ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd21o15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome... 86 2e-13
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
3dbj|AK110584.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 2e-13
4gb|AE005085.1| Halobacterium sp. NRC-1 section 116 of 170 of the... 48 0.034
5ref|NM_064022.2| Caenorhabditis elegans B0491.4 (B0491.4) mRNA, ... 46 0.13
6emb|Z49907.1|CEB0491 Caenorhabditis elegans Cosmid B0491, comple... 46 0.13
7ref|NM_191194.1| Oryza sativa (japonica cultivar-group), predic... 44 0.53
8emb|AL935302.7| Zebrafish DNA sequence from clone DKEY-13N1 in l... 44 0.53
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
10dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
11dbj|AK066261.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.53
12ref|XM_639843.1| Dictyostelium discoideum Ras GTPase (DDB0229437... 42 2.1
13gb|AC110175.14| Mus musculus chromosome 12, clone RP23-124B21, c... 42 2.1
14emb|CT010432.7| Mouse DNA sequence from clone RP23-337G13 on chr... 42 2.1
15emb|CT025601.7| Mouse DNA sequence from clone RP23-424B7 on chro... 42 2.1
16gb|AC124537.5| Mus musculus BAC clone RP23-333J6 from chromosome... 42 2.1
17emb|AL096888.30|HSJ902P15 Human DNA sequence from clone RP5-902P... 42 2.1
18emb|BX510364.11| Zebrafish DNA sequence from clone CH211-81A17 i... 42 2.1
19emb|CR559929.5| Zebrafish DNA sequence from clone CH211-235A10 i... 42 2.1
20dbj|AK006388.1| Mus musculus adult male testis cDNA, RIKEN full-... 42 2.1
21gb|AC117075.2| Dictyostelium discoideum chromosome 2 map 5201047... 42 2.1
22dbj|AP001667.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 2.1
23emb|BX001030.7| Zebrafish DNA sequence from clone CH211-234P6 in... 42 2.1
24dbj|AP000962.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 42 2.1
25gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
26gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
27gb|AC012162.11| Drosophila melanogaster clone BACR01N10, complet... 40 8.3
28gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 8.3
29gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
30gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
31gb|AC157024.7| Mus musculus 6 BAC RP24-549F4 (Roswell Park Cance... 40 8.3
32gb|AC146172.2| Pan troglodytes BAC clone RP43-24M4 from 7, compl... 40 8.3
33gb|AC018647.5| Homo sapiens chromosome 7 clone RP11-379H18, comp... 40 8.3
34emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome... 40 8.3
35emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 8.3
36emb|AL591981.1| Listeria monocytogenes strain EGD, complete geno... 40 8.3
37emb|BX571738.12| Zebrafish DNA sequence from clone CH211-64K10 i... 40 8.3
38emb|CR751234.13| Zebrafish DNA sequence from clone DKEY-164M14 i... 40 8.3
39gb|AC154393.8| Mus musculus chromosome 1, clone RP23-64O1, compl... 40 8.3
40gb|AC007551.1| Homo sapiens clone RP11-239C9 from 7p14-15, compl... 40 8.3
41gb|AC119151.1| Homo sapiens chromosome 5 clone CTD-2582L22, comp... 40 8.3
42gb|AC012161.8|AC012161 Drosophila melanogaster, chromosome X, re... 40 8.3
43gb|AC011703.8|AC011703 Drosophila melanogaster, chromosome X, re... 40 8.3
44gb|AC011702.10|AC011702 Drosophila melanogaster, chromosome X, r... 40 8.3
45dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
46dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 8.3
47dbj|AP006177.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
48emb|BX678769.4| Mouse DNA sequence from clone RP23-435C20 on chr... 40 8.3
49dbj|BS000028.1| Pan troglodytes chromosome 22 clone:PTB-087F19, ... 40 8.3
50gb|AE003506.3| Drosophila melanogaster chromosome X, section 58 ... 40 8.3
51emb|BX072581.5| Zebrafish DNA sequence from clone DKEY-14K7 in l... 40 8.3
52emb|CR354605.8| Zebrafish DNA sequence from clone DKEY-5I9 in li... 40 8.3 
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04,
             complete sequence
          Length = 169073

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                         
Query: 127   gcagcgcaggttcatggcctccatgctgacgctcgacttcggcggccggagcgccgtgga 186
             ||||| || ||||| ||| |||||||| |||||||||||||||||||||| |||||||||
Sbjct: 92942 gcagcccaagttcagggcgtccatgctcacgctcgacttcggcggccggaccgccgtgga 92883

