ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd22b19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_477778.1| Oryza sativa (japonica cultivar-group), mRNA 196 5e-47
2ref|XM_477777.1| Oryza sativa (japonica cultivar-group), mRNA 188 1e-44
3ref|XM_477772.1| Oryza sativa (japonica cultivar-group), mRNA 172 7e-40
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
5dbj|AP003737.4| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
6dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
7dbj|AP003830.3| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
8gb|AY924305.1| Triticum aestivum thionin-like peptide gene, comp... 86 1e-13
9gb|AE008472.1| Streptococcus pneumoniae R6 section 88 of 184 of ... 46 0.11
10gb|AC131655.4| Mus musculus BAC clone RP23-233G16 from 8, comple... 46 0.11
11gb|AC161599.3| Mus musculus BAC clone RP23-346B16 from chromosom... 46 0.11
12gb|BC034752.1| Homo sapiens chromosome 9 open reading frame 62, ... 44 0.45
13emb|AL445305.11| Human DNA sequence from clone RP11-365D23 on ch... 44 0.45
14emb|AL353615.37| Human DNA sequence from clone RP11-555H7 on chr... 44 0.45
15gb|AC073878.7| Homo sapiens BAC clone RP11-744I24 from 7, comple... 44 0.45
16ref|XM_938976.1| PREDICTED: Homo sapiens chromosome 9 open readi... 44 0.45
17ref|XM_926593.1| PREDICTED: Homo sapiens chromosome 9 open readi... 44 0.45
18gb|AC111106.10| Mus musculus chromosome 3, clone RP23-193O12, co... 42 1.8
19gb|AC116781.9| Mus musculus chromosome 16, clone RP24-134G20, co... 42 1.8
20gb|AC048334.21| Homo sapiens 3 BAC RP11-572C15 (Roswell Park Can... 42 1.8
21dbj|AB012697.2| Mus musculus gene, complete cds 42 1.8
22gb|AC027298.20|AC027298 Mus musculus 7 BAC RP23-266F22 (Roswell ... 42 1.8
23emb|BX248129.5| Zebrafish DNA sequence from clone CH211-196M16 i... 42 1.8
24emb|BX537133.3| Zebrafish DNA sequence from clone DKEY-90M5 in l... 42 1.8
25gb|AC110572.13| Mus musculus chromosome 5, clone RP23-316P20, co... 42 1.8
26gb|AC110039.13| Mus musculus chromosome 7, clone RP23-264N6, com... 42 1.8
27emb|AL845471.7| Mouse DNA sequence from clone RP23-320N1 on chro... 42 1.8
28emb|AL590992.12| Mouse DNA sequence from clone RP23-212C14 on ch... 42 1.8
29gb|AC132886.18| Mus musculus chromosome 13, clone RP24-267I21, c... 40 7.1
30gb|AC168054.4| Mus musculus BAC clone RP24-571H12 from chromosom... 40 7.1
31gb|AC079290.12| Mus musculus chromosome 18, clone RP23-330E13, c... 40 7.1
32gb|AC160993.5| Mus musculus BAC clone RP23-159D11 from chromosom... 40 7.1
33gb|AC115013.18| Mus musculus chromosome 10, clone RP24-193P19, c... 40 7.1
34gb|AC114637.9| Mus musculus chromosome 3, clone RP24-119G15, com... 40 7.1
35gb|AC141565.3| Mus musculus BAC clone RP23-160M21 from chromosom... 40 7.1
36gb|AC147020.2| Mus musculus BAC clone RP23-267A11 from chromosom... 40 7.1
37gb|AC124662.10| Mus musculus chromosome 9, clone RP24-409K22, co... 40 7.1
38gb|AC116107.10| Mus musculus chromosome 1, clone RP23-28F18, com... 40 7.1
39gb|AC122398.2| Mus musculus BAC clone RP24-90M8 from chromosome ... 40 7.1
40ref|XM_001001092.1| PREDICTED: Mus musculus leucine-rich repeats... 40 7.1
41ref|XM_986937.1| PREDICTED: Mus musculus leucine-rich repeats an... 40 7.1
42ref|XM_001001891.1| PREDICTED: Mus musculus leucine-rich repeats... 40 7.1
43gb|AC115766.9| Mus musculus chromosome 1, clone RP23-82I24, comp... 40 7.1
44gb|AC114821.4| Mus musculus BAC clone RP23-72K1 from chromosome ... 40 7.1
45gb|AC132473.3| Mus musculus BAC clone RP23-114F11 from chromosom... 40 7.1
46emb|BX957252.12| Zebrafish DNA sequence from clone CH211-106J21,... 40 7.1
47gb|AC125398.4| Mus musculus BAC clone RP24-217G23 from chromosom... 40 7.1
48gb|AC121797.3| Mus musculus BAC clone RP23-424C23 from chromosom... 40 7.1
49gb|AC117196.3| Mus musculus BAC clone RP23-108H19 from 8, comple... 40 7.1
50gb|AC099575.10| Mus musculus chromosome 14, clone RP23-83E2, com... 40 7.1
51gb|AC117810.8| Mus musculus chromosome 18, clone RP24-571D2, com... 40 7.1
52gb|AC109245.11| Mus musculus chromosome 1, clone RP23-344F24, co... 40 7.1
53emb|AL137794.5| Human DNA sequence from clone RP5-1070A16 on chr... 40 7.1
54emb|AL121761.5|HSJ122P22 Human DNA sequence from clone RP1-122P2... 40 7.1
55gb|AC023602.5| Homo sapiens 3 BAC RP11-16N5 (Roswell Park Cancer... 40 7.1
56ref|NM_001033439.2| Mus musculus leucine-rich repeats and calpon... 40 7.1
57gb|AC157606.5| Mus musculus chromosome 7, clone RP23-466J2, comp... 40 7.1
58emb|BX247869.21| Zebrafish DNA sequence from clone CH211-67D2 in... 40 7.1
59gb|AC055733.16| Homo sapiens 3 BAC RP11-39E3 (Roswell Park Cance... 40 7.1
60gb|AC153566.12| Mus musculus 10 BAC RP23-5H4 (Roswell Park Cance... 40 7.1
61dbj|AK136026.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 40 7.1
62dbj|AK143909.1| Mus musculus adult male kidney cDNA, RIKEN full-... 40 7.1
63dbj|AK160902.1| Mus musculus 18 days pregnant adult female place... 40 7.1
64gb|AC154225.2| Mus musculus BAC clone RP24-352F3 from chromosome... 40 7.1
65gb|AC122024.6| Mus musculus BAC clone RP24-378K7 from chromosome... 40 7.1
66gb|AC164979.2| Mus musculus BAC clone RP23-244J23 from chromosom... 40 7.1
67gb|AC110527.13| Mus musculus chromosome 1, clone RP23-204H10, co... 40 7.1
68gb|AC154600.3| Mus musculus BAC clone RP23-338O2 from chromosome... 40 7.1
69gb|AC154621.2| Mus musculus BAC clone RP23-323P15 from chromosom... 40 7.1
70gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome 40 7.1
71emb|BX005079.6| Zebrafish DNA sequence from clone CH211-176D9, c... 40 7.1
72dbj|AK129264.1| Mus musculus mRNA for mKIAA1016 protein 40 7.1
73gb|AC154341.2| Mus musculus BAC clone RP23-240C2 from 16, comple... 40 7.1
74emb|Z49936.1|CEF13B10 Caenorhabditis elegans Cosmid F13B10, comp... 40 7.1
75emb|AL136504.2|HS139I22 Homo sapiens chromosome 3 sequence from ... 40 7.1
76gb|AC132147.4| Mus musculus BAC clone RP23-2F11 from 8, complete... 40 7.1
77emb|CT027602.9| Mouse DNA sequence from clone RP24-359G24 on chr... 40 7.1
78emb|Z35604.2|CEZK1058 Caenorhabditis elegans Cosmid ZK1058, comp... 40 7.1
79emb|AL845473.7| Mouse DNA sequence from clone RP23-212E8 on chro... 40 7.1
80emb|AL807737.12| Mouse DNA sequence from clone RP23-386N10 on ch... 40 7.1
81gb|AC122380.4| Mus musculus BAC clone RP23-476C23 from 10, compl... 40 7.1
82gb|AC132373.4| Mus musculus BAC clone RP23-480H8 from 1, complet... 40 7.1
83gb|AC140553.3| Mus musculus BAC clone RP24-71M17 from 1, complet... 40 7.1
84gb|AC135673.5| Mus musculus BAC clone RP24-279A17 from 16, compl... 40 7.1
85emb|AL844168.5| Mouse DNA sequence from clone RP23-413G9 on chro... 40 7.1
86gb|AF010583.1|AF010583 Oryza sativa 2-oxoglutarate/malate transl... 40 7.1
87gb|AC173341.1| Mus musculus BAC clone RP24-332P6 from chromosome... 40 7.1
88emb|AL732321.18| Mouse DNA sequence from clone RP23-167N17 on ch... 40 7.1
89emb|AL670951.6| Mouse DNA sequence from clone RP23-6N18 on chrom... 40 7.1
90emb|AJ403665.1|MMU403665 M.musculus DNA for GFAP-binding fragmen... 40 7.1

