ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd22b14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_185391.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3358 Score = 551 bits (278), Expect = e-154 Identities = 486/554 (87%), Gaps = 1/554 (0%) Strand = Plus / Plus Query: 6 gcaatgggagacctagnatgcattcttccctgcagctacacgtgaatatgctccagttgt 65 |||||||||||||| | |||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 2214 gcaatgggagacctcg-atgcattcttccctgcagctacgcgtgaatatgctccaattgt 2272 Query: 66 tgatgagttgtggaagcatcctgccatacaagcaacatataaaagaaaggacgaattgta 125 ||| || |||||||| ||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 2273 tgaggaaatgtggaaggatcctgccatacaagcaacatataaaagaaaagacgaattgca 2332 Query: 126 ttttctccctgatgttgctgaatatttcttaagcagggccattgaagtatcaagcaatga 185 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 2333 ttttctccctgatgttgccgaatatttcttgagcagggccattgaagtatcaagtaatga 2392 Query: 186 gtatgaaccttcagagaaagatgtgatatatgctgaaggagtatcacaagggaatggatt 245 |||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||| Sbjct: 2393 gtatgaaccttcagagaaagatataatatatgctgaaggagtaacacaagggaatggatt 2452 Query: 246 ggcctttattgacttcactctggacgaacggagccctatgtcagaactttatggtgacag 305 ||||| ||||| || |||||||| || || ||||||||||||||| | || ||||| Sbjct: 2453 agccttcattgagtttactctggatgaccgtagccctatgtcagaaatgtacactgacaa 2512 Query: 306 tcatgacccaagctctcaggcacaaaacaaatatcagctgatcagagtaaacgccaaggg 365 |||||| || ||||||| ||| |||||||||||||||||| ||||||| |||||||| Sbjct: 2513 tcatgagcctcactctcagacactaaacaaatatcagctgattagagtaagtgccaaggg 2572 Query: 366 cttgaatgagggctgcaaatgggtggaaatgtttgaggatgtccgcgcggtgatattctc 425 |||||||||| ||||| |||||||||||||||||||||||| || ||| |||||||| Sbjct: 2573 aatgaatgagggatgcaagtgggtggaaatgtttgaggatgtcagcatggtaatattctc 2632 Query: 426 cgtagcactcagcgattatgaccagctgggagcccctgctagtggcagcagcagacgcct 485 ||||||||||| || |||||||||||||| |||||| | ||||| ||| ||| | ||| Sbjct: 2633 ggtagcactcagtgactatgaccagctgggggccccttcaagtggtggcaacagtcccct 2692 Query: 486 cgagaataagatgattcagagcagggacttgtttgaggacacaatcaggcacccgtcttt 545 | |||||||||||| || ||||||||||||||||||| ||||||||||| || | ||| Sbjct: 2693 tgtgaataagatgatccaaagcagggacttgtttgaggctacaatcaggcaaccatgttt 2752 Query: 546 ccgtgacacgccat 559 ||| |||| ||||| Sbjct: 2753 ccgcgacatgccat 2766
>dbj|AK071761.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108P13, full insert sequence Length = 2374 Score = 551 bits (278), Expect = e-154 Identities = 486/554 (87%), Gaps = 1/554 (0%) Strand = Plus / Plus Query: 6 gcaatgggagacctagnatgcattcttccctgcagctacacgtgaatatgctccagttgt 65 |||||||||||||| | |||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 1125 gcaatgggagacctcg-atgcattcttccctgcagctacgcgtgaatatgctccaattgt 1183 Query: 66 tgatgagttgtggaagcatcctgccatacaagcaacatataaaagaaaggacgaattgta 125 ||| || |||||||| ||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 1184 tgaggaaatgtggaaggatcctgccatacaagcaacatataaaagaaaagacgaattgca 1243 Query: 126 ttttctccctgatgttgctgaatatttcttaagcagggccattgaagtatcaagcaatga 185 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 1244 ttttctccctgatgttgccgaatatttcttgagcagggccattgaagtatcaagtaatga 1303 Query: 186 gtatgaaccttcagagaaagatgtgatatatgctgaaggagtatcacaagggaatggatt 245 |||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||| Sbjct: 1304 gtatgaaccttcagagaaagatataatatatgctgaaggagtaacacaagggaatggatt 1363 Query: 246 ggcctttattgacttcactctggacgaacggagccctatgtcagaactttatggtgacag 305 ||||| ||||| || |||||||| || || ||||||||||||||| | || ||||| Sbjct: 1364 agccttcattgagtttactctggatgaccgtagccctatgtcagaaatgtacactgacaa 1423 Query: 306 tcatgacccaagctctcaggcacaaaacaaatatcagctgatcagagtaaacgccaaggg 365 |||||| || ||||||| ||| |||||||||||||||||| ||||||| |||||||| Sbjct: 1424 tcatgagcctcactctcagacactaaacaaatatcagctgattagagtaagtgccaaggg 1483 Query: 366 cttgaatgagggctgcaaatgggtggaaatgtttgaggatgtccgcgcggtgatattctc 425 |||||||||| ||||| |||||||||||||||||||||||| || ||| |||||||| Sbjct: 1484 aatgaatgagggatgcaagtgggtggaaatgtttgaggatgtcagcatggtaatattctc 1543 Query: 426 cgtagcactcagcgattatgaccagctgggagcccctgctagtggcagcagcagacgcct 485 ||||||||||| || |||||||||||||| |||||| | ||||| ||| ||| | ||| Sbjct: 1544 ggtagcactcagtgactatgaccagctgggggccccttcaagtggtggcaacagtcccct 1603 Query: 486 cgagaataagatgattcagagcagggacttgtttgaggacacaatcaggcacccgtcttt 545 | |||||||||||| || ||||||||||||||||||| ||||||||||| || | ||| Sbjct: 1604 tgtgaataagatgatccaaagcagggacttgtttgaggctacaatcaggcaaccatgttt 1663 Query: 546 ccgtgacacgccat 559 ||| |||| ||||| Sbjct: 1664 ccgcgacatgccat 1677
