ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd21m12 |
|---|---|
| Clone Library Name | barley_pub |
>ALA2_PANMI (P34106) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 89.0 bits (219), Expect = 3e-18 Identities = 49/106 (46%), Positives = 66/106 (62%), Gaps = 10/106 (9%) Frame = +1 Query: 106 EELNENVKKVQYAVRGELYLRASELQKEGK---------RIIFTNVGNPHALGQKPLTFP 258 E LN V K +YAVRGE+ + A LQ++ + I++ N+GNP +LGQ+P+TF Sbjct: 8 ENLNPKVLKCEYAVRGEIVIHAQHLQQQLQTQPGSLPFDEILYCNIGNPQSLGQQPVTFF 67 Query: 259 RQVVALCQAPFLLDDPNVGLIFPADAIARAKHYLSLAPG-GLGAYS 393 R+V+ALC P LL+ +F ADAI+RAK LS PG GAYS Sbjct: 68 REVLALCDHPCLLEKEETKSLFSADAISRAKQILSTIPGRATGAYS 113
>ALA2_HORVU (P52894) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 88.2 bits (217), Expect = 4e-18 Identities = 47/106 (44%), Positives = 67/106 (63%), Gaps = 10/106 (9%) Frame = +1 Query: 106 EELNENVKKVQYAVRGELYLRASELQKEGK---------RIIFTNVGNPHALGQKPLTFP 258 + LN V K +YAVRGE+ + A LQ++ K I++ N+GNP +LGQ+P+TF Sbjct: 8 DNLNPKVLKCEYAVRGEIVIHAQRLQEQLKTQPGSLPFDEILYCNIGNPQSLGQQPVTFF 67 Query: 259 RQVVALCQAPFLLDDPNVGLIFPADAIARAKHYLSLAPG-GLGAYS 393 R+V+ALC P LL + +F AD+I+RAK L++ PG GAYS Sbjct: 68 REVLALCDHPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYS 113
>ALAM_YEAST (P52893) Putative alanine aminotransferase, mitochondrial precursor| (EC 2.6.1.2) (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 592 Score = 80.9 bits (198), Expect = 7e-16 Identities = 51/123 (41%), Positives = 69/123 (56%), Gaps = 13/123 (10%) Frame = +1 Query: 64 SGEGEMMGRKALDYEELNENVKKVQYAVRGELYLRASELQKEGK---------RIIFTNV 216 + E + L E++NENV K +YAVRG + +RA EL+ + + RII N+ Sbjct: 100 TSNNEFYPAEQLTLEDVNENVLKAKYAVRGAIPMRAEELKAQLEKDPQSLPFDRIINANI 159 Query: 217 GNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLI----FPADAIARAKHYLSLAPGGLG 384 GNP L QKPLT+ RQV++L Q P LL+ L+ F DAI RAK + G +G Sbjct: 160 GNPQQLQQKPLTYYRQVLSLLQYPELLNQNEQQLVDSKLFKLDAIKRAKSLMEDIGGSVG 219 Query: 385 AYS 393 AYS Sbjct: 220 AYS 222
>ALAT_HUMAN (P24298) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 79.7 bits (195), Expect = 2e-15 Identities = 48/110 (43%), Positives = 66/110 (60%), Gaps = 9/110 (8%) Frame = +1 Query: 91 KALDYEELNENVKKVQYAVRGELYLRASELQKEGKR--------IIFTNVGNPHALGQKP 246 K L + +N V++V+YAVRG + RA EL++E ++ +I N+G+ A+GQ+P Sbjct: 18 KVLTLDGMNPRVRRVEYAVRGPIVQRALELEQELRQGVKKPFTEVIRANIGDAQAMGQRP 77 Query: 247 LTFPRQVVALCQAPFLLDDPNVGLIFPADAIARAKHYLSLAPG-GLGAYS 393 +TF RQV+ALC P LL PN FP DA RA+ L G LGAYS Sbjct: 78 ITFLRQVLALCVNPDLLSSPN----FPDDAKKRAERILQACGGHSLGAYS 123
>ALAT_SCHPO (Q10334) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 505 Score = 79.0 bits (193), Expect = 3e-15 Identities = 46/110 (41%), Positives = 60/110 (54%), Gaps = 12/110 (10%) Frame = +1 Query: 100 DYEELNENVKKVQYAVRGELYLRASELQKE---------GKRIIFTNVGNPHALGQKPLT 252 D LN+ V K YAVRG L + A E+Q + I++ N+GNP +GQ P+T Sbjct: 29 DLNSLNQQVFKANYAVRGALAILADEIQDDLLENPSSYPFSEIVYANIGNPQQMGQSPIT 88 Query: 253 FPRQVVALCQAPFLLDDPN---VGLIFPADAIARAKHYLSLAPGGLGAYS 393 F RQV++LCQ P LLD +FP D + R+K L G LGAYS Sbjct: 89 FVRQVLSLCQYPTLLDHAEEKWFQNLFPTDVVQRSKMLLK-ESGSLGAYS 137
