| Clone Name | basd22b09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 450 bits (227), Expect = e-124 Identities = 227/227 (100%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120002 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 119943 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119942 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 119883 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119882 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 119823 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119822 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 119776 Score = 450 bits (227), Expect = e-124 Identities = 227/227 (100%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94892 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 94951 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94952 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 95011 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95012 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 95071 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95072 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 95118
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118783 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 118724 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118723 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 118664 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118663 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 118604 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118603 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 118557
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 913 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 854 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 853 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 794 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 793 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 734 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 733 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 687
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119867 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 119808 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119807 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 119748 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119747 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 119688 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119687 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 119641 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95289 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 95348 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95349 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 95408 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95409 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 95468 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95469 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 95515
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119867 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 119808 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119807 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 119748 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119747 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 119688 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119687 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 119641 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95289 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 95348 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95349 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 95408 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95409 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 95468 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95469 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 95515
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119816 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 119757 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119756 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 119697 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119696 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 119637 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119636 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 119590 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95234 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 95293 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95294 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 95353 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95354 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 95413 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95414 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 95460
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507867 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 31507926 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507927 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 31507986 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507987 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 31508046 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508047 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 31508093
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84729 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 84670 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84669 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 84610 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84609 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 84550 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84549 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 84503
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119836 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 119777 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119776 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 119717 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119716 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 119657 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119656 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 119610 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95282 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 95341 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95342 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 95401 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95402 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 95461 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95462 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 95508
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122331 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 122390 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122391 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 122450 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122451 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 122510 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122511 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 122557 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14056 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 14115 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14116 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 14175 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14176 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 14235 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14236 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 14282
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140864 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 140923 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140924 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 140983 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140984 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 141043 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141044 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 141090
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93460 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 93519 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93520 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 93579 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93580 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 93639 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93640 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 93686
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44827 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 44768 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44767 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 44708 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44707 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 44648 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44647 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 44601 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20291 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 20350 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20351 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 20410 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20411 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 20470 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20471 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 20517
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58555 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 58496 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58495 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 58436 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58435 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 58376 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58375 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 58329
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1456 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 1397 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1396 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 1337 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1336 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 1277 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1276 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 1230
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27524 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 27583 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27584 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 27643 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27644 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 27703 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27704 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 27750
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268216 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 9268275 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268276 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 9268335 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268336 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 9268395 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268396 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 9268442 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227716 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 9227775 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227776 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 9227835 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227836 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 9227895 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227896 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 9227942 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164305 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 9164364 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164365 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 9164424 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164425 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 9164484 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164485 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 9164531 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056130 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 9056189 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056190 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 9056249 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056250 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 9056309 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056310 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 9056356
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938201 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 19938260 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938261 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 19938320 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938321 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 19938380 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938381 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 19938427 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387068 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 10387127 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387128 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 10387187 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387188 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 10387247 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387248 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 10387294 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277230 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 10277171 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277170 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 10277111 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277110 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 10277051 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277050 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 10277004
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598383 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 31598442 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598443 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 31598502 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598503 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 31598562 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598563 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 31598609
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525699 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 33525758 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525759 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 33525818 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525819 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 33525878 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525879 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 33525925
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47842 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 47783 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47782 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 47723 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47722 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 47663 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47662 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 47616
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70896 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 70955 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70956 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 71015 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71016 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 71075 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71076 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 71122
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123666 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 123607 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123606 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 123547 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123546 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 123487 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123486 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 123440 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99171 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 99230 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99231 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 99290 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99291 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 99350 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99351 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 99397
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 127 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 187 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 247 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 294
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 128 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 188 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 248 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 295
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 124 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 184 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 244 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 291
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949477 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 19949536 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949537 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 19949596 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949597 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 19949656 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949657 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 19949703 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393107 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 10393166 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393167 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 10393226 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393227 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 10393286 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393287 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 10393333 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283269 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 10283210 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283209 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 10283150 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283149 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 10283090 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283089 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 10283043
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124383 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 124324 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124323 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 124264 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124263 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 124204 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124203 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 124157 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99848 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 99907 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99908 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 99967 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99968 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 100027 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100028 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 100074