>dbj|AK069834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031J07, full insert sequence Length = 3358 Score = 551 bits (278), Expect = e-154 Identities = 486/554 (87%), Gaps = 1/554 (0%) Strand = Plus / Plus Query: 6 gcaatgggagacctagnatgcattcttccctgcagctacacgtgaatatgctccagttgt 65 |||||||||||||| | |||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 2214 gcaatgggagacctcg-atgcattcttccctgcagctacgcgtgaatatgctccaattgt 2272 Query: 66 tgatgagttgtggaagcatcctgccatacaagcaacatataaaagaaaggacgaattgta 125 ||| || |||||||| ||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 2273 tgaggaaatgtggaaggatcctgccatacaagcaacatataaaagaaaagacgaattgca 2332 Query: 126 ttttctccctgatgttgctgaatatttcttaagcagggccattgaagtatcaagcaatga 185 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 2333 ttttctccctgatgttgccgaatatttcttgagcagggccattgaagtatcaagtaatga 2392 Query: 186 gtatgaaccttcagagaaagatgtgatatatgctgaaggagtatcacaagggaatggatt 245 |||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||| Sbjct: 2393 gtatgaaccttcagagaaagatataatatatgctgaaggagtaacacaagggaatggatt 2452 Query: 246 ggcctttattgacttcactctggacgaacggagccctatgtcagaactttatggtgacag 305 ||||| ||||| || |||||||| || || ||||||||||||||| | || ||||| Sbjct: 2453 agccttcattgagtttactctggatgaccgtagccctatgtcagaaatgtacactgacaa 2512 Query: 306 tcatgacccaagctctcaggcacaaaacaaatatcagctgatcagagtaaacgccaaggg 365 |||||| || ||||||| ||| |||||||||||||||||| ||||||| |||||||| Sbjct: 2513 tcatgagcctcactctcagacactaaacaaatatcagctgattagagtaagtgccaaggg 2572 Query: 366 cttgaatgagggctgcaaatgggtggaaatgtttgaggatgtccgcgcggtgatattctc 425 |||||||||| ||||| |||||||||||||||||||||||| || ||| |||||||| Sbjct: 2573 aatgaatgagggatgcaagtgggtggaaatgtttgaggatgtcagcatggtaatattctc 2632 Query: 426 cgtagcactcagcgattatgaccagctgggagcccctgctagtggcagcagcagacgcct 485 ||||||||||| || |||||||||||||| |||||| | ||||| ||| ||| | ||| Sbjct: 2633 ggtagcactcagtgactatgaccagctgggggccccttcaagtggtggcaacagtcccct 2692 Query: 486 cgagaataagatgattcagagcagggacttgtttgaggacacaatcaggcacccgtcttt 545 | |||||||||||| || ||||||||||||||||||| ||||||||||| || | ||| Sbjct: 2693 tgtgaataagatgatccaaagcagggacttgtttgaggctacaatcaggcaaccatgttt 2752 Query: 546 ccgtgacacgccat 559 ||| |||| ||||| Sbjct: 2753 ccgcgacatgccat 2766
>gb|AY106705.1| Zea mays PCO134033 mRNA sequence Length = 621 Score = 309 bits (156), Expect = 5e-81 Identities = 250/280 (89%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 12 ggagacctagnatgcattcttccctgcagctacacgtgaatatgctccagttgttgatga 71 |||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 217 ggagacctag-atacattcttccctgcagctacccgtgaatatgctccagttgttgatga 275 Query: 72 gttgtggaagcatcctgccatacaagcaacatataaaagaaaggacgaattgtattttct 131 ||||||||| |||||||||| ||||||||||| ||||||||||| |||||| ||||||| Sbjct: 276 gttgtggaaagatcctgccattcaagcaacatacaaaagaaaggatgaattgcattttct 335 Query: 132 ccctgatgttgctgaatatttcttaagcagggccattgaagtatcaagcaatgagtatga 191 |||||||| |||||| || ||||| |||||||| ||||||||||||| || || || || Sbjct: 336 ccctgatgctgctgagtacttcttgagcagggctgttgaagtatcaagtaacgaatacga 395 Query: 192 accttcagagaaagatgtgatatatgctgaaggagtatcacaagggaatggattggcctt 251 ||| ||||||||||| |||||||| ||||| |||||| |||||||||| ||||||||||| Sbjct: 396 accgtcagagaaagacgtgatatacgctgagggagtaacacaagggaacggattggcctt 455 Query: 252 tattgacttcactctggacgaacggagccctatgtcagaa 291 ||||||||||| |||| || |||||||||||||||||| Sbjct: 456 cattgacttcaccttggatgaccggagccctatgtcagaa 495 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 330 aaacaaatatcagctgatcagagtaaacgccaagggcttgaatgagggctgcaaatgggt 389 |||||| || |||||||| ||||| | |||||||||| |||| ||||||||||| ||||| Sbjct: 537 aaacaagtaccagctgattagagtgagcgccaagggcatgaacgagggctgcaagtgggt 596 Query: 390 gga 392 ||| Sbjct: 597 gga 599
