| Clone Name | basd22b04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 119254 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 119195 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119194 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119135 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119134 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119075 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119074 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 119015 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119014 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 118955 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118954 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118895 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118894 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 118835 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118834 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 118775 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118774 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 118715 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 118714 ggagcgttccg 118704 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 95902 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 95961 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95962 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 96021 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96022 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96081 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96082 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96141 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96142 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 96201 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96202 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 96261 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96262 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 96321 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96322 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 96381 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96382 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 96441 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 96442 ggagcgttccg 96452
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 119254 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 119195 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119194 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119135 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119134 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119075 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119074 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 119015 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119014 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 118955 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118954 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118895 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118894 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 118835 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118834 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 118775 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118774 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 118715 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 118714 ggagcgttccg 118704 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 95902 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 95961 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95962 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 96021 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96022 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96081 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96082 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96141 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96142 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 96201 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96202 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 96261 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96262 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 96321 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96322 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 96381 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96382 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 96441 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 96442 ggagcgttccg 96452
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 119203 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 119144 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119143 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119084 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119083 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119024 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119023 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 118964 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118963 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 118904 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118903 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118844 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118843 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 118784 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118783 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 118724 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118723 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 118664 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 118663 ggagcgttccg 118653 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 95847 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 95906 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95907 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 95966 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95967 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96026 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96027 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96086 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96087 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 96146 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96147 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 96206 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96207 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 96266 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96267 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 96326 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96327 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 96386 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 96387 ggagcgttccg 96397
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 31508480 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 31508539 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508540 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 31508599 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508600 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 31508659 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508660 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 31508719 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508720 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 31508779 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508780 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 31508839 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508840 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 31508899 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508900 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 31508959 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508960 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 31509019 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 31509020 ggagcgttccg 31509030 Score = 488 bits (246), Expect = e-134 Identities = 246/246 (100%) Strand = Plus / Minus Query: 306 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 366 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 426 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 486 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11513078 Query: 546 gttccg 551 |||||| Sbjct: 11513077 gttccg 11513072 Score = 285 bits (144), Expect = 8e-74 Identities = 144/144 (100%) Strand = Plus / Minus Query: 408 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 468 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 528 atgcatcggtaggggagcgttccg 551 |||||||||||||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgttccg 27320520 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 322 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 381 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 382 taaaggaggtggggg 396 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 325 gtcgagagggaaacagcccggatcaccagctaaggccc 362 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 224 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 278 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 84116 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 84057 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84056 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 83997 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83996 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 83937 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83936 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 83877 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83876 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 83817 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83816 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 83757 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83756 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 83697 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83696 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 83637 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83636 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 83577 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 83576 ggagcgttccg 83566
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 119223 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 119164 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119163 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119104 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119103 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119044 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119043 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 118984 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118983 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 118924 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118923 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118864 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118863 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 118804 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118803 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 118744 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118743 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 118684 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 118683 ggagcgttccg 118673 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 95895 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 95954 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95955 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 96014 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96015 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96074 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96075 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96134 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96135 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 96194 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96195 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 96254 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96255 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 96314 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96315 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 96374 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96375 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 96434 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 96435 ggagcgttccg 96445
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 14669 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 14728 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14729 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 14788 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14789 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 14848 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14849 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 14908 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14909 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 14968 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14969 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 15028 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15029 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 15088 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15089 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 15148 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15149 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 15208 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 15209 ggagcgttccg 15219 Score = 1053 bits (531), Expect = 0.0 Identities = 548/551 (99%), Gaps = 2/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 |||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||| Sbjct: 122944 gcttatggacccgaac-taggtgatctatccatgaccaggatgaagcttggatgaaacta 123002 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123003 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 123062 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123063 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 123122 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123123 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 123182 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123183 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 123242 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123243 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 123302 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123303 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 123362 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123363 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 123422 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123423 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 123482 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 123483 ggagcgttccg 123493
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141477 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 141536 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141537 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 141596 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141597 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 141656 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141657 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 141716 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141717 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 141776 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141777 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 141836 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141837 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 141896 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141897 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 141956 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141957 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 142016 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 142017 ggagcgttccg 142027
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 20904 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 20963 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20964 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 21023 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21024 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 21083 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21084 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 21143 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21144 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 21203 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21204 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 21263 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21264 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 21323 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21324 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 21383 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21384 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 21443 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 21444 ggagcgttccg 21454 Score = 1055 bits (532), Expect = 0.0 Identities = 549/552 (99%), Gaps = 2/552 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 44214 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 44155 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg- 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44154 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgt 44095 Query: 120 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 179 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 44094 aaatgccactcgaacccagagctagttggttctccccgaaatgcgttgaggcgcagcagt 44035 Query: 180 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44034 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 43975 Query: 240 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43974 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 43915 Query: 300 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43914 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 43855 Query: 360 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43854 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 43795 Query: 420 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43794 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 43735 Query: 480 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43734 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 43675 Query: 540 gggagcgttccg 551 |||||||||||| Sbjct: 43674 gggagcgttccg 43663
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 843 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 784 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 783 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 724 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 723 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 664 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 663 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 604 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 603 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 544 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 543 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 484 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 483 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 424 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 364 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 304 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 303 ggagcgttccg 293
