaccccgaggcgttcgccgag 30024961 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 30024962 ctcaaggtgaaggagatcaagaacgg 30024987 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||| |||||||||||||||| || || | ||||| | |||| |||| Sbjct: 23604096 taccccggcggcagcttcgacccgctcggcctcgccgacgacccggaggccttcgcggag 23604155 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 23604156 ctcaaggtgaaggagatcaagaacgg 23604181 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 8061412 aacgggcggctggcgatggtggggttcgtg 8061441
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||| |||||||||||||||| || || | ||||||| ||||| ||| Sbjct: 20892 taccccggcggcagcttcgacccgctcggcctcgccgacgaccccgaggcgttcgccgag 20951 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 20952 ctcaaggtgaaggagatcaagaacgg 20977
>dbj|AB122114.1| Chlamydomonas reinhardtii LhcI-1 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 2649 Score = 60.0 bits (30), Expect = 8e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 227 aagctcaaggagatcaagaacgggcggctggcgatgctggcgttcg 272 ||||| ||||||||||||||||| || ||||| ||||||||||||| Sbjct: 2283 aagctgaaggagatcaagaacggccgtctggccatgctggcgttcg 2328
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 ||||| |||||||||||||||||||||||| || || | ||||| | |||| |||| Sbjct: 1053 tacccgggcggcgccttcgacccgctcggcctcgccgatgacccggaggccttcgcggag 1112 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 1113 ctcaaggtgaaggagatcaagaacgg 1138
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||| |||||||||||||||| || || | ||||||| ||||| ||| Sbjct: 646 taccccggcggcagcttcgacccgctcggcctcgccgacgaccccgaggcgttcgccgag 705 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 706 ctcaaggtgaaggagatcaagaacgg 731
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||| |||||||||||||||| || || | ||||||| ||||| ||| Sbjct: 646 taccccggcggcagcttcgacccgctcggcctcgccgacgaccccgaggcgttcgccgag 705 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 706 ctcaaggtgaaggagatcaagaacgg 731
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 60.0 bits (30), Expect = 8e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||| |||||||||||||||| || || | ||||||| ||||| ||| Sbjct: 648 taccccggcggcagcttcgacccgctcggcctcgccgacgaccccgaggcgttcgccgag 707 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 708 ctcaaggtgaaggagatcaagaacgg 733
>gb|M85150.1|ATHCAB6P Arabidopsis thaliana chlorophyll A/B-binding protein gene, complete cds Length = 2904 Score = 60.0 bits (30), Expect = 8e-06 Identities = 99/122 (81%) Strand = Plus / Plus Query: 248 gggcggctggcgatgctggcgttcgtggggttctgcgtgcagcagtcggcgtaccccggc 307 |||||||| ||| || ||||||| || || ||||| ||||| |||||||| ||||| || Sbjct: 2288 gggcggcttgcgctgttggcgtttgtaggattctgtgtgcaacagtcggcttacccgggg 2347 Query: 308 accggcccgctggagaacctggccacgcacctcgcggacccgtggcacaacaacatcggc 367 || || || |||||||| |||| || ||| | ||||| || |||||||||||||| ||| Sbjct: 2348 acaggaccattggagaacttggcaactcacttggcggatccatggcacaacaacattggc 2407 Query: 368 ga 369 || Sbjct: 2408 ga 2409 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagtaccccggcggcgccttcgacccgctcggcttc 196 |||||||| ||||| ||||||||||||||||| || ||||| || ||||| || || | | Sbjct: 2086 atggagaaagaccctgagaagaagaagtacccgggaggcgcatttgaccctcttggatac 2145 Query: 197 tccaaggacccc 208 || ||||||||| Sbjct: 2146 tcgaaggacccc 2157
>ref|XM_478729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 616 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 675 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 676 gatcaagaa 684
>ref|XM_507374.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 995 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 640 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 699 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 700 gatcaagaa 708
>ref|XM_507373.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1007 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 640 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 699 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 700 gatcaagaa 708
>ref|XM_507372.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1108 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 642 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 701 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 702 gatcaagaa 710
>ref|XM_507371.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1000 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 645 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 704 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 705 gatcaagaa 713
>ref|XM_507370.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1012 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 645 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 704 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 705 gatcaagaa 713
>ref|XM_507369.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1032 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 647 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 706 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 707 gatcaagaa 715
>ref|XM_506410.2| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1159 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 680 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 739 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 740 gatcaagaa 748
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 22434653 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 22434712 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 22434713 gatcaagaa 22434721 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 23305179 caaggagatcaagaacgggcggctcgccatgct 23305211 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 4178538 aacgggcggctggcgatggtggggttcgtg 4178567 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 4176097 aacgggcggctggcgatggtggggttcgtg 4176126
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 95720 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 95779 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 95780 gatcaagaa 95788
>dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G05, full insert sequence Length = 1012 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 645 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 704 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 705 gatcaagaa 713
>dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F03, full insert sequence Length = 1000 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 645 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 704 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 705 gatcaagaa 713
>emb|AJ309102.1|PPI309102 Pinus pinaster partial mRNA for putative chlorophyll A-B binding protein type I Length = 684 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 214 gttcgaggagctcaagctcaaggagatcaagaacgggcggctggcgatg 262 ||||| |||||| ||| | |||||||| ||||||||||||||||||||| Sbjct: 407 gttcgcggagctgaaggtgaaggagattaagaacgggcggctggcgatg 455
>dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C03, full insert sequence Length = 973 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 616 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 675 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 676 gatcaagaa 684
>dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C07, full insert sequence Length = 1012 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 645 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 704 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 705 gatcaagaa 713
>dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E11, full insert sequence Length = 995 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 640 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 699 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 700 gatcaagaa 708
>dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D10, full insert sequence Length = 1007 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 640 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 699 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 700 gatcaagaa 708
>dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D02, full insert sequence Length = 1000 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 645 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 704 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 705 gatcaagaa 713
>dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G03, full insert sequence Length = 1107 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 641 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 700 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 701 gatcaagaa 709
>dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G12, full insert sequence Length = 1032 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 647 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 706 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 707 gatcaagaa 715
>dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H12, full insert sequence Length = 1040 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| ||||||||| ||||||| Sbjct: 645 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccgagctcaaggtcaagga 704 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 705 gatcaagaa 713
>gb|AY104614.1| Zea mays PCO084486 mRNA sequence Length = 1214 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 221 gagctcaagctcaaggagatcaagaacgg 249 ||||||||||||||||||||||||||||| Sbjct: 817 gagctcaagctcaaggagatcaagaacgg 845
>emb|AM050696.1| Rhodomonas sp. CS24 lhcc5 gene for light-harvesting complex protein Lhcc5 precursor, exons 1-3 Length = 4979 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 226 caagctcaaggagatcaagaacgggcggctggcgatg 262 ||||||||||||||||||||||||||| || |||||| Sbjct: 2388 caagctcaaggagatcaagaacgggcgcctcgcgatg 2424
>ref|XM_482572.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1070 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtggggttc 280 |||||| |||||||||||||||||||| |||||||| Sbjct: 663 aacgggaggctggcgatgctggcgttcttggggttc 698
>ref|XM_507585.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1138 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtggggttc 280 |||||| |||||||||||||||||||| |||||||| Sbjct: 667 aacgggaggctggcgatgctggcgttcttggggttc 702
>ref|XM_507584.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1138 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtggggttc 280 |||||| |||||||||||||||||||| |||||||| Sbjct: 667 aacgggaggctggcgatgctggcgttcttggggttc 702
>ref|XM_507583.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1178 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtggggttc 280 |||||| |||||||||||||||||||| |||||||| Sbjct: 664 aacgggaggctggcgatgctggcgttcttggggttc 699
>ref|XM_507582.1| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1188 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtggggttc 280 |||||| |||||||||||||||||||| |||||||| Sbjct: 663 aacgggaggctggcgatgctggcgttcttggggttc 698
>ref|XM_507239.2| PREDICTED Oryza sativa (japonica cultivar-group), P0413H11.35 mRNA Length = 1191 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtggggttc 280 |||||| |||||||||||||||||||| |||||||| Sbjct: 666 aacgggaggctggcgatgctggcgttcttggggttc 701
>ref|XM_464479.1| Oryza sativa (japonica cultivar-group), mRNA Length = 675 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 564 aggagctcaagctcaaggagatcaagaa 591
>ref|XM_464478.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 712 aggagctcaagctcaaggagatcaagaa 739
>ref|XM_507457.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1078 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 712 aggagctcaagctcaaggagatcaagaa 739
>ref|XM_507456.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1121 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 712 aggagctcaagctcaaggagatcaagaa 739
>ref|XM_507455.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1112 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 695 aggagctcaagctcaaggagatcaagaa 722
>ref|XM_507454.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1121 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 704 aggagctcaagctcaaggagatcaagaa 731
>ref|XM_507453.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1127 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 710 aggagctcaagctcaaggagatcaagaa 737
>ref|XM_507452.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1127 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 710 aggagctcaagctcaaggagatcaagaa 737