>dbj|AK069964.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039G05, full insert sequence Length = 3272 Score = 276 bits (139), Expect = 7e-71 Identities = 211/235 (89%) Strand = Plus / Plus Query: 23 atgcattcttccctgcagctacacgtgaatatgctccagttgttgatgagttgtggaagc 82 |||| ||||||||||| || || || ||||| |||||| ||||||||||| |||||||| Sbjct: 1924 atgctttcttccctgccgcaacgcgagaatacgctccatttgttgatgagatgtggaagg 1983 Query: 83 atcctgccatacaagcaacatataaaagaaaggacgaattgtattttctccctgatgttg 142 ||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||| Sbjct: 1984 atcctgccatacaagcaacatataaaagaaaggacgaattgcatttccttcctgatgttg 2043 Query: 143 ctgaatatttcttaagcagggccattgaagtatcaagcaatgagtatgaaccttcagaga 202 |||| || ||||| |||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 2044 ctgagtacttcttgagcagggccattgaggtatcgagcaatgagtatgaaccttcagaga 2103 Query: 203 aagatgtgatatatgctgaaggagtatcacaagggaatggattggcctttattga 257 |||||||||| | ||||||||| ||| ||||||||||||| ||||| || ||||| Sbjct: 2104 aagatgtgatctttgctgaaggtgtaacacaagggaatgggttggctttcattga 2158 Score = 129 bits (65), Expect = 1e-26 Identities = 104/117 (88%) Strand = Plus / Plus Query: 333 caaatatcagctgatcagagtaaacgccaagggcttgaatgagggctgcaaatgggtgga 392 |||||||||| |||| ||||||| ||||||||| ||||||| |||||||| |||||||| Sbjct: 2234 caaatatcagttgattagagtaagtgccaagggcatgaatgatggctgcaagtgggtgga 2293 Query: 393 aatgtttgaggatgtccgcgcggtgatattctccgtagcactcagcgattatgacca 449 ||||||||||||||||||| |||||||||||| ||||| ||||| || |||||||| Sbjct: 2294 aatgtttgaggatgtccgcatggtgatattctctgtagccctcagtgactatgacca 2350
>dbj|AK119192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-B11, full insert sequence Length = 1730 Score = 268 bits (135), Expect = 2e-68 Identities = 210/235 (89%) Strand = Plus / Plus Query: 23 atgcattcttccctgcagctacacgtgaatatgctccagttgttgatgagttgtggaagc 82 |||| ||||||||||| | || || ||||| |||||| ||||||||||| |||||||| Sbjct: 583 atgctttcttccctgcctcaacgcgagaatacgctccatttgttgatgagatgtggaagg 642 Query: 83 atcctgccatacaagcaacatataaaagaaaggacgaattgtattttctccctgatgttg 142 ||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||| Sbjct: 643 atcctgccatacaagcaacatataaaagaaaggacgaattgcatttccttcctgatgttg 702 Query: 143 ctgaatatttcttaagcagggccattgaagtatcaagcaatgagtatgaaccttcagaga 202 |||| || ||||| |||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 703 ctgagtacttcttgagcagggccattgaggtatcgagcaatgagtatgaaccttcagaga 762 Query: 203 aagatgtgatatatgctgaaggagtatcacaagggaatggattggcctttattga 257 |||||||||| | ||||||||| ||| ||||||||||||| ||||| || ||||| Sbjct: 763 aagatgtgatctttgctgaaggtgtaacacaagggaatgggttggctttcattga 817 Score = 129 bits (65), Expect = 1e-26 Identities = 104/117 (88%) Strand = Plus / Plus Query: 333 caaatatcagctgatcagagtaaacgccaagggcttgaatgagggctgcaaatgggtgga 392 |||||||||| |||| ||||||| ||||||||| ||||||| |||||||| |||||||| Sbjct: 893 caaatatcagttgattagagtaagtgccaagggcatgaatgatggctgcaagtgggtgga 952 Query: 393 aatgtttgaggatgtccgcgcggtgatattctccgtagcactcagcgattatgacca 449 ||||||||||||||||||| |||||||||||| ||||| ||||| || |||||||| Sbjct: 953 aatgtttgaggatgtccgcatggtgatattctctgtagccctcagtgactatgacca 1009
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 210 bits (106), Expect = 4e-51 Identities = 146/158 (92%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 6 gcaatgggagacctagnatgcattcttccctgcagctacacgtgaatatgctccagttgt 65 |||||||||||||| | |||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 635510 gcaatgggagacctcg-atgcattcttccctgcagctacgcgtgaatatgctccaattgt 635452 Query: 66 tgatgagttgtggaagcatcctgccatacaagcaacatataaaagaaaggacgaattgta 125 ||| || |||||||| ||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 635451 tgaggaaatgtggaaggatcctgccatacaagcaacatataaaagaaaagacgaattgca 635392 Query: 126 ttttctccctgatgttgctgaatatttcttaagcaggg 163 |||||||||||||||||| ||||||||||| ||||||| Sbjct: 635391 ttttctccctgatgttgccgaatatttcttgagcaggg 635354 Score = 172 bits (87), Expect = 8e-40 Identities = 171/199 (85%) Strand = Plus / Minus Query: 336 atatcagctgatcagagtaaacgccaagggcttgaatgagggctgcaaatgggtggaaat 395 |||||||||||| ||||||| |||||||| |||||||||| ||||| ||||||||||| Sbjct: 634543 atatcagctgattagagtaagtgccaagggaatgaatgagggatgcaagtgggtggaaat 634484 Query: 396 gtttgaggatgtccgcgcggtgatattctccgtagcactcagcgattatgaccagctggg 455 ||||||||||||| || ||| |||||||| ||||||||||| || |||||||||||||| Sbjct: 634483 gtttgaggatgtcagcatggtaatattctcggtagcactcagtgactatgaccagctggg 634424 Query: 456 agcccctgctagtggcagcagcagacgcctcgagaataagatgattcagagcagggactt 515 |||||| | ||||| ||| ||| | ||| | |||||||||||| || ||||||||||| Sbjct: 634423 ggccccttcaagtggtggcaacagtccccttgtgaataagatgatccaaagcagggactt 634364 Query: 516 gtttgaggacacaatcagg 534 |||||||| ||||||||| Sbjct: 634363 gtttgaggctacaatcagg 634345 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 162 ggccattgaagtatcaagcaatgagtatgaaccttcagagaaagatgtgatatatgctga 221 |||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||| Sbjct: 635037 ggccattgaagtatcaagtaatgagtatgaaccttcagagaaagatataatatatgctga 634978 Query: 222 aggagtatcacaagggaatggattggcctttattgacttcactctggacgaacggagccc 281 ||||||| |||||||||||||||| ||||| ||||| || |||||||| || || ||||| Sbjct: 634977 aggagtaacacaagggaatggattagccttcattgagtttactctggatgaccgtagccc 634918 Query: 282 tatgtcagaa 291 |||||||||| Sbjct: 634917 tatgtcagaa 634908
