>ARFP_ARATH (Q93YR9) Auxin response factor 16|
          Length = 670

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
 Frame = +1

Query: 115 CMLTIGNHQNNKKSDVKKASPQLMLFGKPILTEQQITLGNSRGFSPSAARKSTSDMSAEK 294
           C LT+G    N   D K     ++LFGK IL E+Q++            + ST   + EK
Sbjct: 500 CFLTMGTTPCN---DTKSKKSHIVLFGKLILPEEQLS-----------EKGSTDTANIEK 545

Query: 295 SANNSDIPSPQSNQNGTM-KNLSCGGVPLCQDNKVLDL-GLDIGHCKIFMQS 444
           +     I S  SNQNG   +  S          KV D  GL+ GHCK+FM+S
Sbjct: 546 T----QISSGGSNQNGVAGREFSSSDEGSPCSKKVHDASGLETGHCKVFMES 593

>ARFJ_ARATH (Q9SKN5) Auxin response factor 10|
          Length = 693

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 8/127 (6%)
 Frame = +1

Query: 88  HQSAQD-----DISCMLTIGNH---QNNKKSDVKKASPQLMLFGKPILTEQQITLGNSRG 243
           H  A+D     +ISC LT+GN    Q+ KKS     + Q +LFG+PILTEQQ+ +   R 
Sbjct: 493 HYQARDSENSNNISCSLTMGNPAMVQDKKKSVGSVKTHQFVLFGQPILTEQQV-MNRKRF 551

Query: 244 FSPSAARKSTSDMSAEKSANNSDIPSPQSNQNGTMKNLSCGGVPLCQDNKVLDLGLDIGH 423
               A  +    + A     N  +                              GL+ GH
Sbjct: 552 LEEEAEAEEEKGLVARGLTWNYSLQ-----------------------------GLETGH 582

Query: 424 CKIFMQS 444
           CK+FM+S
Sbjct: 583 CKVFMES 589



 Score = 29.3 bits (64), Expect = 4.6
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
 Frame = +1

Query: 118 MLTIGNHQNNKKSDVKKASPQLMLFGKP---ILTEQQIT--LGNSRGFSPSAARKSTSDM 282
           M  + N  NN  + ++ A     LFG P   +L++  ++   GN++  SP+    S +  
Sbjct: 431 MCYLSNDNNNAPAGIQGARQAQQLFGSPSPSLLSDLNLSSYTGNNKLHSPAMFLSSFNPR 490

Query: 283 SAEKSANNSDIPSPQSNQNGTMKNLSCGGVPLCQDNK 393
                A +S+      N N    +L+ G   + QD K
Sbjct: 491 HHHYQARDSE------NSNNISCSLTMGNPAMVQDKK 521

>ROX1_YEAST (P25042) ROX1 repressor (Hypoxic function repressor)|
           (Heme-dependent repression factor)
          Length = 368

 Score = 32.7 bits (73), Expect = 0.42
 Identities = 21/89 (23%), Positives = 40/89 (44%)
 Frame = +1

Query: 139 QNNKKSDVKKASPQLMLFGKPILTEQQITLGNSRGFSPSAARKSTSDMSAEKSANNSDIP 318
           Q  ++   K++ PQL    +P      + +  +   SPS++  S++    + + +   +P
Sbjct: 107 QQKEQQQQKQSQPQLQ---QPF-NNNIVLMKRAHSLSPSSSVSSSNSYQFQLNNDLKRLP 162

Query: 319 SPQSNQNGTMKNLSCGGVPLCQDNKVLDL 405
            P  N +  M + S  G+PL  D    DL
Sbjct: 163 IPSVNTSNYMVSRSLSGLPLTHDKTARDL 191

>MDHC_FELCA (Q7YRU4) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic|
           malate dehydrogenase)
          Length = 333

 Score = 32.0 bits (71), Expect = 0.71
 Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
 Frame = +1

Query: 31  LHQVDHGGQQRIAAGLIIGHQSAQDDISCMLTIGNHQNNKKSDVKKASPQLMLFGKPI-- 204
           L ++DH    R  A + +      DD+  ++  GNH + +  DV  A  ++ L GK +  
Sbjct: 154 LTRLDHN---RAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVSHA--KVKLHGKEVGV 208

Query: 205 ---------LTEQQITLGNSRGFSPSAARKSTSDMSAEKS 297
                    L  + IT    RG +   ARK +S MSA K+
Sbjct: 209 YDALKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKA 248