>ref|XM_507451.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 712 aggagctcaagctcaaggagatcaagaa 739
>ref|XM_507450.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 712 aggagctcaagctcaaggagatcaagaa 739
>ref|XM_507449.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 712 aggagctcaagctcaaggagatcaagaa 739
>ref|XM_507448.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 712 aggagctcaagctcaaggagatcaagaa 739
>ref|XM_464480.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 600 aggagctcaagctcaaggagatcaagaa 627
>ref|XM_507447.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1145 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 728 aggagctcaagctcaaggagatcaagaa 755
>ref|XM_507446.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1145 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 728 aggagctcaagctcaaggagatcaagaa 755
>ref|XM_507445.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1148 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 731 aggagctcaagctcaaggagatcaagaa 758
>ref|XM_507444.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1148 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 731 aggagctcaagctcaaggagatcaagaa 758
>ref|XM_507443.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1151 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 734 aggagctcaagctcaaggagatcaagaa 761
>ref|XM_507442.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1168 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 751 aggagctcaagctcaaggagatcaagaa 778
>ref|XM_507441.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1198 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 781 aggagctcaagctcaaggagatcaagaa 808
>ref|XM_506748.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1524_D08.28-2 mRNA Length = 1129 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 711 aggagctcaagctcaaggagatcaagaa 738
>gb|AY445626.2| Oryza sativa (japonica cultivar-group) chlorophyll a/b binding protein presusor mRNA, complete cds; nuclear gene for chloroplast product Length = 1128 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtggggttc 280 |||||| |||||||||||||||||||| |||||||| Sbjct: 643 aacgggaggctggcgatgctggcgttcttggggttc 678
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 5469065 aggagctcaagctcaaggagatcaagaa 5469038 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 agctcaagctcaaggagatcaa 243 |||||||||||||||||||||| Sbjct: 32601143 agctcaagctcaaggagatcaa 32601164 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 9470774 aacgggcggctggcgatggtggggttcgtg 9470745
>dbj|AB211497.1| Lemna paucicostata LpCAB1 mRNA for CAB homologue1, partial cds Length = 695 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 215 ttcgaggagctcaagctcaaggagatcaagaacgggcggctggcgatg 262 |||| |||||| ||| | ||||||||||||||||| |||||||||||| Sbjct: 527 ttcgcggagctgaaggtgaaggagatcaagaacggacggctggcgatg 574
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 122646 aggagctcaagctcaaggagatcaagaa 122619
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 13800 aggagctcaagctcaaggagatcaagaa 13773
>dbj|AK109398.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A11, full insert sequence Length = 1128 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 711 aggagctcaagctcaaggagatcaagaa 738
>dbj|AK119554.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E06, full insert sequence Length = 1129 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 712 aggagctcaagctcaaggagatcaagaa 739
>dbj|AK106085.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B02, full insert sequence Length = 1198 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 781 aggagctcaagctcaaggagatcaagaa 808
>dbj|AK104557.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-G04, full insert sequence Length = 1112 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 695 aggagctcaagctcaaggagatcaagaa 722
>dbj|AK104535.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-E04, full insert sequence Length = 1148 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 731 aggagctcaagctcaaggagatcaagaa 758
>dbj|AK104522.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E10, full insert sequence Length = 1078 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 712 aggagctcaagctcaaggagatcaagaa 739
>dbj|AK104734.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C11, full insert sequence Length = 1121 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 704 aggagctcaagctcaaggagatcaagaa 731
>dbj|AK104646.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H01, full insert sequence Length = 1127 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 710 aggagctcaagctcaaggagatcaagaa 737
>dbj|AK104636.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D09, full insert sequence Length = 1126 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 709 aggagctcaagctcaaggagatcaagaa 736
>dbj|AK104499.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E04, full insert sequence Length = 1140 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtggggttc 280 |||||| |||||||||||||||||||| |||||||| Sbjct: 667 aacgggaggctggcgatgctggcgttcttggggttc 702
>dbj|AK104469.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D06, full insert sequence Length = 1145 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 728 aggagctcaagctcaaggagatcaagaa 755
>dbj|AK104458.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B05, full insert sequence Length = 1129 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 712 aggagctcaagctcaaggagatcaagaa 739
>dbj|AK104446.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-B11, full insert sequence Length = 1148 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 731 aggagctcaagctcaaggagatcaagaa 758
>dbj|AK104416.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G03, full insert sequence Length = 1177 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtggggttc 280 |||||| |||||||||||||||||||| |||||||| Sbjct: 664 aacgggaggctggcgatgctggcgttcttggggttc 699
>dbj|AK104392.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-H10, full insert sequence Length = 1151 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 734 aggagctcaagctcaaggagatcaagaa 761