>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC clone:P0029D06 Length = 150120 Score = 210 bits (106), Expect = 4e-51 Identities = 146/158 (92%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 6 gcaatgggagacctagnatgcattcttccctgcagctacacgtgaatatgctccagttgt 65 |||||||||||||| | |||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 41938 gcaatgggagacctcg-atgcattcttccctgcagctacgcgtgaatatgctccaattgt 41880 Query: 66 tgatgagttgtggaagcatcctgccatacaagcaacatataaaagaaaggacgaattgta 125 ||| || |||||||| ||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 41879 tgaggaaatgtggaaggatcctgccatacaagcaacatataaaagaaaagacgaattgca 41820 Query: 126 ttttctccctgatgttgctgaatatttcttaagcaggg 163 |||||||||||||||||| ||||||||||| ||||||| Sbjct: 41819 ttttctccctgatgttgccgaatatttcttgagcaggg 41782 Score = 172 bits (87), Expect = 8e-40 Identities = 171/199 (85%) Strand = Plus / Minus Query: 336 atatcagctgatcagagtaaacgccaagggcttgaatgagggctgcaaatgggtggaaat 395 |||||||||||| ||||||| |||||||| |||||||||| ||||| ||||||||||| Sbjct: 40971 atatcagctgattagagtaagtgccaagggaatgaatgagggatgcaagtgggtggaaat 40912 Query: 396 gtttgaggatgtccgcgcggtgatattctccgtagcactcagcgattatgaccagctggg 455 ||||||||||||| || ||| |||||||| ||||||||||| || |||||||||||||| Sbjct: 40911 gtttgaggatgtcagcatggtaatattctcggtagcactcagtgactatgaccagctggg 40852 Query: 456 agcccctgctagtggcagcagcagacgcctcgagaataagatgattcagagcagggactt 515 |||||| | ||||| ||| ||| | ||| | |||||||||||| || ||||||||||| Sbjct: 40851 ggccccttcaagtggtggcaacagtccccttgtgaataagatgatccaaagcagggactt 40792 Query: 516 gtttgaggacacaatcagg 534 |||||||| ||||||||| Sbjct: 40791 gtttgaggctacaatcagg 40773 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 162 ggccattgaagtatcaagcaatgagtatgaaccttcagagaaagatgtgatatatgctga 221 |||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||| Sbjct: 41465 ggccattgaagtatcaagtaatgagtatgaaccttcagagaaagatataatatatgctga 41406 Query: 222 aggagtatcacaagggaatggattggcctttattgacttcactctggacgaacggagccc 281 ||||||| |||||||||||||||| ||||| ||||| || |||||||| || || ||||| Sbjct: 41405 aggagtaacacaagggaatggattagccttcattgagtttactctggatgaccgtagccc 41346 Query: 282 tatgtcagaa 291 |||||||||| Sbjct: 41345 tatgtcagaa 41336
>gb|AY104583.1| Zea mays PCO092504 mRNA sequence Length = 1093 Score = 182 bits (92), Expect = 8e-43 Identities = 155/176 (88%) Strand = Plus / Plus Query: 67 gatgagttgtggaagcatcctgccatacaagcaacatataaaagaaaggacgaattgtat 126 |||||| |||||||| | || |||||||||||||||| |||||||||||| |||||| || Sbjct: 11 gatgagatgtggaaggaccccgccatacaagcaacatttaaaagaaaggaagaattgcat 70 Query: 127 tttctccctgatgttgctgaatatttcttaagcagggccattgaagtatcaagcaatgag 186 |||||||||||||| ||||| | ||||| ||||||||| |||| || |||||||||||| Sbjct: 71 tttctccctgatgtggctgagcacttcttgagcagggccgttgaggtgtcaagcaatgag 130 Query: 187 tatgaaccttcagagaaagatgtgatatatgctgaaggagtatcacaagggaatgg 242 ||||||||||||||||||||||| || | |||||||||||| ||||||| ||||| Sbjct: 131 tatgaaccttcagagaaagatgtaatcttcgctgaaggagtaacacaaggaaatgg 186 Score = 127 bits (64), Expect = 4e-26 Identities = 124/144 (86%) Strand = Plus / Plus Query: 333 caaatatcagctgatcagagtaaacgccaagggcttgaatgagggctgcaaatgggtgga 392 ||||||||||||||||||||| | || || ||| ||||||| ||||||||||||||||| Sbjct: 277 caaatatcagctgatcagagtcagtgcaaaaggcatgaatgatggctgcaaatgggtgga 336 Query: 393 aatgtttgaggatgtccgcgcggtgatattctccgtagcactcagcgattatgaccagct 452 ||||||||| ||||||||| ||| ||||||| ||||||||||| || |||||||| | Sbjct: 337 aatgtttgaagatgtccgcatggtaatattctgtgtagcactcagtgactatgaccaatt 396 Query: 453 gggagcccctgctagtggcagcag 476 |||| |||||| ||||||||||| Sbjct: 397 gggaccccctgtaagtggcagcag 420
