>GIGAN_ORYSA (Q9AWL7) GIGANTEA protein|
          Length = 1160

 Score =  180 bits (457), Expect = 7e-46
 Identities = 90/108 (83%), Positives = 97/108 (89%)
 Frame = +1

Query: 1    NASASHMKNGFSRPLLKCSEEARRNGNVASTSGKVPATLQAEASDLANFLTMDRNGGYRG 180
            +AS SH KNGF+RPLLKC+E+   NG+VASTSGK  A+LQ EASDLANFLTMDRNGGYRG
Sbjct: 825  DASRSHRKNGFARPLLKCAEDVILNGDVASTSGKAIASLQVEASDLANFLTMDRNGGYRG 884

Query: 181  SQTLLSSVISEKQELCFSVVSLLWHKLIASPETQMSAESTSAHQGWRK 324
            SQTLL SV+SEKQELCFSVVSLLW KLIASPE QMSAESTSAHQGWRK
Sbjct: 885  SQTLLRSVLSEKQELCFSVVSLLWQKLIASPEMQMSAESTSAHQGWRK 932

>GIGAN_ARATH (Q9SQI2) GIGANTEA protein|
          Length = 1173

 Score = 94.0 bits (232), Expect = 8e-20
 Identities = 49/68 (72%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
 Frame = +1

Query: 124  EASDLANFLTMDRNGG-YRGSQTLLSSVISEKQELCFSVVSLLWHKLIASPETQMSAEST 300
            +ASDLANFLT DR  G Y G+Q LL SV++EK EL FSVVSLLWHKLIA+PE Q +AEST
Sbjct: 874  DASDLANFLTADRLAGFYCGTQKLLRSVLAEKPELSFSVVSLLWHKLIAAPEIQPTAEST 933

Query: 301  SAHQGWRK 324
            SA QGWR+
Sbjct: 934  SAQQGWRQ 941

>PDZK8_HUMAN (Q8NEN9) PDZ domain-containing protein 8 (Sarcoma antigen|
           NY-SAR-84/NY-SAR-104)
          Length = 1154

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 25/77 (32%), Positives = 33/77 (42%)
 Frame = +1

Query: 85  ASTSGKVPATLQAEASDLANFLTMDRNGGYRGSQTLLSSVISEKQELCFSVVSLLWHKLI 264
           A T G++  TL  E S L  F + DR      +  L SSV  EKQ      V L+   L 
Sbjct: 317 ALTEGRLKVTL-LECSRLLIFGSYDREANVHCTLELSSSVWEEKQRSSIKTVELIKGNLQ 375

Query: 265 ASPETQMSAESTSAHQG 315
           +   T    +ST  + G
Sbjct: 376 SVGLTLRLVQSTDGYAG 392

>Y459_RICPR (Q9ZD84) Hypothetical protein RP459|
          Length = 226

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/59 (25%), Positives = 26/59 (44%)
 Frame = -1

Query: 334 HLQPFSNLDELMYFLQTSAFQEXXXXXXXXXXXXRSIIPVFLR*QNLGESESLDNPHFY 158
           H+ PF + D +   L  + F E             + I +    +N+GES +L++ H Y
Sbjct: 128 HISPFIHFDHVPMLLLHAGFSEVIVDYENIALKFENPIVLMKEIKNIGESNALNSQHNY 186

>HIS2_SHEON (Q8EFB6) Histidine biosynthesis bifunctional protein hisIE|
           [Includes: Phosphoribosyl-AMP cyclohydrolase (EC
           3.5.4.19) (PRA-CH); Phosphoribosyl-ATP pyrophosphatase
           (EC 3.6.1.31) (PRA-PH)]
          Length = 211

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/76 (21%), Positives = 34/76 (44%)
 Frame = +1

Query: 82  VASTSGKVPATLQAEASDLANFLTMDRNGGYRGSQTLLSSVISEKQELCFSVVSLLWHKL 261
           +AS  G+ P +    +        + +  G  G +T L++   +K+EL      L++H L
Sbjct: 125 IASRKGQSPESSYTASLFARGTKRIAQKVGEEGLETALAAATHDKEELVNEASDLMYHLL 184

Query: 262 IASPETQMSAESTSAH 309
           +   +  +S    +A+
Sbjct: 185 VLLEDQALSLSDITAN 200

>DIMH_MACFA (Q95KJ0) Probable dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) (18S rRNA dimethylase)
          Length = 313

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 101 FPDVLATLPFRLASSEHFKSGLEKPFFMC 15
           F   +A LP++++S   FK  L +PFF C
Sbjct: 122 FDTCVANLPYQISSPFVFKLLLHRPFFRC 150

>DIMH_HUMAN (Q9UNQ2) Probable dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) (18S rRNA dimethylase)
          Length = 313

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 101 FPDVLATLPFRLASSEHFKSGLEKPFFMC 15
           F   +A LP++++S   FK  L +PFF C
Sbjct: 122 FDTCVANLPYQISSPFVFKLLLHRPFFRC 150

>SMBT2_HUMAN (Q5VUG0) Scm-like with four MBT domains protein 2|
          Length = 894

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 7  SASHMKNGFSRPLLKCSEEARRNGNVASTSG 99
          SAS+M++  S PL KC   A  NG++ S  G
Sbjct: 6  SASNMQDPSSSPLEKCLGSANGNGDLDSEEG 36

>CNTF_CHICK (Q02011) Ciliary neurotrophic factor (CNTF) (Growth-promoting|
           activity) (GPA)
          Length = 195

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +1

Query: 79  NVASTSGKVPATLQAEASDLANFLTMDRNGGYRGSQTLLSSVISEKQEL 225
           +VA+  G   A ++  A        +D    YR  +TLL+ ++ E++EL
Sbjct: 49  SVAAVDGVPTAAVERWAEQTGTQRLLDNLAAYRAFRTLLAQMLEEQREL 97

>DIMH_MOUSE (Q9D0D4) Probable dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N',N'-adenosyl(rRNA)
           dimethyltransferase) (18S rRNA dimethylase)
          Length = 313

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 101 FPDVLATLPFRLASSEHFKSGLEKPFFMC 15
           F   +A LP++++S   FK  L +PFF C
Sbjct: 122 FDACVANLPYQISSPFVFKLLLHRPFFRC 150

>PDZK1_MOUSE (Q9JIL4) PDZ domain-containing protein 1 (CFTR-associated protein|
           of 70 kDa) (Na/Pi cotransporter C-terminal-associated
           protein) (NaPi-Cap1) (Na(+)/H(+) exchanger regulatory
           factor 3) (Sodium-hydrogen exchanger regulatory factor
           3)
          Length = 519

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +1

Query: 40  PLLKCSEEARRNGNVASTSGKVPATLQAEASD 135
           PLL C  +   NG+V      +PA L+A  S+
Sbjct: 335 PLLYCQSQELPNGSVKEGPAPIPAPLEATGSE 366


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.123    0.348 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,078,566
Number of Sequences: 219361
Number of extensions: 738176
Number of successful extensions: 1574
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1573
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)