>dbj|AK104385.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-E04, full insert sequence Length = 1121 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 712 aggagctcaagctcaaggagatcaagaa 739
>dbj|AK104348.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F11, full insert sequence Length = 1145 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 728 aggagctcaagctcaaggagatcaagaa 755
>dbj|AK104215.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H02, full insert sequence Length = 1129 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 712 aggagctcaagctcaaggagatcaagaa 739
>dbj|AK104096.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-B04, full insert sequence Length = 1129 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 712 aggagctcaagctcaaggagatcaagaa 739
>dbj|AK103921.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B07, full insert sequence Length = 1193 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtggggttc 280 |||||| |||||||||||||||||||| |||||||| Sbjct: 668 aacgggaggctggcgatgctggcgttcttggggttc 703
>dbj|AK068102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130I24, full insert sequence Length = 1017 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 600 aggagctcaagctcaaggagatcaagaa 627
>dbj|AK067809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121A03, full insert sequence Length = 1190 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtggggttc 280 |||||| |||||||||||||||||||| |||||||| Sbjct: 665 aacgggaggctggcgatgctggcgttcttggggttc 700
>dbj|AK067712.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120A20, full insert sequence Length = 1138 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtggggttc 280 |||||| |||||||||||||||||||| |||||||| Sbjct: 667 aacgggaggctggcgatgctggcgttcttggggttc 702
>dbj|AK060970.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D07, full insert sequence Length = 1168 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 751 aggagctcaagctcaaggagatcaagaa 778
>dbj|AK060222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-F08, full insert sequence Length = 1078 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtggggttc 280 |||||| |||||||||||||||||||| |||||||| Sbjct: 672 aacgggaggctggcgatgctggcgttcttggggttc 707
>dbj|AK060143.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A02, full insert sequence Length = 988 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaa 246 |||||||||||||||||||||||||||| Sbjct: 712 aggagctcaagctcaaggagatcaagaa 739
>gb|AF094775.1|AF094775 Oryza sativa chlorophyll a/b-binding protein presursor (Cab27) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1162 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtggggttc 280 |||||| |||||||||||||||||||| |||||||| Sbjct: 630 aacgggaggctggcgatgctggcgttcttggggttc 665
>gb|M12152.1|LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene, complete cds Length = 1913 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 215 ttcgaggagctcaagctcaaggagatcaagaacgggcggctggc 258 |||| |||||| ||| | |||||||||||||||||||||||||| Sbjct: 1352 ttcgcggagctgaaggtgaaggagatcaagaacgggcggctggc 1395
>dbj|AB122115.1| Chlamydomonas reinhardtii LhcI-2 gene for light-harvesting chlorophyll-a/b protein of photosystem I (Type III), complete cds Length = 2389 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaacgg 249 ||||||| ||||||||||||||||||||||| Sbjct: 1906 aggagctgaagctcaaggagatcaagaacgg 1936
>gb|AY112240.1| Zea mays CL187_6 mRNA sequence Length = 770 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 163 gtaccccggcggcgccttcgacccgct 189 ||||||||||||||||||||||||||| Sbjct: 242 gtaccccggcggcgccttcgacccgct 268
>gb|AY105333.1| Zea mays PCO095488 mRNA sequence Length = 794 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgctggcgttcgtggggttctg 282 |||||||||||||||||||||||| || ||||| || ||||| || ||||| Sbjct: 314 caaggagatcaagaacgggcggctcgccatgctcgccttcgtcggcttctg 364
>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 54.0 bits (27), Expect = 5e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 171 gcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagc 230 ||||||||||||||||||||||| || || | ||||| | || |||| ||||||||| Sbjct: 606 gcggcgccttcgacccgctcggcctcgccgacgaccctgacaccttcgccgagctcaagg 665 Query: 231 tcaaggagatcaagaacgg 249 | |||||| |||||||||| Sbjct: 666 tgaaggagctcaagaacgg 684
>gb|AY786530.1| Haematococcus pluvialis chloroplast major light-harvesting complex II protein m9 mRNA, partial cds; nuclear gene for chloroplast product Length = 577 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 221 gagctcaagctcaaggagatcaagaacgggcggctggc 258 ||||| ||| ||||||||||||||||||||||| |||| Sbjct: 287 gagctgaaggtcaaggagatcaagaacgggcggttggc 324
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||| |||||||||||||||| || || | ||||| | |||| |||| Sbjct: 553 taccccggcggcagcttcgacccgctcggcctcgccgacgacccggaggccttcgcggag 612 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 613 ctcaaggtgaaggagatcaagaacgg 638
>gb|AY954734.1| Ostreococcus tauri chloroplast light-harvesting complex I protein precursor Lhca2 gene, complete cds; nuclear gene for chloroplast product Length = 729 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaacgggcg 252 ||||||||||||| |||||||| ||||||||||| Sbjct: 566 aggagctcaagctgaaggagattaagaacgggcg 599
>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091I11, complete sequence Length = 135993 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 233 aaggagatcaagaacgggcggctggc 258 |||||||||||||||||||||||||| Sbjct: 40090 aaggagatcaagaacgggcggctggc 40115
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 233 aaggagatcaagaacgggcggctggc 258 |||||||||||||||||||||||||| Sbjct: 7581004 aaggagatcaagaacgggcggctggc 7581029
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||| |||||||||||||||| || || | ||||| | |||| |||| Sbjct: 66795 taccccggcggcagcttcgacccgctcggcctcgccgacgacccggaggccttcgcggag 66854 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 66855 ctcaaggtgaaggagatcaagaacgg 66880
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||| |||||||||||||||| || || | ||||| | |||| |||| Sbjct: 624 taccccggcggcagcttcgacccgctcggcctcgccgacgacccggaggccttcgcggag 683 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 684 ctcaaggtgaaggagatcaagaacgg 709