>gb|AC123518.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0088N01, complete sequence Length = 123954 Score = 161 bits (81), Expect = 3e-36 Identities = 126/141 (89%) Strand = Plus / Plus Query: 23 atgcattcttccctgcagctacacgtgaatatgctccagttgttgatgagttgtggaagc 82 |||| ||||||||||| || || || ||||| |||||| ||||||||||| |||||||| Sbjct: 47385 atgctttcttccctgccgcaacgcgagaatacgctccatttgttgatgagatgtggaagg 47444 Query: 83 atcctgccatacaagcaacatataaaagaaaggacgaattgtattttctccctgatgttg 142 ||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||| Sbjct: 47445 atcctgccatacaagcaacatataaaagaaaggacgaattgcatttccttcctgatgttg 47504 Query: 143 ctgaatatttcttaagcaggg 163 |||| || ||||| ||||||| Sbjct: 47505 ctgagtacttcttgagcaggg 47525 Score = 123 bits (62), Expect = 7e-25 Identities = 101/114 (88%) Strand = Plus / Plus Query: 336 atatcagctgatcagagtaaacgccaagggcttgaatgagggctgcaaatgggtggaaat 395 ||||||| |||| ||||||| ||||||||| ||||||| |||||||| ||||||||||| Sbjct: 48239 atatcagttgattagagtaagtgccaagggcatgaatgatggctgcaagtgggtggaaat 48298 Query: 396 gtttgaggatgtccgcgcggtgatattctccgtagcactcagcgattatgacca 449 |||||||||||||||| |||||||||||| ||||| ||||| || |||||||| Sbjct: 48299 gtttgaggatgtccgcatggtgatattctctgtagccctcagtgactatgacca 48352 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Plus Query: 162 ggccattgaagtatcaagcaatgagtatgaaccttcagagaaagatgtgatatatgctga 221 ||||||||| ||||| ||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 47986 ggccattgaggtatcgagcaatgagtatgaaccttcagagaaagatgtgatctttgctga 48045 Query: 222 aggagtatcacaagggaatggattggcctttattga 257 ||| ||| ||||||||||||| ||||| || ||||| Sbjct: 48046 aggtgtaacacaagggaatgggttggctttcattga 48081
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 161 bits (81), Expect = 3e-36 Identities = 126/141 (89%) Strand = Plus / Minus Query: 23 atgcattcttccctgcagctacacgtgaatatgctccagttgttgatgagttgtggaagc 82 |||| ||||||||||| || || || ||||| |||||| ||||||||||| |||||||| Sbjct: 5302830 atgctttcttccctgccgcaacgcgagaatacgctccatttgttgatgagatgtggaagg 5302771 Query: 83 atcctgccatacaagcaacatataaaagaaaggacgaattgtattttctccctgatgttg 142 ||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||| Sbjct: 5302770 atcctgccatacaagcaacatataaaagaaaggacgaattgcatttccttcctgatgttg 5302711 Query: 143 ctgaatatttcttaagcaggg 163 |||| || ||||| ||||||| Sbjct: 5302710 ctgagtacttcttgagcaggg 5302690 Score = 123 bits (62), Expect = 7e-25 Identities = 101/114 (88%) Strand = Plus / Minus Query: 336 atatcagctgatcagagtaaacgccaagggcttgaatgagggctgcaaatgggtggaaat 395 ||||||| |||| ||||||| ||||||||| ||||||| |||||||| ||||||||||| Sbjct: 5301976 atatcagttgattagagtaagtgccaagggcatgaatgatggctgcaagtgggtggaaat 5301917 Query: 396 gtttgaggatgtccgcgcggtgatattctccgtagcactcagcgattatgacca 449 |||||||||||||||| |||||||||||| ||||| ||||| || |||||||| Sbjct: 5301916 gtttgaggatgtccgcatggtgatattctctgtagccctcagtgactatgacca 5301863 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Minus Query: 162 ggccattgaagtatcaagcaatgagtatgaaccttcagagaaagatgtgatatatgctga 221 ||||||||| ||||| ||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 5302229 ggccattgaggtatcgagcaatgagtatgaaccttcagagaaagatgtgatctttgctga 5302170 Query: 222 aggagtatcacaagggaatggattggcctttattga 257 ||| ||| ||||||||||||| ||||| || ||||| Sbjct: 5302169 aggtgtaacacaagggaatgggttggctttcattga 5302134
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 161 bits (81), Expect = 3e-36 Identities = 126/141 (89%) Strand = Plus / Minus Query: 23 atgcattcttccctgcagctacacgtgaatatgctccagttgttgatgagttgtggaagc 82 |||| ||||||||||| || || || ||||| |||||| ||||||||||| |||||||| Sbjct: 5369307 atgctttcttccctgccgcaacgcgagaatacgctccatttgttgatgagatgtggaagg 5369248 Query: 83 atcctgccatacaagcaacatataaaagaaaggacgaattgtattttctccctgatgttg 142 ||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||| Sbjct: 5369247 atcctgccatacaagcaacatataaaagaaaggacgaattgcatttccttcctgatgttg 5369188 Query: 143 ctgaatatttcttaagcaggg 163 |||| || ||||| ||||||| Sbjct: 5369187 ctgagtacttcttgagcaggg 5369167 Score = 123 bits (62), Expect = 7e-25 Identities = 101/114 (88%) Strand = Plus / Minus Query: 336 atatcagctgatcagagtaaacgccaagggcttgaatgagggctgcaaatgggtggaaat 395 ||||||| |||| ||||||| ||||||||| ||||||| |||||||| ||||||||||| Sbjct: 5368453 atatcagttgattagagtaagtgccaagggcatgaatgatggctgcaagtgggtggaaat 5368394 Query: 396 gtttgaggatgtccgcgcggtgatattctccgtagcactcagcgattatgacca 449 |||||||||||||||| |||||||||||| ||||| ||||| || |||||||| Sbjct: 5368393 gtttgaggatgtccgcatggtgatattctctgtagccctcagtgactatgacca 5368340 Score = 119 bits (60), Expect = 1e-23 Identities = 87/96 (90%) Strand = Plus / Minus Query: 162 ggccattgaagtatcaagcaatgagtatgaaccttcagagaaagatgtgatatatgctga 221 ||||||||| ||||| ||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 5368706 ggccattgaggtatcgagcaatgagtatgaaccttcagagaaagatgtgatctttgctga 5368647 Query: 222 aggagtatcacaagggaatggattggcctttattga 257 ||| ||| ||||||||||||| ||||| || ||||| Sbjct: 5368646 aggtgtaacacaagggaatgggttggctttcattga 5368611