>ALAT_MOUSE (Q8QZR5) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 77.4 bits (189), Expect = 8e-15 Identities = 51/122 (41%), Positives = 71/122 (58%), Gaps = 9/122 (7%) Frame = +1 Query: 55 ISASGEGEMMGRKALDYEELNENVKKVQYAVRGELYLRASELQKEGKR--------IIFT 210 I AS G + K L + +N V++V+YAVRG + RA EL++E ++ +I Sbjct: 8 IQASRNG--LKGKVLTLDTMNPCVRRVEYAVRGPIVQRALELEQELRQGVKKPFTEVIRA 65 Query: 211 NVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLIFPADAIARAKHYLSLAPG-GLGA 387 N+G+ A+GQ+P+TF RQV+ALC P LL P+ FP DA RA+ L G LGA Sbjct: 66 NIGDAQAMGQRPITFFRQVLALCVYPNLLSSPD----FPEDAKRRAERILQACGGHSLGA 121 Query: 388 YS 393 YS Sbjct: 122 YS 123
>ALAT_RAT (P25409) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 77.0 bits (188), Expect = 1e-14 Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 9/110 (8%) Frame = +1 Query: 91 KALDYEELNENVKKVQYAVRGELYLRASELQKEGKR--------IIFTNVGNPHALGQKP 246 K L + +N V++V+YAVRG + RA EL++E ++ +I N+G+ A+GQ+P Sbjct: 18 KVLTLDTMNPCVRRVEYAVRGPIVQRALELEQELRQGVKKPFTEVIRANIGDAQAMGQRP 77 Query: 247 LTFPRQVVALCQAPFLLDDPNVGLIFPADAIARAKHYLSLAPG-GLGAYS 393 +TF RQV+ALC P LL P+ FP DA RA+ L G LGAYS Sbjct: 78 ITFFRQVLALCVYPNLLSSPD----FPEDAKRRAERILQACGGHSLGAYS 123
>ALAT_YEAST (P52892) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 507 Score = 73.9 bits (180), Expect = 8e-14 Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 13/109 (11%) Frame = +1 Query: 106 EELNENVKKVQYAVRGELYLRASELQKEGKR---------IIFTNVGNPHALGQKPLTFP 258 ++LN V K +YAVRG + RA EL++E K+ II N+GNP L QKPLTF Sbjct: 29 KDLNTGVTKAEYAVRGAIPTRADELKEELKKNPEVLPFDDIINANIGNPQQLDQKPLTFT 88 Query: 259 RQVVALCQAPFLLDDPNVGL----IFPADAIARAKHYLSLAPGGLGAYS 393 RQV+A+ + P +L + L +F DA+ RA+ L+ G +GAYS Sbjct: 89 RQVLAILEYPEILRVGHNELASLNLFSRDALERAERLLNDIGGSIGAYS 137
>AAT_MYCTU (P63498) Probable aspartate aminotransferase (EC 2.6.1.1)| (Transaminase A) (ASPAT) Length = 429 Score = 36.2 bits (82), Expect = 0.019 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = +1 Query: 124 VKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALG-QKPLTFPRQVV 270 ++ V Y +RG ++ A+ L+ EG RI+ N+GNP G + P R ++ Sbjct: 34 LQDVLYEIRGPVHQHAARLEAEGHRILKLNIGNPAPFGFEAPDVIMRDII 83
>AAT_MYCBO (P63499) Probable aspartate aminotransferase (EC 2.6.1.1)| (Transaminase A) (ASPAT) Length = 429 Score = 36.2 bits (82), Expect = 0.019 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Frame = +1 Query: 124 VKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALG-QKPLTFPRQVV 270 ++ V Y +RG ++ A+ L+ EG RI+ N+GNP G + P R ++ Sbjct: 34 LQDVLYEIRGPVHQHAARLEAEGHRILKLNIGNPAPFGFEAPDVIMRDII 83
>Y286_HAEIN (P71348) Probable aminotransferase HI0286 (EC 2.6.1.-)| Length = 404 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/41 (34%), Positives = 26/41 (63%) Frame = +1 Query: 115 NENVKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALG 237 ++ ++ V Y +RG ++ A L++EG +I+ N+GNP G Sbjct: 7 SDKLEHVCYDIRGPVHKEALRLEEEGNKILKLNIGNPAPFG 47