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||| |||||||||||||||| || || | ||||| | |||| |||| Sbjct: 623 taccccggcggcagcttcgacccgctcggcctcgccgacgacccggaggccttcgcggag 682 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 683 ctcaaggtgaaggagatcaagaacgg 708
>dbj|AK104824.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F05, full insert sequence Length = 1157 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 233 aaggagatcaagaacgggcggctggc 258 |||||||||||||||||||||||||| Sbjct: 769 aaggagatcaagaacgggcggctggc 794
>dbj|AK098872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B10, full insert sequence Length = 1101 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 233 aaggagatcaagaacgggcggctggc 258 |||||||||||||||||||||||||| Sbjct: 759 aaggagatcaagaacgggcggctggc 784
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||| ||||||| |||||||| || || | ||||||| ||||| ||| Sbjct: 648 taccccggcggcagcttcgactcgctcggcctcgccgacgaccccgaggcgttcgccgag 707 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 708 ctcaaggtgaaggagatcaagaacgg 733
>dbj|AK061619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E02, full insert sequence Length = 650 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||| |||||||||||||||| || || | ||||| | |||| |||| Sbjct: 153 taccccggcggcagcttcgacccgctcggcctcgccgacgacccggaggccttcgcggag 212 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 213 ctcaaggtgaaggagatcaagaacgg 238
>dbj|AK061295.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D05, full insert sequence Length = 1186 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 233 aaggagatcaagaacgggcggctggc 258 |||||||||||||||||||||||||| Sbjct: 770 aaggagatcaagaacgggcggctggc 795
>gb|AF079590.1|AF079590 Sorghum bicolor photosystem II type II chlorophyll a/b binding protein (CABII) mRNA, partial cds Length = 714 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||||| |||||||||||||| || || | ||||||| || || |||| Sbjct: 345 taccccggcggcgcgttcgacccgctcgggctcgccgatgaccccgacaccgccgcggag 404 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | |||||| |||||||||| Sbjct: 405 ctcaaggtgaaggagctcaagaacgg 430
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 233 aaggagatcaagaacgggcggctggc 258 |||||||||||||||||||||||||| Sbjct: 7651091 aaggagatcaagaacgggcggctggc 7651116
>dbj|D85512.1| Oryza sativa (japonica cultivar-group) CP26 mRNA, partial sequence Length = 556 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 233 aaggagatcaagaacgggcggctggc 258 |||||||||||||||||||||||||| Sbjct: 224 aaggagatcaagaacgggcggctggc 249
>ref|XM_482573.1| Oryza sativa (japonica cultivar-group), mRNA Length = 576 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 252 ggctggcgatgctggcgttcgtggggttc 280 |||||||||||||||||||| |||||||| Sbjct: 112 ggctggcgatgctggcgttcttggggttc 84
>ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1062 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 665 caaggagatcaagaacgggcggctcgccatgct 697
>ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1059 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 666 caaggagatcaagaacgggcggctcgccatgct 698
>ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1058 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 668 caaggagatcaagaacgggcggctcgccatgct 700
>ref|XM_478841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1047 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 671 caaggagatcaagaacgggcggctcgccatgct 703
>ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1061 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 671 caaggagatcaagaacgggcggctcgccatgct 703
>ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1065 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 672 caaggagatcaagaacgggcggctcgccatgct 704
>ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1069 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 672 caaggagatcaagaacgggcggctcgccatgct 704
>ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1 mRNA Length = 1068 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 675 caaggagatcaagaacgggcggctcgccatgct 707
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 252 ggctggcgatgctggcgttcgtggggttc 280 |||||||||||||||||||| |||||||| Sbjct: 21164555 ggctggcgatgctggcgttcttggggttc 21164527
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 60437 caaggagatcaagaacgggcggctcgccatgct 60469
>dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C08, full insert sequence Length = 1111 Score = 50.1 bits (25), Expect = 0.008 Identities = 58/69 (84%) Strand = Plus / Plus Query: 178 cttcgacccgctcggcttctccaaggaccccgccaagttcgaggagctcaagctcaagga 237 |||||||||||||||| || || | ||||||| || |||| |||||||| ||||||| Sbjct: 645 cttcgacccgctcggcctcgccgacgaccccgtcaccttcgccaagctcaaggtcaagga 704 Query: 238 gatcaagaa 246 ||||||||| Sbjct: 705 gatcaagaa 713
>dbj|AP005757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0413H11 Length = 147655 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 252 ggctggcgatgctggcgttcgtggggttc 280 |||||||||||||||||||| |||||||| Sbjct: 135765 ggctggcgatgctggcgttcttggggttc 135737
>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08, full insert sequence Length = 1088 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 686 caaggagatcaagaacgggcggctcgccatgct 718
>emb|X64198.1|NTLHC1R N.tabacum LHC-I mRNA for photosystem I light-harvesting chlorophyll a/b-binding protein Length = 845 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 137 atggagaaggacccggagaagaagaagta 165 |||||||||||||| |||||||||||||| Sbjct: 507 atggagaaggaccctgagaagaagaagta 535
>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06, full insert sequence Length = 1069 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 672 caaggagatcaagaacgggcggctcgccatgct 704
>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01, full insert sequence Length = 1065 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 672 caaggagatcaagaacgggcggctcgccatgct 704
>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full insert sequence Length = 1080 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 702 caaggagatcaagaacgggcggctcgccatgct 734
>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02, full insert sequence Length = 1058 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 668 caaggagatcaagaacgggcggctcgccatgct 700