>MDHC_XENLA (Q6PAB3) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic|
           malate dehydrogenase)
          Length = 334

 Score = 31.6 bits (70), Expect = 0.93
 Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 11/100 (11%)
 Frame = +1

Query: 31  LHQVDHGGQQRIAAGLIIGHQSAQDDISCMLTIGNHQNNKKSDVKKASPQLMLFGKPI-- 204
           L ++DH    R  A + +    A DD+  ++  GNH + +  D   AS  + L GK +  
Sbjct: 155 LTRLDHN---RAKAQIALKLNVASDDVKNVIIWGNHSSTQYPDASHAS--VTLQGKDVGA 209

Query: 205 ---------LTEQQITLGNSRGFSPSAARKSTSDMSAEKS 297
                    L    IT    RG +   ARK +S MSA K+
Sbjct: 210 FEAVKNDDWLKGGFITTVQQRGAAVIKARKLSSAMSAAKA 249

>MDHC_BOVIN (Q3T145) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic|
           malate dehydrogenase)
          Length = 333

 Score = 31.6 bits (70), Expect = 0.93
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 11/100 (11%)
 Frame = +1

Query: 31  LHQVDHGGQQRIAAGLIIGHQSAQDDISCMLTIGNHQNNKKSDVKKASPQLMLFGKPI-- 204
           L ++DH    R  A + +      DD+  ++  GNH + +  DV  A  +L   GK +  
Sbjct: 154 LTRLDHN---RAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQ--GKEVGV 208

Query: 205 ---------LTEQQITLGNSRGFSPSAARKSTSDMSAEKS 297
                    L  + IT    RG +   ARK +S MSA K+
Sbjct: 209 YEALKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKA 248

>MDHC_XENTR (Q6DIY9) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic|
           malate dehydrogenase)
          Length = 334

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 11/100 (11%)
 Frame = +1

Query: 31  LHQVDHGGQQRIAAGLIIGHQSAQDDISCMLTIGNHQNNKKSDVKKASPQLMLFGKPI-- 204
           L ++DH    R    + +    A DD+  ++  GNH + +  D   A+  L   GK +  
Sbjct: 155 LTRLDHN---RAKGQIALKLNVASDDVKNVIIWGNHSSTQYPDASHATVNLQ--GKDVGA 209

Query: 205 ---------LTEQQITLGNSRGFSPSAARKSTSDMSAEKS 297
                    L  + IT    RG +   ARK +S MSA K+
Sbjct: 210 FEAVKNDDWLKGEFITTVQQRGAAVIKARKLSSAMSAAKA 249

>MDHC_RAT (O88989) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic|
           malate dehydrogenase)
          Length = 333

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
 Frame = +1

Query: 103 DDISCMLTIGNHQNNKKSDVKKASPQLMLFGKPI-----------LTEQQITLGNSRGFS 249
           DD+  ++  GNH + +  DV  A  +L   GK +           L  + IT    RG +
Sbjct: 175 DDVKNVIIWGNHSSTQYPDVNHAKVKLQ--GKEVGVYEALKDDSWLKGEFITTVQQRGAA 232

Query: 250 PSAARKSTSDMSAEKSANN 306
              ARK +S MSA K+ ++
Sbjct: 233 VIKARKLSSAMSAAKAISD 251

>Y674_TREPA (O83680) Hypothetical protein TP0674|
          Length = 202

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -3

Query: 285 AHIRGALPSSRWRETPRVT*SDLLLSEYGLSKEHQLG 175
           A  RGALPSS+    PRV+  ++ L+ YGL  +   G
Sbjct: 48  ARRRGALPSSQAAAAPRVSLMEVALARYGLFDKDAAG 84

>MDHC_MESCR (O24047) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37)|
          Length = 332

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
 Frame = +1

Query: 106 DISCMLTIGNHQNNKKSDVKKASPQLMLFGKPI---------LTEQQITLGNSRGFSPSA 258
           D+  ++  GNH + +  DV  A+ +     KP+         L  + IT    RG +   
Sbjct: 178 DVKNVIIWGNHSSTQYPDVNHATVKTQGVDKPVRELVADDAWLNGEFITTVQQRGAAIIK 237

Query: 259 ARKSTSDMSAEKSA 300
           ARK +S +SA  SA
Sbjct: 238 ARKLSSALSAASSA 251

>MDHC_MAIZE (Q08062) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37)|
          Length = 332

