| Clone Name | basd21m10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_476904.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1565 Score = 248 bits (125), Expect = 2e-62 Identities = 290/343 (84%), Gaps = 4/343 (1%) Strand = Plus / Plus Query: 3 cttactattgtgttacgaagggagttccttatcct-ctttgcccaagaaggaaaaaccgc 61 |||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| Sbjct: 655 cttactattgtgttacaaagggagttccttatccagctttgcctaagaaggaaaaaccaa 714 Query: 62 ggcgtgtggaattgtacttctcgagttggcgtattagacctgttcaatcgcccaaacaag 121 ||||||||||| |||| ||||| ||||||||||||||| | |||||||| || ||||||| Sbjct: 715 ggcgtgtggaactgtatttctcaagttggcgtattagagcagttcaatcaccgaaacaag 774 Query: 122 atgggcagcaacccatggcatgtgaagtaactctgtttcactatgaggacatgggcatac 181 |||| |||||| || |||||||||||||| ||| | ||||| |||||||||||||| | Sbjct: 775 atggacagcaatcc---gcatgtgaagtaacgctggtccactacgaggacatgggcatcc 831 Query: 182 cgaaggatgttgctaaagttggtgtccgccacggcatgtggggtgctgttaaaaagctgc 241 | || ||||| || || || |||||||| || ||||||||||||||||| || ||| | | Sbjct: 832 ctaaagatgtcgccaaggtgggtgtccggcatggcatgtggggtgctgtaaagaagttcc 891 Query: 242 agtccggctttagagcatatcagctaatgagaaaatcagaacacatactgtcacacagtg 301 ||||||| ||||||||||| |||| ||||||| | |||| ||| || || | ||||| Sbjct: 892 agtccggatttagagcataccagcaaatgagagacacagagaacaccctctctcgcagtg 951 Query: 302 ccatcatggctcgggtgaccaccaagacatgcattgctggttc 344 ||||||||||||| || ||||||||||||| |||||| |||| Sbjct: 952 ccatcatggctcgagtaaccaccaagacatctattgctagttc 994 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 431 actggaagtgggtggtggtcggtagcacagtggctgcagtctgcgtgcttaacaccggaa 490 ||||||| ||||||||| ||||| || |||||||||| ||||||||||| ||||| || Sbjct: 1081 actggaaatgggtggtgttcggtggcgcagtggctgccgtctgcgtgctcaacactgggc 1140 Query: 491 ttgtagggaaggc 503 |||| |||||||| Sbjct: 1141 ttgttgggaaggc 1153
>dbj|AK066157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059B01, full insert sequence Length = 1650 Score = 248 bits (125), Expect = 2e-62 Identities = 290/343 (84%), Gaps = 4/343 (1%) Strand = Plus / Plus Query: 3 cttactattgtgttacgaagggagttccttatcct-ctttgcccaagaaggaaaaaccgc 61 |||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| Sbjct: 740 cttactattgtgttacaaagggagttccttatccagctttgcctaagaaggaaaaaccaa 799 Query: 62 ggcgtgtggaattgtacttctcgagttggcgtattagacctgttcaatcgcccaaacaag 121 ||||||||||| |||| ||||| ||||||||||||||| | |||||||| || ||||||| Sbjct: 800 ggcgtgtggaactgtatttctcaagttggcgtattagagcagttcaatcaccgaaacaag 859 Query: 122 atgggcagcaacccatggcatgtgaagtaactctgtttcactatgaggacatgggcatac 181 |||| |||||| || |||||||||||||| ||| | ||||| |||||||||||||| | Sbjct: 860 atggacagcaatcc---gcatgtgaagtaacgctggtccactacgaggacatgggcatcc 916 Query: 182 cgaaggatgttgctaaagttggtgtccgccacggcatgtggggtgctgttaaaaagctgc 241 | || ||||| || || || |||||||| || ||||||||||||||||| || ||| | | Sbjct: 917 ctaaagatgtcgccaaggtgggtgtccggcatggcatgtggggtgctgtaaagaagttcc 976 Query: 242 