>YFBQ_SHIFL (P0A961) Probable aminotransferase yfbQ (EC 2.6.1.-)| Length = 405 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +1 Query: 109 ELNENVKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALG 237 E + ++ V Y +RG + A L++EG +++ N+GNP G Sbjct: 5 EKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFG 47
>YFBQ_ECOLI (P0A959) Probable aminotransferase yfbQ (EC 2.6.1.-)| Length = 405 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +1 Query: 109 ELNENVKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALG 237 E + ++ V Y +RG + A L++EG +++ N+GNP G Sbjct: 5 EKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFG 47
>YFBQ_ECOL6 (P0A960) Probable aminotransferase yfbQ (EC 2.6.1.-)| Length = 405 Score = 35.0 bits (79), Expect = 0.043 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +1 Query: 109 ELNENVKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALG 237 E + ++ V Y +RG + A L++EG +++ N+GNP G Sbjct: 5 EKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFG 47
>CGPB_FUSSO (Q00858) Cutinase gene palindrome-binding protein (PBP)| Length = 457 Score = 34.7 bits (78), Expect = 0.056 Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 4/75 (5%) Frame = +1 Query: 109 ELNENVKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALGQKPLTFPRQVVALCQAP 288 ELNE++ A L L +K+GK IF VG+ H G K P CQA Sbjct: 165 ELNESI-----ASGNPLRLFYRFKKKDGKFAIFETVGHAHIAGSKFAPNPNNQSPFCQAV 219 Query: 289 FLLDDP----NVGLI 321 F++ P N GL+ Sbjct: 220 FMMARPYPTKNAGLL 234
>SYY_CHLMU (Q9PKX8) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 412 Score = 31.6 bits (70), Expect = 0.48 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +1 Query: 34 LCGGAPGISASGEGEMMGRKALDYEELNENVKKVQYAVRGEL 159 L GGA G+ G+ + R LD E++ +N KK++ A+ L Sbjct: 65 LVGGATGMIGDPSGKSVERSLLDQEQVLDNSKKIEVALANYL 106
>WC2_NEUCR (P78714) White collar 2 protein (WC2)| Length = 530 Score = 31.2 bits (69), Expect = 0.62 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 4/75 (5%) Frame = +1 Query: 109 ELNENVKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALGQKPLTFPRQVVALCQAP 288 ELNE + A +L L +K+G IF VG+ H K P+ CQA Sbjct: 224 ELNEAI-----ATGSQLRLFYRFRKKDGNWTIFETVGHAHIAAAKFAPNPQNQSPFCQAV 278 Query: 289 FLLDDP----NVGLI 321 F++ P N GL+ Sbjct: 279 FMMARPYPTKNAGLL 293
>RPOC_AQUAE (O67763) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1574 Score = 30.8 bits (68), Expect = 0.81 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -2 Query: 309 VGIIEEEGSLAERHHLAWEGEWLLSEGVRV 220 +GI++EEG L ERH + + L+ EG V Sbjct: 1096 IGIVDEEGRLLERHTIPYGARILVEEGQEV 1125
>SYY_MYCGA (Q7NBH9) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 420 Score = 30.8 bits (68), Expect = 0.81 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = +1 Query: 34 LCGGAPGISASGEGEMMGRKALDYEELNENVKKVQYAVRGELYLRA 171 + GGA G+ G+ RK DYE++ N K++ V+ E Y +A Sbjct: 72 ILGGATGLIGDPSGKTSERKVQDYEKITANANKIK--VQLERYTQA 115
