>INDY2_DROME (Q9VDQ0) Protein I'm not dead yet 2|
          Length = 562

 Score = 26.6 bits (57), Expect(2) = 0.93
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 189 ILRYAHVLIVKQSYFTCHGLLPILFG 112
           + +YAH+   K  YF C G++P + G
Sbjct: 505 VTQYAHI---KTKYFACCGIVPTIIG 527



 Score = 24.3 bits (51), Expect(2) = 0.93
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 70  PHAAVFPSWAKRIRNSLR 17
           P +  FP WAK I+N  +
Sbjct: 544 PESKSFPDWAKEIKNQTK 561

>FUR2_DROME (P30432) Furin-like protease 2 precursor (EC 3.4.21.75) (Furin-2)|
          Length = 1679

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = -2

Query: 508  RGPSLQFRC*ARRLQPLCY-RPPPTSS*NHVGLPWSCSPLC 389
            RGP+    C   RL   C  R PP S  N VG+ W C   C
Sbjct: 979  RGPTQCVACSHYRLDNTCVSRCPPRSFPNQVGICWPCHDTC 1019

>YQJI_SHIFL (P64589) Hypothetical protein yqjI|
          Length = 207

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +3

Query: 177 HTEGCC*SWCPPRHVGCC 230
           H EGCC     PRH GCC
Sbjct: 4   HHEGCCKHEGQPRHEGCC 21

>YQJI_ECOLI (P64588) Hypothetical protein yqjI|
          Length = 207

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = +3

Query: 177 HTEGCC*SWCPPRHVGCC 230
           H EGCC     PRH GCC
Sbjct: 4   HHEGCCKHEGQPRHEGCC 21

>PHZG_PSEFL (Q51793) Phenazine biosynthesis protein phzG|
          Length = 222

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = -2

Query: 154 ELLHMPWVAAHLVW--AIEQV*YANSRSTIPHAAVFPSWAKR 35
           ELLH PW +  L W    +Q+        +P+A    +W KR
Sbjct: 98  ELLHNPWASGVLYWRETSQQIILNGQAVRLPNAKADDAWLKR 139

>UQCR1_EUGGR (P43264) Ubiquinol-cytochrome-c reductase complex core protein I,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 494

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 7/39 (17%)
 Frame = +2

Query: 47  RRKNRGVWNCTSRVGVLDLFN-------RPNKMGSNPWH 142
           R K    ++C +R  V+D ++       RPNK G NP H
Sbjct: 292 RDKGEAAYSCFARAIVMDFYDPKVGQFFRPNKAGHNPIH 330

>SKP2_HUMAN (Q13309) S-phase kinase-associated protein 2 (F-box protein Skp2)|
           (Cyclin A/CDK2-associated protein p45) (p45skp2)
           (F-box/LRR-repeat protein 1)
          Length = 424

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
 Frame = +1

Query: 112 PKQDGQQPMACEVTLFHYEDMGIPKDVAKVGVRHGMWGAVKKLQS-GFRAYQLMRKSEHI 288
           P+    QP+A   + F  + M +   V +V   HG+     KLQ+      +L     + 
Sbjct: 166 PRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNT 225

Query: 289 LSHSAIMARVTTKTCIAGSDGSLDQWPSS 375
           L+ ++ + R+    C   S+ +L    SS
Sbjct: 226 LAKNSNLVRLNLSGCSGFSEFALQTLLSS 254


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,258,693
Number of Sequences: 219361
Number of extensions: 2040348
Number of successful extensions: 5663
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5661
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4085413911
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)