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119810 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 119751 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119750 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 119691 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119690 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 119631 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119630 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 119584 Score = 442 bits (223), Expect = e-121 Identities = 226/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95229 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 95288 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95289 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 95348 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95349 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 95408 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95409 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 95455
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 440 bits (222), Expect = e-121 Identities = 225/226 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 127 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 187 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 247 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 440 bits (222), Expect = e-121 Identities = 225/226 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 127 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 187 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 247 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 293
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 434 bits (219), Expect = e-119 Identities = 225/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123400 aaatgcttcggggagttgaaattaagcatagatccggagattcccaaataggtcaacctt 123341 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123340 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 123281 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123280 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 123221 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123220 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 123174
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 434 bits (219), Expect = e-119 Identities = 225/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242065 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 9242006 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242005 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 9241946 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9241945 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggag 9241886 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241885 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 9241839 Score = 67.9 bits (34), Expect = 1e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 108 actgaaacatcttagtagccagaggaaaagaaag 141 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 434 bits (219), Expect = e-119 Identities = 225/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 12825941 aaatgcttcggggagttgaaattaagcatagatccggagattcccaaataggtcaacctt 12825882 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825881 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 12825822 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825821 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 12825762 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825761 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 12825715
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 434 bits (219), Expect = e-119 Identities = 225/227 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53278 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 53219 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53218 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 53159 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 53158 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggag 53099 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53098 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 53052
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 434 bits (219), Expect = e-119 Identities = 225/227 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 84 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 144 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 204 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 205 cagcctaaaccgtgaaaacggggttgtgggagagcagtacaagcgtt 251
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 426 bits (215), Expect = e-116 Identities = 224/227 (98%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123605 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 123546 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123545 ttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 123486 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123485 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 123426 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 123425 cagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgtt 123379 Score = 426 bits (215), Expect = e-116 Identities = 224/227 (98%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99132 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 99191 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99192 ttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 99251 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99252 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 99311 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 99312 cagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgtt 99358
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 426 bits (215), Expect = e-116 Identities = 224/227 (98%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5485 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 5544 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5545 ttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 5604 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5605 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 5664 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5665 cagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgtt 5711
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 426 bits (215), Expect = e-116 Identities = 224/227 (98%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 132 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 ttgaactgcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 192 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 252 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 253 cagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagcgtt 299
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 408 bits (206), Expect = e-111 Identities = 222/226 (98%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 136521 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctt 136462 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 136461 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 136403 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136402 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 136343 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136342 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 136297 Score = 408 bits (206), Expect = e-111 Identities = 222/226 (98%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 105904 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctt 105963 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105964 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 106022 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106023 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 106082 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106083 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 106128
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 406 bits (205), Expect = e-110 Identities = 208/209 (99%) Strand = Plus / Plus Query: 19 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 78 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 79 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 139 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 199 cggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgtt 209
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 400 bits (202), Expect = e-109 Identities = 221/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 132705 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctt 132646 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 132645 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 132587 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132586 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 132527 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132526 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 132481 Score = 400 bits (202), Expect = e-109 Identities = 221/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 104173 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctt 104232 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 104233 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 104291 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104292 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 104351 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104352 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 104397
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 400 bits (202), Expect = e-109 Identities = 221/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 131597 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctt 131538 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 131537 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 131479 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131478 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 131419 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131418 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 131373 Score = 400 bits (202), Expect = e-109 Identities = 221/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 103038 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctt 103097 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 103098 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 103156 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103157 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 103216 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103217 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 103262
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 400 bits (202), Expect = e-109 Identities = 221/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 140290 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctt 140231 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 140230 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 140172 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140171 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 140112 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140111 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 140066 Score = 400 bits (202), Expect = e-109 Identities = 221/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 109770 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctt 109829 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 109830 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 109888 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109889 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 109948 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109949 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 109994
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 400 bits (202), Expect = e-109 Identities = 221/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 139516 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctt 139457 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 139456 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 139398 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139397 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 139338 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139337 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 139292 Score = 400 bits (202), Expect = e-109 Identities = 221/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 110429 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctt 110488 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 110489 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 110547 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110548 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 110607 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110608 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 110653
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 400 bits (202), Expect = e-109 Identities = 221/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 134911 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctt 134852 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 134851 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 134793 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134792 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 134733 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134732 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 134687 Score = 400 bits (202), Expect = e-109 Identities = 221/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 105371 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctt 105430 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105431 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 105489 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105490 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 105549 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105550 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 105595
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 400 bits (202), Expect = e-109 Identities = 221/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 67 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctt 126 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 127 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 185 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 245 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 291
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 400 bits (202), Expect = e-109 Identities = 221/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 134153 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctt 134094 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 134093 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 134035 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134034 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 133975 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133974 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 133929 Score = 400 bits (202), Expect = e-109 Identities = 221/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 103818 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctt 103877 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 103878 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 103936 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103937 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 103996 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103997 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 104042
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 400 bits (202), Expect = e-109 Identities = 221/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 132698 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctt 132639 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 132638 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 132580 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132579 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 132520 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132519 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 132474 Score = 400 bits (202), Expect = e-109 Identities = 221/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 104171 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggttaacctt 104230 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 104231 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 104289 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104290 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 104349 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104350 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 104395
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 45 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 104 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 163 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 223 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 269
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 136230 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 136171 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 136170 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 136112 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136111 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 136052 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136051 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 136006 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 106400 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 106459 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106460 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 106518 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106519 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 106578 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106579 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 106624
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| Sbjct: 106075 aaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctt 106134 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106135 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 106193 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106194 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 106253 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106254 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 106299 Score = 379 bits (191), Expect = e-102 Identities = 220/227 (96%), Gaps = 2/227 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| Sbjct: 135834 aaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctt 135775 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135774 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 135716 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135715 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 135656 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagc-aatacaagcgt 226 ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135655 cagcctaaaccgtgaaaacggggttgtgggagagcaaatacaagcgt 135609
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 142038 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatgggtcaacctt 141979 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 141978 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 141920 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141919 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 141860 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141859 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 141814 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 111619 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatgggtcaacctt 111678 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 111679 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 111737 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111738 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 111797 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111798 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 111843
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 136868 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 136809 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 136808 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 136750 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136749 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 136690 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136689 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 136644 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 106689 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 106748 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106749 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 106807 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106808 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 106867 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106868 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 106913
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 1594 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 1653 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1654 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 1712 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1713 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 1772 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1773 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 1818