>ref|NM_102929.2| Arabidopsis thaliana guanyl nucleotide binding / signal transducer AT1G31930 transcript variant AT1G31930.1 mRNA, complete cds Length = 3067 Score = 101 bits (51), Expect = 2e-18 Identities = 129/155 (83%) Strand = Plus / Plus Query: 43 acacgtgaatatgctccagttgttgatgagttgtggaagcatcctgccatacaagcaaca 102 |||||||||||||||||| | ||||| || | ||||| |||| || |||||||||||| Sbjct: 1976 acacgtgaatatgctccattggttgaagaagtttggaaagatccggctatacaagcaaca 2035 Query: 103 tataaaagaaaggacgaattgtattttctccctgatgttgctgaatatttcttaagcagg 162 |||| | |||| || || || |||| || |||||||| || ||||| ||||||||| || Sbjct: 2036 tatagacgaaaagatgagctgcatttccttcctgatgtcgcggaatacttcttaagccgg 2095 Query: 163 gccattgaagtatcaagcaatgagtatgaaccttc 197 ||||| |||||||| |||||||||||||| ||||| Sbjct: 2096 gccatggaagtatcgagcaatgagtatgagccttc 2130 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 352 gtaaacgccaagggcttgaatgagggctgcaaatgggtggaaatgtttgaggatgt 407 |||||||| ||||| |||| || ||||||||||||| ||||||||||| ||||| Sbjct: 2285 gtaaacgcaaagggaatgaacgatagctgcaaatgggtagaaatgtttgaagatgt 2340
>ref|NM_179406.1| Arabidopsis thaliana guanyl nucleotide binding / signal transducer AT1G31930 transcript variant AT1G31930.2 mRNA, complete cds Length = 3040 Score = 101 bits (51), Expect = 2e-18 Identities = 129/155 (83%) Strand = Plus / Plus Query: 43 acacgtgaatatgctccagttgttgatgagttgtggaagcatcctgccatacaagcaaca 102 |||||||||||||||||| | ||||| || | ||||| |||| || |||||||||||| Sbjct: 1949 acacgtgaatatgctccattggttgaagaagtttggaaagatccggctatacaagcaaca 2008 Query: 103 tataaaagaaaggacgaattgtattttctccctgatgttgctgaatatttcttaagcagg 162 |||| | |||| || || || |||| || |||||||| || ||||| ||||||||| || Sbjct: 2009 tatagacgaaaagatgagctgcatttccttcctgatgtcgcggaatacttcttaagccgg 2068 Query: 163 gccattgaagtatcaagcaatgagtatgaaccttc 197 ||||| |||||||| |||||||||||||| ||||| Sbjct: 2069 gccatggaagtatcgagcaatgagtatgagccttc 2103 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Plus Query: 352 gtaaacgccaagggcttgaatgagggctgcaaatgggtggaaatgtttgaggatgt 407 |||||||| ||||| |||| || ||||||||||||| ||||||||||| ||||| Sbjct: 2258 gtaaacgcaaagggaatgaacgatagctgcaaatgggtagaaatgtttgaagatgt 2313
>gb|DQ160038.1| Taraxacum officinale TO37-3 (To37-3) mRNA, partial cds Length = 371 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 336 atatcagctgatcagagtaaacgccaagggcttgaatgagggctgcaaatgggtggaaat 395 |||||| ||||| ||||||||||||||||| |||| || || ||| |||||||||||| Sbjct: 154 atatcaactgattagagtaaacgccaagggaatgaacgaagggtgccgatgggtggaaat 213 Query: 396 gtttgaggatgt 407 |||||| ||||| Sbjct: 214 gtttgaagatgt 225 Score = 42.1 bits (21), Expect = 1.9 Identities = 84/105 (80%) Strand = Plus / Plus Query: 187 tatgaaccttcagagaaagatgtgatatatgctgaaggagtatcacaagggaatggattg 246 ||||||||||||||| | || | |||||||||| |||||| | ||||| ||||| ||| Sbjct: 5 tatgaaccttcagagcacgacatactatatgctgagggagtaactcaaggcaatgggttg 64 Query: 247 gcctttattgacttcactctggacgaacggagccctatgtcagaa 291 || ||||| || ||| | || || || || ||||| ||||||||| Sbjct: 65 gcttttatagaattctcccttgatgaccgtagccccatgtcagaa 109
>gb|AC074309.4|AC074309 Arabidopsis thaliana chromosome 1 BAC T12O21 genomic sequence, complete sequence Length = 75298 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Minus Query: 43 acacgtgaatatgctccagttgttgatgagttgtggaagcatcctgccatacaagcaaca 102 |||||||||||||||||| | ||||| || | ||||| |||| || |||||||||||| Sbjct: 72939 acacgtgaatatgctccattggttgaagaagtttggaaagatccggctatacaagcaaca 72880 Query: 103 tataaaagaaaggacgaattgtattttctccctgatgttgctgaatatttcttaagc 159 |||| | |||| || || || |||| || |||||||| || ||||| ||||||||| Sbjct: 72879 tatagacgaaaagatgagctgcatttccttcctgatgtcgcggaatacttcttaagc 72823 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 162 ggccattgaagtatcaagcaatgagtatgaaccttc 197 |||||| |||||||| |||||||||||||| ||||| Sbjct: 72740 ggccatggaagtatcgagcaatgagtatgagccttc 72705 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Minus Query: 352 gtaaacgccaagggcttgaatgagggctgcaaatgggtggaaatgtttgaggatgt 407 |||||||| ||||| |||| || ||||||||||||| ||||||||||| ||||| Sbjct: 72473 gtaaacgcaaagggaatgaacgatagctgcaaatgggtagaaatgtttgaagatgt 72418