>ref|XM_477778.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 261

 Score =  196 bits (99), Expect = 5e-47
 Identities = 174/199 (87%)
 Strand = Plus / Plus

                                                                       
Query: 99  atcatgtgcctgctcatattgagcatcgctgttcactcgaccaccgcagcacagtgtggc 158
           |||||||||||| |||| |||||| || ||||  ||||  ||||||| |||||||| |||
Sbjct: 34  atcatgtgcctggtcatcttgagcctcactgtcgactccgccaccgcggcacagtgcggc 93

                                                                       
Query: 159 tgctgcgtaagcgcccgggcaaaagcatgttgctttgcttgtattgccgcaggtggctcc 218
           |||||| ||  | | ||||||||||||||||| |||| ||||||||| || |||||||||
Sbjct: 94  tgctgcatatcctctcgggcaaaagcatgttgttttggttgtattgctgctggtggctcc 153

                                                                       
Query: 219 gacacaatatgcaagaacacttgttgtttcccctgtattcttgccgattcggttgttgct 278
           ||| |||| ||||||||||||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 154 gactcaatctgcaagaacacttgttgtttcccatgtattctggccgattctgttgttgct 213

                              
Query: 279 aagatggaagaaatgggag 297
           |||||||| ||||||||||
Sbjct: 214 aagatggacgaaatgggag 232



to top

>ref|XM_477777.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 288

 Score =  188 bits (95), Expect = 1e-44
 Identities = 173/199 (86%)
 Strand = Plus / Plus

                                                                       
Query: 99  atcatgtgcctgctcatattgagcatcgctgttcactcgaccaccgcagcacagtgtggc 158
           |||||||||||| |||| |||||| || ||||  ||||  ||||||| |||||||| |||
Sbjct: 34  atcatgtgcctggtcatcttgagcctcactgtcgactccgccaccgcggcacagtgcggc 93

                                                                       
Query: 159 tgctgcgtaagcgcccgggcaaaagcatgttgctttgcttgtattgccgcaggtggctcc 218
           |||||| ||  | | ||||||||||||||||| |||| ||||||||| || |||||||||
Sbjct: 94  tgctgcatatcctctcgggcaaaagcatgttgttttggttgtattgctgctggtggctcc 153

                                                                       
Query: 219 gacacaatatgcaagaacacttgttgtttcccctgtattcttgccgattcggttgttgct 278
           ||| || | ||||||||||||||||||||||| |||||||| |||||||| |||||||||
Sbjct: 154 gactcagtctgcaagaacacttgttgtttcccatgtattctggccgattctgttgttgct 213

                              
Query: 279 aagatggaagaaatgggag 297
           |||||||| ||||||||||
Sbjct: 214 aagatggacgaaatgggag 232



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 274 ttgctaagatggaagaaatgggag 297
           ||||||||||||| ||||||||||
Sbjct: 236 ttgctaagatggacgaaatgggag 259



to top

>ref|XM_477772.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 288

 Score =  172 bits (87), Expect = 7e-40
 Identities = 141/159 (88%)
 Strand = Plus / Plus

                                                                       
Query: 139 ccaccgcagcacagtgtggctgctgcgtaagcgcccgggcaaaagcatgttgctttgctt 198
           |||||||||||||||| ||||||||| ||  | | || |||||||||||||| |||| ||
Sbjct: 74  ccaccgcagcacagtgcggctgctgcatatcctctcgagcaaaagcatgttgttttggtt 133

                                                                       
Query: 199 gtattgccgcaggtggctccgacacaatatgcaagaacacttgttgtttcccctgtattc 258
           ||||||| || |||||||||||| || | ||||||||||||||||||||||| |||||||
Sbjct: 134 gtattgctgctggtggctccgactcagtctgcaagaacacttgttgtttcccatgtattc 193

                                                  
Query: 259 ttgccgattcggttgttgctaagatggaagaaatgggag 297
           | |||||||| ||||||||||||||||| ||||||||||
Sbjct: 194 tggccgattctgttgttgctaagatggacgaaatgggag 232



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 274 ttgctaagatggaagaaatgggag 297
           ||||||||||||| ||||||||||
Sbjct: 236 ttgctaagatggacgaaatgggag 259



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  155 bits (78), Expect = 2e-34
 Identities = 147/170 (86%)
 Strand = Plus / Plus

                                                                            
Query: 99       atcatgtgcctgctcatattgagcatcgctgttcactcgaccaccgcagcacagtgtggc 158
                |||||||||||| |||| |||||| || ||||  ||||  ||||||| |||||||| |||
Sbjct: 14249821 atcatgtgcctggtcatcttgagcctcactgtcgactccgccaccgcggcacagtgcggc 14249880

                                                                            
Query: 159      tgctgcgtaagcgcccgggcaaaagcatgttgctttgcttgtattgccgcaggtggctcc 218
                |||||| ||  | | ||||||||||||||||| |||| ||||||||| || |||||||||
Sbjct: 14249881 tgctgcatatcctctcgggcaaaagcatgttgttttggttgtattgctgctggtggctcc 14249940

                                                                  
Query: 219      gacacaatatgcaagaacacttgttgtttcccctgtattcttgccgattc 268
                ||| |||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 14249941 gactcaatctgcaagaacacttgttgtttcccatgtattctggccgattc 14249990



 Score =  147 bits (74), Expect = 4e-32
 Identities = 146/170 (85%)
 Strand = Plus / Plus

                                                                            
Query: 99       atcatgtgcctgctcatattgagcatcgctgttcactcgaccaccgcagcacagtgtggc 158
                |||||||||||| |||| |||||| || ||||  ||||  ||||||| |||||||| |||
Sbjct: 14238678 atcatgtgcctggtcatcttgagcctcactgtcgactccgccaccgcggcacagtgcggc 14238737

                                                                            
Query: 159      tgctgcgtaagcgcccgggcaaaagcatgttgctttgcttgtattgccgcaggtggctcc 218
                |||||| ||  | | ||||||||||||||||| |||| ||||||||| || |||||||||
Sbjct: 14238738 tgctgcatatcctctcgggcaaaagcatgttgttttggttgtattgctgctggtggctcc 14238797

                                                                  
Query: 219      gacacaatatgcaagaacacttgttgtttcccctgtattcttgccgattc 268
                ||| || | ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 14238798 gactcagtctgcaagaacacttgttgtttcccatgtattctggccgattc 14238847



 Score =  131 bits (66), Expect = 3e-27
 Identities = 114/130 (87%)
 Strand = Plus / Plus