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 135476 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 135417 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135416 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 135358 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135357 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 135298 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135297 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 135252 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 105560 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 105619 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105620 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 105678 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105679 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 105738 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105739 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 105784
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 78 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctt 137 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 196 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 agtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 256 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 302
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 78 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctt 137 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 196 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 agtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 256 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 302
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 78 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctt 137 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 196 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 agtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 256 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 302
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 78 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctt 137 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 196 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 agtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 256 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 302
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 78 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctt 137 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 196 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 agtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 256 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 302
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 127794 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctt 127735 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 127734 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 127676 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 127675 agtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggag 127616 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127615 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 127570 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 107128 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctt 107187 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107188 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 107246 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 107247 agtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggag 107306 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107307 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 107352
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 135611 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 135552 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135551 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 135493 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135492 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 135433 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135432 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 135387 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 105732 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 105791 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105792 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 105850 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105851 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 105910 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105911 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 105956
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 135609 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 135550 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135549 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 135491 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135490 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 135431 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135430 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 135385 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 105729 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 105788 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105789 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 105847 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105848 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 105907 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105908 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 105953
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 135521 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 135462 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135461 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 135403 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135402 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 135343 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135342 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 135297 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 105607 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 105666 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105667 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 105725 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105726 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 105785 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105786 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 105831
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| Sbjct: 136110 aaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctt 136051 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 136050 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 135992 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135991 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 135932 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135931 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 135886 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||| Sbjct: 106297 aaatgcttcggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctt 106356 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106357 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 106415 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106416 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 106475 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106476 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 106521
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 136228 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 136169 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 136168 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 136110 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136109 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 136050 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136049 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 136004 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 106398 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 106457 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106458 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 106516 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106517 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 106576 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106577 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 106622
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 139643 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctt 139584 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 139583 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 139525 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139524 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 139465 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139464 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 139419 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 109656 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctt 109715 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 109716 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 109774 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109775 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 109834 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109835 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 109880
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 135488 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 135429 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135428 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 135370 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135369 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 135310 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135309 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 135264 Score = 392 bits (198), Expect = e-106 Identities = 220/226 (97%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 105574 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 105633 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 105634 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 105692 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105693 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 105752 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105753 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 105798
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 391 bits (197), Expect = e-106 Identities = 200/201 (99%) Strand = Plus / Plus Query: 27 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 86 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 87 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 147 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 207 tgggagagcaatacaagcgtt 227 ||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgtt 201
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 389 bits (196), Expect = e-105 Identities = 199/200 (99%) Strand = Plus / Plus Query: 28 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 87 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 88 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 148 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 208 gggagagcaatacaagcgtt 227 |||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgtt 200
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 385 bits (194), Expect = e-104 Identities = 219/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 131721 aaatgcttcggggagttgaaaataagcagagatccggagattcccgaataggtcaacctt 131662 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 131661 tcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 131603 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131602 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 131543 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131542 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 131497 Score = 385 bits (194), Expect = e-104 Identities = 219/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 101724 aaatgcttcggggagttgaaaataagcagagatccggagattcccgaataggtcaacctt 101783 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 101784 tcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 101842 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101843 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 101902 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101903 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 101948
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 385 bits (194), Expect = e-104 Identities = 219/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| Sbjct: 132928 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaacctt 132869 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 132868 ttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 132810 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132809 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 132750 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 132749 cagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgt 132704 Score = 385 bits (194), Expect = e-104 Identities = 219/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| Sbjct: 103836 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaacctt 103895 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 103896 ttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 103954 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103955 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 104014 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 104015 cagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgt 104060
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 385 bits (194), Expect = e-104 Identities = 219/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 46322 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctt 46381 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 46382 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 46440 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46441 actagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaa 46500 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46501 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 46546
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 385 bits (194), Expect = e-104 Identities = 219/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 78 aaatgcttcggggggttgaaaataagcgtagatccggagattcccgaataggtcaacctt 137 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 196 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 agtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 256 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 302
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 385 bits (194), Expect = e-104 Identities = 219/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 47 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctt 106 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107 tcaaactgc-tgccgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 165 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 agtaaccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 225 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 226 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 271
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 385 bits (194), Expect = e-104 Identities = 219/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 130465 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctt 130406 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 130405 tcgaactac-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 130347 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130346 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 130287 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130286 cagcctaaaccgtgaaaacggggttgtgggagagctatacaagcgt 130241 Score = 385 bits (194), Expect = e-104 Identities = 219/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 101991 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtcaacctt 102050 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 102051 tcgaactac-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 102109 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102110 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 102169 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102170 cagcctaaaccgtgaaaacggggttgtgggagagctatacaagcgt 102215
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 385 bits (194), Expect = e-104 Identities = 219/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||| Sbjct: 135959 aaatgcttcggggagttgaaaataagcatagatccggggattcccgaatagggcaacctt 135900 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135899 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 135841 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135840 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 135781 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135780 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 135735 Score = 385 bits (194), Expect = e-104 Identities = 219/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||| Sbjct: 106179 aaatgcttcggggagttgaaaataagcatagatccggggattcccgaatagggcaacctt 106238 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106239 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 106297 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106298 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 106357 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106358 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 106403
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 383 bits (193), Expect = e-103 Identities = 196/197 (99%) Strand = Plus / Plus Query: 31 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 90 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 211 agagcaatacaagcgtt 227 ||||||||||||||||| Sbjct: 181 agagcaatacaagcgtt 197
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 377 bits (190), Expect = e-101 Identities = 218/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| Sbjct: 69 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaacctt 128 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 129 ttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 187 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 247 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 ||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 248 cagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgt 293
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 377 bits (190), Expect = e-101 Identities = 218/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| Sbjct: 133889 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaacctt 133830 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 133829 ttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 133771 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133770 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 133711 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 ||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 133710 cagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgt 133665 Score = 377 bits (190), Expect = e-101 Identities = 218/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| Sbjct: 104760 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggttaacctt 104819 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 104820 ttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 104878 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104879 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 104938 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 ||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 104939 cagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaagcgt 104984
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 377 bits (190), Expect = e-101 Identities = 218/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 4570 aaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaacctt 4629 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| |||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 4630 tcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatctt 4688 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4689 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 4748 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4749 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 4794
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 377 bits (190), Expect = e-101 Identities = 218/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 4570 aaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaacctt 4629 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| |||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 4630 tcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatctt 4688 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4689 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 4748 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4749 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 4794