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9268829 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 9268888 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268889 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 9268948 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268949 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9269008 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269009 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9269068 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269069 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 9269128 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269129 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 9269188 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269189 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 9269248 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269249 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 9269308 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269309 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 9269368 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 9269369 ggagcgttccg 9269379 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9056743 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 9056802 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056803 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 9056862 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056863 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9056922 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056923 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9056982 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056983 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 9057042 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057043 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 9057102 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057103 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 9057162 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057163 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 9057222 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057223 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 9057282 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 9057283 ggagcgttccg 9057293 Score = 1068 bits (539), Expect = 0.0 Identities = 549/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 9228329 gcttatggacccgaacctaggtgatctatccatgaccaggatgaagcttggatgaaacta 9228388 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228389 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 9228448 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228449 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9228508 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228509 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9228568 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228569 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 9228628 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228629 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 9228688 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228689 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 9228748 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228749 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 9228808 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228809 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 9228868 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 9228869 ggagcgttccg 9228879 Score = 1053 bits (531), Expect = 0.0 Identities = 548/551 (99%), Gaps = 2/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 |||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||| Sbjct: 9164918 gcttatggacccgaac-taggtgatctatccatgaccaggatgaagcttggatgaaacta 9164976 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164977 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 9165036 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165037 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9165096 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165097 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9165156 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165157 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 9165216 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165217 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 9165276 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165277 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 9165336 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165337 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 9165396 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165397 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 9165456 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 9165457 ggagcgttccg 9165467
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 19938814 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 19938873 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938874 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 19938933 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938934 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 19938993 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938994 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 19939053 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939054 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 19939113 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939114 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 19939173 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939174 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 19939233 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939234 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 19939293 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939294 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 19939353 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 19939354 ggagcgttccg 19939364 Score = 1068 bits (539), Expect = 0.0 Identities = 549/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10387681 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 10387740 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387741 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 10387800 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387801 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 10387860 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387861 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 10387920 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387921 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 10387980 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387981 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 10388040 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388041 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 10388100 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388101 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 10388160 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388161 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 10388220 Query: 541 ggagcgttccg 551 |||||||||| Sbjct: 10388221 agagcgttccg 10388231 Score = 1068 bits (539), Expect = 0.0 Identities = 549/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10276617 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 10276558 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276557 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 10276498 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276497 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 10276438 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276437 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 10276378 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276377 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 10276318 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276317 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 10276258 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276257 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 10276198 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276197 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 10276138 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10276137 gaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtagg 10276078 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 10276077 ggagcgttccg 10276067 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 462 gatcgagcgcccttgcgctgaagatgaacggggctaagc 500 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 231 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 290 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 291 tcggccagtgagacgatgggggataagcttcatcgtcgagag 332 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Minus Query: 403 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 462 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 31598996 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 31599055 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599056 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 31599115 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599116 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 31599175 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599176 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 31599235 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599236 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 31599295 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599296 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 31599355 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599356 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 31599415 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599416 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 31599475 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599476 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 31599535 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 31599536 ggagcgttccg 31599546 Score = 488 bits (246), Expect = e-134 Identities = 246/246 (100%) Strand = Plus / Minus Query: 306 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 366 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 426 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 486 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11509841 Query: 546 gttccg 551 |||||| Sbjct: 11509840 gttccg 11509835 Score = 285 bits (144), Expect = 8e-74 Identities = 144/144 (100%) Strand = Plus / Minus Query: 408 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 468 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 528 atgcatcggtaggggagcgttccg 551 |||||||||||||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgttccg 27411843 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 322 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 381 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 382 taaaggaggtggggg 396 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 325 gtcgagagggaaacagcccggatcaccagctaaggccc 362 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 224 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 278 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 33526312 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 33526371 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526372 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 33526431 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526432 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 33526491 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526492 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 33526551 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526552 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 33526611 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526612 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 33526671 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526672 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 33526731 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526732 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 33526791 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526792 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 33526851 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 33526852 ggagcgttccg 33526862 Score = 355 bits (179), Expect = 1e-94 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 315 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 374 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 375 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 434 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 435 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 495 ctaagcgatctgccgaagctgtgggatgtcaaaat 529 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 462 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 503 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 47229 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 47170 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47169 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 47110 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47109 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 47050 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47049 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 46990 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46989 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 46930 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46929 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 46870 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46869 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 46810 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46809 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 46750 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46749 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 46690 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 46689 ggagcgttccg 46679
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 71509 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 71568 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71569 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 71628 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71629 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 71688 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71689 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 71748 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71749 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 71808 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71809 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 71868 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71869 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 71928 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71929 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 71988 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71989 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 72048 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 72049 ggagcgttccg 72059
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 123053 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 122994 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122993 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 122934 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122933 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 122874 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122873 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 122814 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122813 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 122754 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122753 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 122694 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122693 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 122634 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122633 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 122574 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122573 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 122514 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 122513 ggagcgttccg 122503 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 99784 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 99843 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99844 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 99903 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99904 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 99963 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99964 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 100023 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100024 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 100083 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100084 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 100143 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100144 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 100203 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100204 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 100263 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100264 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 100323 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 100324 ggagcgttccg 100334
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 281 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 340 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 400 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 460 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 520 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 580 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 640 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 700 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 760 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 820 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 821 ggagcgttccg 831
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 476 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 535 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 595 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 596 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 655 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 715 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 775 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 835 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 836 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 895 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 896 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 955 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 956 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 1015 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 1016 ggagcgttccg 1026
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 347 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 406 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 407 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 466 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 467 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 526 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 586 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 587 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 646 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 706 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 707 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 766 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 826 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 886 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 887 ggagcgttccg 897
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 478 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 537 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 597 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 657 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 717 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 777 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 837 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 838 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 897 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 898 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 957 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 958 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 1017 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 1018 ggagcgttccg 1028