>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10, full insert sequence Length = 1061 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 671 caaggagatcaagaacgggcggctcgccatgct 703
>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05, full insert sequence Length = 1062 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 665 caaggagatcaagaacgggcggctcgccatgct 697
>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03, full insert sequence Length = 1059 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 666 caaggagatcaagaacgggcggctcgccatgct 698
>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06, full insert sequence Length = 1646 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 962 caaggagatcaagaacgggcggctcgccatgct 994
>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01, full insert sequence Length = 1068 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgct 264 |||||||||||||||||||||||| || ||||| Sbjct: 675 caaggagatcaagaacgggcggctcgccatgct 707
>gb|U22329.1|VCU22329 Volvox carteri light harvesting complex a mRNA, complete cds Length = 1085 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcggctggcgatgctggcgttcg 272 |||||||||||||||||| || ||||| |||||||| |||| Sbjct: 662 caaggagatcaagaacggccgcctggccatgctggccttcg 702
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 214 gttcgaggagctcaagctcaaggagatcaagaacgg 249 ||||| |||||||||| | ||||||||||||||||| Sbjct: 681 gttcgcggagctcaaggtgaaggagatcaagaacgg 716
>emb|AJ313013.1|PCO313013 Pinus contorta cab gene for chlorophyll a/b binding protein Length = 1197 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 215 ttcgaggagctcaagctcaaggagatcaagaacgggcggctggc 258 |||| |||||| ||| | ||||||||||||||||||||| |||| Sbjct: 706 ttcgcggagctgaaggtgaaggagatcaagaacgggcggttggc 749
>gb|AY617086.1| Pinus roxburghii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 215 ttcgaggagctcaagctcaaggagatcaagaacgggcggctggc 258 |||| |||||| ||| | ||||||||||||||||||||| |||| Sbjct: 636 ttcgcggagctgaaggtgaaggagatcaagaacgggcggttggc 679
>gb|AY617085.1| Pinus merkusii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 215 ttcgaggagctcaagctcaaggagatcaagaacgggcggctggc 258 |||| |||||| ||| | ||||||||||||||||||||| |||| Sbjct: 636 ttcgcggagctgaaggtgaaggagatcaagaacgggcggttggc 679
>gb|AY617083.1| Pinus radiata chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 215 ttcgaggagctcaagctcaaggagatcaagaacgggcggctggc 258 |||| |||||| ||| | ||||||||||||||||||||| |||| Sbjct: 636 ttcgcggagctgaaggtgaaggagatcaagaacgggcggttggc 679
>gb|AY617082.1| Pinus ponderosa chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 215 ttcgaggagctcaagctcaaggagatcaagaacgggcggctggc 258 |||| |||||| ||| | ||||||||||||||||||||| |||| Sbjct: 636 ttcgcggagctgaaggtgaaggagatcaagaacgggcggttggc 679
>gb|AY617081.1| Pinus echinata chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 762 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 215 ttcgaggagctcaagctcaaggagatcaagaacgggcggctggc 258 |||| |||||| ||| | ||||||||||||||||||||| |||| Sbjct: 636 ttcgcggagctgaaggtgaaggagatcaagaacgggcggttggc 679
>gb|S73603.1| Pinus thunbergii chlorophyll a/b-binding protein (LHCPII) mRNA, complete cds Length = 998 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 215 ttcgaggagctcaagctcaaggagatcaagaacgggcggctggc 258 |||| |||||| ||| | ||||||||||||||||||||| |||| Sbjct: 682 ttcgcggagctgaaggtgaaggagatcaagaacgggcggttggc 725
>dbj|AB050007.2| Chlamydomonas reinhardtii lhcb5 mRNA for CP26, complete cds Length = 952 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Plus Query: 219 aggagctcaagctcaaggagatcaagaacgggcggctggc 258 ||||||| ||| ||||||||||||||||||| || ||||| Sbjct: 732 aggagctgaaggtcaaggagatcaagaacggccgcctggc 771 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 gtaccccggcggcgccttcgaccc 186 ||||||||||||| |||||||||| Sbjct: 676 gtaccccggcggccccttcgaccc 699
>emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b binding (CAB) protein of photosystem II (PSII) Length = 2689 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 223 gctcaagctcaaggagatcaagaacgggcggctggc 258 ||||||| | ||||||||||||||||| |||||||| Sbjct: 2063 gctcaaggtgaaggagatcaagaacggacggctggc 2098
>emb|Z49749.1|PMLHCABBP P.menziesii mRNA for light-harvesting chlorophyll a/b binding protein of photosystem II Length = 772 Score = 48.1 bits (24), Expect = 0.031 Identities = 42/48 (87%) Strand = Plus / Plus Query: 215 ttcgaggagctcaagctcaaggagatcaagaacgggcggctggcgatg 262 |||| |||||| ||| | |||||| | ||||||||||||||||||||| Sbjct: 525 ttcgcggagctgaaggtgaaggagctaaagaacgggcggctggcgatg 572
>emb|X14506.1|PSCABIIB Pinus sylvestris cab II/1B mRNA for chlorophyll a/b-binding protein Length = 1006 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 215 ttcgaggagctcaagctcaaggagatcaagaacgggcggctggc 258 |||| |||||| ||| | ||||||||||||||||||||| |||| Sbjct: 691 ttcgcggagctgaaggtgaaggagatcaagaacgggcggttggc 734
>gb|AF017998.1|AF017998 Tetraselmis sp. RG-15 chlorophyll a/b binding protein (LHCPII) gene, complete cds Length = 2095 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 221 gagctcaagctcaaggagatcaagaacgggcg 252 ||||||||| | |||||||||||||||||||| Sbjct: 1570 gagctcaaggtgaaggagatcaagaacgggcg 1601
>gb|U51633.1|PPU51633 Pinus palustris type 1 light-harvesting chlorophyll a/b-binding polypeptide (Lhcb1) mRNA, partial cds Length = 414 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 215 ttcgaggagctcaagctcaaggagatcaagaacgggcggctggc 258 |||| |||||| ||| | ||||||||||||||||||||| |||| Sbjct: 107 ttcgcggagctgaaggtgaaggagatcaagaacgggcggttggc 150
>gb|U51632.1|PPU51632 Pinus palustris type 2 light-harvesting chlorophyll a/b-binding polypeptide (Lhcb2) mRNA, partial cds Length = 873 Score = 48.1 bits (24), Expect = 0.031 Identities = 39/44 (88%) Strand = Plus / Plus Query: 215 ttcgaggagctcaagctcaaggagatcaagaacgggcggctggc 258 |||| |||||| ||| | |||||||| ||||||||||||||||| Sbjct: 559 ttcgcggagctaaaggtgaaggagataaagaacgggcggctggc 602
>emb|X12861.1|EGLHCI38 Euglena gracilis mRNA fragment for LHCI protein LH38 Length = 1590 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 235 ggagatcaagaacgggcggctggcgatg 262 ||||||||||||||| |||||||||||| Sbjct: 1494 ggagatcaagaacggccggctggcgatg 1521