>KLK1_MACFA (Q07276) Kallikrein-1 precursor (EC 3.4.21.35) (Tissue kallikrein)| (Kidney/pancreas/salivary gland kallikrein) Length = 257 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = -3 Query: 353 CLALAMASAGKMRPTLGSSRRKGAWQSATTWRGKVSGFCPRACG 222 CLAL++ G+ P SR G W+ + W+ + F CG Sbjct: 7 CLALSLGGTGRAPPI--QSRIVGGWECSQPWQAALYHFSTFQCG 48
>RPOC_AQUPY (Q9X6Y2) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1576 Score = 29.6 bits (65), Expect = 1.8 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = -2 Query: 309 VGIIEEEGSLAERHHLAWEGEWLLSEGVRV 220 +G+++E+G L ERH + + L+ EG +V Sbjct: 1096 IGVLDEKGRLLERHTIPYGARLLVDEGQKV 1125
>RSE1_YARLI (Q6CAH5) Pre-mRNA-splicing factor RSE1| Length = 1143 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Frame = +1 Query: 190 GKRIIF--TNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLIFPADAIARAKHYLS 363 GK+++F ++G H + + P+ P + P D P L+F +AI H+++ Sbjct: 212 GKQLVFYELDLGLNHVIRKAPVDIPNSTSHVTAVPGGTDGPGGVLVFSTNAIV---HHVA 268 Query: 364 LAPGG 378 A GG Sbjct: 269 GAAGG 273
>SPAG1_RAT (Q5U2X2) Sperm-associated antigen 1 (Infertility-related sperm| protein Spag-1) (HSD-3.8) Length = 893 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = +1 Query: 88 RKALDYEELNENVKKVQYAVRGELYLR--ASELQKEGKRIIFTNVGNPHALGQK 243 RK L E N+ KK V EL ASELQ +GKR++ V N G K Sbjct: 304 RKVLQAEPDNDLAKKTLSEVERELKNSEPASELQTKGKRMVIEEVENSGDEGGK 357
>EPHA7_HUMAN (Q15375) Ephrin type-A receptor 7 precursor (EC 2.7.10.1)| (Tyrosine-protein kinase receptor EHK-3) (EPH homology kinase 3) (Receptor protein-tyrosine kinase HEK11) Length = 998 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = -2 Query: 315 TDVGIIEEEGSLAERHHLAWEGEWLLSEGVRVADVG 208 T V EEE A R H + EGEWL+ G + G Sbjct: 233 TCVSSAEEEAENAPRMHCSAEGEWLVPIGKCICKAG 268
>PROB_METMA (Q8PYP3) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)| (GK) Length = 385 Score = 28.9 bits (63), Expect = 3.1 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 7/79 (8%) Frame = +1 Query: 88 RKALDYEELNENVKKVQYAVRGELYLRASELQKEGKRIIFTNVG------NPHALGQKPL 249 RK D+ N N+ A + + SEL+K+GK +I + G N + KP Sbjct: 25 RKGCDHTRENCNIDP---AFMESIAFQVSELRKQGKEVIIVSSGAIGVGLNELGIAPKPR 81 Query: 250 TFP-RQVVALCQAPFLLDD 303 P RQ A L+ D Sbjct: 82 EIPIRQAAAAVGQSMLMQD 100
>KLK1_PAPHA (Q28773) Kallikrein-1 precursor (EC 3.4.21.35) (Tissue kallikrein)| (Kidney/pancreas/salivary gland kallikrein) Length = 258 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = -3 Query: 353 CLALAMASAGKMRPTLGSSRRKGAWQSATTWRGKVSGFCPRACG 222 CLAL++ G P SR G W+ + W+ + F CG Sbjct: 7 CLALSLGGTGAAPPI--QSRIVGGWECSQPWQAALYHFSTFQCG 48
>EPN3_HUMAN (Q9H201) Epsin-3 (EPS-15-interacting protein 3)| Length = 632 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 Query: 87 PHHLAFSGGRDPWRAAAEQSRXQGETS 7 PHH S G DPW A+ E S G S Sbjct: 394 PHHKLPSTGADPWGASLETSDTPGGAS 420