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 371 bits (187), Expect = e-100 Identities = 219/227 (96%), Gaps = 2/227 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 70 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctt 129 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 130 tcaaactgc-tgctgaatccatgggcaggcaagagacaacctaacgaactgaaacatctt 188 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagc-ggcgagcgaaatggga 179 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 189 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaaatggga 248 Query: 180 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 295
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 369 bits (186), Expect = 3e-99 Identities = 217/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 139434 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctt 139375 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 139374 tcgaactgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatctt 139316 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139315 agtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 139256 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 139255 cagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgt 139210 Score = 369 bits (186), Expect = 3e-99 Identities = 217/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 109663 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctt 109722 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 109723 tcgaactgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatctt 109781 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109782 agtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 109841 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 109842 cagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgt 109887
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 369 bits (186), Expect = 3e-99 Identities = 217/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 4301 aaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaacctt 4360 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| |||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 4361 tcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatctt 4419 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4420 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaa 4479 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4480 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 4525
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 369 bits (186), Expect = 3e-99 Identities = 217/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 119 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctt 178 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 179 tcgaactgc-tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatctt 237 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 agtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 297 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 298 cagcctaaaccgtgaaaacggggttgtgggagagcaataaaagcgt 343
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 369 bits (186), Expect = 3e-99 Identities = 218/226 (96%), Gaps = 2/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 1836 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 1895 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1896 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaccatctt 1954 Query: 121 agtagccagaggaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatggga 179 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1955 agtagccagaggaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatggga 2014 Query: 180 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcg 225 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2015 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcg 2060
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 369 bits (186), Expect = 3e-99 Identities = 217/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 23624 aaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaacctt 23565 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| |||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 23564 tcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatctt 23506 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23505 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaa 23446 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23445 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 23400
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 369 bits (186), Expect = 3e-99 Identities = 217/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||| Sbjct: 78 aaatgcttcggggagttgaaaataagccgagatccggagattcccgaatagggcaacctt 137 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138 tcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 196 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 256 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 302
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 369 bits (186), Expect = 3e-99 Identities = 217/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||| Sbjct: 78 aaatgcttcggggagttgaaaataagccgagatccggagattcccgaatagggcaacctt 137 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138 tcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 196 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 256 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 302
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 369 bits (186), Expect = 3e-99 Identities = 217/226 (96%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||| Sbjct: 566 aaatgcttcggggagttgaaaataagccgagatccggagattcccgaatagggcaacctt 625 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||| | ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 626 tcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 684 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 685 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 744 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 790
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 363 bits (183), Expect = 2e-97 Identities = 219/227 (96%), Gaps = 3/227 (1%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 170 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 229 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 230 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 288 Query: 121 agt-agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 289 agtgagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 348 Query: 180 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 349 gcagcctaaaccgtgaaaac-gggttgtgggagagcaatacaagcgt 394
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 361 bits (182), Expect = 6e-97 Identities = 216/226 (95%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||| Sbjct: 142809 aaatgcttcggggagttgaaaataagcgcagatccggagattcccgaatgggtcaacctt 142750 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 142749 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 142691 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142690 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 142631 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 142630 cagcctaaaccgtgaaaacggggttgtgggagagtcatacaagcgt 142585 Score = 361 bits (182), Expect = 6e-97 Identities = 216/226 (95%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||| Sbjct: 110519 aaatgcttcggggagttgaaaataagcgcagatccggagattcccgaatgggtcaacctt 110578 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 110579 tcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 110637 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110638 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 110697 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110698 cagcctaaaccgtgaaaacggggttgtgggagagtcatacaagcgt 110743
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 355 bits (179), Expect = 4e-95 Identities = 210/219 (95%), Gaps = 1/219 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 52616 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 52557 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||||| Sbjct: 52556 ttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaacatctt 52498 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 52497 agtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggag 52438 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaata 219 |||||||||||| |||||||||||||||||||||||||| Sbjct: 52437 cagcctaaaccgcgaaaacggggttgtgggagagcaata 52399 Score = 355 bits (179), Expect = 4e-95 Identities = 210/219 (95%), Gaps = 1/219 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 37212 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 37271 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||||| Sbjct: 37272 ttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaacatctt 37330 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 37331 agtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggag 37390 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaata 219 |||||||||||| |||||||||||||||||||||||||| Sbjct: 37391 cagcctaaaccgcgaaaacggggttgtgggagagcaata 37429
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 355 bits (179), Expect = 4e-95 Identities = 210/219 (95%), Gaps = 1/219 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 4140 aaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaacctt 4199 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||||| Sbjct: 4200 ttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaacatctt 4258 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4259 agtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggag 4318 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaata 219 |||||||||||| |||||||||||||||||||||||||| Sbjct: 4319 cagcctaaaccgcgaaaacggggttgtgggagagcaata 4357
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 349 bits (176), Expect = 2e-93 Identities = 207/216 (95%), Gaps = 1/216 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||| Sbjct: 88418 aaatgcttcggggagttgaaaattagcatagatccggagattcccgaataggttaacctt 88477 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 88478 tttcactgc-tgctgaatccatgggcaggcaagagacaacctggtgaactgaaacatctt 88536 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88537 agtagccagaggaatagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 88596 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagca 216 |||||||||||||||||||||||||||||||||||| Sbjct: 88597 cagcctaaaccgtgaaaacggggttgtgggagagca 88632
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 347 bits (175), Expect = 9e-93 Identities = 206/215 (95%), Gaps = 1/215 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||| | Sbjct: 86332 aaatgcttcggggagttgaaaatgagcatagatccggagattcccgaataggttaaccct 86391 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 86392 tttaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 86450 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 86451 agtagccagaggaatagaaagcaaaagcgattcccgtagtagtggcgagcgaaatgggag 86510 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagc 215 ||||||||||||||||||||||||||||||||||| Sbjct: 86511 cagcctaaaccgtgaaaacggggttgtgggagagc 86545
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 347 bits (175), Expect = 9e-93 Identities = 209/219 (95%), Gaps = 1/219 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| |||||| Sbjct: 71 aaatgcttcggggagctgaaaataagcatagatccggagattcccgaatgggttaacctt 130 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 131 ttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatctt 189 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 190 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 249 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaata 219 |||||||||||||||||||||||||||||||||||||| Sbjct: 250 tagcctaaaccgtgaaaacggggttgtgggagagcaata 288
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 345 bits (174), Expect = 4e-92 Identities = 214/226 (94%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||| Sbjct: 177101 aaatgcttcggggagttgaaaatcagcatagatccggagattcccgaatagggcaacctt 177160 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| ||||||||||||| |||||||||||| |||| |||||||||||| ||||| Sbjct: 177161 tcgaactgc-tgctgaatccatgggcaggcaagagagaaccaggcgaactgaaagatctt 177219 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 177220 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgggcgaaatgggag 177279 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177280 ctgcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 177325 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Plus Query: 104 gcgaactgaaacatcttagtagc 126 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Plus Query: 104 gcgaactgaaacatcttagtagc 126 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 341 bits (172), Expect = 6e-91 Identities = 213/224 (95%), Gaps = 2/224 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaa-ataggtcaacct 59 ||||||||||||||||||||||||||| ||||||||| ||||||| | |||||||||||| Sbjct: 131801 aaatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtcaacct 131742 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || |||||| ||||||||||| | |||||||||||||||||||| |||||||||||||| Sbjct: 131741 ttcgaactgc-tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatct 131683 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131682 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 131623 Query: 180 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 223 |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 131622 gcagcctaaaccgtgaaaacggggttgtgggagagctatacaag 131579 Score = 341 bits (172), Expect = 6e-91 Identities = 213/224 (95%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaa-ataggtcaacct 59 ||||||||||||||||||||||||||| ||||||||| ||||||| | |||||||||||| Sbjct: 103593 aaatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtcaacct 103652 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || |||||| ||||||||||| | |||||||||||||||||||| |||||||||||||| Sbjct: 103653 ttcgaactgc-tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatct 103711 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103712 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 103771 Query: 180 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 223 |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 103772 gcagcctaaaccgtgaaaacggggttgtgggagagctatacaag 103815
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 335 bits (169), Expect = 4e-89 Identities = 206/217 (94%), Gaps = 1/217 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 2114 aaatgcttcggggagctgaaaataagcatagatccggagattcccgaataggttaacctt 2173 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 2174 ttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatctt 2232 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2233 agtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggac 2292 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaa 217 |||||||||||||||||||||||||||||||||||| Sbjct: 2293 tagcctaaaccgtgaaaacggggttgtgggagagcaa 2329
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 335 bits (169), Expect = 4e-89 Identities = 200/209 (95%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 79700 aaatgcttcggggagttgaaaataagcatagatccgaggattcccgaataggtcaacctt 79641 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | |||||| |||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 79640 tcgaactgc-tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatctt 79582 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79581 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaa 79522 Query: 181 cagcctaaaccgtgaaaacggggttgtgg 209 ||||||||||||||||||||||||||||| Sbjct: 79521 cagcctaaaccgtgaaaacggggttgtgg 79493
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 335 bits (169), Expect = 4e-89 Identities = 206/217 (94%), Gaps = 1/217 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 118079 aaatgcttcggggagctgaaaataagcatagatccggagattcccgaataggttaacctt 118020 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 118019 ttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatctt 117961 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 117960 agtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggac 117901 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaa 217 |||||||||||||||||||||||||||||||||||| Sbjct: 117900 tagcctaaaccgtgaaaacggggttgtgggagagcaa 117864 Score = 335 bits (169), Expect = 4e-89 Identities = 206/217 (94%), Gaps = 1/217 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 90023 aaatgcttcggggagctgaaaataagcatagatccggagattcccgaataggttaacctt 90082 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 90083 ttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatctt 90141 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 90142 agtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggac 90201 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaa 217 |||||||||||||||||||||||||||||||||||| Sbjct: 90202 tagcctaaaccgtgaaaacggggttgtgggagagcaa 90238
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 333 bits (168), Expect = 1e-88 Identities = 212/224 (94%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaa-ataggtcaacct 59 ||||||||||||||||||||||||||| ||||||||| ||||||| | |||||||||||| Sbjct: 2669 aaatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtcaacct 2728 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || |||||| ||||||||||| | |||||||||||||||| ||| |||||||||||||| Sbjct: 2729 ttcgaactgc-tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatct 2787 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2788 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 2847 Query: 180 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 223 |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2848 gcagcctaaaccgtgaaaacggggttgtgggagagctatacaag 2891
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 333 bits (168), Expect = 1e-88 Identities = 212/224 (94%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaa-ataggtcaacct 59 ||||||||||||||||||||||||||| ||||||||| ||||||| | |||||||||||| Sbjct: 924 aaatgcttcggggagttgaaaataagcgtagatccggggattcccgatataggtcaacct 983 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || |||||| ||||||||||| | |||||||||||||||| ||| |||||||||||||| Sbjct: 984 ttcgaactgc-tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatct 1042 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1043 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 1102 Query: 180 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 223 |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1103 gcagcctaaaccgtgaaaacggggttgtgggagagctatacaag 1146
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 325 bits (164), Expect = 3e-86 Identities = 186/192 (96%), Gaps = 1/192 (0%) Strand = Plus / Minus Query: 35 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 94 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 95 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 154 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 155 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 215 caatacaagcgt 226 |||||||||||| Sbjct: 333 caatacaagcgt 322
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 325 bits (164), Expect = 3e-86 Identities = 164/164 (100%) Strand = Plus / Plus Query: 64 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 123 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 124 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 184 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 164
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 323 bits (163), Expect = 1e-85 Identities = 212/227 (93%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||| Sbjct: 3960 aaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaacctt 4019 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| || || | |||||||||||| ||||||||||||||||||| Sbjct: 4020 ttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatctt 4078 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4079 agtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 4138 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4139 tagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgtt 4185
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 323 bits (163), Expect = 1e-85 Identities = 212/227 (93%), Gaps = 1/227 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| ||||||| ||||| ||||||||||||||| ||||||| |||||| Sbjct: 146489 aaatgcttcggggagctgaaaatgagcatggatccggagattcccgaataggttaacctt 146430 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||| | |||||||| ||| |||||| ||||||||||||||||||||||||||||| Sbjct: 146429 ttgaactac-tgctgaattcataggcaggcgagagacaacctggcgaactgaaacatctt 146371 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146370 agtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 146311 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 146310 tagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgtt 146264 Score = 323 bits (163), Expect = 1e-85 Identities = 212/227 (93%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| ||||||| ||||| ||||||||||||||| ||||||| |||||| Sbjct: 111973 aaatgcttcggggagctgaaaatgagcatggatccggagattcccgaataggttaacctt 112032 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||| | |||||||| ||| |||||| ||||||||||||||||||||||||||||| Sbjct: 112033 ttgaactac-tgctgaattcataggcaggcgagagacaacctggcgaactgaaacatctt 112091 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112092 agtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 112151 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 112152 tagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgtt 112198