                        
Query: 187   ggtcgcgtgag 197
             ||||| |||||
Sbjct: 92882 ggtcgtgtgag 92872



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 57/62 (91%), Gaps = 1/62 (1%)
 Strand = Plus / Minus

                                                                         
Query: 8     tgcacatggcgccatggnaggaagcgccggtacatggaggccaagtggctcggcacgccg 67
             ||||||||||||| ||| |||||||  ||||||||||||||||||||||||| |||||||
Sbjct: 93102 tgcacatggcgccctgg-aggaagcagcggtacatggaggccaagtggctcgccacgccg 93044

               
Query: 68    ga 69
             ||
Sbjct: 93043 ga 93042
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                            
Query: 127      gcagcgcaggttcatggcctccatgctgacgctcgacttcggcggccggagcgccgtgga 186
                ||||| || ||||| ||| |||||||| |||||||||||||||||||||| |||||||||
Sbjct: 25576535 gcagcccaagttcagggcgtccatgctcacgctcgacttcggcggccggaccgccgtgga 25576476

                           
Query: 187      ggtcgcgtgag 197
                ||||| |||||
Sbjct: 25576475 ggtcgtgtgag 25576465



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 57/62 (91%), Gaps = 1/62 (1%)
 Strand = Plus / Minus

                                                                            
Query: 8        tgcacatggcgccatggnaggaagcgccggtacatggaggccaagtggctcggcacgccg 67
                ||||||||||||| ||| |||||||  ||||||||||||||||||||||||| |||||||
Sbjct: 25576695 tgcacatggcgccctgg-aggaagcagcggtacatggaggccaagtggctcgccacgccg 25576637

                  
Query: 68       ga 69
                ||
Sbjct: 25576636 ga 25576635



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 243      atatataaaaacatttgaat 262
                ||||||||||||||||||||
Sbjct: 26461397 atatataaaaacatttgaat 26461378



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 244      tatataaaaacatttgaatt 263
                ||||||||||||||||||||
Sbjct: 26211220 tatataaaaacatttgaatt 26211239



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 243      atatataaaaacatttgaattgaa 266
                ||||||||||| ||||||||||||
Sbjct: 25926778 atatataaaaatatttgaattgaa 25926801
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>dbj|AK110584.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-E12, full
            insert sequence
          Length = 1293

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                        
Query: 127  gcagcgcaggttcatggcctccatgctgacgctcgacttcggcggccggagcgccgtgga 186
            ||||| || ||||| ||| |||||||| |||||||||||||||||||||| |||||||||
Sbjct: 942  gcagcccaagttcagggcgtccatgctcacgctcgacttcggcggccggaccgccgtgga 1001

                       
Query: 187  ggtcgcgtgag 197
            ||||| |||||
Sbjct: 1002 ggtcgtgtgag 1012



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 57/62 (91%), Gaps = 1/62 (1%)
 Strand = Plus / Plus

                                                                       
Query: 8   tgcacatggcgccatggnaggaagcgccggtacatggaggccaagtggctcggcacgccg 67
           ||||||||||||| ||| |||||||  ||||||||||||||||||||||||| |||||||
Sbjct: 782 tgcacatggcgccctgg-aggaagcagcggtacatggaggccaagtggctcgccacgccg 840

             
Query: 68  ga 69
           ||
Sbjct: 841 ga 842
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>gb|AE005085.1| Halobacterium sp. NRC-1 section 116 of 170 of the complete genome
          Length = 14152

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 164 ttcggcggccggagcgccgtggag 187
           ||||||||||||||||||||||||
Sbjct: 704 ttcggcggccggagcgccgtggag 727
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>ref|NM_064022.2| Caenorhabditis elegans B0491.4 (B0491.4) mRNA, complete cds
          Length = 1522

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 255 atttgaattgaattctcgcgtag 277
           |||||||||||||||||||||||
Sbjct: 496 atttgaattgaattctcgcgtag 474
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>emb|Z49907.1|CEB0491 Caenorhabditis elegans Cosmid B0491, complete sequence
          Length = 38240

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 255   atttgaattgaattctcgcgtag 277
             |||||||||||||||||||||||
Sbjct: 14534 atttgaattgaattctcgcgtag 14556
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>ref|NM_191194.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 804