>HBA_CRIGA (P19014) Hemoglobin alpha subunit (Hemoglobin alpha chain)| (Alpha-globin) Length = 141 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +1 Query: 328 ADAIARAKHYLSLAPGGLGAYSD 396 ADA+A A H+L PG L A SD Sbjct: 63 ADALANAAHHLDDLPGALSALSD 85
>YOR4_PRRSL (Q04568) Hypothetical 19.9 kDa protein (ORF4)| Length = 183 Score = 28.1 bits (61), Expect = 5.3 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 14/86 (16%) Frame = +1 Query: 1 SARGFPLXSALLCGGAPGISASGEGEMMGRKAL--------DYEELNENVKKVQYAVRGE 156 +A GF + + C G+SA+ E G+ + Y + NV Y + Sbjct: 40 AAAGFMVLQDINCFRPHGVSAAQEKISFGKSSQCREAVGTPQYITITANVTDESYLYNAD 99 Query: 157 LYLR------ASELQKEGKRIIFTNV 216 L + ASE+ ++G ++IF NV Sbjct: 100 LLMLSACLFYASEMSEKGFKVIFGNV 125
>FEOB_SHIFL (Q83PW3) Ferrous iron transport protein B| Length = 773 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +1 Query: 19 LXSALLCGGAPGISASGEGEMMGRKALDYEELNENVKKVQYA 144 L + L C P +S G G + A+D + NENV+ V YA Sbjct: 137 LSARLGCPVIPLVSTRGRGIEALKLAIDRYKANENVELVHYA 178
>FEOB_ECOLI (P33650) Ferrous iron transport protein B| Length = 773 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +1 Query: 19 LXSALLCGGAPGISASGEGEMMGRKALDYEELNENVKKVQYA 144 L + L C P +S G G + A+D + NENV+ V YA Sbjct: 137 LSARLGCPVIPLVSTRGRGIEALKLAIDRYKANENVELVHYA 178
>FEOB_ECOL6 (Q8FCT7) Ferrous iron transport protein B| Length = 773 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +1 Query: 19 LXSALLCGGAPGISASGEGEMMGRKALDYEELNENVKKVQYA 144 L + L C P +S G G + A+D + NENV+ V YA Sbjct: 137 LSARLGCPVIPLVSTRGRGIEALKLAIDRYKANENVELVHYA 178
>FEOB_ECO57 (Q8XED4) Ferrous iron transport protein B| Length = 773 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +1 Query: 19 LXSALLCGGAPGISASGEGEMMGRKALDYEELNENVKKVQYA 144 L + L C P +S G G + A+D + NENV+ V YA Sbjct: 137 LSARLGCPVIPLVSTRGRGIEALKLAIDRYKANENVELVHYA 178
>UVRB_THEMA (Q9X282) UvrABC system protein B (Protein uvrB) (Excinuclease ABC| subunit B) Length = 664 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +1 Query: 94 ALDYEELNENVKKVQYAVRGELYLRASELQKEGK 195 A+++ E +K+ ++R EL R SEL+K+GK Sbjct: 242 AVEFITTEEKLKRAVESIREELNERLSELKKQGK 275
>SYY_CHLTR (O84065) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 412 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/49 (28%), Positives = 24/49 (48%) Frame = +1 Query: 13 FPLXSALLCGGAPGISASGEGEMMGRKALDYEELNENVKKVQYAVRGEL 159 + + L GGA G+ G+ + R LD ++ +N KK+ A+ L Sbjct: 58 YGITPVALVGGATGMIGDPSGKSVERSLLDQAQVLDNSKKIAAALASYL 106
>SYY_CHLTA (Q3KMV9) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 412 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/49 (28%), Positives = 24/49 (48%) Frame = +1 Query: 13 FPLXSALLCGGAPGISASGEGEMMGRKALDYEELNENVKKVQYAVRGEL 159 + + L GGA G+ G+ + R LD ++ +N KK+ A+ L Sbjct: 58 YGITPVALVGGATGMIGDPSGKSVERSLLDQAQVLDNSKKIAAALASYL 106
>MGLA_SHIFL (P0AAG9) Galactoside transport ATP-binding protein mglA| Length = 506 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = +1 Query: 79 MMGRKALDYEE---LNENVKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALG 237 ++GR L E L+E + + + E+Y +EL K+GK II + P LG Sbjct: 416 IIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKGKGIIIISSEMPELLG 471
>MGLA_SALTY (P23924) Galactoside transport ATP-binding protein mglA| Length = 506 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = +1 Query: 79 MMGRKALDYEE---LNENVKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALG 237 ++GR L E L+E + + + E+Y +EL K+GK II + P LG Sbjct: 416 IIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKGKGIIIISSEMPELLG 471
>MGLA_ECOLI (P0AAG8) Galactoside transport ATP-binding protein mglA| Length = 506 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = +1 Query: 79 MMGRKALDYEE---LNENVKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALG 237 ++GR L E L+E + + + E+Y +EL K+GK II + P LG Sbjct: 416 IIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKGKGIIIISSEMPELLG 471
>IRS2_MOUSE (P81122) Insulin receptor substrate 2 (IRS-2) (4PS)| Length = 1321 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +1 Query: 301 DPNVGLIFPADAIARAKHYLSLAPGGLG 384 D N GL+ PA A+ R ++L P GLG Sbjct: 178 DDNYGLVTPATAVYREVWQVNLKPKGLG 205
>DNL1_XENLA (P51892) DNA ligase 1 (EC 6.5.1.1) (DNA ligase I)| (Polydeoxyribonucleotide synthase [ATP] 1) Length = 1070 Score = 28.1 bits (61), Expect = 5.3 Identities = 28/116 (24%), Positives = 45/116 (38%), Gaps = 10/116 (8%) Frame = +1 Query: 34 LCGGAPGISASG------EGEMMGRKALDYEELNENVKKVQYAVRGELYLRASE----LQ 183 LC +PGIS SG + + ++ L+ N K + V+G + + E +Q Sbjct: 171 LCSDSPGISPSGIPKRKTARKQLPKRKLEISPSESNPPKDDFDVKGAVKRQKKEAEGDIQ 230 Query: 184 KEGKRIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLIFPADAIARAK 351 +E N+ K T P V DDPN+ L+ D ++ K Sbjct: 231 QEEPMETSHNISMEEECPIKKETNPDVVQETISN---ADDPNIELVDQKDVVSGEK 283
>EPHA7_RAT (P54759) Ephrin type-A receptor 7 precursor (EC 2.7.10.1)| (Tyrosine-protein kinase receptor EHK-3) (EPH homology kinase 3) Length = 998 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = -2 Query: 315 TDVGIIEEEGSLAERHHLAWEGEWLLSEGVRVADVG 208 T V EEE + R H + EGEWL+ G + G Sbjct: 233 TCVSSAEEEAENSPRMHCSAEGEWLVPIGKCICKAG 268
>EPHA7_MOUSE (Q61772) Ephrin type-A receptor 7 precursor (EC 2.7.10.1)| (Tyrosine-protein kinase receptor EHK-3) (EPH homology kinase 3) (Embryonic brain kinase) (EBK) (Developmental kinase 1) (MDK-1) Length = 998 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = -2 Query: 315 TDVGIIEEEGSLAERHHLAWEGEWLLSEGVRVADVG 208 T V EEE + R H + EGEWL+ G + G Sbjct: 233 TCVSSAEEEAENSPRMHCSAEGEWLVPIGKCICKAG 268
>Y1479_METJA (Q58874) Putative aminotransferase MJ1479 (EC 2.6.1.-)| Length = 432 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/54 (25%), Positives = 32/54 (59%) Frame = +1 Query: 112 LNENVKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALGQKPLTFPRQVVA 273 ++ K++ Y +R E+ A ++++ G I + N+G+P A G+K + + ++A Sbjct: 6 IDVGAKELSYEIR-EIVDVAKKIEEFGINITWENIGDPVAKGEKIPDWIKDIIA 58