>gb|AC079041.4|AC079041 Arabidopsis thaliana chromosome 1 BAC F5M6 genomic sequence, complete sequence Length = 119420 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Minus Query: 43 acacgtgaatatgctccagttgttgatgagttgtggaagcatcctgccatacaagcaaca 102 |||||||||||||||||| | ||||| || | ||||| |||| || |||||||||||| Sbjct: 21224 acacgtgaatatgctccattggttgaagaagtttggaaagatccggctatacaagcaaca 21165 Query: 103 tataaaagaaaggacgaattgtattttctccctgatgttgctgaatatttcttaagc 159 |||| | |||| || || || |||| || |||||||| || ||||| ||||||||| Sbjct: 21164 tatagacgaaaagatgagctgcatttccttcctgatgtcgcggaatacttcttaagc 21108 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Minus Query: 162 ggccattgaagtatcaagcaatgagtatgaaccttc 197 |||||| |||||||| |||||||||||||| ||||| Sbjct: 21025 ggccatggaagtatcgagcaatgagtatgagccttc 20990 Score = 48.1 bits (24), Expect = 0.031 Identities = 48/56 (85%) Strand = Plus / Minus Query: 352 gtaaacgccaagggcttgaatgagggctgcaaatgggtggaaatgtttgaggatgt 407 |||||||| ||||| |||| || ||||||||||||| ||||||||||| ||||| Sbjct: 20758 gtaaacgcaaagggaatgaacgatagctgcaaatgggtagaaatgtttgaagatgt 20703
>gb|DQ160030.1| Taraxacum officinale TO36-1rc (To36-1rc) mRNA, partial cds Length = 356 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 348 cagagtaaacgccaagggcttgaatgagggctgcaaatgggtggaaatgtttgaggatgt 407 |||||||||||||||||| |||| || || ||| |||||||||||||||||| ||||| Sbjct: 151 cagagtaaacgccaagggaatgaacgaagggtgccgatgggtggaaatgtttgaagatgt 210
>gb|AC156567.3| Mus musculus BAC clone RP23-333F2 from chromosome 13, complete sequence Length = 204778 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 caagcaacatataaaagaaag 114 ||||||||||||||||||||| Sbjct: 193968 caagcaacatataaaagaaag 193948 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 aagcaacatataaaagaaag 114 |||||||||||||||||||| Sbjct: 75920 aagcaacatataaaagaaag 75939
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Minus Query: 31 ttccctgcagctacacgtgaatatgctccagttgttgatgagttgtggaagcatcctgcc 90 ||||||||||||| ||||||||||| ||| | ||||| || | ||||| ||||||| Sbjct: 24907534 ttccctgcagctagtcgtgaatatgcaccaatggttgaggaactatggaaagatcctgct 24907475 Query: 91 atacaagcaacatataa 107 || ||||| |||||||| Sbjct: 24907474 attcaagctacatataa 24907458
>gb|AC156569.3| Mus musculus BAC clone RP23-315K10 from chromosome 13, complete sequence Length = 165570 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 tatcacaagggaatggattgg 247 ||||||||||||||||||||| Sbjct: 78480 tatcacaagggaatggattgg 78500
>dbj|AK067863.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128N09, full insert sequence Length = 2446 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Plus Query: 31 ttccctgcagctacacgtgaatatgctccagttgttgatgagttgtggaagcatcctgcc 90 ||||||||||||| ||||||||||| ||| | ||||| || | ||||| ||||||| Sbjct: 1305 ttccctgcagctagtcgtgaatatgcaccaatggttgaggaactatggaaagatcctgct 1364 Query: 91 atacaagcaacatataa 107 || ||||| |||||||| Sbjct: 1365 attcaagctacatataa 1381
>dbj|AK060570.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-C03, full insert sequence Length = 1239 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Plus Query: 31 ttccctgcagctacacgtgaatatgctccagttgttgatgagttgtggaagcatcctgcc 90 ||||||||||||| ||||||||||| ||| | ||||| || | ||||| ||||||| Sbjct: 93 ttccctgcagctagtcgtgaatatgcaccaatggttgaggaactatggaaagatcctgct 152 Query: 91 atacaagcaacatataa 107 || ||||| |||||||| Sbjct: 153 attcaagctacatataa 169
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Minus Query: 31 ttccctgcagctacacgtgaatatgctccagttgttgatgagttgtggaagcatcctgcc 90 ||||||||||||| ||||||||||| ||| | ||||| || | ||||| ||||||| Sbjct: 24835740 ttccctgcagctagtcgtgaatatgcaccaatggttgaggaactatggaaagatcctgct 24835681 Query: 91 atacaagcaacatataa 107 || ||||| |||||||| Sbjct: 24835680 attcaagctacatataa 24835664
>emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa0010M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132741 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Plus Query: 31 ttccctgcagctacacgtgaatatgctccagttgttgatgagttgtggaagcatcctgcc 90 ||||||||||||| ||||||||||| ||| | ||||| || | ||||| ||||||| Sbjct: 57334 ttccctgcagctagtcgtgaatatgcaccaatggttgaggaactatggaaagatcctgct 57393 Query: 91 atacaagcaacatataa 107 || ||||| |||||||| Sbjct: 57394 attcaagctacatataa 57410
>ref|XM_868890.1| PREDICTED: Bos taurus similar to CG15828-PA, isoform A (LOC616782), mRNA Length = 4162 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 atgcattcttccctgcagct 42 |||||||||||||||||||| Sbjct: 154 atgcattcttccctgcagct 173
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 acgaacggagccctatgtca 288 |||||||||||||||||||| Sbjct: 32051925 acgaacggagccctatgtca 32051944
>gb|AC122004.2| Mus musculus BAC clone RP24-337O4 from 18, complete sequence Length = 133247 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 gagggctgcaaatgggtgga 392 |||||||||||||||||||| Sbjct: 123226 gagggctgcaaatgggtgga 123207