>gb|AY954736.1| Ostreococcus tauri chloroplast light-harvesting complex I protein precursor Lhca5 gene, complete cds; nuclear gene for chloroplast product Length = 957 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 227 aagctcaaggagatcaagaacgg 249 ||||||||||||||||||||||| Sbjct: 784 aagctcaaggagatcaagaacgg 806
>gb|U23189.1|ZMU23189 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-2) mRNA, complete cds Length = 1073 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 224 ctcaagctcaaggagatcaagaacgggcggctggcgatg 262 |||||| | ||||||||||||||||| ||||| |||||| Sbjct: 701 ctcaaggtgaaggagatcaagaacggccggctcgcgatg 739
>emb|X06602.1|EGLHCPAB Euglena gracilis mRNA for light harvesting chlorophyll a/b protein Length = 681 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 220 ggagctcaagctcaaggagatcaagaacgggcggctggc 258 |||||| ||| | ||||||||||||||||| |||||||| Sbjct: 194 ggagctgaaggtgaaggagatcaagaacggccggctggc 232
>ref|NM_103597.2| Arabidopsis thaliana LHCA5 AT1G45474 (LHCA5) transcript variant AT1G45474.1 mRNA, complete cds Length = 888 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 227 aagctcaaggagatcaagaacgggcggctggcgatgctggcg 268 ||||| ||||||||||||||||| || || |||||| ||||| Sbjct: 634 aagcttaaggagatcaagaacggtcgtctagcgatgatggcg 675
>ref|NM_179447.1| Arabidopsis thaliana LHCA5 AT1G45474 (LHCA5) transcript variant AT1G45474.2 mRNA, complete cds Length = 928 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 227 aagctcaaggagatcaagaacgggcggctggcgatgctggcg 268 ||||| ||||||||||||||||| || || |||||| ||||| Sbjct: 658 aagcttaaggagatcaagaacggtcgtctagcgatgatggcg 699
>ref|NM_188763.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 313 aacgggcggctggcgatggtggggttcgtg 342
>ref|XM_468708.1| Oryza sativa (japonica cultivar-group), mRNA Length = 669 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 292 aacgggcggctggcgatggtggggttcgtg 321
>ref|XM_476845.1| Oryza sativa (japonica cultivar-group), mRNA Length = 564 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 268 aacgggcggctggcgatggtggggttcgtg 297
>ref|XM_476844.1| Oryza sativa (japonica cultivar-group), mRNA Length = 603 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 307 aacgggcggctggcgatggtggggttcgtg 336
>ref|XM_428807.1| PREDICTED: Gallus gallus similar to Transforming acidic coiled-coil-containing protein 1 (LOC431253), mRNA Length = 1404 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 124 gcagcagcgcaccatggagaaggacc 149 |||||||| ||||||||||||||||| Sbjct: 975 gcagcagctcaccatggagaaggacc 1000
>gb|AY646197.1| Chlorella pyrenoidosa chloroplast light-harvesting complex II (Lhc II) mRNA, partial cds; nuclear gene for chloroplast product Length = 537 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 gagctcaagctcaaggagatcaagaacgggcggctggc 258 ||||||||| | ||||||||||||||||| || ||||| Sbjct: 388 gagctcaaggtgaaggagatcaagaacggtcgtctggc 425
>gb|DQ160108.1| Taraxacum officinale TO75-2 (To75-2) mRNA, partial cds Length = 218 Score = 44.1 bits (22), Expect = 0.48 Identities = 109/138 (78%) Strand = Plus / Plus Query: 226 caagctcaaggagatcaagaacgggcggctggcgatgctggcgttcgtggggttctgcgt 285 |||| |||| |||||||||||||| || | || || |||| || ||||| || || || Sbjct: 29 caaggtcaaagagatcaagaacggacgtttagctttgttggcttttgtgggattttgtgt 88 Query: 286 gcagcagtcggcgtaccccggcaccggcccgctggagaacctggccacgcacctcgcgga 345 ||| || ||||||||||| || ||||| || |||||||| |||| || || | || || Sbjct: 89 gcaacaatcggcgtaccctggtaccggacctttggagaacttggcaactcatttggctga 148 Query: 346 cccgtggcacaacaacat 363 ||| |||||||||||||| Sbjct: 149 cccatggcacaacaacat 166
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence Length = 182756 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 25525 aacgggcggctggcgatggtggggttcgtg 25554
>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete sequence Length = 153247 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 39872 aacgggcggctggcgatggtggggttcgtg 39843
>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0004G10 Length = 150379 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 58063 aacgggcggctggcgatggtggggttcgtg 58092
>gb|DQ018375.1| Pinus gerardiana chloroplast putative light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 760 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 215 ttcgaggagctcaagctcaaggagatcaagaacgggcg 252 |||| |||||| ||| | |||||||||||||||||||| Sbjct: 636 ttcgcggagctgaaggtgaaggagatcaagaacgggcg 673
>gb|AY617095.1| Pinus nelsonii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 215 ttcgaggagctcaagctcaaggagatcaagaacgggcg 252 |||| |||||| ||| | |||||||||||||||||||| Sbjct: 636 ttcgcggagctgaaggtgaaggagatcaagaacgggcg 673
>gb|AY617094.1| Pinus longaeva chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 759 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 215 ttcgaggagctcaagctcaaggagatcaagaacgggcg 252 |||| |||||| ||| | |||||||||||||||||||| Sbjct: 625 ttcgcggagctgaaggtgaaggagatcaagaacgggcg 662
>gb|AY617093.1| Pinus remota chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 215 ttcgaggagctcaagctcaaggagatcaagaacgggcg 252 |||| |||||| ||| | |||||||||||||||||||| Sbjct: 636 ttcgcggagctgaaggtgaaggagatcaagaacgggcg 673
>gb|AY617092.1| Pinus monophylla chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 215 ttcgaggagctcaagctcaaggagatcaagaacgggcg 252 |||| |||||| ||| | |||||||||||||||||||| Sbjct: 636 ttcgcggagctgaaggtgaaggagatcaagaacgggcg 673
>gb|AY617084.1| Pinus contorta chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 233 aaggagatcaagaacgggcggctggc 258 ||||||||||||||||||||| |||| Sbjct: 654 aaggagatcaagaacgggcggttggc 679
>gb|AY090263.1| Arabidopsis thaliana At1g45474/F2G19.4 mRNA, complete cds Length = 771 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 227 aagctcaaggagatcaagaacgggcggctggcgatgctggcg 268 ||||| ||||||||||||||||| || || |||||| ||||| Sbjct: 607 aagcttaaggagatcaagaacggtcgtctagcgatgatggcg 648
>gb|AY062097.1| Arabidopsis thaliana At1g45474/F2G19.4 mRNA, complete cds Length = 866 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 227 aagctcaaggagatcaagaacgggcggctggcgatgctggcg 268 ||||| ||||||||||||||||| || || |||||| ||||| Sbjct: 612 aagcttaaggagatcaagaacggtcgtctagcgatgatggcg 653
>dbj|AK221694.1| Arabidopsis thaliana mRNA for light-harvesting complex protein, complete cds, clone: RAFL15-25-F20 Length = 896 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 227 aagctcaaggagatcaagaacgggcggctggcgatgctggcg 268 ||||| ||||||||||||||||| || || |||||| ||||| Sbjct: 636 aagcttaaggagatcaagaacggtcgtctagcgatgatggcg 677