                                                                            
Query: 139      ccaccgcagcacagtgtggctgctgcgtaagcgcccgggcaaaagcatgttgctttgctt 198
                |||||||||||||||| ||||||||| ||  | | || |||||||||||||| |||| ||
Sbjct: 14064588 ccaccgcagcacagtgcggctgctgcatatcctctcgagcaaaagcatgttgttttggtt 14064647

                                                                            
Query: 199      gtattgccgcaggtggctccgacacaatatgcaagaacacttgttgtttcccctgtattc 258
                ||||||| || |||||||||||| || | ||||||||||||||||||||||| |||||||
Sbjct: 14064648 gtattgctgctggtggctccgactcagtctgcaagaacacttgttgtttcccatgtattc 14064707

                          
Query: 259      ttgccgattc 268
                | ||||||||
Sbjct: 14064708 tggccgattc 14064717



 Score =  127 bits (64), Expect = 4e-26
 Identities = 157/188 (83%)
 Strand = Plus / Plus

                                                                            
Query: 81       actaccaccttgaaggcaatcatgtgcctgctcatattgagcatcgctgttcactcgacc 140
                |||||||| | || || |||||| |||||| |||| |||||| || ||||  ||||  ||
Sbjct: 14053091 actaccacttcgatggtaatcatttgcctggtcatcttgagcctcactgtcgactccgcc 14053150

                                                                            
Query: 141      accgcagcacagtgtggctgctgcgtaagcgcccgggcaaaagcatgttgctttgcttgt 200
                |||||||||||||| ||||||||| ||  | | |||||||||||||||||  ||| ||||
Sbjct: 14053151 accgcagcacagtgcggctgctgcatatcctctcgggcaaaagcatgttgtgttggttgt 14053210

                                                                            
Query: 201      attgccgcaggtggctccgacacaatatgcaagaacacttgttgtttcccctgtattctt 260
                ||||| || ||||||||| || || | ||||||||||||||| ||||||| |||||||| 
Sbjct: 14053211 attgctgctggtggctccaactcagtctgcaagaacacttgtcgtttcccatgtattctg 14053270

                        
Query: 261      gccgattc 268
                ||||||||
Sbjct: 14053271 gccgattc 14053278



 Score =  117 bits (59), Expect = 4e-23
 Identities = 86/95 (90%)
 Strand = Plus / Plus

                                                                            
Query: 174      cgggcaaaagcatgttgctttgcttgtattgccgcaggtggctccgacacaatatgcaag 233
                ||||||||||||||||| |||| ||||||||| || |||||||||||| || | ||||||
Sbjct: 14147559 cgggcaaaagcatgttgttttggttgtattgctgctggtggctccgactcagtctgcaag 14147618

                                                   
Query: 234      aacacttgttgtttcccctgtattcttgccgattc 268
                ||||||||||||||||| |||||||| ||||||||
Sbjct: 14147619 aacacttgttgtttcccatgtattctggccgattc 14147653



 Score =  107 bits (54), Expect = 4e-20
 Identities = 141/170 (82%)
 Strand = Plus / Plus

                                                                            
Query: 99       atcatgtgcctgctcatattgagcatcgctgttcactcgaccaccgcagcacagtgtggc 158
                |||||||||||| |||| |||||| || ||||  ||||  ||||||| |||||||| |||
Sbjct: 14124962 atcatgtgcctggtcatcttgagcctcactgtcgactccgccaccgcggcacagtgcggc 14125021

                                                                            
Query: 159      tgctgcgtaagcgcccgggcaaaagcatgttgctttgcttgtattgccgcaggtggctcc 218
                |||||| ||  | |   ||||||||||||||| || | ||||| ||| || |||||||||
Sbjct: 14125022 tgctgcatatcctcttaggcaaaagcatgttgtttcggttgtactgctgctggtggctcc 14125081

                                                                  
Query: 219      gacacaatatgcaagaacacttgttgtttcccctgtattcttgccgattc 268
                ||| || | | ||||||||||||||||||||| |||||||| ||||||||
Sbjct: 14125082 gactcagtctacaagaacacttgttgtttcccatgtattctggccgattc 14125131



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                      
Query: 382      ttgcttcaagctatggtcaagttatgttaatgtgtacctacaataagttgttga 435
                |||||||||| ||||| |||||||||||||||| || || |||||| |||||||
Sbjct: 14250351 ttgcttcaagttatggccaagttatgttaatgtttatctccaataaattgttga 14250404



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                      
Query: 382      ttgcttcaagctatggtcaagttatgttaatgtgtacctacaataagttgttga 435
                |||||||||| ||||| |||||||||||||||| || || |||||| |||||||
Sbjct: 14148014 ttgcttcaagttatggccaagttatgttaatgtttatctccaataaattgttga 14148067



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 48/54 (88%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                      
Query: 382      ttgcttcaagctatggtcaagttatgttaatgtgtacctacaataagttgttga 435
                |||||||||| ||||| |||||||||||||||| || || |||||| |||||||
Sbjct: 14125515 ttgcttcaagttatggccaagttatgttaatgt-tatcttcaataaattgttga 14125567



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                      
Query: 382      ttgcttcaagctatggtcaagttatgttaatgtgtacctacaataagttgttga 435
                |||||||||| ||||| | |||||||||||||| || || |||||| |||||||
Sbjct: 14065100 ttgcttcaagttatggcctagttatgttaatgtttatctccaataaattgttga 14065153



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 382      ttgcttcaagctatggtcaagttatgttaatgt 414
                |||||||||| ||||| ||||||||||||||||
Sbjct: 14239219 ttgcttcaagttatggccaagttatgttaatgt 14239251



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 270      gttgttgctaagatggaagaaatgggag 297
                ||||||||||||||||| ||||||||||
Sbjct: 14250239 gttgttgctaagatggacgaaatgggag 14250266



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 270      gttgttgctaagatggaagaaatgggag 297
                ||||||||||||||||| ||||||||||
Sbjct: 14239080 gttgttgctaagatggacgaaatgggag 14239107



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 270      gttgttgctaagatggaagaaatgggag 297
                ||||||||||||||||| ||||||||||
Sbjct: 14147902 gttgttgctaagatggacgaaatgggag 14147929



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 270      gttgttgctaagatggaagaaatgggag 297
                ||||||||||||||||| ||||||||||
Sbjct: 14125376 gttgttgctaagatggacgaaatgggag 14125403



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 270      gttgttgctaagatggaagaaatgggag 297
                ||||||||||||||||| ||||||||||
Sbjct: 14064961 gttgttgctaagatggacgaaatgggag 14064988



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 270      gttgttgctaagatggaagaaatgggag 297
                ||||||||||||||||| ||||||||||
Sbjct: 14053523 gttgttgctaagatggacgaaatgggag 14053550



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 382      ttgcttcaagctatggtcaagttatgttaat 412
                |||||||||| ||||| ||||||||||||||
Sbjct: 14054672 ttgcttcaagttatggccaagttatgttaat 14054702



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                            
Query: 99       atcatgtgcctgctcatattgagcatcgctgttcactcgaccaccgcagcacagtgtggc 158
                |||||||| ||| |||| |||||| || ||||  ||||  |||||||  |||||||||||
Sbjct: 14136262 atcatgtggctggtcatcttgagcctcactgtcgactccgccaccgcgacacagtgtggc 14136321

                      
Query: 159      tgctgc 164
                ||||||
Sbjct: 14136322 tgctgc 14136327



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 274      ttgctaagatggaagaaatgggag 297
                ||||||||||||| ||||||||||
Sbjct: 14239111 ttgctaagatggacgaaatgggag 14239134



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 274      ttgctaagatggaagaaatgggag 297
                ||||||||||||| ||||||||||
Sbjct: 14125407 ttgctaagatggacgaaatgggag 14125430