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 323 bits (163), Expect = 1e-85 Identities = 212/227 (93%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||| Sbjct: 70 aaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaacctt 129 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| || || | |||||||||||| ||||||||||||||||||| Sbjct: 130 ttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatctt 188 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 agtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 248 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 249 tagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgtt 295
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 323 bits (163), Expect = 1e-85 Identities = 212/227 (93%), Gaps = 1/227 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||| Sbjct: 151175 aaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaacctt 151116 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| || || | |||||||||||| ||||||||||||||||||| Sbjct: 151115 ttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatctt 151057 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151056 agtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 150997 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 150996 tagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgtt 150950 Score = 323 bits (163), Expect = 1e-85 Identities = 212/227 (93%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||| Sbjct: 117491 aaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaacctt 117550 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| || || | |||||||||||| ||||||||||||||||||| Sbjct: 117551 ttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatctt 117609 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117610 agtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 117669 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 117670 tagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgtt 117716
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 323 bits (163), Expect = 1e-85 Identities = 212/227 (93%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||| Sbjct: 70 aaatgcttcggggagctgaaaagaagcatagatccggagattcccgaataggttaacctt 129 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| || || | |||||||||||| ||||||||||||||||||| Sbjct: 130 ttgaactgc-tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatctt 188 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 agtagccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 248 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt 227 |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 249 tagcctaaaccgtgaaaacggggttgtgggagagcaatataagcgtt 295
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 319 bits (161), Expect = 2e-84 Identities = 204/217 (94%), Gaps = 1/217 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| |||||| Sbjct: 71 aaatgcttcggggagctgaaaataagcatggatccggagattcccgaataggttaacctt 130 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| ||| |||| ||||||||||||||||||||||||||||||| Sbjct: 131 ttgaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaacatctt 189 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 190 agtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggag 249 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaa 217 ||||||||||||||||||||||||||||| |||||| Sbjct: 250 tagcctaaaccgtgaaaacggggttgtgggggagcaa 286
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 317 bits (160), Expect = 8e-84 Identities = 163/164 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75836 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 75895 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75896 ttaaactgcctgcggaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 75955 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 164 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75956 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 75999 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ggcgaactgaaacatcttag 122 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 315 bits (159), Expect = 3e-83 Identities = 202/215 (93%), Gaps = 1/215 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| |||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 54 aaatgcttcggggagctgaaaataagtatagatccggagattcccgaataggttaacctt 113 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 ||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 114 ttaaactgc-tgctgaatccataggcgggcaagagacaacctggcgaactgaaacatctt 172 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||| |||||| |||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 173 agtagccggaggaagagaaagcaaaagcgattctcgtagtagcggcgagcgaaacgggag 232 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagc 215 |||||||||||||||||||||||||||||| |||| Sbjct: 233 cagcctaaaccgtgaaaacggggttgtgggggagc 267
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 313 bits (158), Expect = 1e-82 Identities = 210/226 (92%), Gaps = 1/226 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||| |||||||| ||| || |||||| Sbjct: 70 aaatgcttcggggagttgaaaataagcatagatccgtagattcccgaatggggtaacctt 129 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | | ||||| |||| |||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 130 tcacactgc-tgctcaatccatgggcaggaaagagacaacctggcgaactgaaacatctt 188 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 189 agtagccagaggaaaataaagcaaaagcgattcccatagtagcggcgagcgaaatgggat 248 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 249 cagcctaaaccgcgaaaacggggttgtgggagagcaataaaagcgt 294
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 313 bits (158), Expect = 1e-82 Identities = 207/222 (93%), Gaps = 1/222 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||| Sbjct: 128376 aaatgcttcggggagctgaaaacaagcatagatccggagattcccgaataggttaacctt 128317 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 128316 ttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatctt 128258 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 128257 agtagccagaggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggag 128198 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaa 222 ||||||||||||||||||||||||||||| |||| |||||| Sbjct: 128197 tagcctaaaccgtgaaaacggggttgtgggggagcgatacaa 128156 Score = 313 bits (158), Expect = 1e-82 Identities = 207/222 (93%), Gaps = 1/222 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| |||||| |||||||||||||||||||||| ||||||| |||||| Sbjct: 95071 aaatgcttcggggagctgaaaacaagcatagatccggagattcccgaataggttaacctt 95130 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| |||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 95131 ttgaactgc-tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatctt 95189 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 95190 agtagccagaggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggag 95249 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaa 222 ||||||||||||||||||||||||||||| |||| |||||| Sbjct: 95250 tagcctaaaccgtgaaaacggggttgtgggggagcgatacaa 95291
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 305 bits (154), Expect = 3e-80 Identities = 157/158 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75642 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 75583 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75582 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 75523 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgta 158 |||||||||||||||||||||||||||||||||||||| Sbjct: 75522 agtagccagaggaaaagaaagcaaaagcgattcccgta 75485 Score = 147 bits (74), Expect = 2e-32 Identities = 74/74 (100%) Strand = Plus / Minus Query: 154 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 214 gcaatacaagcgtt 227 |||||||||||||| Sbjct: 75418 gcaatacaagcgtt 75405 Score = 71.9 bits (36), Expect = 8e-10 Identities = 39/40 (97%) Strand = Plus / Minus Query: 85 gcaggcaagagacaacctggcgaactgaaacatcttagta 124 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 305 bits (154), Expect = 3e-80 Identities = 157/158 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381896 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 381955 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381956 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 382015 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgta 158 |||||||||||||||||||||||||||||||||||||| Sbjct: 382016 agtagccagaggaaaagaaagcaaaagcgattcccgta 382053 Score = 147 bits (74), Expect = 2e-32 Identities = 74/74 (100%) Strand = Plus / Plus Query: 154 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 214 gcaatacaagcgtt 227 |||||||||||||| Sbjct: 382120 gcaatacaagcgtt 382133 Score = 71.9 bits (36), Expect = 8e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 85 gcaggcaagagacaacctggcgaactgaaacatcttagta 124 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 8e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 85 gcaggcaagagacaacctggcgaactgaaacatcttagta 124 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 305 bits (154), Expect = 3e-80 Identities = 157/158 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113733 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 113674 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113673 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 113614 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgta 158 |||||||||||||||||||||||||||||||||||||| Sbjct: 113613 agtagccagaggaaaagaaagcaaaagcgattcccgta 113576 Score = 147 bits (74), Expect = 2e-32 Identities = 74/74 (100%) Strand = Plus / Minus Query: 154 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 214 gcaatacaagcgtt 227 |||||||||||||| Sbjct: 113509 gcaatacaagcgtt 113496 Score = 71.9 bits (36), Expect = 8e-10 Identities = 39/40 (97%) Strand = Plus / Minus Query: 85 gcaggcaagagacaacctggcgaactgaaacatcttagta 124 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 305 bits (154), Expect = 3e-80 Identities = 157/158 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368415 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 368356 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368355 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 368296 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgta 158 |||||||||||||||||||||||||||||||||||||| Sbjct: 368295 agtagccagaggaaaagaaagcaaaagcgattcccgta 368258 Score = 305 bits (154), Expect = 3e-80 Identities = 157/158 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185020 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 184961 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184960 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 184901 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgta 158 |||||||||||||||||||||||||||||||||||||| Sbjct: 184900 agtagccagaggaaaagaaagcaaaagcgattcccgta 184863 Score = 147 bits (74), Expect = 2e-32 Identities = 74/74 (100%) Strand = Plus / Minus Query: 154 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 214 gcaatacaagcgtt 227 |||||||||||||| Sbjct: 368191 gcaatacaagcgtt 368178 Score = 147 bits (74), Expect = 2e-32 Identities = 74/74 (100%) Strand = Plus / Minus Query: 154 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 214 gcaatacaagcgtt 227 |||||||||||||| Sbjct: 184796 gcaatacaagcgtt 184783 Score = 71.9 bits (36), Expect = 8e-10 Identities = 39/40 (97%) Strand = Plus / Minus Query: 85 gcaggcaagagacaacctggcgaactgaaacatcttagta 124 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 305 bits (154), Expect = 3e-80 Identities = 206/222 (92%), Gaps = 1/222 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| |||||||||| || ||||||||||||||| ||||||| |||||| Sbjct: 71 aaatgcttcggggagctgaaaataagtatggatccggagattcccgaataggttaacctt 130 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 ||||||||| |||||||| ||| || |||||||||||||| |||||||||||||||||| Sbjct: 131 ttaaactgc-tgctgaattcataggcgggcaagagacaacccggcgaactgaaacatctt 189 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 190 agtagccggaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggag 249 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagcaatacaa 222 | |||||||||||||||||||||||||||| |||| |||||| Sbjct: 250 cggcctaaaccgtgaaaacggggttgtgggggagctatacaa 291
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 303 bits (153), Expect = 1e-79 Identities = 156/157 (99%) Strand = Plus / Plus Query: 70 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 129 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 130 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 190 ccgtgaaaacggggttgtgggagagcaatacaagcgt 226 ||||||||||||||||||||||||||||||||||||| Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgt 173
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 301 bits (152), Expect = 5e-79 Identities = 168/172 (97%), Gaps = 1/172 (0%) Strand = Plus / Minus Query: 55 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 114 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 115 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 175 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 165
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 299 bits (151), Expect = 2e-78 Identities = 201/215 (93%), Gaps = 2/215 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| |||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 116139 aaatgcttcggggagctgaaaataagtatagatccggagattcccgaataggttaacctt 116080 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| |||||||| ||| |||| ||||||||||||||||||||||||||||||| Sbjct: 116079 tgaaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaacatctt 116021 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 116020 agtagccagaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaa 115961 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagc 215 ||||||||||||||||||| |||||||||| |||| Sbjct: 115960 cagcctaaaccgtgaaaac-gggttgtgggggagc 115927 Score = 299 bits (151), Expect = 2e-78 Identities = 201/215 (93%), Gaps = 2/215 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| |||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 85981 aaatgcttcggggagctgaaaataagtatagatccggagattcccgaataggttaacctt 86040 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| |||||||| ||| |||| ||||||||||||||||||||||||||||||| Sbjct: 86041 tgaaactgc-tgctgaattcataggcagacaagagacaacctggcgaactgaaacatctt 86099 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 86100 agtagccagaggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaa 86159 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagc 215 ||||||||||||||||||| |||||||||| |||| Sbjct: 86160 cagcctaaaccgtgaaaac-gggttgtgggggagc 86193
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 248 bits (125), Expect = 6e-63 Identities = 178/193 (92%), Gaps = 2/193 (1%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||| || | |||||||||||||||||||| ||||||| |||||| Sbjct: 6505 aaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggttaacctt 6447 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| ||||| ||| | |||||||| ||||||||||||||| Sbjct: 6446 ttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaaacatctt 6388 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6387 agtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 6328 Query: 181 cagcctaaaccgt 193 ||||||||||||| Sbjct: 6327 cagcctaaaccgt 6315 Score = 58.0 bits (29), Expect = 1e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 195 aaaacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||| ||||||| Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgtt 6252
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 246 bits (124), Expect = 3e-62 Identities = 209/227 (92%), Gaps = 14/227 (6%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||| Sbjct: 663 aaatgcttcggggagttgaaaataagcgtagatccggagattcccgaataggtca--ctt 606 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 |||| |||||||||||||| |||||||||||||| || |||| ||| ||||||| Sbjct: 605 ---gactg-ctgctgaatccatg-gcaggcaagagaca--ct-gcga--tga-acatctt 557 Query: 121 agtagccagaggaaaagaaa-gcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 556 agtagccagaggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcgaaatggga 497 Query: 180 gcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgt 226 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 496 gcagcctaaaccgtgaaaacggggttgtgggagagcgatacaagcgt 450
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 234 bits (118), Expect = 1e-58 Identities = 190/214 (88%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| ||||||| | |||||||||||||||||| ||||||| |||||| Sbjct: 143989 aaatgcttcggggagccgaaaataggtatagatccggagattcccgaataggttaacctt 144048 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 |||||||||||||||| || ||||| |||||||||||| |||||||||||||||||| Sbjct: 144049 ccaaactgcctgctgaattcagaagcagacaagagacaacccggcgaactgaaacatctt 144108 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||| ||||| | |||||||||||||||||| ||||| ||||||| |||| |||| Sbjct: 144109 agtagccggaggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaa 144168 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagag 214 ||||||||||||||| ||||||||||||||||| Sbjct: 144169 gagcctaaaccgtgaagacggggttgtgggagag 144202 Score = 234 bits (118), Expect = 1e-58 Identities = 190/214 (88%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| ||||||| | |||||||||||||||||| ||||||| |||||| Sbjct: 88862 aaatgcttcggggagccgaaaataggtatagatccggagattcccgaataggttaacctt 88803 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 |||||||||||||||| || ||||| |||||||||||| |||||||||||||||||| Sbjct: 88802 ccaaactgcctgctgaattcagaagcagacaagagacaacccggcgaactgaaacatctt 88743 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||| ||||| | |||||||||||||||||| ||||| ||||||| |||| |||| Sbjct: 88742 agtagccggaggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaa 88683 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagag 214 ||||||||||||||| ||||||||||||||||| Sbjct: 88682 gagcctaaaccgtgaagacggggttgtgggagag 88649
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 232 bits (117), Expect = 4e-58 Identities = 157/169 (92%), Gaps = 1/169 (0%) Strand = Plus / Minus Query: 50 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 109 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 110 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 169 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 170 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 218 ||||||||||||||||||||||| |||| | ||||||||||||||||| Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaat 3528
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 228 bits (115), Expect = 6e-57 Identities = 190/215 (88%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| || || ||||||||||||| ||| ||| |||||| |||||| Sbjct: 71 aaatgcttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctc 130 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||| | |||||||||||| ||| | |||||| ||||||||||||||||||||||| Sbjct: 131 ttgtactacttgctgaatccataggcaagaaagagataacctggcgaactgaaacatctt 190 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 191 agtagccagaggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggat 250 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagc 215 |||||||||||| |||| ||||||||||||||||| Sbjct: 251 cagcctaaaccgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 228 bits (115), Expect = 6e-57 Identities = 190/215 (88%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| || || ||||||||||||| ||| ||| |||||| |||||| Sbjct: 125194 aaatgcttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctc 125135 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||| | |||||||||||| ||| | |||||| ||||||||||||||||||||||| Sbjct: 125134 ttgtactacttgctgaatccataggcaagaaagagataacctggcgaactgaaacatctt 125075 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 125074 agtagccagaggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggat 125015 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagc 215 |||||||||||| |||| ||||||||||||||||| Sbjct: 125014 cagcctaaaccgcgaaagcggggttgtgggagagc 124980 Score = 228 bits (115), Expect = 6e-57 Identities = 190/215 (88%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| || || ||||||||||||| ||| ||| |||||| |||||| Sbjct: 94672 aaatgcttcggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctc 94731 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||| | |||||||||||| ||| | |||||| ||||||||||||||||||||||| Sbjct: 94732 ttgtactacttgctgaatccataggcaagaaagagataacctggcgaactgaaacatctt 94791 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 94792 agtagccagaggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggat 94851 Query: 181 cagcctaaaccgtgaaaacggggttgtgggagagc 215 |||||||||||| |||| ||||||||||||||||| Sbjct: 94852 cagcctaaaccgcgaaagcggggttgtgggagagc 94886