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 97 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 156 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 216 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 276 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 336 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 396 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 456 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 516 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 517 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 576 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 577 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 636 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 637 ggagcgttccg 647
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 297 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 356 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 416 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 476 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 536 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 596 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 656 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 657 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 716 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 776 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 777 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 836 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 837 ggagcgttccg 847
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 476 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 535 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 595 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 596 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 655 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 715 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 775 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 835 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 836 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 895 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 896 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 955 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 956 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 1015 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 1016 ggagcgttccg 1026
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 99 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 158 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 218 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 278 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 338 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 398 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 458 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 518 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 578 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 638 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 639 ggagcgttccg 649
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 19950090 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 19950149 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950150 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 19950209 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950210 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 19950269 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950270 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 19950329 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950330 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 19950389 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950390 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 19950449 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950450 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 19950509 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950510 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 19950569 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950570 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 19950629 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 19950630 ggagcgttccg 19950640 Score = 1068 bits (539), Expect = 0.0 Identities = 549/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10393720 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 10393779 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393780 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 10393839 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393840 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 10393899 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393900 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 10393959 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393960 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 10394019 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394020 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 10394079 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394080 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 10394139 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394140 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 10394199 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394200 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 10394259 Query: 541 ggagcgttccg 551 |||||||||| Sbjct: 10394260 agagcgttccg 10394270 Score = 1068 bits (539), Expect = 0.0 Identities = 549/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10282656 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 10282597 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282596 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 10282537 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282536 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 10282477 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282476 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 10282417 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282416 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 10282357 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282356 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 10282297 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282296 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 10282237 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282236 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 10282177 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10282176 gaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtagg 10282117 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 10282116 ggagcgttccg 10282106 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 462 gatcgagcgcccttgcgctgaagatgaacggggctaagc 500 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 231 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 290 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 291 tcggccagtgagacgatgggggataagcttcatcgtcgagag 332 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Minus Query: 403 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 462 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 123770 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 123711 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123710 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 123651 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123650 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 123591 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123590 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 123531 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123530 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 123471 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123470 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 123411 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123410 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 123351 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123350 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 123291 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123290 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 123231 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 123230 ggagcgttccg 123220 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 100461 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 100520 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100521 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 100580 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100581 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 100640 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100641 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 100700 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100701 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 100760 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100761 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 100820 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100821 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 100880 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100881 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 100940 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100941 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 101000 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 101001 ggagcgttccg 101011
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 119197 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 119138 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119137 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119078 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119077 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119018 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119017 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 118958 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118957 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 118898 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118897 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 118838 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118837 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 118778 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118777 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 118718 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118717 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 118658 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 118657 ggagcgttccg 118647 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 95842 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 95901 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95902 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 95961 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95962 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96021 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96022 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96081 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96082 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 96141 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96142 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 96201 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96202 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 96261 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96262 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 96321 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96322 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 96381 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 96382 ggagcgttccg 96392
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 119389 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 119330 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119329 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119270 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119269 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119210 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119209 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 119150 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119149 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 119090 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119089 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 119030 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119029 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 118970 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118969 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 118910 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118909 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 118850 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 118849 ggagcgttccg 118839 Score = 1076 bits (543), Expect = 0.0 Identities = 550/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 95505 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 95564 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95565 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 95624 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95625 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 95684 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95685 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 95744 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95745 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 95804 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95805 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 95864 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95865 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 95924 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95925 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 95984 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95985 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 96044 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 96045 ggagcgttccg 96055
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1068 bits (539), Expect = 0.0 Identities = 549/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 118170 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 118111 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118110 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 118051 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118050 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 117991 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117990 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 117931 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117930 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 117871 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117870 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 117811 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117810 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 117751 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117750 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 117691 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 117690 gaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtagg 117631 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 117630 ggagcgttccg 117620
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1068 bits (539), Expect = 0.0 Identities = 549/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 94073 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 94132 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94133 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 94192 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94193 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 94252 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94253 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 94312 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94313 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 94372 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94373 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 94432 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94433 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 94492 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94493 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 94552 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94553 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 94612 Query: 541 ggagcgttccg 551 |||||||||| Sbjct: 94613 agagcgttccg 94623
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1068 bits (539), Expect = 0.0 Identities = 549/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 57942 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 57883 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57882 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 57823 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57822 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 57763 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57762 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 57703 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57702 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 57643 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57642 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 57583 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57582 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 57523 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57522 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 57463 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 57462 gaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtagg 57403 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 57402 ggagcgttccg 57392
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1068 bits (539), Expect = 0.0 Identities = 549/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 28137 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 28196 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28197 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 28256 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28257 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 28316 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28317 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 28376 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28377 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 28436 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28437 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 28496 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28497 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 28556 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28557 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 28616 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28617 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 28676 Query: 541 ggagcgttccg 551 |||||||||| Sbjct: 28677 agagcgttccg 28687