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 274      ttgctaagatggaagaaatgggag 297
                ||||||||||||| ||||||||||
Sbjct: 14064992 ttgctaagatggacgaaatgggag 14065015



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 274      ttgctaagatggaagaaatgggag 297
                ||||||||||||| ||||||||||
Sbjct: 14053554 ttgctaagatggatgaaatgggag 14053577



to top

>dbj|AP003737.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
           BAC clone:OJ1051_D12
          Length = 144262

 Score =  155 bits (78), Expect = 2e-34
 Identities = 147/170 (86%)
 Strand = Plus / Plus

                                                                       
Query: 99  atcatgtgcctgctcatattgagcatcgctgttcactcgaccaccgcagcacagtgtggc 158
           |||||||||||| |||| |||||| || ||||  ||||  ||||||| |||||||| |||
Sbjct: 132 atcatgtgcctggtcatcttgagcctcactgtcgactccgccaccgcggcacagtgcggc 191

                                                                       
Query: 159 tgctgcgtaagcgcccgggcaaaagcatgttgctttgcttgtattgccgcaggtggctcc 218
           |||||| ||  | | ||||||||||||||||| |||| ||||||||| || |||||||||
Sbjct: 192 tgctgcatatcctctcgggcaaaagcatgttgttttggttgtattgctgctggtggctcc 251

                                                             
Query: 219 gacacaatatgcaagaacacttgttgtttcccctgtattcttgccgattc 268
           ||| |||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 252 gactcaatctgcaagaacacttgttgtttcccatgtattctggccgattc 301



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 382 ttgcttcaagctatggtcaagttatgttaatgtgtacctacaataagttgttga 435
           |||||||||| ||||| |||||||||||||||| || || |||||| |||||||
Sbjct: 662 ttgcttcaagttatggccaagttatgttaatgtttatctccaataaattgttga 715



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 270 gttgttgctaagatggaagaaatgggag 297
           ||||||||||||||||| ||||||||||
Sbjct: 550 gttgttgctaagatggacgaaatgggag 577



to top

>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0067K15
          Length = 160162

 Score =  155 bits (78), Expect = 2e-34
 Identities = 147/170 (86%)
 Strand = Plus / Plus

                                                                          
Query: 99     atcatgtgcctgctcatattgagcatcgctgttcactcgaccaccgcagcacagtgtggc 158
              |||||||||||| |||| |||||| || ||||  ||||  ||||||| |||||||| |||
Sbjct: 134702 atcatgtgcctggtcatcttgagcctcactgtcgactccgccaccgcggcacagtgcggc 134761

                                                                          
Query: 159    tgctgcgtaagcgcccgggcaaaagcatgttgctttgcttgtattgccgcaggtggctcc 218
              |||||| ||  | | ||||||||||||||||| |||| ||||||||| || |||||||||
Sbjct: 134762 tgctgcatatcctctcgggcaaaagcatgttgttttggttgtattgctgctggtggctcc 134821

                                                                
Query: 219    gacacaatatgcaagaacacttgttgtttcccctgtattcttgccgattc 268
              ||| |||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 134822 gactcaatctgcaagaacacttgttgtttcccatgtattctggccgattc 134871



 Score =  147 bits (74), Expect = 4e-32
 Identities = 146/170 (85%)
 Strand = Plus / Plus

                                                                          
Query: 99     atcatgtgcctgctcatattgagcatcgctgttcactcgaccaccgcagcacagtgtggc 158
              |||||||||||| |||| |||||| || ||||  ||||  ||||||| |||||||| |||
Sbjct: 123559 atcatgtgcctggtcatcttgagcctcactgtcgactccgccaccgcggcacagtgcggc 123618

                                                                          
Query: 159    tgctgcgtaagcgcccgggcaaaagcatgttgctttgcttgtattgccgcaggtggctcc 218
              |||||| ||  | | ||||||||||||||||| |||| ||||||||| || |||||||||
Sbjct: 123619 tgctgcatatcctctcgggcaaaagcatgttgttttggttgtattgctgctggtggctcc 123678

                                                                
Query: 219    gacacaatatgcaagaacacttgttgtttcccctgtattcttgccgattc 268
              ||| || | ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 123679 gactcagtctgcaagaacacttgttgtttcccatgtattctggccgattc 123728



 Score =  117 bits (59), Expect = 4e-23
 Identities = 86/95 (90%)
 Strand = Plus / Plus

                                                                         
Query: 174   cgggcaaaagcatgttgctttgcttgtattgccgcaggtggctccgacacaatatgcaag 233
             ||||||||||||||||| |||| ||||||||| || |||||||||||| || | ||||||
Sbjct: 32440 cgggcaaaagcatgttgttttggttgtattgctgctggtggctccgactcagtctgcaag 32499

                                                
Query: 234   aacacttgttgtttcccctgtattcttgccgattc 268
             ||||||||||||||||| |||||||| ||||||||
Sbjct: 32500 aacacttgttgtttcccatgtattctggccgattc 32534



 Score =  107 bits (54), Expect = 4e-20
 Identities = 141/170 (82%)
 Strand = Plus / Plus

                                                                         
Query: 99    atcatgtgcctgctcatattgagcatcgctgttcactcgaccaccgcagcacagtgtggc 158
             |||||||||||| |||| |||||| || ||||  ||||  ||||||| |||||||| |||
Sbjct: 9843  atcatgtgcctggtcatcttgagcctcactgtcgactccgccaccgcggcacagtgcggc 9902

                                                                         
Query: 159   tgctgcgtaagcgcccgggcaaaagcatgttgctttgcttgtattgccgcaggtggctcc 218
             |||||| ||  | |   ||||||||||||||| || | ||||| ||| || |||||||||
Sbjct: 9903  tgctgcatatcctcttaggcaaaagcatgttgtttcggttgtactgctgctggtggctcc 9962

                                                               
Query: 219   gacacaatatgcaagaacacttgttgtttcccctgtattcttgccgattc 268
             ||| || | | ||||||||||||||||||||| |||||||| ||||||||
Sbjct: 9963  gactcagtctacaagaacacttgttgtttcccatgtattctggccgattc 10012



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                    
Query: 382    ttgcttcaagctatggtcaagttatgttaatgtgtacctacaataagttgttga 435
              |||||||||| ||||| |||||||||||||||| || || |||||| |||||||
Sbjct: 135232 ttgcttcaagttatggccaagttatgttaatgtttatctccaataaattgttga 135285



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                   
Query: 382   ttgcttcaagctatggtcaagttatgttaatgtgtacctacaataagttgttga 435
             |||||||||| ||||| |||||||||||||||| || || |||||| |||||||
Sbjct: 32895 ttgcttcaagttatggccaagttatgttaatgtttatctccaataaattgttga 32948



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 48/54 (88%), Gaps = 1/54 (1%)
 Strand = Plus / Plus

                                                                   
Query: 382   ttgcttcaagctatggtcaagttatgttaatgtgtacctacaataagttgttga 435
             |||||||||| ||||| |||||||||||||||| || || |||||| |||||||
Sbjct: 10396 ttgcttcaagttatggccaagttatgttaatgt-tatcttcaataaattgttga 10448



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 382    ttgcttcaagctatggtcaagttatgttaatgt 414
              |||||||||| ||||| ||||||||||||||||
Sbjct: 124100 ttgcttcaagttatggccaagttatgttaatgt 124132



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 270    gttgttgctaagatggaagaaatgggag 297
              ||||||||||||||||| ||||||||||
Sbjct: 135120 gttgttgctaagatggacgaaatgggag 135147



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 270    gttgttgctaagatggaagaaatgggag 297
              ||||||||||||||||| ||||||||||
Sbjct: 123961 gttgttgctaagatggacgaaatgggag 123988



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 270   gttgttgctaagatggaagaaatgggag 297
             ||||||||||||||||| ||||||||||
Sbjct: 32783 gttgttgctaagatggacgaaatgggag 32810