>SYFB_LACSS (Q38VV4) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 806 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Frame = -2 Query: 279 AERHHLAWEGEWLLSEGVRVAD--VGEDDPLALLLELGCAEV 160 A+RH+L + +GV VAD V D A++ ELG +V Sbjct: 357 AQRHNLRSDASSRFEKGVNVADVQVALDAAAAMMAELGAGQV 398
>SYL_NOCFA (Q5YN65) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 950 Score = 27.7 bits (60), Expect = 6.9 Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 14/134 (10%) Frame = +1 Query: 1 SARGFPLXSALLCGGAPGISASGEGEMMGR---KALDYEELNENV-----------KKVQ 138 +A G P+ + G + +GEGE++ L EE V +Q Sbjct: 436 TAFGLPIVEVISGGDITAAAHTGEGELVNSDYLNGLSVEEAKATVIGRLEADGHGTGTIQ 495 Query: 139 YAVRGELYLRASELQKEGKRIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGL 318 Y +R L+ R E I++ G PHAL + L P ++ L + DP+ Sbjct: 496 YKLRDWLFAR-QRYWGEPFPIVYDEDGAPHALPESML--PVRLPELDDFAPVTFDPDDAD 552 Query: 319 IFPADAIARAKHYL 360 P+ +A+A ++ Sbjct: 553 SEPSPPLAKATDWV 566
>FEOB_SALTY (P74884) Ferrous iron transport protein B| Length = 772 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +1 Query: 19 LXSALLCGGAPGISASGEGEMMGRKALDYEELNENVKKVQYA 144 L + L C P +S G G + A+D N+NV+ V YA Sbjct: 137 LSTRLGCPVVPLVSTRGRGIEALKLAIDRHNANDNVELVHYA 178
>FEOB_SALTI (Q83ST5) Ferrous iron transport protein B| Length = 772 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +1 Query: 19 LXSALLCGGAPGISASGEGEMMGRKALDYEELNENVKKVQYA 144 L + L C P +S G G + A+D N+NV+ V YA Sbjct: 137 LSTRLGCPVVPLVSTRGRGIEALKLAIDRHNANDNVELVHYA 178
>FEOB_SALPA (Q5PLZ1) Ferrous iron transport protein B| Length = 772 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +1 Query: 19 LXSALLCGGAPGISASGEGEMMGRKALDYEELNENVKKVQYA 144 L + L C P +S G G + A+D N+NV+ V YA Sbjct: 137 LSTRLGCPVVPLVSTRGRGIEALKLAIDRHNANDNVELVHYA 178
>FEOB_SALCH (Q57IW8) Ferrous iron transport protein B| Length = 772 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +1 Query: 19 LXSALLCGGAPGISASGEGEMMGRKALDYEELNENVKKVQYA 144 L + L C P +S G G + A+D N+NV+ V YA Sbjct: 137 LSTRLGCPVVPLVSTRGRGIEALKLAIDRHNANDNVELVHYA 178
>RBSA_HAEIN (P44735) Ribose transport ATP-binding protein rbsA (EC 3.6.3.17)| Length = 493 Score = 27.3 bits (59), Expect = 9.0 Identities = 21/69 (30%), Positives = 29/69 (42%) Frame = +1 Query: 31 LLCGGAPGISASGEGEMMGRKALDYEELNENVKKVQYAVRGELYLRASELQKEGKRIIFT 210 LL GG A G M L L+E + V + E+Y +E +KEG I+ Sbjct: 394 LLSGGNQQKVAIARGLMTRPNVLI---LDEPTRGVDVGAKKEIYQLINEFKKEGLSILMI 450 Query: 211 NVGNPHALG 237 + P LG Sbjct: 451 SSDMPEVLG 459
>INSM1_MOUSE (Q63ZV0) Insulinoma-associated protein 1 (Zinc finger protein IA-1)| Length = 521 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +1 Query: 1 SARGFPLXSALLCGGAPGISASGEG 75 SA FP +ALL GG G + +G G Sbjct: 129 SAESFPTPAALLAGGGSGANGAGGG 153 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,527,528 Number of Sequences: 219361 Number of extensions: 809262 Number of successful extensions: 3176 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 3084 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3165 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