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1068 bits (539), Expect = 0.0 Identities = 549/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9241452 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 9241393 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241392 agcagaggtccgaaccgtctgatgttgaagaatcagcggatgagttgtggttaggggtga 9241333 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241332 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9241273 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241272 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9241213 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241212 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 9241153 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241152 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 9241093 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241092 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 9241033 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241032 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 9240973 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240972 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 9240913 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 9240912 ggagcgttccg 9240902 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 196 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 255 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 256 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 315 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 316 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 361 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 109 bits (55), Expect = 1e-20 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 350 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 403 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 404 acagccaggaggtttgcctagaagcagccaccctttaaagag 445 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 511 agctgtgggatgtcaaaatgcatcggtaggggagcgttccg 551 |||| |||||| ||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccg 3580245 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Minus Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagct 514 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 7.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 349 accagctaaggcccctaaatgaccgctcagtgataaagga 388 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1068 bits (539), Expect = 0.0 Identities = 549/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 52665 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 52606 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 52605 agcagaggtccgaaccgtctgatgttgaagaatcagcggatgagttgtggttaggggtga 52546 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52545 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 52486 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52485 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 52426 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52425 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 52366 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52365 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 52306 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52305 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 52246 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52245 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 52186 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52185 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 52126 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 52125 ggagcgttccg 52115
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1061 bits (535), Expect = 0.0 Identities = 548/551 (99%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 475 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacca 534 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 594 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 595 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 654 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 655 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 714 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 774 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 834 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 835 ccctaaatgaccgctcagtgatagaggaggtgggggtgcaaagacagccaggaggtttgc 894 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 895 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 954 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 955 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 1014 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 1015 ggagcgttccg 1025
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1013 bits (511), Expect = 0.0 Identities = 544/551 (98%), Gaps = 3/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 122993 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 122934 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122933 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 122874 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122873 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 122814 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 122813 gactggacatctaggggtaaagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatc 122755 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122754 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 122695 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122694 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 122635 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 122634 cccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgc 122575 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 122574 ctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgct 122516 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122515 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 122456 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 122455 ggagcgttccg 122445 Score = 1013 bits (511), Expect = 0.0 Identities = 544/551 (98%), Gaps = 3/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 99744 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 99803 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99804 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 99863 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99864 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 99923 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 99924 gactggacatctaggggtaaagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatc 99982 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99983 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 100042 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100043 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 100102 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 100103 cccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgc 100162 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 100163 ctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgct 100221 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100222 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 100281 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 100282 ggagcgttccg 100292
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1013 bits (511), Expect = 0.0 Identities = 544/551 (98%), Gaps = 3/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 6097 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 6156 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6157 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 6216 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6217 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 6276 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 6277 gactggacatctaggggtaaagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatc 6335 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6336 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 6395 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6396 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 6455 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 6456 cccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgc 6515 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 6516 ctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgct 6574 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6575 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 6634 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 6635 ggagcgttccg 6645
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1013 bits (511), Expect = 0.0 Identities = 544/551 (98%), Gaps = 3/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 685 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 744 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 804 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 805 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 864 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 865 gactggacatctaggggtaaagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatc 923 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 924 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 983 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 984 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 1043 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1044 cccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgc 1103 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 1104 ctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgct 1162 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1163 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 1222 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 1223 ggagcgttccg 1233
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 973 bits (491), Expect = 0.0 Identities = 537/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 141434 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 141375 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141374 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 141315 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141314 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 141255 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 141254 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 141195 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 141194 gaggcaaactctgaatactagatatgaccccaaaataacaggggtaaaggtcggccagtg 141135 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141134 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 141075 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 141074 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 141015 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 141014 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 140955 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 140954 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 140895 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 140894 ggagcgttccg 140884 Score = 973 bits (491), Expect = 0.0 Identities = 537/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 112223 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 112282 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112283 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 112342 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112343 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 112402 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 112403 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 112462 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 112463 gaggcaaactctgaatactagatatgaccccaaaataacaggggtaaaggtcggccagtg 112522 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112523 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 112582 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 112583 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 112642 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 112643 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 112702 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 112703 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 112762 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 112763 ggagcgttccg 112773
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 965 bits (487), Expect = 0.0 Identities = 536/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 138831 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 138772 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138771 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 138712 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138711 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 138652 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 138651 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 138592 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 138591 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtg 138532 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138531 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 138472 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 138471 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 138412 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 138411 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 138352 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 138351 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 138292 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 138291 ggagcgttccg 138281 Score = 965 bits (487), Expect = 0.0 Identities = 536/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 110266 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 110325 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110326 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 110385 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110386 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 110445 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 110446 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 110505 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct: 110506 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtg 110565 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110566 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 110625 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 110626 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 110685 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 110686 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 110745 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 110746 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 110805 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 110806 ggagcgttccg 110816
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 965 bits (487), Expect = 0.0 Identities = 536/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 130994 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 130935 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130934 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 130875 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130874 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 130815 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 130814 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 130755 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 130754 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtg 130695 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130694 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 130635 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 130634 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 130575 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 130574 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 130515 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 130514 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 130455 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 130454 ggagcgttccg 130444 Score = 965 bits (487), Expect = 0.0 Identities = 536/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 103641 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 103700 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103701 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 103760 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103761 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 103820 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 103821 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 103880 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 103881 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtg 103940 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103941 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 104000 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 104001 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 104060 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 104061 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 104120 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 104121 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 104180 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 104181 ggagcgttccg 104191
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 965 bits (487), Expect = 0.0 Identities = 536/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 135228 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 135169 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135168 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 135109 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135108 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 135049 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 135048 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 134989 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 134988 gaggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtg 134929 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134928 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 134869 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 134868 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 134809 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 134808 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 134749 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 134748 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 134689 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 134688 ggagcgttccg 134678 Score = 965 bits (487), Expect = 0.0 Identities = 536/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 106678 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 106737 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106738 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 106797 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106798 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 106857 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 106858 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 106917 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 106918 gaggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtg 106977 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106978 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 107037 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 107038 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 107097 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 107098 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 107157 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 107158 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 107217 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 107218 ggagcgttccg 107228
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 965 bits (487), Expect = 0.0 Identities = 536/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 670 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 729 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 730 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 789 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 790 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 849 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 850 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 909 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 910 gaggcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtg 969 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 970 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 1029 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1030 ccctaaatgaccgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgc 1089 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1090 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 1149 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 1150 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtagg 1209 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 1210 ggagcgttccg 1220