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 224 bits (113), Expect = 9e-56 Identities = 173/193 (89%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| ||| || |||||| ||||||||||| ||| |||||| ||||| Sbjct: 58 aaatgcttcggggagctgagaacaagcattgatccggagatgcccgaataggggaaccta 117 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||||||||||| || | |||||||||||||||||||||||||||||||||| Sbjct: 118 tttgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatctt 177 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 178 agtagccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaa 237 Query: 181 cagcctaaaccgt 193 ||||||||||||| Sbjct: 238 cagcctaaaccgt 250
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 224 bits (113), Expect = 9e-56 Identities = 116/117 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434036 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 19433977 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 117 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19433976 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 19433920
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 224 bits (113), Expect = 9e-56 Identities = 173/193 (89%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| ||| || |||||| ||||||||||| ||| |||||| ||||| Sbjct: 71 aaatgcttcggggagctgagaacaagcattgatccggagatgcccgaataggggaaccta 130 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||||||||||| || | |||||||||||||||||||||||||||||||||| Sbjct: 131 tttgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatctt 190 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 191 agtagccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaa 250 Query: 181 cagcctaaaccgt 193 ||||||||||||| Sbjct: 251 cagcctaaaccgt 263
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 224 bits (113), Expect = 9e-56 Identities = 116/117 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51563 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 51504 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 117 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51503 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 224 bits (113), Expect = 9e-56 Identities = 116/117 (99%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119527 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 119468 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 117 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119467 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 224 bits (113), Expect = 9e-56 Identities = 116/117 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6095 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 6154 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 117 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6155 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 6211
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 220 bits (111), Expect = 1e-54 Identities = 114/115 (99%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1615 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 1674 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 115 || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1675 ttgaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 1729
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 216 bits (109), Expect = 2e-53 Identities = 137/145 (94%), Gaps = 1/145 (0%) Strand = Plus / Minus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| Sbjct: 89811 aaatgcttcggggagttgaaaataagcgtagatccggagattccggaataggttaacctt 89752 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 89751 ttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 89693 Query: 121 agtagccagaggaaaagaaagcaaa 145 | ||||||||||||||||||||||| Sbjct: 89692 actagccagaggaaaagaaagcaaa 89668
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 216 bits (109), Expect = 2e-53 Identities = 137/145 (94%), Gaps = 1/145 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||| Sbjct: 459 aaatgcttcggggagttgaaaataagcgtagatccggagattccggaataggttaacctt 518 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 519 ttgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatctt 577 Query: 121 agtagccagaggaaaagaaagcaaa 145 | ||||||||||||||||||||||| Sbjct: 578 actagccagaggaaaagaaagcaaa 602
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 214 bits (108), Expect = 9e-53 Identities = 171/192 (89%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||| || ||| || |||||| ||||||||||| ||| |||||| ||||| Sbjct: 175 aaatgcttcgggaagctgagaacaagcattgatccggagatgcccgaataggggaaccta 234 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||||||||||| || | |||||||||||||||||||||||||||||||||| Sbjct: 235 tttgactgcctgctgaattgatagggaggcaagagacaacctggcgaactgaaacatctt 294 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 295 agtagccagaggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaa 354 Query: 181 cagcctaaaccg 192 |||||||||||| Sbjct: 355 cagcctaaaccg 366
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 184 bits (93), Expect = 8e-44 Identities = 166/189 (87%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||| ||||| | |||||||||||||||||||| ||| || |||| Sbjct: 4104 aaatgcttcggggagtcgaaaacaggcatagatccggagattcccgaatggggtaacccc 4163 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||| || | |||||| ||||||| ||||||||||||||| Sbjct: 4164 ttgtactgcc-gctgaatccataggcggataagagagaacctggtgaactgaaacatctt 4222 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 4223 agtagccagaggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggag 4282 Query: 181 cagcctaaa 189 |||||||| Sbjct: 4283 aagcctaaa 4291
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 184 bits (93), Expect = 8e-44 Identities = 166/189 (87%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||| ||||| | |||||||||||||||||||| ||| || |||| Sbjct: 71 aaatgcttcggggagtcgaaaacaggcatagatccggagattcccgaatggggtaacccc 130 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||||||| || | |||||| ||||||| ||||||||||||||| Sbjct: 131 ttgtactgcc-gctgaatccataggcggataagagagaacctggtgaactgaaacatctt 189 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 190 agtagccagaggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggag 249 Query: 181 cagcctaaa 189 |||||||| Sbjct: 250 aagcctaaa 258
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 180 bits (91), Expect = 1e-42 Identities = 91/91 (100%) Strand = Plus / Plus Query: 137 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 197 aacggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgtt 91
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 176 bits (89), Expect = 2e-41 Identities = 182/213 (85%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| || || ||| ||||||||| |||||||| |||||| |||||| Sbjct: 71 aaatgcttcggggagctgcgaacaagtatagatccgaagattcccgaatagggcaacctc 130 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||| |||| ||| ||| | |||| ||||| ||||| | ||||||||||||||| Sbjct: 131 ttgtactacctgtaaaatacataatcaggttagagaaaacctagtgaactgaaacatctt 190 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||| ||||||| | |||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 191 agtagctagaggaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaa 250 Query: 181 cagcctaaaccgtgaaaacggggttgtgggaga 213 ||||||||||||||||| ||||||||||||||| Sbjct: 251 cagcctaaaccgtgaaagcggggttgtgggaga 283
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 176 bits (89), Expect = 2e-41 Identities = 165/189 (87%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||||||||||| ||||| | |||||||||||||||||||| ||| || |||| Sbjct: 71 aaatgcttcggggagtcgaaaacaggcatagatccggagattcccgaatggggtaacccc 130 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || |||||| ||||||| ||| || | |||||| ||||||| ||||||||||||||| Sbjct: 131 ttgtactgcc-gctgaatacataggcggataagagagaacctggtgaactgaaacatctt 189 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 190 agtagccagaggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggag 249 Query: 181 cagcctaaa 189 |||||||| Sbjct: 250 aagcctaaa 258
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 176 bits (89), Expect = 2e-41 Identities = 89/89 (100%) Strand = Plus / Plus Query: 139 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 199 cggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgtt 89
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 176 bits (89), Expect = 2e-41 Identities = 89/89 (100%) Strand = Plus / Plus Query: 139 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 199 cggggttgtgggagagcaatacaagcgtt 227 ||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgtt 89
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 174 bits (88), Expect = 8e-41 Identities = 88/88 (100%) Strand = Plus / Plus Query: 140 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 200 ggggttgtgggagagcaatacaagcgtt 227 |||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgtt 88
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 174 bits (88), Expect = 8e-41 Identities = 88/88 (100%) Strand = Plus / Plus Query: 140 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 200 ggggttgtgggagagcaatacaagcgtt 227 |||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgtt 91
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 170 bits (86), Expect = 1e-39 Identities = 179/206 (86%), Gaps = 3/206 (1%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| |||||| Sbjct: 69 aaatgcttcggggagttaaaaataaacatagatccggagattcccgaataggtaaacctt 128 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 | ||||||| |||| | |||||| |||| ||| ||| ||||||| |||||||| |||||| Sbjct: 129 taaaactgc-tgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatctt 185 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 ||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| |||| Sbjct: 186 agtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaagggaa 245 Query: 181 cagcctaaaccgtgaaaacggggttg 206 |||||||||||| |||| ||||||| Sbjct: 246 cagcctaaaccgctaaaatggggttg 271
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 170 bits (86), Expect = 1e-39 Identities = 86/86 (100%) Strand = Plus / Plus Query: 142 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 202 ggttgtgggagagcaatacaagcgtt 227 |||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgtt 86
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 168 bits (85), Expect = 5e-39 Identities = 143/161 (88%), Gaps = 1/161 (0%) Strand = Plus / Plus Query: 31 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 90 ||||||||||| ||| |||||| ||||| |||||||| |||||||| || |||| | Sbjct: 56 gatccggagatccccgaatagggtaacctaataaactgc-tgctgaatatataggcagac 114 Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115 gagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 174 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 ||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 175 ttccctcagtagtggcgagcgaaatgggaacagcctaaacc 215
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 167 bits (84), Expect = 2e-38 Identities = 142/160 (88%), Gaps = 1/160 (0%) Strand = Plus / Plus Query: 34 ccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaag 93 |||||||||||| |||||| |||||| | ||||||| |||||||| ||| || | ||| Sbjct: 505 ccggagattcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaag 563 Query: 94 agacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattc 153 ||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 564 agacaacctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattc 623 Query: 154 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 193 || |||||| ||||||||||| |||| ||||||||||||| Sbjct: 624 ccttagtagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 165 bits (83), Expect = 7e-38 Identities = 179/211 (84%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| || || ||||||| ||||| |||||||| |||||| ||||| Sbjct: 71 aaatgcttcggggagctgcgaacaagcataaatccgaagattcccgaatagggtaacctc 130 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||| |||| |||| || | |||| ||||| ||||| | ||||||||||||||| Sbjct: 131 ttgtactacctgtagaattaataatcaggttagagaaaacctagtgaactgaaacatctt 190 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||| |||||||||||||||||||||||||||| ||||| ||||||||||| |||| Sbjct: 191 agtagctagaggaaaagaaagcaaaagcgattccctcagtagtggcgagcgaaacgggaa 250 Query: 181 cagcctaaaccgtgaaaacggggttgtggga 211 |||||||||||| |||| ||||||||||||| Sbjct: 251 cagcctaaaccgcgaaagcggggttgtggga 281
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 161 bits (81), Expect = 1e-36 Identities = 180/213 (84%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 |||||||| |||||| || || ||| ||||||||| |||||||| |||||| |||||| Sbjct: 3105 aaatgctttggggagctgcgaacaagtatagatccgaagattcccgaatagggcaacctc 3164 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||| |||| ||| ||| |||| ||||| ||||| | ||||||||||||||| Sbjct: 3165 ttgtactacctgtaaaatacatagtcaggttagagaaaacctagtgaactgaaacatctt 3224 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||| ||||||| | |||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 3225 agtagctagaggaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaa 3284 Query: 181 cagcctaaaccgtgaaaacggggttgtgggaga 213 ||||||||||||||||| ||||||||||||||| Sbjct: 3285 cagcctaaaccgtgaaagcggggttgtgggaga 3317
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 159 bits (80), Expect = 5e-36 Identities = 166/192 (86%), Gaps = 2/192 (1%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagc-atagatccggagattcccaaataggtcaacct 59 ||||||||||||||| || ||| |||| ||| |||||||||||||| |||||| |||||| Sbjct: 58 aaatgcttcggggagctggaaacaagctata-atccggagattcccgaatagggcaacct 116 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || ||| ||| ||||| ||| ||| ||||||||||| || ||| |||||||||| Sbjct: 117 cttgtactacctattgaattcatagataggaaagagacaacccggtgaattgaaacatct 176 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 |||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 177 tagtagccggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatggga 236 Query: 180 gcagcctaaacc 191 ||||||||||| Sbjct: 237 acagcctaaacc 248
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 159 bits (80), Expect = 5e-36 Identities = 98/104 (94%) Strand = Plus / Plus Query: 89 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 148 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 149 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 42.1 bits (21), Expect = 0.73 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagat 41 |||||||||||||||||| ||| | || |||||||||||| Sbjct: 71 aaatgcttcggggagttggaaagaggctgagatccggagat 111
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 157 bits (79), Expect = 2e-35 Identities = 118/131 (90%) Strand = Plus / Plus Query: 5 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 64 ||||||||||| |||||| |||||| ||||||||||||||| |||||| |||||| || | Sbjct: 776 gcttcggggagctgaaaagaagcattgatccggagattcccgaatagggcaacctcttga 835 Query: 65 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 124 ||| |||||||||| ||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 836 acttcctgctgaattcataggcaggatagagacaacctggcgaactgaaacatcttagta 895 Query: 125 gccagaggaaa 135 ||||||||||| Sbjct: 896 gccagaggaaa 906
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 155 bits (78), Expect = 7e-35 Identities = 161/186 (86%), Gaps = 2/186 (1%) Strand = Plus / Plus Query: 5 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct-ttta 63 |||||||||||| ||||| | | ||||||||||||||||| ||| || |||| ||| Sbjct: 75 gcttcggggagtcgaaaacagacgtagatccggagattcccgaatggggtaacccctttg 134 Query: 64 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 123 |||||| ||||||| ||| ||| | |||||||||||||| |||||||||||||||||| Sbjct: 135 tactgcc-gctgaattcataagcggataagagacaacctggtgaactgaaacatcttagt 193 Query: 124 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 183 | ||||||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct: 194 aaccagaggaaaagaaagcaaaagcgatttcctgagtagcggcgagcgaaatgggagaag 253 Query: 184 cctaaa 189 |||||| Sbjct: 254 cctaaa 259
>dbj|AK111146.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-E08, full insert sequence Length = 953 Score = 155 bits (78), Expect = 7e-35 Identities = 78/78 (100%) Strand = Plus / Plus Query: 145 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 62 Query: 205 tgtgggagagcaatacaa 222 |||||||||||||||||| Sbjct: 63 tgtgggagagcaatacaa 80
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 155 bits (78), Expect = 7e-35 Identities = 90/94 (95%) Strand = Plus / Plus Query: 98 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 157 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| | Sbjct: 1911 aacctggcgaactgaaacatcttagtaaccagaggaaaataaagcaaaagcgattccctt 1970 Query: 158 agtagcggcgagcgaaatgggagcagcctaaacc 191 |||||||||||||||||||||| ||||||||||| Sbjct: 1971 agtagcggcgagcgaaatgggaacagcctaaacc 2004
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 153 bits (77), Expect = 3e-34 Identities = 165/189 (87%), Gaps = 4/189 (2%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacct 59 ||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 69 aaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacct 128 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || ||||||| |||| | |||||| | || ||||||| |||| ||||||||||||||||| Sbjct: 129 ttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatct 185 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| |||| Sbjct: 186 tagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggga 245 Query: 180 gcagcctaa 188 || ||||| Sbjct: 246 acaacctaa 254
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 151 bits (76), Expect = 1e-33 Identities = 79/80 (98%) Strand = Plus / Plus Query: 147 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 206 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 207 tgggagagcaatacaagcgt 226 |||||||||||||||||||| Sbjct: 61 tgggagagcaatacaagcgt 80
>gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 4173 Score = 151 bits (76), Expect = 1e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 ||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 147 agagaaaacctggtgaactgaaacatctcagtagccagaggaaaagaaagcaaaagcgat 206 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 ||||||||||||||||||||||| ||| ||||||||||| Sbjct: 207 tcccgtagtagcggcgagcgaaacggggccagcctaaacc 246
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 151 bits (76), Expect = 1e-33 Identities = 160/188 (85%) Strand = Plus / Plus Query: 5 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 64 ||||||||||| || || |||| | |||||| |||||||| |||||| ||||||| || Sbjct: 62 gcttcggggagctggaatcaagctttgatccgaagattcccgaatagggcaaccttatat 121 Query: 65 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 124 ||| |||| ||||| ||| |||| ||||||||||| |||||| ||||||||||||||| Sbjct: 122 acttcctgttgaattcatagacaggtaagagacaacccggcgaattgaaacatcttagta 181 Query: 125 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 184 ||| | ||||||||||||||| ||||||||| |||||| ||||||||||| |||| ||| Sbjct: 182 gccggtggaaaagaaagcaaacgcgattcccttagtagtggcgagcgaaaagggatcagt 241 Query: 185 ctaaaccg 192 |||||||| Sbjct: 242 ctaaaccg 249
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 151 bits (76), Expect = 1e-33 Identities = 145/168 (86%) Strand = Plus / Plus Query: 24 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 83 |||||| ||||||||||| ||| |||||| |||||| || |||| | ||||||| || Sbjct: 81 aagcattgatccggagatccccgaatagggcaacctcttgaactctccgctgaataaata 140 Query: 84 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 143 || | ||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 141 ggcggagcagagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagca 200 Query: 144 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 |||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 201 aaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 151 bits (76), Expect = 1e-33 Identities = 145/168 (86%) Strand = Plus / Minus Query: 24 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 83 |||||| ||||||||||| ||| |||||| |||||| || |||| | ||||||| || Sbjct: 115582 aagcattgatccggagatccccgaatagggcaacctcttgaactctccgctgaataaata 115523 Query: 84 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 143 || | ||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 115522 ggcggagcagagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagca 115463 Query: 144 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 |||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115462 aaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 151 bits (76), Expect = 1e-33 Identities = 145/168 (86%) Strand = Plus / Plus Query: 24 aagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatg 83 |||||| ||||||||||| ||| |||||| |||||| || |||| | ||||||| || Sbjct: 86406 aagcattgatccggagatccccgaatagggcaacctcttgaactctccgctgaataaata 86465 Query: 84 agcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 143 || | ||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 86466 ggcggagcagagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagca 86525 Query: 144 aaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 |||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86526 aaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 147 bits (74), Expect = 2e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 145 bits (73), Expect = 7e-32 Identities = 94/101 (93%) Strand = Plus / Minus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 7e-32 Identities = 94/101 (93%) Strand = Plus / Plus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 42.1 bits (21), Expect = 0.73 Identities = 51/61 (83%) Strand = Plus / Minus Query: 5 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 64 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 156227 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 156168 Query: 65 a 65 | Sbjct: 156167 a 156167 Score = 42.1 bits (21), Expect = 0.73 Identities = 51/61 (83%) Strand = Plus / Plus Query: 5 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 64 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 77665 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 77724 Query: 65 a 65 | Sbjct: 77725 a 77725