agtccggctttagagcatatcagctaatgagaaaatcagaacacatactgtcacacagtg 301 ||||||| ||||||||||| |||| ||||||| | |||| ||| || || | ||||| Sbjct: 977 agtccggatttagagcataccagcaaatgagagacacagagaacaccctctctcgcagtg 1036 Query: 302 ccatcatggctcgggtgaccaccaagacatgcattgctggttc 344 ||||||||||||| || ||||||||||||| |||||| |||| Sbjct: 1037 ccatcatggctcgagtaaccaccaagacatctattgctagttc 1079 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 431 actggaagtgggtggtggtcggtagcacagtggctgcagtctgcgtgcttaacaccggaa 490 ||||||| ||||||||| ||||| || |||||||||| ||||||||||| ||||| || Sbjct: 1166 actggaaatgggtggtgttcggtggcgcagtggctgccgtctgcgtgctcaacactgggc 1225 Query: 491 ttgtagggaaggc 503 |||| |||||||| Sbjct: 1226 ttgttgggaaggc 1238
>gb|BT024104.1| Zea mays clone EL01N0520G08 mRNA sequence Length = 1769 Score = 202 bits (102), Expect = 8e-49 Identities = 270/324 (83%), Gaps = 4/324 (1%) Strand = Plus / Plus Query: 3 cttactattgtgttacgaagggagttccttatcc-tctttgcccaagaaggaaaaaccgc 61 |||||||||||||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct: 905 cttactattgtgttacaaagggtgttccatatccatcattgcccaagaaagaaaaaccaa 964 Query: 62 ggcgtgtggaattgtacttctcgagttggcgtattagacctgttcaatcgcccaaacaag 121 |||||||||| ||||||||||| ||||||||||||||| ||||||||||||| ||||| | Sbjct: 965 ggcgtgtggagttgtacttctcaagttggcgtattagagctgttcaatcgcctaaacatg 1024 Query: 122 atgggcagcaacccatggcatgtgaagtaactctgtttcactatgaggacatgggcatac 181 || |||||| | || || ||||||||| || |||||||||||||||||||||||| Sbjct: 1025 tgggtcagcaatc---tgcgtgcgaagtaactttggttcactatgaggacatgggcatac 1081 Query: 182 cgaaggatgttgctaaagttggtgtccgccacggcatgtggggtgctgttaaaaagctgc 241 | || ||||| || | |||| ||| ||||||||||||||||||||||| || || || | Sbjct: 1082 caaaagatgtagccagggttgctgttcgccacggcatgtggggtgctgtgaagaaacttc 1141 Query: 242 agtccggctttagagcatatcagctaatgagaaaatcagaacacatactgtcacacagtg 301 |||| || || ||||| || |||| ||||||| | ||||| | | ||||||||||| | Sbjct: 1142 agtctgggttcagagcgtaccagcaaatgagagacacagaaaataccctgtcacacagcg 1201 Query: 302 ccatcatggctcgggtgaccacca 325 |||| |||||||| ||||||||| Sbjct: 1202 ccattatggctcgaatgaccacca 1225
>gb|AY105898.1| Zea mays PCO133189 mRNA sequence Length = 681 Score = 194 bits (98), Expect = 2e-46 Identities = 269/324 (83%), Gaps = 4/324 (1%) Strand = Plus / Plus Query: 3 cttactattgtgttacgaagggagttccttatcc-tctttgcccaagaaggaaaaaccgc 61 |||||||||||||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct: 351 cttactattgtgttacaaagggtgttccatatccatcattgcccaagaaagaaaaaccaa 410 Query: 62 ggcgtgtggaattgtacttctcgagttggcgtattagacctgttcaatcgcccaaacaag 121 |||||||||| ||||||||||| ||||||||||||||| ||||||||||||| ||||| | Sbjct: 411 ggcgtgtggagttgtacttctcaagttggcgtattagagctgttcaatcgcctaaacatg 470 Query: 122 atgggcagcaacccatggcatgtgaagtaactctgtttcactatgaggacatgggcatac 181 || |||||| | || || ||||||||| || |||||||||||||||||||||||| Sbjct: 471 tgggtcagcaatc---tgcgtgcgaagtaactttggttcactatgaggacatgggcatac 527 Query: 182 cgaaggatgttgctaaagttggtgtccgccacggcatgtggggtgctgttaaaaagctgc 