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 270   gttgttgctaagatggaagaaatgggag 297
             ||||||||||||||||| ||||||||||
Sbjct: 10257 gttgttgctaagatggacgaaatgggag 10284



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                         
Query: 99    atcatgtgcctgctcatattgagcatcgctgttcactcgaccaccgcagcacagtgtggc 158
             |||||||| ||| |||| |||||| || ||||  ||||  |||||||  |||||||||||
Sbjct: 21143 atcatgtggctggtcatcttgagcctcactgtcgactccgccaccgcgacacagtgtggc 21202

                   
Query: 159   tgctgc 164
             ||||||
Sbjct: 21203 tgctgc 21208



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 274    ttgctaagatggaagaaatgggag 297
              ||||||||||||| ||||||||||
Sbjct: 123992 ttgctaagatggacgaaatgggag 124015



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 274   ttgctaagatggaagaaatgggag 297
             ||||||||||||| ||||||||||
Sbjct: 10288 ttgctaagatggacgaaatgggag 10311



to top

>dbj|AP003830.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1423_A11
          Length = 98377

 Score =  131 bits (66), Expect = 3e-27
 Identities = 114/130 (87%)
 Strand = Plus / Plus

                                                                         
Query: 139   ccaccgcagcacagtgtggctgctgcgtaagcgcccgggcaaaagcatgttgctttgctt 198
             |||||||||||||||| ||||||||| ||  | | || |||||||||||||| |||| ||
Sbjct: 40547 ccaccgcagcacagtgcggctgctgcatatcctctcgagcaaaagcatgttgttttggtt 40606

                                                                         
Query: 199   gtattgccgcaggtggctccgacacaatatgcaagaacacttgttgtttcccctgtattc 258
             ||||||| || |||||||||||| || | ||||||||||||||||||||||| |||||||
Sbjct: 40607 gtattgctgctggtggctccgactcagtctgcaagaacacttgttgtttcccatgtattc 40666

                       
Query: 259   ttgccgattc 268
             | ||||||||
Sbjct: 40667 tggccgattc 40676



 Score =  127 bits (64), Expect = 4e-26
 Identities = 157/188 (83%)
 Strand = Plus / Plus

                                                                         
Query: 81    actaccaccttgaaggcaatcatgtgcctgctcatattgagcatcgctgttcactcgacc 140
             |||||||| | || || |||||| |||||| |||| |||||| || ||||  ||||  ||
Sbjct: 29050 actaccacttcgatggtaatcatttgcctggtcatcttgagcctcactgtcgactccgcc 29109

                                                                         
Query: 141   accgcagcacagtgtggctgctgcgtaagcgcccgggcaaaagcatgttgctttgcttgt 200
             |||||||||||||| ||||||||| ||  | | |||||||||||||||||  ||| ||||
Sbjct: 29110 accgcagcacagtgcggctgctgcatatcctctcgggcaaaagcatgttgtgttggttgt 29169

                                                                         
Query: 201   attgccgcaggtggctccgacacaatatgcaagaacacttgttgtttcccctgtattctt 260
             ||||| || ||||||||| || || | ||||||||||||||| ||||||| |||||||| 
Sbjct: 29170 attgctgctggtggctccaactcagtctgcaagaacacttgtcgtttcccatgtattctg 29229

                     
Query: 261   gccgattc 268
             ||||||||
Sbjct: 29230 gccgattc 29237



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                   
Query: 382   ttgcttcaagctatggtcaagttatgttaatgtgtacctacaataagttgttga 435
             |||||||||| ||||| | |||||||||||||| || || |||||| |||||||
Sbjct: 41059 ttgcttcaagttatggcctagttatgttaatgtttatctccaataaattgttga 41112



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 270   gttgttgctaagatggaagaaatgggag 297
             ||||||||||||||||| ||||||||||
Sbjct: 40920 gttgttgctaagatggacgaaatgggag 40947



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 270   gttgttgctaagatggaagaaatgggag 297
             ||||||||||||||||| ||||||||||
Sbjct: 29482 gttgttgctaagatggacgaaatgggag 29509



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 382   ttgcttcaagctatggtcaagttatgttaat 412
             |||||||||| ||||| ||||||||||||||
Sbjct: 30631 ttgcttcaagttatggccaagttatgttaat 30661



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 274   ttgctaagatggaagaaatgggag 297
             ||||||||||||| ||||||||||
Sbjct: 40951 ttgctaagatggacgaaatgggag 40974



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 274   ttgctaagatggaagaaatgggag 297
             ||||||||||||| ||||||||||
Sbjct: 29513 ttgctaagatggatgaaatgggag 29536



to top

>gb|AY924305.1| Triticum aestivum thionin-like peptide gene, complete cds
          Length = 884

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                       
Query: 53  aatggagggcaagaggatgctcactggcactaccaccttgaaggcaatcatgtgcctgct 112
           ||||||||| ||||||||||||| | ||||||||||  ||||||  ||||||||||||||
Sbjct: 74  aatggagggtaagaggatgctcattagcactaccactctgaaggtgatcatgtgcctgct 133

                                              
Query: 113 catattgagcatcgctgttcactcgaccaccgcag 147
           |||  ||||| |||| ||  |||||||||||||||
Sbjct: 134 catcctgagcctcgccgtcaactcgaccaccgcag 168



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                       
Query: 353 atggatgccattcacatgcatatgatgcattgcttcaagctatggtcaagttatgttaat 412
           ||||||||||||||   |||| || || |||||||||| |||||| ||||||||| ||||
Sbjct: 614 atggatgccattcatcggcatgtgttggattgcttcaatctatggccaagttatgctaat 673

                                  
Query: 413 gtgtacctacaataagttgttga 435
           || ||||| |||||| |||||||
Sbjct: 674 gtttacctccaataaattgttga 696



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 228 tgcaagaacacttgttgtttcccctgtattcttg 261
           ||||||||||||||||||||||| ||| ||||||
Sbjct: 246 tgcaagaacacttgttgtttcccgtgtcttcttg 279



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 273 gttgctaagatggaagaaatgggag 297
           |||||||||||||| ||||||||||
Sbjct: 534 gttgctaagatggatgaaatgggag 558



to top

>gb|AE008472.1| Streptococcus pneumoniae R6 section 88 of 184 of the complete genome
          Length = 10168

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 271  ttgttgctaagatggaagaaatgggag 297
            ||||||||||| |||||||||||||||
Sbjct: 1182 ttgttgctaagttggaagaaatgggag 1208



to top

>gb|AC131655.4| Mus musculus BAC clone RP23-233G16 from 8, complete sequence
          Length = 190990

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 489    ttatgcatttgtgcatgtgtgtg 511
              |||||||||||||||||||||||
Sbjct: 111765 ttatgcatttgtgcatgtgtgtg 111787



to top

>gb|AC161599.3| Mus musculus BAC clone RP23-346B16 from chromosome 9, complete sequence
          Length = 198471

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 491    atgcatttgtgcatgtgtgtgag 513
              |||||||||||||||||||||||
Sbjct: 149179 atgcatttgtgcatgtgtgtgag 149157



to top

>gb|BC034752.1| Homo sapiens chromosome 9 open reading frame 62, mRNA (cDNA clone
           MGC:35463 IMAGE:5193354), complete cds
          Length = 1963

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 486 atgttatgcatttgtgcatgtgtgtg 511
           |||| |||||||||||||||||||||
Sbjct: 954 atgtgatgcatttgtgcatgtgtgtg 979



to top

>emb|AL445305.11| Human DNA sequence from clone RP11-365D23 on chromosome 1 Contains an
              adaptor-related protein complex 3 pseudogene, a keratin 18
              (KRT18) pseudogene, a novel pseudogene, a
              ubiquitin-conjugating enzyme E2 variant 1 (UBE2V1)
              pseudogene, the 5' end of the CENPF gene for centromere
              protein F 350/400ka (mitosin), the 5' end of the PTPN14
              gene for protein tyrosine phosphatase, non-receptor type 14
              protein and a CpG island, complete sequence
          Length = 193256