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 145 bits (73), Expect = 7e-32 Identities = 164/189 (86%), Gaps = 4/189 (2%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacct 59 ||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 69 aaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacct 128 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||||| Sbjct: 129 ttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatct 185 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| |||| Sbjct: 186 tagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggga 245 Query: 180 gcagcctaa 188 || ||||| Sbjct: 246 acaacctaa 254
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 145 bits (73), Expect = 7e-32 Identities = 164/189 (86%), Gaps = 4/189 (2%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacct 59 ||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 69 aaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacct 128 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||||| Sbjct: 129 ttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatct 185 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| |||| Sbjct: 186 tagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggga 245 Query: 180 gcagcctaa 188 || ||||| Sbjct: 246 acaacctaa 254
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 164/189 (86%), Gaps = 4/189 (2%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacct 59 ||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 69 aaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacct 128 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||||| Sbjct: 129 ttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatct 185 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| |||| Sbjct: 186 tagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggga 245 Query: 180 gcagcctaa 188 || ||||| Sbjct: 246 acaacctaa 254
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 164/189 (86%), Gaps = 4/189 (2%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacct 59 ||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 69 aaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacct 128 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||||| Sbjct: 129 ttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatct 185 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| |||| Sbjct: 186 tagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggga 245 Query: 180 gcagcctaa 188 || ||||| Sbjct: 246 acaacctaa 254
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 164/189 (86%), Gaps = 4/189 (2%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacct 59 ||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 69 aaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacct 128 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||||| Sbjct: 129 ttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatct 185 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| |||| Sbjct: 186 tagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggga 245 Query: 180 gcagcctaa 188 || ||||| Sbjct: 246 acaacctaa 254
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 158/181 (87%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacct 59 ||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 69 aaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacct 128 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||||| Sbjct: 129 ttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatct 185 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| |||| Sbjct: 186 tagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggga 245 Query: 180 g 180 | Sbjct: 246 g 246
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 158/181 (87%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacct 59 ||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 69 aaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacct 128 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||||| Sbjct: 129 ttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatct 185 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| |||| Sbjct: 186 tagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggga 245 Query: 180 g 180 | Sbjct: 246 g 246
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 145 bits (73), Expect = 7e-32 Identities = 164/189 (86%), Gaps = 4/189 (2%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacct 59 ||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 69 aaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacct 128 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||||| Sbjct: 129 ttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatct 185 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| |||| Sbjct: 186 tagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggga 245 Query: 180 gcagcctaa 188 || ||||| Sbjct: 246 acaacctaa 254
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 164/189 (86%), Gaps = 4/189 (2%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacct 59 ||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 69 aaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacct 128 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||||| Sbjct: 129 ttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatct 185 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| |||| Sbjct: 186 tagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggga 245 Query: 180 gcagcctaa 188 || ||||| Sbjct: 246 acaacctaa 254
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 164/189 (86%), Gaps = 4/189 (2%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacct 59 ||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 69 aaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacct 128 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||||| Sbjct: 129 ttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatct 185 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| |||| Sbjct: 186 tagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggga 245 Query: 180 gcagcctaa 188 || ||||| Sbjct: 246 acaacctaa 254
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 145 bits (73), Expect = 7e-32 Identities = 164/189 (86%), Gaps = 4/189 (2%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacct 59 ||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 69 aaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacct 128 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||||| Sbjct: 129 ttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatct 185 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| |||| Sbjct: 186 tagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggga 245 Query: 180 gcagcctaa 188 || ||||| Sbjct: 246 acaacctaa 254
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 164/189 (86%), Gaps = 4/189 (2%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacct 59 ||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 69 aaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacct 128 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||||| Sbjct: 129 ttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatct 185 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| |||| Sbjct: 186 tagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggga 245 Query: 180 gcagcctaa 188 || ||||| Sbjct: 246 acaacctaa 254
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 164/189 (86%), Gaps = 4/189 (2%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacct 59 ||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 69 aaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacct 128 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||||| Sbjct: 129 ttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatct 185 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| |||| Sbjct: 186 tagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggga 245 Query: 180 gcagcctaa 188 || ||||| Sbjct: 246 acaacctaa 254
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 145 bits (73), Expect = 7e-32 Identities = 164/189 (86%), Gaps = 4/189 (2%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacct 59 ||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 69 aaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacct 128 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||||| Sbjct: 129 ttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatct 185 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| |||| Sbjct: 186 tagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggga 245 Query: 180 gcagcctaa 188 || ||||| Sbjct: 246 acaacctaa 254
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 145 bits (73), Expect = 7e-32 Identities = 164/189 (86%), Gaps = 4/189 (2%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacct 59 ||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 69 aaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacct 128 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||||| Sbjct: 129 ttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatct 185 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| |||| Sbjct: 186 tagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggga 245 Query: 180 gcagcctaa 188 || ||||| Sbjct: 246 acaacctaa 254
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 145 bits (73), Expect = 7e-32 Identities = 97/105 (92%) Strand = Plus / Plus Query: 87 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 146 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 147 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 145 bits (73), Expect = 7e-32 Identities = 88/93 (94%) Strand = Plus / Plus Query: 98 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 157 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 188152 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 188211 Query: 158 agtagcggcgagcgaaatgggagcagcctaaac 190 |||||||||||||||| |||| |||||||||| Sbjct: 188212 agtagcggcgagcgaagcgggaacagcctaaac 188244 Score = 145 bits (73), Expect = 7e-32 Identities = 88/93 (94%) Strand = Plus / Plus Query: 98 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 157 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 149709 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 149768 Query: 158 agtagcggcgagcgaaatgggagcagcctaaac 190 |||||||||||||||| |||| |||||||||| Sbjct: 149769 agtagcggcgagcgaagcgggaacagcctaaac 149801
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 145 bits (73), Expect = 7e-32 Identities = 88/93 (94%) Strand = Plus / Plus Query: 98 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 157 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 189075 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 189134 Query: 158 agtagcggcgagcgaaatgggagcagcctaaac 190 |||||||||||||||| |||| |||||||||| Sbjct: 189135 agtagcggcgagcgaagcgggaacagcctaaac 189167 Score = 145 bits (73), Expect = 7e-32 Identities = 88/93 (94%) Strand = Plus / Plus Query: 98 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 157 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 150502 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctt 150561 Query: 158 agtagcggcgagcgaaatgggagcagcctaaac 190 |||||||||||||||| |||| |||||||||| Sbjct: 150562 agtagcggcgagcgaagcgggaacagcctaaac 150594
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 143 bits (72), Expect = 3e-31 Identities = 178/207 (85%), Gaps = 6/207 (2%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacct 59 |||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||| ||||| Sbjct: 69 aaatgctttggggagttaaaaaataaacatagatccggagattcccgaataggtaaacct 128 Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 || |||||| |||| | |||||| |||| ||||||| ||||||| |||||||||||||| Sbjct: 129 tt--aactgc-tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatct 183 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||||||||||||||||| |||||||||| |||||| |||||| ||| | |||| |||| Sbjct: 184 tagtagccagaggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaaggga 243 Query: 180 gcagcctaaaccgtgaaaacggggttg 206 ||||||||| || |||| ||||||| Sbjct: 244 acagcctaaatcgctaaaatggggttg 270
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 143 bits (72), Expect = 3e-31 Identities = 159/188 (84%) Strand = Plus / Plus Query: 5 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 64 |||||| |||| || ||| ||||| ||| ||||||||||| |||||| |||||| || Sbjct: 55 gcttcgaggagctggaaacaagcaatgattcggagattcccgaatagggcaacctcttgt 114 Query: 65 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 124 ||| ||| ||||| ||| ||| ||||||||||| || ||| ||||||||||||||| Sbjct: 115 acttccttttgaattcatagaaaggaaagagacaacccggtgaattgaaacatcttagta 174 Query: 125 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 184 ||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||| Sbjct: 175 gccggaggaaaagaaagcaaacgcgattcccgtagtagcggcgagcgaactgggaacagt 234 Query: 185 ctaaaccg 192 |||||||| Sbjct: 235 ctaaaccg 242
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 143 bits (72), Expect = 3e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 98 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 157 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 148 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaacgcgattccctt 207 Query: 158 agtagcggcgagcgaaatgggagcagcctaaa 189 ||||||||||||||||| |||| ||||||||| Sbjct: 208 agtagcggcgagcgaaacgggaacagcctaaa 239 Score = 44.1 bits (22), Expect = 0.19 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 58 ||||||||||||||| || ||| |||| ||||||||||||||| ||| || ||||| Sbjct: 51 aaatgcttcggggagctggaaacaagctacgatccggagattcccgaatggggcaacc 108
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 143 bits (72), Expect = 3e-31 Identities = 156/184 (84%) Strand = Plus / Plus Query: 9 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 68 ||||||| || || ||||| | ||||||||||||||| ||| || |||||| ||| Sbjct: 66 cggggagctggaagtaagcttcgatccggagattcccgaatggggcaacctcaaggactc 125 Query: 69 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 128 |||||||||| ||| ||||| |||| |||| || |||||||||||||||||||||| Sbjct: 126 cctgctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccg 185 Query: 129 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 188 ||||||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||| Sbjct: 186 gaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaa 245 Query: 189 accg 192 |||| Sbjct: 246 accg 249
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 143 bits (72), Expect = 3e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 98 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 157 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct: 2029 aacctggcgaattgaaacatcttagtagccagaggaaaagaaagcaaacgcgattccctt 2088 Query: 158 agtagcggcgagcgaaatgggagcagcctaaa 189 ||||||||||||||||| |||| ||||||||| Sbjct: 2089 agtagcggcgagcgaaacgggaacagcctaaa 2120 Score = 44.1 bits (22), Expect = 0.19 Identities = 49/58 (84%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 58 ||||||||||||||| || ||| |||| ||||||||||||||| ||| || ||||| Sbjct: 1932 aaatgcttcggggagctggaaacaagctacgatccggagattcccgaatggggcaacc 1989
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 141 bits (71), Expect = 1e-30 Identities = 158/187 (84%) Strand = Plus / Plus Query: 5 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 64 ||||||||||| || ||||||| | |||||| |||| ||| |||||| |||||| | Sbjct: 54 gcttcggggagctggcaataagcgttgatccgaagatccccgaatagggcaacctcaaga 113 Query: 65 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 124 ||| ||| | ||| ||| || |||||||||| |||| || |||||||||||||| |||| Sbjct: 114 actacctccctaattcataaggaggcaagagagaacccggtgaactgaaacatctaagta 173 Query: 125 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 184 ||| ||||||||||||||||| ||||||||| |||||||||||||||||| |||| |||| Sbjct: 174 gccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaagggaacagc 233 Query: 185 ctaaacc 191 ||||||| Sbjct: 234 ctaaacc 240
>gb|AY155547.1| Cyanothece sp. PCC 8801 23S ribosomal RNA gene, partial sequence Length = 732 Score = 141 bits (71), Expect = 1e-30 Identities = 89/95 (93%) Strand = Plus / Plus Query: 97 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 156 ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 167 caaccgggcgaactgaaacatcttagtagcccgaggaaaagaaagcaaaagcgattcccc 226 Query: 157 tagtagcggcgagcgaaatgggagcagcctaaacc 191 ||||||||||||||||| |||| ||||||||||| Sbjct: 227 cagtagcggcgagcgaaaagggaacagcctaaacc 261
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 141 bits (71), Expect = 1e-30 Identities = 176/211 (83%) Strand = Plus / Plus Query: 1 aaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacctt 60 ||||||||||||||| || || ||| ||| ||||| |||||||| |||||| ||||| Sbjct: 1838 aaatgcttcggggagctgcgaacaagtataaatccgaagattcccgaatagggtaacctc 1897 Query: 61 ttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatctt 120 || ||| |||| |||| || | |||| ||||| ||||| | ||||||||||||||| Sbjct: 1898 ttgtactacctgtataatcaataatcaggttagagaaaacctagtgaactgaaacatctt 1957 Query: 121 agtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 180 |||||| ||||||| | |||||||||||||||||| |||||| ||||||||||| |||| Sbjct: 1958 agtagctagaggaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaa 2017 Query: 181 cagcctaaaccgtgaaaacggggttgtggga 211 | ||||||||||| ||| ||||||||||||| Sbjct: 2018 ccgcctaaaccgttaaagcggggttgtggga 2048
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 139 bits (70), Expect = 4e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 98 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 157 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1692 aacctggtgaactgaaacatcttagtagccagaggaaaagaaagcaacagcgattccccc 1751 Query: 158 agtagcggcgagcgaaatgggagcagcctaaacc 191 ||||||||||||||||| |||| ||||||||||| Sbjct: 1752 agtagcggcgagcgaaaagggaacagcctaaacc 1785
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 139 bits (70), Expect = 4e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 139 bits (70), Expect = 4e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 139 bits (70), Expect = 4e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 98 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 157 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 158 agtagcggcgagcgaaatgggagcagcctaaacc 191 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 139 bits (70), Expect = 4e-30 Identities = 88/94 (93%) Strand = Plus / Minus Query: 98 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 157 |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 2334657 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagaaaactcgattccctt 2334598 Query: 158 agtagcggcgagcgaaatgggagcagcctaaacc 191 ||||||||||||||||| |||| ||||||||||| Sbjct: 2334597 agtagcggcgagcgaaaggggaacagcctaaacc 2334564
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 139 bits (70), Expect = 4e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 98 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 157 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | | Sbjct: 1718 aacctagcgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattctctt 1777 Query: 158 agtagcggcgagcgaaatgggagcagcctaaacc 191 ||||||||||||||||| |||| ||||||||||| Sbjct: 1778 agtagcggcgagcgaaaagggaacagcctaaacc 1811
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 135 bits (68), Expect = 7e-29 Identities = 89/96 (92%) Strand = Plus / Plus Query: 97 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 156 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 157 tagtagcggcgagcgaaatgggagcagcctaaaccg 192 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 135 bits (68), Expect = 7e-29 Identities = 89/96 (92%) Strand = Plus / Plus Query: 97 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 156 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 222 Query: 157 tagtagcggcgagcgaaatgggagcagcctaaaccg 192 |||||||||||||||| |||| |||||||||||| Sbjct: 223 cagtagcggcgagcgaagagggaacagcctaaaccg 258
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 135 bits (68), Expect = 7e-29 Identities = 89/96 (92%) Strand = Plus / Plus Query: 97 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 156 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 4737 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 4796 Query: 157 tagtagcggcgagcgaaatgggagcagcctaaaccg 192 |||||||||||||||| |||| |||||||||||| Sbjct: 4797 cagtagcggcgagcgaagagggaacagcctaaaccg 4832