241 | || ||||| || | |||| | | ||||||||||||||||||||||| || || || | Sbjct: 528 caaaagatgtagccagggttgctattcgccacggcatgtggggtgctgtgaagaaacttc 587 Query: 242 agtccggctttagagcatatcagctaatgagaaaatcagaacacatactgtcacacagtg 301 |||| || || ||||| || |||| ||||||| | ||||| | | ||||||||||| | Sbjct: 588 agtctgggttcagagcgtaccagcaaatgagagacacagaaaataccctgtcacacagcg 647 Query: 302 ccatcatggctcgggtgaccacca 325 |||| |||||||| ||||||||| Sbjct: 648 ccattatggctcgaatgaccacca 671
>dbj|AK060743.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-E03, full insert sequence Length = 1838 Score = 188 bits (95), Expect = 1e-44 Identities = 197/229 (86%), Gaps = 4/229 (1%) Strand = Plus / Plus Query: 3 cttactattgtgttacgaagggagttccttatcct-ctttgcccaagaaggaaaaaccgc 61 |||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1234 cttactattgtgttacaaagggagttccttatccagctttgcctaagaaggaaaaaccaa 1293 Query: 62 ggcgtgtggaattgtacttctcgagttggcgtattagacctgttcaatcgcccaaacaag 121 ||||||||||| |||| ||||| ||||||||||||||| | |||||||| || ||||||| Sbjct: 1294 ggcgtgtggaactgtatttctcaagttggcgtattagagcagttcaatcaccgaaacaag 1353 Query: 122 atgggcagcaacccatggcatgtgaagtaactctgtttcactatgaggacatgggcatac 181 |||| |||||| || |||||||| ||||| ||| | ||||| |||||||||||||| | Sbjct: 1354 atggacagcaatcc---gcatgtgaggtaacgctggtccactacgaggacatgggcatcc 1410 Query: 182 cgaaggatgttgctaaagttggtgtccgccacggcatgtggggtgctgt 230 | || ||||| || || || |||||||| || ||||||||||||||||| Sbjct: 1411 ctaaagatgtcgccaaggtgggtgtccggcatggcatgtggggtgctgt 1459
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 143 bits (72), Expect = 7e-31 Identities = 200/242 (82%), Gaps = 3/242 (1%) Strand = Plus / Minus Query: 103 gttcaatcgcccaaacaagatgggcagcaacccatggcatgtgaagtaactctgtttcac 162 |||||||| || ||||||||||| |||||| || |||||||||||||| ||| | ||| Sbjct: 4536332 gttcaatcaccgaaacaagatggacagcaatcc---gcatgtgaagtaacgctggtccac 4536276 Query: 163 tatgaggacatgggcataccgaaggatgttgctaaagttggtgtccgccacggcatgtgg 222 || |||||||||||||| || || ||||| || || || |||||||| || ||||||||| Sbjct: 4536275 tacgaggacatgggcatccctaaagatgtcgccaaggtgggtgtccggcatggcatgtgg 4536216 Query: 223 ggtgctgttaaaaagctgcagtccggctttagagcatatcagctaatgagaaaatcagaa 282 |||||||| || ||| | |||||||| ||||||||||| |||| ||||||| | |||| Sbjct: 4536215 ggtgctgtaaagaagttccagtccggatttagagcataccagcaaatgagagacacagag 4536156 Query: 283 cacatactgtcacacagtgccatcatggctcgggtgaccaccaagacatgcattgctggt 342 ||| || || | |||||||||||||||||| || ||||||||||||| |||||| || Sbjct: 4536155 aacaccctctctcgcagtgccatcatggctcgagtaaccaccaagacatctattgctagt 4536096 Query: 343 tc 344 || Sbjct: 4536095 tc 4536094 Score = 87.7 bits (44), Expect = 3e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 21 agggagttccttatcct-ctttgcccaagaaggaaaaaccgcggcgtgtggaattgtact 79 |||||||||||||||| ||||||| |||||||||||||| ||||||||||| |||| | Sbjct: 4536545 agggagttccttatccagctttgcctaagaaggaaaaaccaaggcgtgtggaactgtatt 4536486 Query: 80 tctcgagttggcgtattaga 99 |||| ||||||||||||||| Sbjct: 4536485 tctcaagttggcgtattaga 4536466 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 431 actggaagtgggtggtggtcggtagcacagtggctgcagtctgcgtgcttaacaccggaa 490 ||||||| ||||||||| ||||| || |||||||||| ||||||||||| ||||| || Sbjct: 4536007 actggaaatgggtggtgttcggtggcgcagtggctgccgtctgcgtgctcaacactgggc 4535948 Query: 491 ttgtagggaaggc 503 |||| |||||||| Sbjct: 4535947 ttgttgggaaggc 4535935