>gb|AC115873.8| Mus musculus, clone RP24-349F22, complete sequence Length = 159466 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 gagggctgcaaatgggtgga 392 |||||||||||||||||||| Sbjct: 132869 gagggctgcaaatgggtgga 132888
>gb|AC159336.13| Mus musculus 10 BAC RP24-430N21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 180454 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 aagcaacatataaaagaaag 114 |||||||||||||||||||| Sbjct: 109277 aagcaacatataaaagaaag 109296
>emb|AL844600.3| Mouse DNA sequence from clone RP24-92D2 on chromosome 4, complete sequence Length = 149318 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 aagcaacatataaaagaaag 114 |||||||||||||||||||| Sbjct: 77364 aagcaacatataaaagaaag 77383
>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete sequence Length = 144306 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 acgaacggagccctatgtca 288 |||||||||||||||||||| Sbjct: 143877 acgaacggagccctatgtca 143896
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 tctcaggcacaaaacaaata 338 |||||||||||||||||||| Sbjct: 2397676 tctcaggcacaaaacaaata 2397657
>gb|AC153852.9| Mus musculus 10 BAC RP23-136F8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222518 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 aagcaacatataaaagaaag 114 |||||||||||||||||||| Sbjct: 2108 aagcaacatataaaagaaag 2127
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 acgaacggagccctatgtca 288 |||||||||||||||||||| Sbjct: 53050 acgaacggagccctatgtca 53069
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 acgaacggagccctatgtca 288 |||||||||||||||||||| Sbjct: 32142437 acgaacggagccctatgtca 32142456
>gb|AC016725.5| Homo sapiens BAC clone RP11-341H1 from 2, complete sequence Length = 164180 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 cccctgctagtggcagcagc 477 |||||||||||||||||||| Sbjct: 153900 cccctgctagtggcagcagc 153881
>gb|AC063919.15| Homo sapiens 3 BAC RP11-71E19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 151196 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 aatatttcttaagcagggcc 165 |||||||||||||||||||| Sbjct: 9459 aatatttcttaagcagggcc 9478
>gb|AY111190.1| Zea mays CL6313_1 mRNA sequence Length = 495 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 526 acaatcaggcacccgtctttccgtgacacgcc 557 ||||||||||| |||| |||||||||||||| Sbjct: 485 acaatcaggcagccgtgcttccgtgacacgcc 454
>gb|AC107227.11| Mus musculus chromosome 5, clone RP23-62B24, complete sequence Length = 119621 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 aaatgggtggaaatgtttga 401 |||||||||||||||||||| Sbjct: 11264 aaatgggtggaaatgtttga 11245
>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome Length = 1895994 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 aaaggacgaattgtattttc 130 |||||||||||||||||||| Sbjct: 1829182 aaaggacgaattgtattttc 1829163
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome Length = 1892819 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 aaaggacgaattgtattttc 130 |||||||||||||||||||| Sbjct: 215612 aaaggacgaattgtattttc 215631
>gb|AC116763.11| Mus musculus chromosome 5, clone RP23-385G21, complete sequence Length = 196521 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 aaatgggtggaaatgtttga 401 |||||||||||||||||||| Sbjct: 54184 aaatgggtggaaatgtttga 54203
>gb|AC161166.7| Mus musculus chromosome 7, clone RP23-26A14, complete sequence Length = 250028 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 aagcaacatataaaagaaag 114 |||||||||||||||||||| Sbjct: 193752 aagcaacatataaaagaaag 193733
>emb|AL928738.8| Mouse DNA sequence from clone RP23-76M15 on chromosome 4, complete sequence Length = 188568 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 aagcaacatataaaagaaag 114 |||||||||||||||||||| Sbjct: 50867 aagcaacatataaaagaaag 50886 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,071,448 Number of Sequences: 3902068 Number of extensions: 5071448 Number of successful extensions: 96268 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 95772 Number of HSP's gapped (non-prelim): 489 length of query: 559 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 536 effective length of database: 17,143,297,704 effective search space: 9188807569344 effective search space used: 9188807569344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