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 133 bits (67), Expect = 3e-28 Identities = 157/187 (83%) Strand = Plus / Plus Query: 5 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 64 ||||||||||| || || |||| | |||||| |||||||| |||||| |||||| |||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccgaatagggcaacctattaa 132 Query: 65 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 124 ||| ||| ||| ||| ||| |||||| |||| | |||||||||||||| |||| Sbjct: 133 acttcctatacaattcatatttaggaaagagagaacccagtgaactgaaacatctaagta 192 Query: 125 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 184 || ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 193 gctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaactgggatcagc 252 Query: 185 ctaaacc 191 ||||||| Sbjct: 253 ctaaacc 259
>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1 Length = 2219 Score = 133 bits (67), Expect = 3e-28 Identities = 157/187 (83%) Strand = Plus / Plus Query: 5 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 64 ||||||||||| || || |||| | |||||| |||||||| |||||| |||||| |||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccgaatagggcaacctattaa 132 Query: 65 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 124 ||| ||| ||| ||| ||| |||||| |||| | |||||||||||||| |||| Sbjct: 133 acttcctatacaattcatatttaggaaagagagaacccagtgaactgaaacatctaagta 192 Query: 125 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 184 || ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 193 gctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaactgggatcagc 252 Query: 185 ctaaacc 191 ||||||| Sbjct: 253 ctaaacc 259
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 131 bits (66), Expect = 1e-27 Identities = 109/122 (89%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 85 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 144 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 145 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 204 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 205 tg 206 || Sbjct: 268 tg 269
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 131 bits (66), Expect = 1e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 110 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 169 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 170 cgaaatgggagcagcctaaacc 191 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 131 bits (66), Expect = 1e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 |||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 151 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 129 bits (65), Expect = 4e-27 Identities = 83/89 (93%) Strand = Plus / Plus Query: 91 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 150 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 151 ttcccgtagtagcggcgagcgaaatggga 179 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 127 bits (64), Expect = 2e-26 Identities = 115/132 (87%) Strand = Plus / Minus Query: 60 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 119 |||| ||| ||| |||||| ||| || ||||||||| ||| |||||||||||||||||| Sbjct: 27704 tttatactacctactgaattcataagtaggcaagagctaacttggcgaactgaaacatct 27645 Query: 120 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 179 ||||||||| |||||||||||||||| ||||||| | |||||| ||||| ||||| |||| Sbjct: 27644 tagtagccaaaggaaaagaaagcaaacgcgattctcttagtagtggcgaacgaaaaggga 27585 Query: 180 gcagcctaaacc 191 ||||||||||| Sbjct: 27584 acagcctaaacc 27573
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 127 bits (64), Expect = 2e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 104 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 163 ||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||||| Sbjct: 161 gcgaattgaaacatcttagtagctggaggaaaaaaaagcaaaagcgattcccttagtagc 220 Query: 164 ggcgagcgaaatgggagcagcctaaacc 191 |||||||||||||||| ||||||||||| Sbjct: 221 ggcgagcgaaatgggaacagcctaaacc 248
>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3875 Score = 127 bits (64), Expect = 2e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 98 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 157 ||||||| ||| ||||||||||||||| |||||||||||||||||||| ||||||||| | Sbjct: 149 aacctggtgaattgaaacatcttagtaaccagaggaaaagaaagcaaacgcgattccctt 208 Query: 158 agtagcggcgagcgaaatgggagcagcctaaa 189 ||||||||||||||||| |||| ||||||||| Sbjct: 209 agtagcggcgagcgaaacgggaacagcctaaa 240
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 127 bits (64), Expect = 2e-26 Identities = 112/128 (87%) Strand = Plus / Minus Query: 88 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 147 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 139114 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 139055 Query: 148 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 207 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 139054 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 138995 Query: 208 gggagagc 215 |||||||| Sbjct: 138994 gggagagc 138987 Score = 127 bits (64), Expect = 2e-26 Identities = 112/128 (87%) Strand = Plus / Plus Query: 88 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 147 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 82763 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 82822 Query: 148 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 207 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 82823 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 82882 Query: 208 gggagagc 215 |||||||| Sbjct: 82883 gggagagc 82890
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 127 bits (64), Expect = 2e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 258
>gb|DQ313018.1| Uncultured bacterium clone 3P12F 23S ribosomal RNA gene, partial sequence Length = 798 Score = 127 bits (64), Expect = 2e-26 Identities = 79/84 (94%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 8 gaactgaaacatcttagtagccaaaggaaaagaaagcaaaagcgattcccaaagtagcgg 67 Query: 166 cgagcgaaatgggagcagcctaaa 189 |||||| ||||||| ||||||||| Sbjct: 68 cgagcggaatgggaacagcctaaa 91
>gb|DQ312920.1| Uncultured bacterium clone 3M10C 23S ribosomal RNA gene, partial sequence Length = 798 Score = 127 bits (64), Expect = 2e-26 Identities = 79/84 (94%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 8 gaactgaaacatcttagtagccaaaggaaaagaaagcaaaagcgattcccaaagtagcgg 67 Query: 166 cgagcgaaatgggagcagcctaaa 189 |||||| ||||||| ||||||||| Sbjct: 68 cgagcggaatgggaacagcctaaa 91
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 127 bits (64), Expect = 2e-26 Identities = 82/88 (93%) Strand = Plus / Plus Query: 104 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 163 ||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||||| Sbjct: 1898 gcgaattgaaacatcttagtagctggaggaaaaaaaagcaaaagcgattcccttagtagc 1957 Query: 164 ggcgagcgaaatgggagcagcctaaacc 191 |||||||||||||||| ||||||||||| Sbjct: 1958 ggcgagcgaaatgggaacagcctaaacc 1985
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 127 bits (64), Expect = 2e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 258
>gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, complete genome Length = 149705 Score = 125 bits (63), Expect = 6e-26 Identities = 88/95 (92%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 98 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc-g 156 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 45899 aacctagcgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattcccac 45840 Query: 157 tagtagcggcgagcgaaatgggagcagcctaaacc 191 |||||| ||||||||||| |||| ||||||||||| Sbjct: 45839 tagtagtggcgagcgaaaggggaacagcctaaacc 45805
>dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D Length = 149987 Score = 125 bits (63), Expect = 6e-26 Identities = 88/95 (92%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 98 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc-g 156 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 19480 aacctagcgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattcccac 19539 Query: 157 tagtagcggcgagcgaaatgggagcagcctaaacc 191 |||||| ||||||||||| |||| ||||||||||| Sbjct: 19540 tagtagtggcgagcgaaaggggaacagcctaaacc 19574
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 125 bits (63), Expect = 6e-26 Identities = 63/63 (100%) Strand = Plus / Plus Query: 86 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43316 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 43375 Query: 146 agc 148 ||| Sbjct: 43376 agc 43378 Score = 107 bits (54), Expect = 1e-20 Identities = 57/58 (98%) Strand = Plus / Plus Query: 86 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 143 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40844 caggcaagagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagca 40901 Score = 63.9 bits (32), Expect = 2e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 32 atccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggca 91 |||||||||||||| ||||||||||||||| |||| |||||||||||||| ||||||| Sbjct: 63009 atccggagattcccgaataggtcaacctttcgaact-actgctgaatccatgggcaggca 62951
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 123 bits (62), Expect = 3e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 98 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 157 ||||||| || |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1691 aacctggtgagctgaaacatcttagtagccagaggaaaagaaagcaacagcgattccccc 1750 Query: 158 agtagcggcgagcgaaatgggagcagcctaaacc 191 |||||||||||||||| |||| ||||||||||| Sbjct: 1751 cgtagcggcgagcgaaaagggaacagcctaaacc 1784
>gb|AE012979.1| Thermoanaerobacter tengcongensis MB4, section 6 of 244 of the complete genome Length = 12243 Score = 123 bits (62), Expect = 3e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 98 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 157 |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 9145 aaccgggcgaactgaaacatctaagtagcccgaggaaaagaaagcaaaagcgattcccta 9204 Query: 158 agtagcggcgagcgaaatgggagcagcctaaacc 191 ||||||||||||||||| ||||| |||| ||||| Sbjct: 9205 agtagcggcgagcgaaaggggagaagcccaaacc 9238
>gb|AE012982.1| Thermoanaerobacter tengcongensis MB4, section 9 of 244 of the complete genome Length = 6166 Score = 123 bits (62), Expect = 3e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 98 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 157 |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 1954 aaccgggcgaactgaaacatctaagtagcccgaggaaaagaaagcaaaagcgattcccta 2013 Query: 158 agtagcggcgagcgaaatgggagcagcctaaacc 191 ||||||||||||||||| ||||| |||| ||||| Sbjct: 2014 agtagcggcgagcgaaaggggagaagcccaaacc 2047
>gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5001 Score = 123 bits (62), Expect = 3e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||||||||| | ||| ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 149 agagacaaccgagtgaattgaaacatcttagtagctcgaggaagagaaagcaaaagcgat 208 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaa 189 ||||| |||||||||||||||||||||| ||||||||| Sbjct: 209 tcccggagtagcggcgagcgaaatgggaacagcctaaa 246
>gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit ribosomal RNA gene, partial sequence; and putative protein genes, complete cds; chloroplast Length = 6151 Score = 123 bits (62), Expect = 3e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||||||||| | ||| ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 149 agagacaaccgagtgaattgaaacatcttagtagctcgaggaagagaaagcaaaagcgat 208 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaa 189 ||||| |||||||||||||||||||||| ||||||||| Sbjct: 209 tcccggagtagcggcgagcgaaatgggaacagcctaaa 246
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 123 bits (62), Expect = 3e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 110 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 169 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 170 cgaaatgggagcagcctaaacc 191 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 123 bits (62), Expect = 3e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 110 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 169 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 170 cgaaatgggagcagcctaaacc 191 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 123 bits (62), Expect = 3e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 97 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 156 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 157 tagtagcggcgagcgaaatgggagcagcctaaac 190 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 123 bits (62), Expect = 3e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||| Sbjct: 1860 gaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgatttccttagtagcgg 1919 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||| ||| | ||||||||||| Sbjct: 1920 cgagcgaactggaatcagcctaaacc 1945
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 121 bits (61), Expect = 1e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 1e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 42.1 bits (21), Expect = 0.73 Identities = 27/29 (93%) Strand = Plus / Minus Query: 31 gatccggagattcccaaataggtcaacct 59 ||||||||||||||| |||||| |||||| Sbjct: 171418 gatccggagattcccgaatagggcaacct 171390 Score = 42.1 bits (21), Expect = 0.73 Identities = 27/29 (93%) Strand = Plus / Plus Query: 31 gatccggagattcccaaataggtcaacct 59 ||||||||||||||| |||||| |||||| Sbjct: 121508 gatccggagattcccgaatagggcaacct 121536
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 121 bits (61), Expect = 1e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 ||||||||||||||||||| | |||||||||||||| |||| |||||||| ||||||||| Sbjct: 1909 gaactgaaacatcttagtacctagaggaaaagaaagtaaaaacgattcccttagtagcgg 1968 Query: 166 cgagcgaaatgggagcagcctaaac 190 |||||||||||||| |||||||||| Sbjct: 1969 cgagcgaaatgggaacagcctaaac 1993
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 121 bits (61), Expect = 1e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 46.1 bits (23), Expect = 0.047 Identities = 47/55 (85%) Strand = Plus / Plus Query: 5 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 59 ||||||||||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 62 gcttcggggagctggaaacaagctttgatccgtagattcccgaatagggcaacct 116
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 121 bits (61), Expect = 1e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 42.1 bits (21), Expect = 0.73 Identities = 27/29 (93%) Strand = Plus / Plus Query: 31 gatccggagattcccaaataggtcaacct 59 ||||||||||||||| |||||| |||||| Sbjct: 99 gatccggagattcccgaatagggcaacct 127
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 121 bits (61), Expect = 1e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 192 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 46.1 bits (23), Expect = 0.047 Identities = 47/55 (85%) Strand = Plus / Plus Query: 5 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 59 ||||||||||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 1828 gcttcggggagctggaaacaagctttgatccgtagattcccgaatagggcaacct 1882
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 119 bits (60), Expect = 4e-24 Identities = 156/188 (82%) Strand = Plus / Plus Query: 5 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 64 |||||||||||||| ||| | || | |||||| |||| ||| ||| || ||||| ||||| Sbjct: 136548 gcttcggggagttggaaacacgctttgatccgaagatacccgaatggggcaaccctttaa 136607 Query: 65 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 124 ||| || |||||| ||| | ||||||| |||| | ||||||||||||||||||| Sbjct: 136608 actaccgactgaattcataggtcggcaagaagtaacccgctgaactgaaacatcttagta 136667 Query: 125 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 184 | ||||||||||||||||| ||||||||| ||||||||||||||||| ||||| |||| Sbjct: 136668 agcggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaagtgggaacagc 136727 Query: 185 ctaaaccg 192 |||||||| Sbjct: 136728 ctaaaccg 136735 Score = 119 bits (60), Expect = 4e-24 Identities = 156/188 (82%) Strand = Plus / Minus Query: 5 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 64 |||||||||||||| ||| | || | |||||| |||| ||| ||| || ||||| ||||| Sbjct: 48996 gcttcggggagttggaaacacgctttgatccgaagatacccgaatggggcaaccctttaa 48937 Query: 65 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 124 ||| || |||||| ||| | ||||||| |||| | ||||||||||||||||||| Sbjct: 48936 actaccgactgaattcataggtcggcaagaagtaacccgctgaactgaaacatcttagta 48877 Query: 125 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 184 | ||||||||||||||||| ||||||||| ||||||||||||||||| ||||| |||| Sbjct: 48876 agcggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaagtgggaacagc 48817 Query: 185 ctaaaccg 192 |||||||| Sbjct: 48816 ctaaaccg 48809
>gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4406 Score = 119 bits (60), Expect = 4e-24 Identities = 90/100 (90%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 |||||||||||||||||||||| |||| |||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggattagcctaaacc 258
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 119 bits (60), Expect = 4e-24 Identities = 90/100 (90%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>gb|L42847.1|MIQCPRGOL Micromonas pusilla large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2558 Score = 119 bits (60), Expect = 4e-24 Identities = 78/84 (92%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 ||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||| Sbjct: 156 gaactgaaacatcttagtagctaaaggaaaagaaagcaaaagcgattcccaaagtagcgg 215 Query: 166 cgagcgaaatgggagcagcctaaa 189 |||||| ||||||| ||||||||| Sbjct: 216 cgagcggaatgggaacagcctaaa 239
>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome Length = 164921 Score = 119 bits (60), Expect = 4e-24 Identities = 81/88 (92%) Strand = Plus / Minus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 ||||||||||||||||||| | |||||||||||||||||||||||||||| ||||| || Sbjct: 64524 gaactgaaacatcttagtaactagaggaaaagaaagcaaaagcgattcccccagtagtgg 64465 Query: 166 cgagcgaaatgggagcagcctaaaccgt 193 ||||||||| |||| ||||||||||||| Sbjct: 64464 cgagcgaaaagggaacagcctaaaccgt 64437
>emb|X68891.1|CHCGRRNL1 Chloroplast Chlamydomonas geitleri rrnL gene, exon 1 Length = 1964 Score = 119 bits (60), Expect = 4e-24 Identities = 90/100 (90%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||||||||| || ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 159 agagacaacccggtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 218 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 191 |||||||||||||||||||||| |||| |||||||||| Sbjct: 219 tcccgtagtagcggcgagcgaaccgggattagcctaaacc 258
>gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3403 Score = 115 bits (58), Expect = 6e-23 Identities = 88/98 (89%) Strand = Plus / Plus Query: 92 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 151 |||||||||| | |||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 141 agagacaacccagtgaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgat 200 Query: 152 tcccgtagtagcggcgagcgaaatgggagcagcctaaa 189 ||||||||||| |||||||||| |||| ||||||||| Sbjct: 201 tcccgtagtagtggcgagcgaaccgggaacagcctaaa 238
>gb|L43540.1|DUNCPRRNL Dunaliella parva Length = 5685 Score = 115 bits (58), Expect = 6e-23 Identities = 76/82 (92%) Strand = Plus / Plus Query: 110 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 169 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 219 Query: 170 cgaaatgggagcagcctaaacc 191 |||| |||| ||||||||||| Sbjct: 220 cgaaccgggaacagcctaaacc 241
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 115 bits (58), Expect = 6e-23 Identities = 79/86 (91%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 46.1 bits (23), Expect = 0.047 Identities = 47/55 (85%) Strand = Plus / Plus Query: 5 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 59 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 115 bits (58), Expect = 6e-23 Identities = 79/86 (91%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 46.1 bits (23), Expect = 0.047 Identities = 47/55 (85%) Strand = Plus / Plus Query: 5 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 59 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 115 bits (58), Expect = 6e-23 Identities = 79/86 (91%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large subunit ribosomal RNA (rrnL) gene Length = 2792 Score = 115 bits (58), Expect = 6e-23 Identities = 79/86 (91%) Strand = Plus / Plus Query: 106 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 165 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| || Sbjct: 156 gaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgattcccgtagtagtgg 215 Query: 166 cgagcgaaatgggagcagcctaaacc 191 |||||||| |||| ||||||||||| Sbjct: 216 cgagcgaaccgggaacagcctaaacc 241 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,064,476 Number of Sequences: 3902068 Number of extensions: 2064476 Number of successful extensions: 166138 Number of sequences better than 10.0: 4551 Number of HSP's better than 10.0 without gapping: 4457 Number of HSP's successfully gapped in prelim test: 113 Number of HSP's that attempted gapping in prelim test: 153610 Number of HSP's gapped (non-prelim): 12057 length of query: 227 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 205 effective length of database: 17,147,199,772 effective search space: 3515175953260 effective search space used: 3515175953260 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)