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 479    tacatatatgttatgcatttgt 500
              ||||||||||||||||||||||
Sbjct: 123173 tacatatatgttatgcatttgt 123152



to top

>emb|AL353615.37| Human DNA sequence from clone RP11-555H7 on chromosome 9 Contains a
             gene for a novel protein (MGC35463), complete sequence
          Length = 107891

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 486   atgttatgcatttgtgcatgtgtgtg 511
             |||| |||||||||||||||||||||
Sbjct: 45818 atgtgatgcatttgtgcatgtgtgtg 45843



to top

>gb|AC073878.7| Homo sapiens BAC clone RP11-744I24 from 7, complete sequence
          Length = 111375

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 491   atgcatttgtgcatgtgtgtga 512
             ||||||||||||||||||||||
Sbjct: 11282 atgcatttgtgcatgtgtgtga 11261



to top

>ref|XM_938976.1| PREDICTED: Homo sapiens chromosome 9 open reading frame 62 (C9orf62),
            mRNA
          Length = 2218

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 486  atgttatgcatttgtgcatgtgtgtg 511
            |||| |||||||||||||||||||||
Sbjct: 1254 atgtgatgcatttgtgcatgtgtgtg 1279



to top

>ref|XM_926593.1| PREDICTED: Homo sapiens chromosome 9 open reading frame 62 (C9orf62),
            mRNA
          Length = 2218

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 486  atgttatgcatttgtgcatgtgtgtg 511
            |||| |||||||||||||||||||||
Sbjct: 1254 atgtgatgcatttgtgcatgtgtgtg 1279



to top

>gb|AC111106.10| Mus musculus chromosome 3, clone RP23-193O12, complete sequence
          Length = 202749

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 491   atgcatttgtgcatgtgtgtgagct 515
             |||||||| ||||||||||||||||
Sbjct: 69976 atgcatttatgcatgtgtgtgagct 70000



to top

>gb|AC116781.9| Mus musculus chromosome 16, clone RP24-134G20, complete sequence
          Length = 166568

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 491   atgcatttgtgcatgtgtgtg 511
             |||||||||||||||||||||
Sbjct: 29717 atgcatttgtgcatgtgtgtg 29737



to top

>gb|AC048334.21| Homo sapiens 3 BAC RP11-572C15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 215719

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 490   tatgcatttgtgcatgtgtgt 510
             |||||||||||||||||||||
Sbjct: 56277 tatgcatttgtgcatgtgtgt 56297



to top

>dbj|AB012697.2| Mus musculus gene, complete cds
          Length = 42342

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 487   tgttatgcatttgtgcatgtgtgtg 511
             |||||| ||||||||||||||||||
Sbjct: 17069 tgttatacatttgtgcatgtgtgtg 17045



to top

>gb|AC027298.20|AC027298 Mus musculus 7 BAC RP23-266F22 (Roswell Park Cancer Institute Mouse BAC
              Library) complete sequence
          Length = 201467

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 491    atgcatttgtgcatgtgtgtg 511
              |||||||||||||||||||||
Sbjct: 102590 atgcatttgtgcatgtgtgtg 102610



to top

>emb|BX248129.5| Zebrafish DNA sequence from clone CH211-196M16 in linkage group 17,
              complete sequence
          Length = 217707

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 491    atgcatttgtgcatgtgtgtg 511
              |||||||||||||||||||||
Sbjct: 109421 atgcatttgtgcatgtgtgtg 109441



to top

>emb|BX537133.3| Zebrafish DNA sequence from clone DKEY-90M5 in linkage group 20, complete
              sequence
          Length = 249791

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 476    aattacatatatgttatgcatttgt 500
              |||||||| ||||||||||||||||
Sbjct: 227941 aattacatttatgttatgcatttgt 227917



to top

>gb|AC110572.13| Mus musculus chromosome 5, clone RP23-316P20, complete sequence
          Length = 170850

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 491   atgcatttgtgcatgtgtgtg 511
             |||||||||||||||||||||
Sbjct: 64127 atgcatttgtgcatgtgtgtg 64107



to top

>gb|AC110039.13| Mus musculus chromosome 7, clone RP23-264N6, complete sequence
          Length = 173706

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 491    atgcatttgtgcatgtgtgtg 511
              |||||||||||||||||||||
Sbjct: 126901 atgcatttgtgcatgtgtgtg 126921



to top

>emb|AL845471.7| Mouse DNA sequence from clone RP23-320N1 on chromosome 2, complete
             sequence
          Length = 127825

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 487   tgttatgcatttgtgcatgtgtgtg 511
             |||||| ||||||||||||||||||
Sbjct: 30834 tgttatacatttgtgcatgtgtgtg 30858



to top

>emb|AL590992.12| Mouse DNA sequence from clone RP23-212C14 on chromosome 11, complete
             sequence
          Length = 118444

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 489   ttatgcatttgtgcatgtgtgtgag 513
             |||||||| ||||||||||||||||
Sbjct: 10158 ttatgcatgtgtgcatgtgtgtgag 10134



to top

>gb|AC132886.18| Mus musculus chromosome 13, clone RP24-267I21, complete sequence
          Length = 184315

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 49864 tgcatttgtgcatgtgtgtg 49883



to top

>gb|AC168054.4| Mus musculus BAC clone RP24-571H12 from chromosome 9, complete sequence
          Length = 136974

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 492   tgcatttgtgcatgtgtgtgagctcaca 519
             ||||| |||||||||||||| |||||||
Sbjct: 21959 tgcatgtgtgcatgtgtgtgtgctcaca 21986



to top

>gb|AC079290.12| Mus musculus chromosome 18, clone RP23-330E13, complete sequence
          Length = 202255

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 76730 tgcatttgtgcatgtgtgtg 76711



to top

>gb|AC160993.5| Mus musculus BAC clone RP23-159D11 from chromosome 16, complete
             sequence
          Length = 187536

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 13300 tgcatttgtgcatgtgtgtg 13319



to top

>gb|AC115013.18| Mus musculus chromosome 10, clone RP24-193P19, complete sequence
          Length = 183402

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 277    ctaagatggaagaaatggga 296
              ||||||||||||||||||||
Sbjct: 157808 ctaagatggaagaaatggga 157827



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 277    ctaagatggaagaaatggga 296
              ||||||||||||||||||||
Sbjct: 128632 ctaagatggaagaaatggga 128651



to top

>gb|AC114637.9| Mus musculus chromosome 3, clone RP24-119G15, complete sequence
          Length = 179087

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 496   tttgtgcatgtgtgtgagctcaca 519
             ||||||| ||||||||||||||||
Sbjct: 10577 tttgtgcgtgtgtgtgagctcaca 10554



to top

>gb|AC141565.3| Mus musculus BAC clone RP23-160M21 from chromosome 14, complete
             sequence
          Length = 210128

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 496   tttgtgcatgtgtgtgagct 515
             ||||||||||||||||||||
Sbjct: 44073 tttgtgcatgtgtgtgagct 44054



to top

>gb|AC147020.2| Mus musculus BAC clone RP23-267A11 from chromosome 18, complete
             sequence
          Length = 204727

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 234   aacacttgttgtttcccctgtatt 257
             ||||||||||||||| ||||||||
Sbjct: 30921 aacacttgttgtttctcctgtatt 30898



to top

>gb|AC124662.10| Mus musculus chromosome 9, clone RP24-409K22, complete sequence
          Length = 235471

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 490   tatgcatttgtgcatgtgtg 509
             ||||||||||||||||||||
Sbjct: 80599 tatgcatttgtgcatgtgtg 80618



to top

>gb|AC116107.10| Mus musculus chromosome 1, clone RP23-28F18, complete sequence
          Length = 262581