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 37  gtacatggaggccaagtggctcggcacgcc 66
           ||||||| || |||||||||||||||||||
Sbjct: 654 gtacatgcagtccaagtggctcggcacgcc 683
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>emb|AL935302.7| Zebrafish DNA sequence from clone DKEY-13N1 in linkage group 15, complete
              sequence
          Length = 152706

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 243    atatataaaaacatttgaattg 264
              ||||||||||||||||||||||
Sbjct: 101693 atatataaaaacatttgaattg 101672
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 37       gtacatggaggccaagtggctcggcacgcc 66
                ||||||| || |||||||||||||||||||
Sbjct: 31267245 gtacatgcagtccaagtggctcggcacgcc 31267274
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>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0481E12
          Length = 161563

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 37    gtacatggaggccaagtggctcggcacgcc 66
             ||||||| || |||||||||||||||||||
Sbjct: 21528 gtacatgcagtccaagtggctcggcacgcc 21557
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>dbj|AK066261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059N14, full
            insert sequence
          Length = 2042

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 37   gtacatggaggccaagtggctcggcacgcc 66
            ||||||| || |||||||||||||||||||
Sbjct: 1654 gtacatgcagtccaagtggctcggcacgcc 1683
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>ref|XM_639843.1| Dictyostelium discoideum Ras GTPase (DDB0229437), partial mRNA
          Length = 618

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 239 atacatatataaaaacatttgaatt 263
           ||||||||| |||||||||||||||
Sbjct: 170 atacatatacaaaaacatttgaatt 194
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>gb|AC110175.14| Mus musculus chromosome 12, clone RP23-124B21, complete sequence
          Length = 242870

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 239    atacatatataaaaacatttg 259
              |||||||||||||||||||||
Sbjct: 183807 atacatatataaaaacatttg 183787
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>emb|CT010432.7| Mouse DNA sequence from clone RP23-337G13 on chromosome 12, complete
              sequence
          Length = 207186

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 239    atacatatataaaaacatttg 259
              |||||||||||||||||||||
Sbjct: 112971 atacatatataaaaacatttg 112991
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>emb|CT025601.7| Mouse DNA sequence from clone RP23-424B7 on chromosome 17, complete
             sequence
          Length = 197841

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 400   cagtgcaggtgctggttcatttacc 424
             ||||| |||||||||||||||||||
Sbjct: 45531 cagtggaggtgctggttcatttacc 45555
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>gb|AC124537.5| Mus musculus BAC clone RP23-333J6 from chromosome 13, complete sequence
          Length = 186870

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 78     tgccggccgccggcgcccccg 98
              |||||||||||||||||||||
Sbjct: 118549 tgccggccgccggcgcccccg 118529
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>emb|AL096888.30|HSJ902P15 Human DNA sequence from clone RP5-902P15 on chromosome 1p31.3-32.2
             Contains the 3' end of the NFIA gene for nuclear factor
             I/A, complete sequence
          Length = 123391

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 238   aatacatatataaaaacattt 258
             |||||||||||||||||||||
Sbjct: 51423 aatacatatataaaaacattt 51443
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>emb|BX510364.11| Zebrafish DNA sequence from clone CH211-81A17 in linkage group 12,
             complete sequence
          Length = 120324

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 238   aatacatatataaaaacattt 258
             |||||||||||||||||||||
Sbjct: 58799 aatacatatataaaaacattt 58779
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>emb|CR559929.5| Zebrafish DNA sequence from clone CH211-235A10 in linkage group 13,
            complete sequence
          Length = 59815

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 238  aatacatatataaaaacattt 258
            |||||||||||||||||||||
Sbjct: 7266 aatacatatataaaaacattt 7246
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>dbj|AK006388.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
          library, clone:1700026J04 product:hypothetical protein,
          full insert sequence
          Length = 1812

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 78 tgccggccgccggcgcccccg 98
          |||||||||||||||||||||
Sbjct: 38 tgccggccgccggcgcccccg 18
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>gb|AC117075.2| Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4,
             complete sequence
          Length = 254733