>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1046_F10 Length = 118472 Score = 143 bits (72), Expect = 7e-31 Identities = 200/242 (82%), Gaps = 3/242 (1%) Strand = Plus / Minus Query: 103 gttcaatcgcccaaacaagatgggcagcaacccatggcatgtgaagtaactctgtttcac 162 |||||||| || ||||||||||| |||||| || |||||||||||||| ||| | ||| Sbjct: 115051 gttcaatcaccgaaacaagatggacagcaatcc---gcatgtgaagtaacgctggtccac 114995 Query: 163 tatgaggacatgggcataccgaaggatgttgctaaagttggtgtccgccacggcatgtgg 222 || |||||||||||||| || || ||||| || || || |||||||| || ||||||||| Sbjct: 114994 tacgaggacatgggcatccctaaagatgtcgccaaggtgggtgtccggcatggcatgtgg 114935 Query: 223 ggtgctgttaaaaagctgcagtccggctttagagcatatcagctaatgagaaaatcagaa 282 |||||||| || ||| | |||||||| ||||||||||| |||| ||||||| | |||| Sbjct: 114934 ggtgctgtaaagaagttccagtccggatttagagcataccagcaaatgagagacacagag 114875 Query: 283 cacatactgtcacacagtgccatcatggctcgggtgaccaccaagacatgcattgctggt 342 ||| || || | |||||||||||||||||| || ||||||||||||| |||||| || Sbjct: 114874 aacaccctctctcgcagtgccatcatggctcgagtaaccaccaagacatctattgctagt 114815 Query: 343 tc 344 || Sbjct: 114814 tc 114813 Score = 87.7 bits (44), Expect = 3e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 21 agggagttccttatcct-ctttgcccaagaaggaaaaaccgcggcgtgtggaattgtact 79 |||||||||||||||| ||||||| |||||||||||||| ||||||||||| |||| | Sbjct: 115264 agggagttccttatccagctttgcctaagaaggaaaaaccaaggcgtgtggaactgtatt 115205 Query: 80 tctcgagttggcgtattaga 99 |||| ||||||||||||||| Sbjct: 115204 tctcaagttggcgtattaga 115185 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 431 actggaagtgggtggtggtcggtagcacagtggctgcagtctgcgtgcttaacaccggaa 490 ||||||| ||||||||| ||||| || |||||||||| ||||||||||| ||||| || Sbjct: 114726 actggaaatgggtggtgttcggtggcgcagtggctgccgtctgcgtgctcaacactgggc 114667 Query: 491 ttgtagggaaggc 503 |||| |||||||| Sbjct: 114666 ttgttgggaaggc 114654
>dbj|AP003753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_B08 Length = 119212 Score = 143 bits (72), Expect = 7e-31 Identities = 200/242 (82%), Gaps = 3/242 (1%) Strand = Plus / Minus Query: 103 gttcaatcgcccaaacaagatgggcagcaacccatggcatgtgaagtaactctgtttcac 162 |||||||| || ||||||||||| |||||| || |||||||||||||| ||| | ||| Sbjct: 1672 gttcaatcaccgaaacaagatggacagcaatcc---gcatgtgaagtaacgctggtccac 1616 Query: 163 tatgaggacatgggcataccgaaggatgttgctaaagttggtgtccgccacggcatgtgg 222 || |||||||||||||| || || ||||| || || || |||||||| || ||||||||| Sbjct: 1615 tacgaggacatgggcatccctaaagatgtcgccaaggtgggtgtccggcatggcatgtgg 1556 Query: 223 