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 492    tgcatttgtgcatgtgtgtg 511
              ||||||||||||||||||||
Sbjct: 182272 tgcatttgtgcatgtgtgtg 182253



to top

>gb|AC122398.2| Mus musculus BAC clone RP24-90M8 from chromosome 18, complete sequence
          Length = 215758

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 29665 tgcatttgtgcatgtgtgtg 29646



to top

>ref|XM_001001092.1| PREDICTED: Mus musculus leucine-rich repeats and calponin homology
            (CH) domain containing 1 (Lrch1), mRNA
          Length = 5094

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   aagaggatgctcactggcac 82
            ||||||||||||||||||||
Sbjct: 1592 aagaggatgctcactggcac 1611



to top

>ref|XM_986937.1| PREDICTED: Mus musculus leucine-rich repeats and calponin homology
            (CH) domain containing 1 (Lrch1), mRNA
          Length = 5088

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   aagaggatgctcactggcac 82
            ||||||||||||||||||||
Sbjct: 1592 aagaggatgctcactggcac 1611



to top

>ref|XM_001001891.1| PREDICTED: Mus musculus leucine-rich repeats and calponin homology
            (CH) domain containing 1 (Lrch1), mRNA
          Length = 5094

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   aagaggatgctcactggcac 82
            ||||||||||||||||||||
Sbjct: 1592 aagaggatgctcactggcac 1611



to top

>gb|AC115766.9| Mus musculus chromosome 1, clone RP23-82I24, complete sequence
          Length = 225600

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 492    tgcatttgtgcatgtgtgtg 511
              ||||||||||||||||||||
Sbjct: 166972 tgcatttgtgcatgtgtgtg 166953



to top

>gb|AC114821.4| Mus musculus BAC clone RP23-72K1 from chromosome 1, complete sequence
          Length = 197978

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 17919 tgcatttgtgcatgtgtgtg 17900



to top

>gb|AC132473.3| Mus musculus BAC clone RP23-114F11 from chromosome 8, complete sequence
          Length = 162027

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 492    tgcatttgtgcatgtgtgtg 511
              ||||||||||||||||||||
Sbjct: 148711 tgcatttgtgcatgtgtgtg 148730



to top

>emb|BX957252.12| Zebrafish DNA sequence from clone CH211-106J21, complete sequence
          Length = 177496

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 38     acaacaaaaggaaacaatgg 57
              ||||||||||||||||||||
Sbjct: 132797 acaacaaaaggaaacaatgg 132816



to top

>gb|AC125398.4| Mus musculus BAC clone RP24-217G23 from chromosome 18, complete
             sequence
          Length = 166948

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 234   aacacttgttgtttcccctgtatt 257
             ||||||||||||||| ||||||||
Sbjct: 32159 aacacttgttgtttctcctgtatt 32182



to top

>gb|AC121797.3| Mus musculus BAC clone RP23-424C23 from chromosome 3, complete sequence
          Length = 177109

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 496   tttgtgcatgtgtgtgagctcaca 519
             ||||||| ||||||||||||||||
Sbjct: 34644 tttgtgcgtgtgtgtgagctcaca 34667



to top

>gb|AC117196.3| Mus musculus BAC clone RP23-108H19 from 8, complete sequence
          Length = 185947

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 492    tgcatttgtgcatgtgtgtg 511
              ||||||||||||||||||||
Sbjct: 180701 tgcatttgtgcatgtgtgtg 180720



to top

>gb|AC099575.10| Mus musculus chromosome 14, clone RP23-83E2, complete sequence
          Length = 138102

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 274   ttgctaagatggaagaaatgggagccaa 301
             |||||||||||||||| |||||| ||||
Sbjct: 98606 ttgctaagatggaagatatgggaaccaa 98579



to top

>gb|AC117810.8| Mus musculus chromosome 18, clone RP24-571D2, complete sequence
          Length = 207527

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 492    tgcatttgtgcatgtgtgtg 511
              ||||||||||||||||||||
Sbjct: 194652 tgcatttgtgcatgtgtgtg 194633



to top

>gb|AC109245.11| Mus musculus chromosome 1, clone RP23-344F24, complete sequence
          Length = 206211

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 492  tgcatttgtgcatgtgtgtg 511
            ||||||||||||||||||||
Sbjct: 4121 tgcatttgtgcatgtgtgtg 4140



to top

>emb|AL137794.5| Human DNA sequence from clone RP5-1070A16 on chromosome 1p21.2-22.2
             Contains a novel gene, complete sequence
          Length = 137895

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   ggtcaagttatgttaatgtg 415
             ||||||||||||||||||||
Sbjct: 50931 ggtcaagttatgttaatgtg 50950



to top

>emb|AL121761.5|HSJ122P22 Human DNA sequence from clone RP1-122P22 on chromosome 20 Contains
            the 3' end the SLC24A3 gene for solute carrier family 24
            (sodium/potassium/calcium exchanger) member 3, a novel
            gene and a CpG island, complete sequence
          Length = 118990

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 492  tgcatttgtgcatgtgtgtg 511
            ||||||||||||||||||||
Sbjct: 7841 tgcatttgtgcatgtgtgtg 7822



to top

>gb|AC023602.5| Homo sapiens 3 BAC RP11-16N5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 96959

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 70460 tgcatttgtgcatgtgtgtg 70479



to top

>ref|NM_001033439.2| Mus musculus leucine-rich repeats and calponin homology (CH) domain
            containing 1 (Lrch1), mRNA
          Length = 4707

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   aagaggatgctcactggcac 82
            ||||||||||||||||||||
Sbjct: 1461 aagaggatgctcactggcac 1480



to top

>gb|AC157606.5| Mus musculus chromosome 7, clone RP23-466J2, complete sequence
          Length = 174676

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 78324 tgcatttgtgcatgtgtgtg 78305



to top

>emb|BX247869.21| Zebrafish DNA sequence from clone CH211-67D2 in linkage group 21,
              complete sequence
          Length = 181119

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 492    tgcatttgtgcatgtgtgtg 511
              ||||||||||||||||||||
Sbjct: 156769 tgcatttgtgcatgtgtgtg 156750



to top

>gb|AC055733.16| Homo sapiens 3 BAC RP11-39E3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 193425

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 461    ccatgtgtttgtctgaatta 480
              ||||||||||||||||||||
Sbjct: 134229 ccatgtgtttgtctgaatta 134210



to top

>gb|AC153566.12| Mus musculus 10 BAC RP23-5H4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 208610

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 67570 tgcatttgtgcatgtgtgtg 67551



to top

>dbj|AK136026.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
            enriched library, clone:7420448N11 product:calponin
            homology (CH) domain containing 1, full insert sequence
          Length = 2789

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   aagaggatgctcactggcac 82
            ||||||||||||||||||||
Sbjct: 1067 aagaggatgctcactggcac 1086



to top

>dbj|AK143909.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
            library, clone:F520010F19 product:calponin homology (CH)
            domain containing 1, full insert sequence
          Length = 3125

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   aagaggatgctcactggcac 82
            ||||||||||||||||||||
Sbjct: 1460 aagaggatgctcactggcac 1479



to top

>dbj|AK160902.1| Mus musculus 18 days pregnant adult female placenta and extra
           embryonic tissue cDNA, RIKEN full-length enriched
           library, clone:3830403E13 product:calponin homology (CH)
           domain containing 1, full insert sequence
          Length = 2585

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 63  aagaggatgctcactggcac 82
           ||||||||||||||||||||
Sbjct: 837 aagaggatgctcactggcac 856



to top

>gb|AC154225.2| Mus musculus BAC clone RP24-352F3 from chromosome 13, complete sequence
          Length = 157586

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 487    tgttatgcatttgtgcatgtgtgt 510
              |||||||||||||||||| |||||
Sbjct: 112853 tgttatgcatttgtgcatatgtgt 112876



to top

>gb|AC122024.6| Mus musculus BAC clone RP24-378K7 from chromosome 10, complete sequence
          Length = 183904