>gb|AY088144.1| Arabidopsis thaliana clone 41745 mRNA, complete sequence Length = 884 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 227 aagctcaaggagatcaagaacgggcggctggcgatgctggcg 268 ||||| ||||||||||||||||| || || |||||| ||||| Sbjct: 635 aagcttaaggagatcaagaacggtcgtctagcgatgatggcg 676
>gb|AF134121.1| Arabidopsis thaliana Lhca5 protein (Lhca5) mRNA, complete cds Length = 955 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 227 aagctcaaggagatcaagaacgggcggctggcgatgctggcg 268 ||||| ||||||||||||||||| || || |||||| ||||| Sbjct: 669 aagcttaaggagatcaagaacggtcgtctagcgatgatggcg 710
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Minus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 84335 aacgggcggctggcgatggtggggttcgtg 84306
>dbj|AP003826.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1361_E02 Length = 100168 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 62160 aacgggcggctggcgatggtggggttcgtg 62189 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 59719 aacgggcggctggcgatggtggggttcgtg 59748
>dbj|AP004068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1611_C08 Length = 135386 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 agctcaagctcaaggagatcaa 243 |||||||||||||||||||||| Sbjct: 28514 agctcaagctcaaggagatcaa 28535
>dbj|AP004058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1353_F08 Length = 101988 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 agctcaagctcaaggagatcaa 243 |||||||||||||||||||||| Sbjct: 98116 agctcaagctcaaggagatcaa 98137
>dbj|AB122119.1| Chlamydomonas reinhardtii LhcI-6 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1664 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 gagctcaagctcaaggagatcaagaacgggcggctggc 258 ||||| ||||| ||||||||||||||||| || ||||| Sbjct: 1307 gagctgaagctgaaggagatcaagaacggccgcctggc 1344
>dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-harvesting chlorophyll-a/b protein of photosystem I, complete cds Length = 1886 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 gagctcaagctcaaggagatcaagaacgggcggctggc 258 ||||||||| | ||||||||||||||||| || ||||| Sbjct: 1401 gagctcaaggttaaggagatcaagaacggccgcctggc 1438
>emb|X67714.1|PCCABA P.contorta cab gene for chlorophyll a/b binding protein Length = 2574 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 233 aaggagatcaagaacgggcggctggc 258 ||||||||||||||||||||| |||| Sbjct: 1802 aaggagatcaagaacgggcggttggc 1827
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggc 193 |||||||||||| | ||||||||||||||| Sbjct: 577 taccccggcggcacgttcgacccgctcggc 606
>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b- binding protein ( LHCP ) Length = 1030 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 gagctcaagctcaaggagatcaagaacgggcggctggc 258 ||||| ||| ||||||||||||||||||| || ||||| Sbjct: 799 gagctgaaggtcaaggagatcaagaacggacgcctggc 836
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 44.1 bits (22), Expect = 0.48 Identities = 31/34 (91%) Strand = Plus / Minus Query: 414 ccgggctgagaggagatcgaggagccggagcgca 447 |||||||| ||||||||||| ||| ||||||||| Sbjct: 3125670 ccgggctgtgaggagatcgacgaggcggagcgca 3125637 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 accggcccgctggagaacct 327 |||||||||||||||||||| Sbjct: 2368824 accggcccgctggagaacct 2368843
>dbj|AK062972.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-E06, full insert sequence Length = 942 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 462 aacgggcggctggcgatggtggggttcgtg 491
>gb|AF017357.1|AF017357 Oryza sativa low molecular early light-inducible protein mRNA, complete cds Length = 883 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 436 aacgggcggctggcgatggtggggttcgtg 465
>gb|AF017356.1|AF017356 Oryza sativa low molecular early light-inducible protein mRNA, complete cds Length = 818 Score = 44.1 bits (22), Expect = 0.48 Identities = 28/30 (93%) Strand = Plus / Plus Query: 245 aacgggcggctggcgatgctggcgttcgtg 274 |||||||||||||||||| ||| ||||||| Sbjct: 372 aacgggcggctggcgatggtggggttcgtg 401
>gb|AF010321.1|AF010321 Oryza sativa photosystem I antenna protein (Lhca) mRNA, complete cds Length = 1066 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 caaggagatcaagaacgggcgg 253 |||||||||||||||||||||| Sbjct: 645 caaggagatcaagaacgggcgg 666
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 44.1 bits (22), Expect = 0.48 Identities = 70/86 (81%) Strand = Plus / Plus Query: 164 taccccggcggcgccttcgacccgctcggcttctccaaggaccccgccaagttcgaggag 223 |||||||||||| || |||||||||||| || || | ||||||| ||||| ||| Sbjct: 607 taccccggcggcagtttagacccgctcggcctcgccgacgaccccgaggcgttcgccgag 666 Query: 224 ctcaagctcaaggagatcaagaacgg 249 |||||| | ||||||||||||||||| Sbjct: 667 ctcaaggtgaaggagatcaagaacgg 692
>gb|M60049.1|DUNCAB D.tertiolecta 28.5-kDa LHCII apoprotein mRNA, complete cds Length = 1041 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 gagctcaagctcaaggagatcaagaacgggcggctggc 258 ||||| ||| ||||||||||||||||||| || ||||| Sbjct: 631 gagctgaaggtcaaggagatcaagaacggccgcctggc 668
>gb|M23531.1|DUNCBP D.salina major chlorophyll binding protein mRNA, complete cds Length = 1240 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 221 gagctcaagctcaaggagatcaagaacgggcggctggc 258 ||||| ||| ||||||||||||||||||| || ||||| Sbjct: 819 gagctgaaggtcaaggagatcaagaacggccgcctggc 856
>gb|AC164646.3| Mus musculus BAC clone RP24-262I1 from chromosome 3, complete sequence Length = 175326 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 atggttttcattcatgtttct 467 ||||||||||||||||||||| Sbjct: 96786 atggttttcattcatgtttct 96766 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,785,999 Number of Sequences: 3902068 Number of extensions: 4785999 Number of successful extensions: 79208 Number of sequences better than 10.0: 340 Number of HSP's better than 10.0 without gapping: 350 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 77429 Number of HSP's gapped (non-prelim): 1748 length of query: 556 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 533 effective length of database: 17,143,297,704 effective search space: 9137377676232 effective search space used: 9137377676232 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