ggtgctgttaaaaagctgcagtccggctttagagcatatcagctaatgagaaaatcagaa 282 |||||||| || ||| | |||||||| ||||||||||| |||| ||||||| | |||| Sbjct: 1555 ggtgctgtaaagaagttccagtccggatttagagcataccagcaaatgagagacacagag 1496 Query: 283 cacatactgtcacacagtgccatcatggctcgggtgaccaccaagacatgcattgctggt 342 ||| || || | |||||||||||||||||| || ||||||||||||| |||||| || Sbjct: 1495 aacaccctctctcgcagtgccatcatggctcgagtaaccaccaagacatctattgctagt 1436 Query: 343 tc 344 || Sbjct: 1435 tc 1434 Score = 87.7 bits (44), Expect = 3e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 21 agggagttccttatcct-ctttgcccaagaaggaaaaaccgcggcgtgtggaattgtact 79 |||||||||||||||| ||||||| |||||||||||||| ||||||||||| |||| | Sbjct: 1885 agggagttccttatccagctttgcctaagaaggaaaaaccaaggcgtgtggaactgtatt 1826 Query: 80 tctcgagttggcgtattaga 99 |||| ||||||||||||||| Sbjct: 1825 tctcaagttggcgtattaga 1806 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 431 actggaagtgggtggtggtcggtagcacagtggctgcagtctgcgtgcttaacaccggaa 490 ||||||| ||||||||| ||||| || |||||||||| ||||||||||| ||||| || Sbjct: 1347 actggaaatgggtggtgttcggtggcgcagtggctgccgtctgcgtgctcaacactgggc 1288 Query: 491 ttgtagggaaggc 503 |||| |||||||| Sbjct: 1287 ttgttgggaaggc 1275
>ref|NM_117530.2| Arabidopsis thaliana unknown protein AT4G14500 mRNA, complete cds Length = 1768 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 8 tattgtgttacgaagggagttccttatcc 36 |||||||| || ||||||||||||||||| Sbjct: 999 tattgtgtcacaaagggagttccttatcc 1027
>gb|AY377856.1| Brassica napus TOC33 (Toc33) gene, complete cds; nuclear gene for chloroplast product Length = 1376 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 342 ttctgatggctccttggatca 362 ||||||||||||||||||||| Sbjct: 1344 ttctgatggctccttggatca 1324
>gb|BT008748.1| Arabidopsis thaliana At4g14500 mRNA, complete cds Length = 1302 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 8 tattgtgttacgaagggagttccttatcc 36 |||||||| || ||||||||||||||||| Sbjct: 784 tattgtgtcacaaagggagttccttatcc 812
>gb|AY136359.1| Arabidopsis thaliana expressed protein (At4g14500) mRNA, complete cds Length = 1770 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 8 tattgtgttacgaagggagttccttatcc 36 |||||||| || ||||||||||||||||| Sbjct: 999 tattgtgtcacaaagggagttccttatcc 1027
>gb|AF428283.1|AF428283 Arabidopsis thaliana AT4g14500/dl3290w mRNA, complete cds Length = 1764 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 8 tattgtgttacgaagggagttccttatcc 36 |||||||| || ||||||||||||||||| Sbjct: 995 tattgtgtcacaaagggagttccttatcc 1023
>gb|AY657927.1| Synthetic construct Peudomonas aeruginosa clone FLH046013.01F PA3196 gene, partial cds Length = 531 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 agtgggtggtggtcggtagc 456 |||||||||||||||||||| Sbjct: 173 agtgggtggtggtcggtagc 192
>ref|XM_539971.2| PREDICTED: Canis familiaris similar to potassium large conductance pH-sensitive channel, subfamily M, alpha member 3 (LOC482856), mRNA Length = 4041 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 attgctggttctgatggctc 353 |||||||||||||||||||| Sbjct: 1254 attgctggttctgatggctc 1235