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
 Frame = +1

Query: 106 DISCMLTIGNHQNNKKSDVKKASPQLMLFGKPI---------LTEQQITLGNSRGFSPSA 258
           D+  ++  GNH +++  DV  A+ +     KP+         L  + IT    RG +   
Sbjct: 178 DVKNVIIWGNHSSSQYPDVNHATVKTSTGEKPVRELVSDDEWLNGEFITTVQQRGAAIIK 237

Query: 259 ARKSTSDMSAEKSA 300
           ARK +S +SA  SA
Sbjct: 238 ARKFSSALSAASSA 251

>KOE5_YEAST (Q08217) Probable serine/threonine-protein kinase YOL045W (EC|
           2.7.11.1)
          Length = 1101

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
 Frame = +1

Query: 199 PILTEQQITLGNSRGFSPSAARKSTS-------------DMSAEKSANNSDIPSPQSNQN 339
           P+L E +I +  SRG S ++++KS+               +S+ ++ +NSD     +  N
Sbjct: 668 PMLKENEIDVVGSRGSSSASSKKSSEKIPVNTLKAMADLSISSAETISNSDDEVDLNQVN 727

Query: 340 GTMKNLSCGGVPLCQDN 390
             ++  SCG V   + N
Sbjct: 728 EKLRETSCGKVRGIESN 744

>MDHC_MOUSE (P14152) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic|
           malate dehydrogenase)
          Length = 333

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
 Frame = +1

Query: 103 DDISCMLTIGNHQNNKKSDVKKASPQLMLFGKPI-----------LTEQQITLGNSRGFS 249
           DD+  ++  GNH + +  DV  A  +L   GK +           L  + IT    RG +
Sbjct: 175 DDVKNVIIWGNHSSTQYPDVNHAKVKLQ--GKEVGVYEALKDDSWLKGEFITTVQQRGAA 232

Query: 250 PSAARKSTSDMSAEKS 297
              ARK +S MSA K+
Sbjct: 233 VIKARKLSSAMSAAKA 248

>SCM_DROME (Q9VHA0) Polycomb protein Scm (Sex comb on midleg protein)|
          Length = 877

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
 Frame = +1

Query: 142 NNKKSDVKKASPQLMLFGKPILTEQQITLGNSRGFSPSA-------ARKSTSDMSAEKSA 300
           + K+   + A+P       P+L +++    NS   SPS        A KS  +  ++ S 
Sbjct: 536 SRKRQLTQSATPP----SSPVLADKRNRQSNSATTSPSEKIIKQELAVKSPVESKSKTST 591

Query: 301 NNSDIPSPQSNQNGTMKN 354
           NN   P+ Q N N ++ N
Sbjct: 592 NNGKEPASQQNSNHSLNN 609

>CAPON_DROME (Q8SXX4) Capon-like protein|
          Length = 698

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 18/70 (25%), Positives = 30/70 (42%)
 Frame = +1

Query: 205 LTEQQITLGNSRGFSPSAARKSTSDMSAEKSANNSDIPSPQSNQNGTMKNLSCGGVPLCQ 384
           LT   +   N   F+ S++      +S E++ NN +     +  NG +  L+CGG    +
Sbjct: 535 LTPSPLGTMNRNSFAGSSSLNEDIRLSIEQNLNNLEEQLKAAVSNGNLAGLACGGSTSTR 594

Query: 385 DNKVLDLGLD 414
           D       LD
Sbjct: 595 DTSRSSSTLD 604

>CNTP2_PONPY (Q5RD64) Contactin-associated protein-like 2 precursor|
          Length = 1331

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
 Frame = +1

Query: 154  SDVKKASPQLMLFGKPILT---EQQITLGNSRGFSPSAARKSTSDMSAEKSANNSDIPSP 324
            SD    SP+ +  GK I T   +Q+I   N+ GF+   +R   + ++  K+A      S 
Sbjct: 1142 SDTLFNSPKSLFLGKVIETGKIDQEIHKYNTPGFTGCLSRVQFNQIAPLKAALRQTNASA 1201

Query: 325  QSNQNGTMKNLSCGGVPL 378
              +  G +   +CG  PL
Sbjct: 1202 HVHIQGELVESNCGASPL 1219

>CNTP2_HUMAN (Q9UHC6) Contactin-associated protein-like 2 precursor (Cell|
            recognition molecule Caspr2)
          Length = 1331