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 965 bits (487), Expect = 0.0 Identities = 536/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 693 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 752 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 812 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 872 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 873 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 932 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 933 gaggcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtg 992 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 1052 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 1053 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 1112 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1113 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 1172 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1173 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 1232 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 1233 ggagcgttccg 1243
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 965 bits (487), Expect = 0.0 Identities = 536/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 135507 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 135448 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135447 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 135388 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135387 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 135328 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 135327 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 135268 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 135267 gaggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtg 135208 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135207 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 135148 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 135147 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 135088 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135087 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 135028 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 135027 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 134968 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 134967 ggagcgttccg 134957 Score = 965 bits (487), Expect = 0.0 Identities = 536/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 106900 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 106959 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106960 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 107019 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107020 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 107079 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 107080 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 107139 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 107140 gaggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtg 107199 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107200 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 107259 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 107260 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 107319 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 107320 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 107379 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 107380 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 107439 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 107440 ggagcgttccg 107450
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 965 bits (487), Expect = 0.0 Identities = 536/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 674 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 733 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 793 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 853 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 854 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 913 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 914 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtg 973 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 974 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 1033 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 1034 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 1093 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1094 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 1153 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1154 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaggcatcggtagg 1213 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 1214 ggagcgttccg 1224
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 957 bits (483), Expect = 0.0 Identities = 535/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 132102 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 132043 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132042 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 131983 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131982 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 131923 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 131922 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 131863 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131862 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtg 131803 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131802 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 131743 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 131742 ccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 131683 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 131682 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 131623 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 131622 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 131563 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 131562 ggagcgttccg 131552 Score = 957 bits (483), Expect = 0.0 Identities = 535/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 104776 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 104835 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104836 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 104895 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104896 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 104955 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 104956 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 105015 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105016 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtg 105075 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105076 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 105135 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 105136 ccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 105195 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 105196 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 105255 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 105256 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 105315 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 105316 ggagcgttccg 105326
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 957 bits (483), Expect = 0.0 Identities = 535/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 136265 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 136206 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136205 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 136146 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136145 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 136086 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 136085 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 136026 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 136025 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 135966 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135965 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 135906 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 135905 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 135846 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135845 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 135786 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 135785 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 135726 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 135725 ggagcgttccg 135715 Score = 957 bits (483), Expect = 0.0 Identities = 535/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 107292 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 107351 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107352 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 107411 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107412 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 107471 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 107472 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 107531 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 107532 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 107591 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107592 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 107651 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 107652 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 107711 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 107712 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 107771 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 107772 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 107831 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 107832 ggagcgttccg 107842
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 957 bits (483), Expect = 0.0 Identities = 535/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 142206 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 142147 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142146 agcggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 142087 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 142086 aatgccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagtt 142027 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 142026 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 141967 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 141966 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 141907 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 141906 agacgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggc 141847 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141846 ccctaaatgatcgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgc 141787 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 141786 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 141727 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 141726 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 141667 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 141666 ggagcgttccg 141656 Score = 957 bits (483), Expect = 0.0 Identities = 535/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 111122 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 111181 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111182 agcggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 111241 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 111242 aatgccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagtt 111301 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 111302 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 111361 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 111362 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 111421 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 111422 agacgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggc 111481 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 111482 ccctaaatgatcgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgc 111541 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 111542 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 111601 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 111602 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 111661 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 111662 ggagcgttccg 111672
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 957 bits (483), Expect = 0.0 Identities = 535/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 135919 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 135860 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135859 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 135800 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135799 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 135740 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 135739 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 135680 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 135679 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 135620 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135619 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 135560 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 135559 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 135500 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135499 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 135440 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 135439 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 135380 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 135379 ggagcgttccg 135369 Score = 957 bits (483), Expect = 0.0 Identities = 535/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 106506 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 106565 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106566 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 106625 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106626 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 106685 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 106686 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 106745 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 106746 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 106805 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106806 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 106865 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 106866 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 106925 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 106926 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 106985 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 106986 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 107045 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 107046 ggagcgttccg 107056
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 957 bits (483), Expect = 0.0 Identities = 535/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 132095 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 132036 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132035 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 131976 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131975 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 131916 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 131915 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 131856 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131855 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtg 131796 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131795 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 131736 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 131735 ccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 131676 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 131675 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 131616 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 131615 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 131556 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 131555 ggagcgttccg 131545 Score = 957 bits (483), Expect = 0.0 Identities = 535/551 (97%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 104774 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 104833 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104834 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 104893 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104894 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 104953 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 104954 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 105013 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105014 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtg 105073 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105074 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 105133 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 105134 ccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 105193 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 105194 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 105253 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 105254 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 105313 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 105314 ggagcgttccg 105324
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 955 bits (482), Expect = 0.0 Identities = 535/551 (97%), Gaps = 5/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 127190 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 127131 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127130 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 127071 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127070 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 127011 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 127010 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 126951 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 126950 gaggcaaactctgaatactagatatgaccccaaa----caggggtcaaggtcggccagtg 126895 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126894 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 126835 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 126834 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 126775 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 126774 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 126715 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126714 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 126655 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 126654 ggagcgttccg 126644 Score = 955 bits (482), Expect = 0.0 Identities = 535/551 (97%), Gaps = 5/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 107732 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 107791 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107792 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 107851 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107852 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 107911 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 107912 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 107971 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 107972 gaggcaaactctgaatactagatatgaccccaaa----caggggtcaaggtcggccagtg 108027 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108028 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 108087 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 108088 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 108147 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 108148 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 108207 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108208 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 108267 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 108268 ggagcgttccg 108278