>gb|AC091768.4| Homo sapiens BAC clone RP11-703N5 from 7, complete sequence Length = 104955 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 271 agaaaatcagaacacatactgtcacaca 298 ||||||||| |||||||||||| ||||| Sbjct: 71391 agaaaatcataacacatactgttacaca 71418
>gb|AC151819.2| Xenopus tropicalis BAC clone ISB1-243M8 containing hairy2 gene, complete cds, complete sequence Length = 91756 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 atgggcagcaacccatggca 141 |||||||||||||||||||| Sbjct: 3980 atgggcagcaacccatggca 3999
>gb|AE004743.1| Pseudomonas aeruginosa PAO1, section 304 of 529 of the complete genome Length = 10146 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 agtgggtggtggtcggtagc 456 |||||||||||||||||||| Sbjct: 8796 agtgggtggtggtcggtagc 8777
>gb|AC154353.1| Mus musculus BAC clone RP24-547N14 from chromosome 12, complete sequence Length = 249825 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 atatcagctaatgagaaaat 277 |||||||||||||||||||| Sbjct: 25238 atatcagctaatgagaaaat 25257
>dbj|BS000019.1| Pan troglodytes chromosome 22 clone:PTB-023I17, map 22, complete sequences Length = 141751 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 gttccttatcctctttgccc 45 |||||||||||||||||||| Sbjct: 65316 gttccttatcctctttgccc 65335
>emb|AL163209.2|HS21C009 Homo sapiens chromosome 21 segment HS21C009 Length = 340000 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 gttccttatcctctttgccc 45 |||||||||||||||||||| Sbjct: 267630 gttccttatcctctttgccc 267649
>emb|BX255894.19| Zebrafish DNA sequence from clone CH211-251G8 in linkage group 19, complete sequence Length = 180950 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 aacatggtttcaactggaag 438 |||||||||||||||||||| Sbjct: 170023 aacatggtttcaactggaag 170004
>emb|AL831778.8| Mouse DNA sequence from clone RP23-261L23 on chromosome 4, complete sequence Length = 213495 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 atcagctaatgagaaaatca 279 |||||||||||||||||||| Sbjct: 146492 atcagctaatgagaaaatca 146473
>emb|AJ006997.1|HS190A9 Homo sapiens chromosome 21 PAC RPCIP704A9190Q2, complete sequence Length = 123708 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 gttccttatcctctttgccc 45 |||||||||||||||||||| Sbjct: 52157 gttccttatcctctttgccc 52176 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,343,119 Number of Sequences: 3902068 Number of extensions: 4343119 Number of successful extensions: 70361 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70269 Number of HSP's gapped (non-prelim): 75 length of query: 530 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 507 effective length of database: 17,143,297,704 effective search space: 8691651935928 effective search space used: 8691651935928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)