ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd22c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ARLY_DEIRA (Q9RWJ0) Argininosuccinate lyase (EC 4.3.2.1) (Argino... 31 3.6
2YJAH_ECOLI (P32681) Hypothetical protein yjaH 30 4.7

>ARLY_DEIRA (Q9RWJ0) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)|
           (ASAL)
          Length = 471

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = +1

Query: 382 RGWQRGDDEGDVSGKRREPQRQRHELLGGRDEVGLVGLQWRQDAVKSLWK 531
           RG+    D  D   ++  P R+ HE++G     GLVGL  R D  + LW+
Sbjct: 370 RGYSTATDVADYLARQGVPFREAHEVVG-----GLVGLASRSD--RQLWE 412



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>YJAH_ECOLI (P32681) Hypothetical protein yjaH|
          Length = 231

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 16/61 (26%), Positives = 31/61 (50%)
 Frame = +1

Query: 394 RGDDEGDVSGKRREPQRQRHELLGGRDEVGLVGLQWRQDAVKSLWKGIKLDPIESELGTW 573
           R DD GD+S  +RE   ++ +L    D++ L   ++R D ++ +   ++   +    G W
Sbjct: 107 RFDDRGDLSFMQRESDGEKQQL--SNDQIDL--YRYRADQIRQISDALRQGRVVLRQGRW 162

Query: 574 H 576
           H
Sbjct: 163 H 163


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,875,644
Number of Sequences: 219361
Number of extensions: 1207210
Number of successful extensions: 3837
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3836
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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