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
 Frame = +1

Query: 154  SDVKKASPQLMLFGKPILT---EQQITLGNSRGFSPSAARKSTSDMSAEKSANNSDIPSP 324
            SD    SP+ +  GK I T   +Q+I   N+ GF+   +R   + ++  K+A      S 
Sbjct: 1142 SDTLFNSPKSLFLGKVIETGKIDQEIHKYNTPGFTGCLSRVQFNQIAPLKAALRQTNASA 1201

Query: 325  QSNQNGTMKNLSCGGVPL 378
              +  G +   +CG  PL
Sbjct: 1202 HVHIQGELVESNCGASPL 1219

>POM1_SCHPO (Q09690) Dual specificity protein kinase pom1 (EC 2.7.12.1)|
          Length = 1087

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 21/86 (24%), Positives = 35/86 (40%)
 Frame = +1

Query: 88  HQSAQDDISCMLTIGNHQNNKKSDVKKASPQLMLFGKPILTEQQITLGNSRGFSPSAARK 267
           HQ  + +IS  LT  + ++   S ++        F K +    QITL N +        +
Sbjct: 284 HQHPKANISGSLTKSSSESKNLSTIQSPLKTSNSFFKELSPHSQITLSNVKNNHSHVGSQ 343

Query: 268 STSDMSAEKSANNSDIPSPQSNQNGT 345
           + S   A  S  +++ P    N N T
Sbjct: 344 TKSHSFATPSVFDNNKPVSSDNHNNT 369

>MDHC_PIG (P11708) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic|
           malate dehydrogenase)
          Length = 333

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
 Frame = +1

Query: 31  LHQVDHGGQQRIAAGLIIGHQSAQDDISCMLTIGNHQNNKKSDVKKASPQLMLFGKPI-- 204
           L ++DH    R  A + +      DD+  ++  GNH + +  DV  A  +L      +  
Sbjct: 154 LTRLDHN---RAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYE 210

Query: 205 -------LTEQQITLGNSRGFSPSAARKSTSDMSAEKS 297
                  L  + IT    RG +   ARK +S MSA K+
Sbjct: 211 AVKDDSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKA 248

>CNTP2_MOUSE (Q9CPW0) Contactin-associated protein-like 2 precursor (Cell|
            recognition molecule Caspr2)
          Length = 1332

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
 Frame = +1

Query: 154  SDVKKASPQLMLFGKPILT---EQQITLGNSRGFSPSAARKSTSDMSAEKSANNSDIPSP 324
            SD    SP+ +  GK I T   +Q+I   N+ GF+   +R   + ++  K+A      S 
Sbjct: 1143 SDTLFNSPKSLFLGKVIETGKIDQEIHKYNTPGFTGCLSRVQFNHIAPLKAALRQTNASA 1202

Query: 325  QSNQNGTMKNLSCGGVPL 378
              +  G +   +CG  PL
Sbjct: 1203 HVHIQGELVESNCGASPL 1220

>MDHC2_ARATH (P57106) Malate dehydrogenase, cytoplasmic 2 (EC 1.1.1.37)|
          Length = 332

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
 Frame = +1

Query: 106 DISCMLTIGNHQNNKKSDVKKASPQLMLFGKPI---------LTEQQITLGNSRGFSPSA 258
           D+  ++  GNH + +  DV  A+ +  +  KP+         L  + I+    RG +   
Sbjct: 178 DVKNVIIWGNHSSTQYPDVNHATVKTSVGEKPVRELVKNDEWLNGEFISTVQQRGAAIIK 237

Query: 259 ARKSTSDMSAEKSA 300
           ARK +S +SA  SA
Sbjct: 238 ARKLSSALSAASSA 251

>MDHC1_ARATH (P93819) Malate dehydrogenase, cytoplasmic 1 (EC 1.1.1.37)|
          Length = 332

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
 Frame = +1

Query: 106 DISCMLTIGNHQNNKKSDVKKASPQLMLFGKPI---------LTEQQITLGNSRGFSPSA 258
           D+  ++  GNH +++  DV  A  Q     KP+         L  + I+    RG +   
Sbjct: 178 DVKNVIIWGNHSSSQYPDVNHAKVQTSSGEKPVRELVKDDAWLDGEFISTVQQRGAAIIK 237