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 952 bits (480), Expect = 0.0 Identities = 538/556 (96%), Gaps = 6/556 (1%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 138912 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 138853 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138852 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 138793 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138792 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 138733 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 138732 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 138673 Query: 241 gaggcaaactctgaatactagatatgaccc-----aaaaataacaggggtcaaggtcggc 295 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 138672 gaggcaaactctgaatactagatatgaccccaaaacaaaataacaggggtcaaggtcggc 138613 Query: 296 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138612 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 138553 Query: 356 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 415 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 138552 aaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggagg 138493 Query: 416 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 475 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 138492 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 138433 Query: 476 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcg 535 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 138432 gcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcg 138373 Query: 536 gtaggggagcgttccg 551 |||||||||||||||| Sbjct: 138372 gtaggggagcgttccg 138357 Score = 952 bits (480), Expect = 0.0 Identities = 538/556 (96%), Gaps = 6/556 (1%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 111033 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 111092 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111093 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 111152 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111153 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 111212 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 111213 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 111272 Query: 241 gaggcaaactctgaatactagatatgaccc-----aaaaataacaggggtcaaggtcggc 295 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 111273 gaggcaaactctgaatactagatatgaccccaaaacaaaataacaggggtcaaggtcggc 111332 Query: 296 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111333 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 111392 Query: 356 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 415 |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 111393 aaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggagg 111452 Query: 416 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 475 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 111453 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 111512 Query: 476 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcg 535 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 111513 gcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcg 111572 Query: 536 gtaggggagcgttccg 551 |||||||||||||||| Sbjct: 111573 gtaggggagcgttccg 111588
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 135627 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 135568 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135567 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 135508 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135507 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 135448 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 135447 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 135388 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 135387 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 135328 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135327 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 135268 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 135267 ccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 135208 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135207 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 135148 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 135147 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 135088 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 135087 ggagcgttccg 135077 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 107003 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 107062 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107063 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 107122 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107123 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 107182 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 107183 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 107242 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 107243 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 107302 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107303 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 107362 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 107363 ccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 107422 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 107423 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 107482 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 107483 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 107542 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 107543 ggagcgttccg 107553
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 2197 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 2256 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2257 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 2316 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2317 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 2376 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 2377 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 2436 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 2437 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 2496 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2497 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 2556 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 2557 ccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 2616 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 2617 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 2676 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 2677 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 2736 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 2737 ggagcgttccg 2747
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 672 gcttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaacta 731 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 732 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 791 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 792 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 851 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 852 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 911 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 912 gaggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtg 971 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 972 agacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 1031 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 1032 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 1091 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1092 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 1151 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1152 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 1211 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 1212 ggagcgttccg 1222
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 134873 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 134814 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134813 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 134754 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134753 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 134694 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 134693 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 134634 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 134633 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 134574 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134573 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 134514 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 134513 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 134454 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 134453 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 134394 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| Sbjct: 134393 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 134334 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 134333 ggagcgttccg 134323 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 106163 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 106222 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106223 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 106282 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106283 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 106342 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 106343 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 106402 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 106403 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 106462 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106463 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 106522 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 106523 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 106582 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 106583 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 106642 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| Sbjct: 106643 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 106702 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 106703 ggagcgttccg 106713
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 132325 gcttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaacta 132266 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 132265 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 132206 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132205 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 132146 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 132145 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 132086 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 132085 gaggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtg 132026 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132025 agacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 131966 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 131965 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 131906 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 131905 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 131846 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131845 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 131786 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 131785 ggagcgttccg 131775 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 104439 gcttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaacta 104498 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 104499 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 104558 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104559 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 104618 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 104619 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 104678 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 104679 gaggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtg 104738 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104739 agacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 104798 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 104799 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 104858 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 104859 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 104918 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104919 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 104978 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 104979 ggagcgttccg 104989
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 135008 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 134949 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134948 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 134889 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134888 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 134829 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 134828 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 134769 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 134768 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 134709 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134708 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 134649 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 134648 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 134589 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 134588 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 134529 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| Sbjct: 134528 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 134469 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 134468 ggagcgttccg 134458 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 106335 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 106394 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106395 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 106454 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106455 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 106514 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 106515 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 106574 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 106575 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 106634 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106635 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 106694 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 106695 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 106754 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 106755 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 106814 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| Sbjct: 106815 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 106874 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 106875 ggagcgttccg 106885
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 135006 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 134947 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134946 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 134887 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134886 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 134827 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 134826 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 134767 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 134766 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 134707 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134706 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 134647 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 134646 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 134587 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 134586 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 134527 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| Sbjct: 134526 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 134467 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 134466 ggagcgttccg 134456 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 106332 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 106391 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106392 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 106451 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106452 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 106511 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 106512 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 106571 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 106572 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 106631 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106632 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 106691 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 106692 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 106751 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 106752 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 106811 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| Sbjct: 106812 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 106871 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 106872 ggagcgttccg 106882
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 134918 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 134859 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134858 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 134799 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134798 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 134739 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 134738 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 134679 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 134678 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 134619 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134618 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 134559 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 134558 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 134499 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 134498 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 134439 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| Sbjct: 134438 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 134379 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 134378 ggagcgttccg 134368 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 106210 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 106269 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106270 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 106329 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106330 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 106389 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 106390 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 106449 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 106450 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 106509 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106510 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 106569 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 106570 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 106629 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 106630 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 106689 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| Sbjct: 106690 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 106749 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 106750 ggagcgttccg 106760