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 43701 tgcatttgtgcatgtgtgtg 43720



to top

>gb|AC164979.2| Mus musculus BAC clone RP23-244J23 from chromosome 16, complete sequence
          Length = 202286

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 492    tgcatttgtgcatgtgtgtg 511
              ||||||||||||||||||||
Sbjct: 130799 tgcatttgtgcatgtgtgtg 130818



to top

>gb|AC110527.13| Mus musculus chromosome 1, clone RP23-204H10, complete sequence
          Length = 173497

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 44867 tgcatttgtgcatgtgtgtg 44848



to top

>gb|AC154600.3| Mus musculus BAC clone RP23-338O2 from chromosome 14, complete sequence
          Length = 173591

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 274   ttgctaagatggaagaaatgggagccaa 301
             |||||||||||||||| |||||| ||||
Sbjct: 27583 ttgctaagatggaagatatgggaaccaa 27556



to top

>gb|AC154621.2| Mus musculus BAC clone RP23-323P15 from chromosome 14, complete sequence
          Length = 211243

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     aagaggatgctcactggcac 82
              ||||||||||||||||||||
Sbjct: 185941 aagaggatgctcactggcac 185922



to top

>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome
          Length = 2160842

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 274     ttgctaagatggaagaaatgggag 297
               |||||||| |||||||||||||||
Sbjct: 1018012 ttgctaagttggaagaaatgggag 1018035



to top

>emb|BX005079.6| Zebrafish DNA sequence from clone CH211-176D9, complete sequence
          Length = 157845

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 16688 tgcatttgtgcatgtgtgtg 16669



to top

>dbj|AK129264.1| Mus musculus mRNA for mKIAA1016 protein
          Length = 4695

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 63   aagaggatgctcactggcac 82
            ||||||||||||||||||||
Sbjct: 1450 aagaggatgctcactggcac 1469



to top

>gb|AC154341.2| Mus musculus BAC clone RP23-240C2 from 16, complete sequence
          Length = 163871

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 348  ctagtatggatgccattcac 367
            ||||||||||||||||||||
Sbjct: 6096 ctagtatggatgccattcac 6115



to top

>emb|Z49936.1|CEF13B10 Caenorhabditis elegans Cosmid F13B10, complete sequence
          Length = 36812

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 500   tgcatgtgtgtgagctcaca 519
             ||||||||||||||||||||
Sbjct: 34476 tgcatgtgtgtgagctcaca 34495



to top

>emb|AL136504.2|HS139I22 Homo sapiens chromosome 3 sequence from BAC 139I22 map 3q21 region
              D3S3607-D3S1587, complete sequence
          Length = 184983

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 461    ccatgtgtttgtctgaatta 480
              ||||||||||||||||||||
Sbjct: 111755 ccatgtgtttgtctgaatta 111736



to top

>gb|AC132147.4| Mus musculus BAC clone RP23-2F11 from 8, complete sequence
          Length = 237167

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 99174 tgcatttgtgcatgtgtgtg 99155



to top

>emb|CT027602.9| Mouse DNA sequence from clone RP24-359G24 on chromosome 16, complete
              sequence
          Length = 194283

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 492    tgcatttgtgcatgtgtgtg 511
              ||||||||||||||||||||
Sbjct: 153251 tgcatttgtgcatgtgtgtg 153270



to top

>emb|Z35604.2|CEZK1058 Caenorhabditis elegans Cosmid ZK1058, complete sequence
          Length = 29101

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 500  tgcatgtgtgtgagctcaca 519
            ||||||||||||||||||||
Sbjct: 5566 tgcatgtgtgtgagctcaca 5585



to top

>emb|AL845473.7| Mouse DNA sequence from clone RP23-212E8 on chromosome 2, complete
              sequence
          Length = 189998

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 494    catttgtgcatgtgtgtgag 513
              ||||||||||||||||||||
Sbjct: 112696 catttgtgcatgtgtgtgag 112715



to top

>emb|AL807737.12| Mouse DNA sequence from clone RP23-386N10 on chromosome 4, complete
             sequence
          Length = 84442

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 48227 tgcatttgtgcatgtgtgtg 48246



to top

>gb|AC122380.4| Mus musculus BAC clone RP23-476C23 from 10, complete sequence
          Length = 210627

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    ctaagatggaagaaatggga 296
              ||||||||||||||||||||
Sbjct: 193211 ctaagatggaagaaatggga 193192



to top

>gb|AC132373.4| Mus musculus BAC clone RP23-480H8 from 1, complete sequence
          Length = 192562

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 491   atgcatttgtgcatgtgtgt 510
             ||||||||||||||||||||
Sbjct: 82794 atgcatttgtgcatgtgtgt 82813



to top

>gb|AC140553.3| Mus musculus BAC clone RP24-71M17 from 1, complete sequence
          Length = 217538

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 492    tgcatttgtgcatgtgtgtg 511
              ||||||||||||||||||||
Sbjct: 138845 tgcatttgtgcatgtgtgtg 138826



to top

>gb|AC135673.5| Mus musculus BAC clone RP24-279A17 from 16, complete sequence
          Length = 173965

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 492    tgcatttgtgcatgtgtgtg 511
              ||||||||||||||||||||
Sbjct: 147782 tgcatttgtgcatgtgtgtg 147801



to top

>emb|AL844168.5| Mouse DNA sequence from clone RP23-413G9 on chromosome 4, complete
             sequence
          Length = 143572

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   ttgctaagatggaagaaatg 293
             ||||||||||||||||||||
Sbjct: 76197 ttgctaagatggaagaaatg 76178



to top

>gb|AF010583.1|AF010583 Oryza sativa 2-oxoglutarate/malate translocator mRNA, partial cds
          Length = 949

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 421 acaataagttgttgaatgtt 440
           ||||||||||||||||||||
Sbjct: 890 acaataagttgttgaatgtt 909



to top

>gb|AC173341.1| Mus musculus BAC clone RP24-332P6 from chromosome 9, complete sequence
          Length = 149387

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 492    tgcatttgtgcatgtgtgtgagctcaca 519
              ||||| |||||||||||||| |||||||
Sbjct: 108891 tgcatgtgtgcatgtgtgtgtgctcaca 108918



to top

>emb|AL732321.18| Mouse DNA sequence from clone RP23-167N17 on chromosome X, complete
              sequence
          Length = 216244

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 494    catttgtgcatgtgtgtgag 513
              ||||||||||||||||||||
Sbjct: 128381 catttgtgcatgtgtgtgag 128362



to top

>emb|AL670951.6| Mouse DNA sequence from clone RP23-6N18 on chromosome 2, complete
             sequence
          Length = 207571

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 62420 tgcatttgtgcatgtgtgtg 62439



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 62364 tgcatttgtgcatgtgtgtg 62383



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 62308 tgcatttgtgcatgtgtgtg 62327



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 62290 tgcatttgtgcatgtgtgtg 62309



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 62234 tgcatttgtgcatgtgtgtg 62253



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   tgcatttgtgcatgtgtgtg 511
             ||||||||||||||||||||
Sbjct: 62178 tgcatttgtgcatgtgtgtg 62197



to top

>emb|AJ403665.1|MMU403665 M.musculus DNA for GFAP-binding fragment GFAPE23
          Length = 390

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 239 ttgttgtttcccctgtattc 258
           ||||||||||||||||||||
Sbjct: 198 ttgttgtttcccctgtattc 179


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,871,522
Number of Sequences: 3902068
Number of extensions: 5871522
Number of successful extensions: 168162
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 167659
Number of HSP's gapped (non-prelim): 500
length of query: 522
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 499
effective length of database: 17,143,297,704
effective search space: 8554505554296
effective search space used: 8554505554296
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top