Query: 259 ARKSTSDMSAEKSA 300
           ARK +S +SA  SA
Sbjct: 238 ARKLSSALSAASSA 251

>K0562_HUMAN (O60308) Protein KIAA0562|
          Length = 925

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
 Frame = +3

Query: 105 RHLVHAD-HWQSPEQQEVRC---QEGFTPADALWKAH 203
           RH+ H D +   PE+   RC    E F+P +  WKAH
Sbjct: 826 RHIKHKDCNPAKPEKLANRCPLCHENFSPGEEAWKAH 862

>LEXA_BRAJA (Q89KS7) LexA repressor (EC 3.4.21.88)|
          Length = 231

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 205 LTEQQITLGNSRGFSPSAARKSTSDMSAEKSANNSDIP 318
           L E Q   GN RGF+PS    +   + A  SA+  + P
Sbjct: 69  LPELQAAAGNRRGFTPSVIEGNLGKVRASSSADEGERP 106

>SCAR2_ARATH (Q5XPJ9) Protein SCAR2 (AtSCAR2) (Protein WAVE4) (Protein|
           DISTORTED3) (Protein IRREGULAR TRICHOME BRANCH1)
          Length = 1399

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
 Frame = +1

Query: 97  AQDDISCMLTIGNHQNNKKSDVKKASPQLMLFGKPILTEQQITLGNS-RGFSPSAARKST 273
           +Q+D SC LT+     +  S+V + SP+L+           +  GN  R   P  + KS 
Sbjct: 537 SQNDQSCSLTV----QSLASEVVETSPELVRL-------DLMKGGNDGRKVDPFDSSKSC 585

Query: 274 SDMSAEKSANNSDIPSPQSNQNGTMKNLSC 363
           +   A+    NSD+PS  S+ + T +   C
Sbjct: 586 ASFDAK----NSDLPSETSSISSTSEGSRC 611

>MDHC_HUMAN (P40925) Malate dehydrogenase, cytoplasmic (EC 1.1.1.37) (Cytosolic|
           malate dehydrogenase)
          Length = 333

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 11/100 (11%)
 Frame = +1

Query: 31  LHQVDHGGQQRIAAGLIIGHQSAQDDISCMLTIGNHQNNKKSDVKKASPQLMLFGKPI-- 204
           L ++DH    R  A + +      +D+  ++  GNH + +  DV  A  +L   GK +  
Sbjct: 154 LTRLDHN---RAKAQIALKLGVTANDVKNVIIWGNHSSTQYPDVNHAKVKLQ--GKEVGV 208

Query: 205 ---------LTEQQITLGNSRGFSPSAARKSTSDMSAEKS 297
                    L  + +T    RG +   ARK +S MSA K+
Sbjct: 209 YEALKDDSWLKGEFVTTVQQRGAAVIKARKLSSAMSAAKA 248

>YAE6_SCHPO (Q09847) Hypothetical protein C23D3.06c in chromosome I|
          Length = 1325

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +1

Query: 265 KSTSDMSAEKSANNSDIPSPQSNQNGTMKNLSCGGVPLCQDN 390
           K  +  S  +++NN +IP+P    +  +KNLS    P  Q +
Sbjct: 445 KDKNKDSTVRASNNENIPTPDKQASPFVKNLSSTSSPFSQSS 486

>KP58_DROME (Q9VPC0) Serine/threonine-protein kinase PITSLRE (EC 2.7.11.22)|
           (Cell division cycle 2-like)
          Length = 952

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +3

Query: 99  ARRHLVHADHWQSPEQQEVRCQEGFTPADALWKAHTH*AADHFR*LSG 242
           A+ HL HA H+  P QQ+   Q+   PA +    H H    H + LSG
Sbjct: 109 AKHHLGHAYHYPQPPQQQ---QQPLPPAPSYAAHHYH----HHQHLSG 149

>BLM_HUMAN (P54132) Bloom syndrome protein (EC 3.6.1.-) (RecQ protein-like 3)|
           (DNA helicase, RecQ-like type 2)
          Length = 1417

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 300 RRLFGAHIRGALPSSRWRETPRV 232
           R LF  H++ +  SS W ETPR+
Sbjct: 489 RPLFNTHLQKSFVSSNWAETPRL 511


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.129    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,601,869
Number of Sequences: 219361
Number of extensions: 1415749
Number of successful extensions: 3384
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3375
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)