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 950 bits (479), Expect = 0.0 Identities = 535/551 (97%), Gaps = 2/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 133549 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 133490 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133489 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 133430 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133429 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 133370 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 133369 gactagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 133310 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 133309 gaggcaaactctgaatactagatatgacccaaaaatcacaggg-tcaaggtcggccagtg 133251 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133250 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 133191 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 133190 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 133131 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 133130 ctagaagccgccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 133071 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 133070 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 133011 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 133010 ggagcgttccg 133000 Score = 950 bits (479), Expect = 0.0 Identities = 535/551 (97%), Gaps = 2/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 104422 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 104481 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104482 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 104541 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104542 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 104601 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 104602 gactagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 104661 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 104662 gaggcaaactctgaatactagatatgacccaaaaatcacaggg-tcaaggtcggccagtg 104720 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104721 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 104780 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 104781 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 104840 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 104841 ctagaagccgccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 104900 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 104901 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 104960 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 104961 ggagcgttccg 104971
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 133286 gcttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaacta 133227 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 133226 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 133167 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133166 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 133107 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 133106 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 133047 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 133046 gaggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtg 132987 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132986 agacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 132927 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 132926 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 132867 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 132866 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 132807 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132806 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 132747 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 132746 ggagcgttccg 132736 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 105363 gcttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaacta 105422 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 105423 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 105482 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105483 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 105542 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 105543 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 105602 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 105603 gaggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtg 105662 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105663 agacggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 105722 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 105723 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 105782 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 105783 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 105842 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105843 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 105902 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 105903 ggagcgttccg 105913
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 135625 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 135566 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135565 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 135506 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135505 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 135446 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 135445 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 135386 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 135385 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 135326 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135325 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 135266 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 135265 ccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 135206 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135205 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 135146 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 135145 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 135086 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 135085 ggagcgttccg 135075 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 107001 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 107060 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107061 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 107120 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 107180 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 107181 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 107240 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 107241 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 107300 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 107360 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 107361 ccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 107420 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 107421 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 107480 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 107481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 107540 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 107541 ggagcgttccg 107551
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 135356 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 135297 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135296 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 135237 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135236 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 135177 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 135176 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 135117 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 135116 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 135057 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135056 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 134997 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 134996 ccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 134937 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 134936 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 134877 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 134876 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 134817 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 134816 ggagcgttccg 134806 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 106782 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 106841 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106842 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 106901 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106902 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 106961 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 106962 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 107021 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 107022 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 107081 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107082 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 107141 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 107142 ccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 107201 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 107202 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 107261 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 107262 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 107321 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 107322 ggagcgttccg 107332
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 139036 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 138977 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138976 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 138917 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138916 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 138857 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 138856 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 138797 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 138796 gaggcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtg 138737 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138736 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 138677 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 138676 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 138617 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 138616 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 138557 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 138556 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 138497 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 138496 ggagcgttccg 138486 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 110263 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 110322 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110323 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 110382 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110383 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 110442 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 110443 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 110502 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 110503 gaggcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtg 110562 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110563 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 110622 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 110623 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 110682 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 110683 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 110742 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 110743 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 110802 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 110803 ggagcgttccg 110813
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 950 bits (479), Expect = 0.0 Identities = 534/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 770 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 829 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 830 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 889 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 890 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 949 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 950 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 1009 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 1010 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtg 1069 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1070 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 1129 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 1130 ccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 1189 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1190 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 1249 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1250 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 1309 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 1310 ggagcgttccg 1320
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 942 bits (475), Expect = 0.0 Identities = 533/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 131118 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 131059 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131058 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 130999 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130998 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 130939 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 130938 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 130879 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 130878 gaggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtg 130819 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130818 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 130759 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 130758 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 130699 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 130698 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 130639 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||| Sbjct: 130638 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaaaacatcggtagg 130579 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 130578 ggagcgttccg 130568 Score = 942 bits (475), Expect = 0.0 Identities = 533/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 102327 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 102386 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102387 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 102446 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102447 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 102506 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 102507 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 102566 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 102567 gaggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtg 102626 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102627 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 102686 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 102687 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 102746 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 102747 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 102806 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||| Sbjct: 102807 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaaaacatcggtagg 102866 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 102867 ggagcgttccg 102877
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 942 bits (475), Expect = 0.0 Identities = 533/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 134885 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 134826 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134825 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 134766 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134765 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 134706 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 134705 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 134646 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| Sbjct: 134645 gaggcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtg 134586 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134585 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 134526 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 134525 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 134466 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 134465 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 134406 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| Sbjct: 134405 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 134346 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 134345 ggagcgttccg 134335 Score = 942 bits (475), Expect = 0.0 Identities = 533/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 106177 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 106236 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106237 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 106296 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106297 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 106356 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 106357 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 106416 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||| Sbjct: 106417 gaggcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtg 106476 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106477 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 106536 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 106537 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 106596 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 106597 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 106656 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| Sbjct: 106657 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 106716 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 106717 ggagcgttccg 106727
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 934 bits (471), Expect = 0.0 Identities = 532/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 131194 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 131135 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131134 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 131075 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131074 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 131015 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 131014 gactagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 130955 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 130954 gaggcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtg 130895 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130894 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 130835 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 130834 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgc 130775 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 130774 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 130715 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 130714 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaagaatcggtagg 130655 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 130654 ggagcgttccg 130644 Score = 934 bits (471), Expect = 0.0 Identities = 532/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 104200 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 104259 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104260 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 104319 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104320 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 104379 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 104380 gactagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 104439 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 104440 gaggcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtg 104499 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104500 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 104559 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 104560 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgc 104619 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 104620 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 104679 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||| Sbjct: 104680 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaagaatcggtagg 104739 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 104740 ggagcgttccg 104750
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 926 bits (467), Expect = 0.0 Identities = 531/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 679 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 738 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 798 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 799 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 858 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 859 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 918 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 919 gaggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtg 978 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 979 agacgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggc 1038 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 1039 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 1098 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1099 ctaaaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 1158 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 |||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||| Sbjct: 1159 gaagatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaaaacatcggtagg 1218 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 1219 ggagcgttccg 1229