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 239   atacatatataaaaacatttgaatt 263
             ||||||||| |||||||||||||||
Sbjct: 10896 atacatatacaaaaacatttgaatt 10872
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>dbj|AP001667.1| Homo sapiens genomic DNA, chromosome 21q, section 11/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 243    atatataaaaacatttgaatt 263
              |||||||||||||||||||||
Sbjct: 151841 atatataaaaacatttgaatt 151821
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>emb|BX001030.7| Zebrafish DNA sequence from clone CH211-234P6 in linkage group 24,
              complete sequence
          Length = 156560

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 245    atataaaaacatttgaattga 265
              |||||||||||||||||||||
Sbjct: 142634 atataaaaacatttgaattga 142654
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>dbj|AP000962.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B821P16,
             LL56-APP region, complete sequence
          Length = 185300

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 243   atatataaaaacatttgaatt 263
             |||||||||||||||||||||
Sbjct: 83385 atatataaaaacatttgaatt 83365
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>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075A10,
              complete sequence
          Length = 171101

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 243    atatataaaaacatttgaattgaa 266
              ||||||||||| ||||||||||||
Sbjct: 168310 atatataaaaatatttgaattgaa 168333
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>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11,
             complete sequence
          Length = 112065

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 243   atatataaaaacatttgaattgaa 266
             ||||||||||| ||||||||||||
Sbjct: 31006 atatataaaaatatttgaattgaa 31029
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>gb|AC012162.11| Drosophila melanogaster clone BACR01N10, complete sequence
          Length = 169856

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    atacatatataaaaacattt 258
              ||||||||||||||||||||
Sbjct: 145032 atacatatataaaaacattt 145013
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 84      ccgccggcgcccccgttacggccg 107
               ||||||||||||||||||| ||||
Sbjct: 4023866 ccgccggcgcccccgttaccgccg 4023889
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>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0053E05, complete sequence
          Length = 196284

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   tatataaaaacatttgaatt 263
             ||||||||||||||||||||
Sbjct: 62268 tatataaaaacatttgaatt 62287
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>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01,
              complete sequence
          Length = 147704

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    atatataaaaacatttgaat 262
              ||||||||||||||||||||
Sbjct: 106088 atatataaaaacatttgaat 106069
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>gb|AC157024.7| Mus musculus 6 BAC RP24-549F4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 165219

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    atacatatataaaaacattt 258
              ||||||||||||||||||||
Sbjct: 114986 atacatatataaaaacattt 115005
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>gb|AC146172.2| Pan troglodytes BAC clone RP43-24M4 from 7, complete sequence
          Length = 223283

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    aaaaacatttgaattgaatt 268
              ||||||||||||||||||||
Sbjct: 206929 aaaaacatttgaattgaatt 206910
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>gb|AC018647.5| Homo sapiens chromosome 7 clone RP11-379H18, complete sequence
          Length = 160732

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   aaaaacatttgaattgaatt 268
             ||||||||||||||||||||
Sbjct: 21204 aaaaacatttgaattgaatt 21185
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>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13
          Length = 349606

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 84     ccgccggcgcccccgttacggccg 107
              ||||||||||||||||||| ||||
Sbjct: 214550 ccgccggcgcccccgttaccgccg 214573
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>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14
          Length = 316050

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 84     ccgccggcgcccccgttacggccg 107
              ||||||||||||||||||| ||||
Sbjct: 223941 ccgccggcgcccccgttaccgccg 223964
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>emb|AL591981.1| Listeria monocytogenes strain EGD, complete genome, segment 9/12
          Length = 347050

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 560    gtacttgtttccagccgaaa 579
              ||||||||||||||||||||
Sbjct: 337100 gtacttgtttccagccgaaa 337119
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>emb|BX571738.12| Zebrafish DNA sequence from clone CH211-64K10 in linkage group 16,
              complete sequence
          Length = 141217

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 242    catatataaaaacatttgaa 261
              ||||||||||||||||||||
Sbjct: 106852 catatataaaaacatttgaa 106833
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>emb|CR751234.13| Zebrafish DNA sequence from clone DKEY-164M14 in linkage group 20
             Contains the gene for a novel protein similar to
             vertebrate bromodomain containing 1 (BRD1), the gene for a
             novel protein similar to vertebrate asparagine-linked
             glycosylation 12 homolog (yeast,
             alpha-1,6-mannosyltransferase) (ALG12), the gene for a
             novel protein similar to vertebrate solute carrier family
             6 (neurotransmitter transporter, GABA), member 1 (SLC6A1),
             the gene for a novel protein similar to vertebrate zinc
             finger, BED domain containing 4 (ZBED4), the gene for a
             novel protein similar to vertebrate cysteine-rich with
             EGF-like domains 1 (CRELD1) (zgc:66383) and three CpG
             islands, complete sequence
          Length = 218596

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 240   tacatatataaaaacatttgaatt 263
             |||||| |||||||||||||||||
Sbjct: 42643 tacataaataaaaacatttgaatt 42620
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>gb|AC154393.8| Mus musculus chromosome 1, clone RP23-64O1, complete sequence
          Length = 253733

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   atacatatataaaaacattt 258
             ||||||||||||||||||||
Sbjct: 79982 atacatatataaaaacattt 79963
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>gb|AC007551.1| Homo sapiens clone RP11-239C9 from 7p14-15, complete sequence
          Length = 155401

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   aaaaacatttgaattgaatt 268
             ||||||||||||||||||||
Sbjct: 26891 aaaaacatttgaattgaatt 26910
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>gb|AC119151.1| Homo sapiens chromosome 5 clone CTD-2582L22, complete sequence
          Length = 176204

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 242    catatataaaaacatttgaa 261
              ||||||||||||||||||||
Sbjct: 132774 catatataaaaacatttgaa 132755
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>gb|AC012161.8|AC012161 Drosophila melanogaster, chromosome X, region 16B-16D, BAC clone
              BACR01I22, complete sequence
          Length = 173281

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    atacatatataaaaacattt 258
              ||||||||||||||||||||
Sbjct: 108495 atacatatataaaaacattt 108514
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>gb|AC011703.8|AC011703 Drosophila melanogaster, chromosome X, region 16A-16B, BAC clone
              BACR35P18, complete sequence
          Length = 163307

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    atacatatataaaaacattt 258
              ||||||||||||||||||||
Sbjct: 144830 atacatatataaaaacattt 144849
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>gb|AC011702.10|AC011702 Drosophila melanogaster, chromosome X, region 15F-16A, BAC clone
              BACR42I14, complete sequence
          Length = 167688

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    atacatatataaaaacattt 258
              ||||||||||||||||||||
Sbjct: 158476 atacatatataaaaacattt 158495
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 515      aaaatccggttgtatttctt 534
                ||||||||||||||||||||
Sbjct: 11930848 aaaatccggttgtatttctt 11930867
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 46     ggccaagtggctcggcacgccgga 69
              ||||||| ||||||||||||||||
Sbjct: 638266 ggccaagcggctcggcacgccgga 638289
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>dbj|AP006177.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0734C01
          Length = 163208

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 515   aaaatccggttgtatttctt 534
             ||||||||||||||||||||
Sbjct: 90203 aaaatccggttgtatttctt 90222
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>emb|BX678769.4| Mouse DNA sequence from clone RP23-435C20 on chromosome X, complete
             sequence
          Length = 205524

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   gaatacatatataaaaacat 256
             ||||||||||||||||||||
Sbjct: 28498 gaatacatatataaaaacat 28517
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>dbj|BS000028.1| Pan troglodytes chromosome 22 clone:PTB-087F19, map 22, complete
             sequences
          Length = 223409

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   tatataaaaacatttgaatt 263
             ||||||||||||||||||||
Sbjct: 55668 tatataaaaacatttgaatt 55649
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>gb|AE003506.3| Drosophila melanogaster chromosome X, section 58 of 74 of the complete
              sequence
          Length = 302073

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    atacatatataaaaacattt 258
              ||||||||||||||||||||
Sbjct: 179672 atacatatataaaaacattt 179691
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>emb|BX072581.5| Zebrafish DNA sequence from clone DKEY-14K7 in linkage group 7, complete
              sequence
          Length = 239497

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    atgaccacgaatacatatat 248
              ||||||||||||||||||||
Sbjct: 226144 atgaccacgaatacatatat 226163
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>emb|CR354605.8| Zebrafish DNA sequence from clone DKEY-5I9 in linkage group 14,
             complete sequence
          Length = 196530

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   aatacatatataaaaacatt 257
             ||||||||||||||||||||
Sbjct: 79992 aatacatatataaaaacatt 80011


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,241,577
Number of Sequences: 3902068
Number of extensions: 5241577
Number of successful extensions: 101221
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100802
Number of HSP's gapped (non-prelim): 419
length of query: 607
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 584
effective length of database: 17,143,297,704
effective search space: 10011685859136
effective search space used: 10011685859136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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