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 926 bits (467), Expect = 0.0 Identities = 531/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 129857 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 129798 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129797 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 129738 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129737 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 129678 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 ||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 129677 gaccggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 129618 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||| Sbjct: 129617 gaggcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtg 129558 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 129557 agacgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggc 129498 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 129497 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 129438 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 129437 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 129378 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 129377 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgaatcggtagg 129318 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 129317 ggagcgttccg 129307 Score = 926 bits (467), Expect = 0.0 Identities = 531/551 (96%), Gaps = 1/551 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 102599 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 102658 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102659 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 102718 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102719 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 102778 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 ||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 102779 gaccggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 102838 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||| Sbjct: 102839 gaggcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtg 102898 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 102899 agacgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggc 102958 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 102959 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 103018 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 103019 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 103078 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 103079 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgaatcggtagg 103138 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 103139 ggagcgttccg 103149
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 922 bits (465), Expect = 0.0 Identities = 530/551 (96%), Gaps = 8/551 (1%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 134311 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 134252 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134251 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 134192 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134191 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 134132 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 134131 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 134072 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||| || ||| ||||||||||||||||||| Sbjct: 134071 gaggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtg 134019 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134018 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 133959 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 133958 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 133899 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 133898 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 133839 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 133838 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 133779 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 133778 ggagcgttccg 133768 Score = 922 bits (465), Expect = 0.0 Identities = 530/551 (96%), Gaps = 8/551 (1%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 105971 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 106030 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106031 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 106090 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106091 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 106150 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 106151 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 106210 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||| || ||| ||||||||||||||||||| Sbjct: 106211 gaggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtg 106263 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106264 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 106323 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 106324 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 106383 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 106384 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 106443 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 106444 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 106503 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 106504 ggagcgttccg 106514
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 920 bits (464), Expect = 0.0 Identities = 532/552 (96%), Gaps = 2/552 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 1168 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 1227 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1228 agtgagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 1287 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1288 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 1347 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 1348 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 1407 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1408 gaggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtg 1467 Query: 301 agacgat-gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 359 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1468 agacgatggggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 1527 Query: 360 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 419 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 1528 cccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttg 1587 Query: 420 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 479 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1588 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc 1647 Query: 480 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 539 ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 1648 cgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaaacatcggtag 1707 Query: 540 gggagcgttccg 551 |||||||||||| Sbjct: 1708 gggagcgttccg 1719
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 920 bits (464), Expect = 0.0 Identities = 471/472 (99%), Gaps = 1/472 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 478 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 537 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 597 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 657 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 717 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 777 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 778 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 837 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 838 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 897 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 898 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 949
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 912 bits (460), Expect = 0.0 Identities = 512/528 (96%), Gaps = 1/528 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 654 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 713 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 773 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 833 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 834 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 893 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 894 gaggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtg 953 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 954 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 1013 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 |||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 1014 ccctaaatgaccgcccagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 1073 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1074 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 1133 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 528 ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1134 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaa 1181
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 908 bits (458), Expect = 0.0 Identities = 492/502 (98%), Gaps = 1/502 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 122533 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 122474 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122473 agcagaggttcgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 122414 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122413 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 122354 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122353 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatt 122294 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| Sbjct: 122293 gaggcaaactctgaatactagatatgacccaaaaataataggattcaaagtcggccagtg 122234 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 122233 agacgatgggggataagcttcatcgtcgagagggaaacagcctggatcaccagctaaggc 122174 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 122173 ccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagccaggaggtttgc 122114 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 122113 ctagaagcagccaccctttaaagagtgcgtaatagctcactaatcgagcgcccttgcgct 122054 Query: 481 gaagatgaacggggctaagcga 502 |||||||||||||||||||||| Sbjct: 122053 gaagatgaacggggctaagcga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 908 bits (458), Expect = 0.0 Identities = 492/502 (98%), Gaps = 1/502 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 12825074 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 12825015 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825014 agcagaggttcgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 12824955 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824954 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 12824895 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824894 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatt 12824835 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| Sbjct: 12824834 gaggcaaactctgaatactagatatgacccaaaaataataggattcaaagtcggccagtg 12824775 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 12824774 agacgatgggggataagcttcatcgtcgagagggaaacagcctggatcaccagctaaggc 12824715 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824714 ccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagccaggaggtttgc 12824655 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 12824654 ctagaagcagccaccctttaaagagtgcgtaatagctcactaatcgagcgcccttgcgct 12824595 Query: 481 gaagatgaacggggctaagcga 502 |||||||||||||||||||||| Sbjct: 12824594 gaagatgaacggggctaagcga 12824573
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 908 bits (458), Expect = 0.0 Identities = 528/550 (96%), Gaps = 1/550 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||| Sbjct: 681 gcttatggacccgaacctgggtgatctatccatgaccaggatggagcttgggtgaaacta 740 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 800 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 860 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 861 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 920 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 921 gaggcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtg 980 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 981 agacaatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 1040 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||| Sbjct: 1041 ccctaaatgaccgctcaatgataaaggaggtaggggtgcacagacagccacgaggtttgc 1100 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1101 ctataagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 1160 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 1161 caagatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 1220 Query: 541 ggagcgttcc 550 |||||||||| Sbjct: 1221 ggagcgttcc 1230
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 908 bits (458), Expect = 0.0 Identities = 528/550 (96%), Gaps = 1/550 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 692 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 751 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 752 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 811 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 871 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 872 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 931 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 932 gaggcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtg 991 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 992 agaccatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggc 1051 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| Sbjct: 1052 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaagaggtttgc 1111 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1112 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatccagcgctcttgcgcc 1171 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 || ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 1172 caaaatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtagg 1231 Query: 541 ggagcgttcc 550 |||||||||| Sbjct: 1232 ggagcgttcc 1241
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 908 bits (458), Expect = 0.0 Identities = 528/550 (96%), Gaps = 1/550 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 693 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 752 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 812 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 872 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 ||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 873 gactggacatctaagggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 932 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||| Sbjct: 933 gaggcaaactctgaatactaaatatgacctcaaaataacaggggttaaggtcggccagtg 992 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 993 agacgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggc 1052 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| Sbjct: 1053 ccctaaatgaccgctcagtgataaaggaggtaggggtgcacagacagccaagaggtttgc 1112 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 ||| |||||||||||||| ||||||||||||||| |||||||||||||||| ||||||| Sbjct: 1113 ctaaaagcagccacccttgaaagagtgcgtaataactcactgatcgagcgctcttgcgcc 1172 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 1173 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtagg 1232 Query: 541 ggagcgttcc 550 |||||||||| Sbjct: 1233 ggagcgttcc 1242
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 906 bits (457), Expect = 0.0 Identities = 533/553 (96%), Gaps = 4/553 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 2441 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 2500 Query: 61 agcagagg-tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 119 || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2501 agtggagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 2560 Query: 120 aaatg-ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 178 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2561 aaatggccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 2620 Query: 179 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 238 |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 2621 ttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaa 2680 Query: 239 tcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccag 298 |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| || Sbjct: 2681 tcgaggcaaactctgaatactagatatgactcaaaa-taacaggggtcaaggtcggctag 2739 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2740 tgagacgatgggggataagcttcatcgtcgagagggaaacagtccggatcaccagctaag 2799 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 2800 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 2859 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 |||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||| Sbjct: 2860 gcctagaagcagccacccttgaaagagtgcgtaatagcscactgatcgagcgctcttgcg 2919 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 538 | ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 2920 ccgaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggta 2979 Query: 539 ggggagcgttccg 551 ||||||||||||| Sbjct: 2980 ggggagcgttccg 2992
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 872 bits (440), Expect = 0.0 Identities = 524/551 (95%), Gaps = 7/551 (1%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 693 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 752 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 812 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 872 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||| Sbjct: 873 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatc 932 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| | |||||||| ||||||||||| || Sbjct: 933 gaggcaaactctgaatactagatatgacc------tcacaggggttaaggtcggccaatg 986 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 987 agacgatgggggataagcttcatcttccagagggaaacagcccggatcaccagctaaggc 1046 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 1047 ccctaaatgaccgctcagtgataaaggaggtaggggtgcaaagacagccacgaggtttgc 1106 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1107 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 1166 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 540 || |||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 1167 caaaatgaacggggctaaacgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 1226 Query: 541 ggagcgttccg 551 ||||||||||| Sbjct: 1227 ggagcgttccg 1237
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 862 bits (435), Expect = 0.0 Identities = 528/554 (95%), Gaps = 5/554 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacct--gggtgatctatcc-tgaccaggatgaagcttggatgaaac 58 ||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| Sbjct: 687 gcttatggacccgaaccctggggtgatctatccatgaccaggatgaagcttgggtgaaac 746 Query: 59 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 118 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 taagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 806 Query: 119 gaaatgccactcgaacccagagctagctggttctcccc-gaaatgcgttgaggcgcagca 177 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 807 gaaatgccactcgaacccagagctagctggttctcccccgaaatgcgttgaggcgcagca 866 Query: 178 gttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaa 237 ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 867 gttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaa 926 Query: 238 atcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggcca 297 |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| | Sbjct: 927 atcgaggcaaactctgaatactagatatgacctaaaaataacaagggtcaaggtcggcaa 986 Query: 298 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 357 |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 987 gtgagacgatgggggataagcttcatcgtcgagagggaaacagccctgatcacccgctaa 1046 Query: 358 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 417 ||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 1047 ggcccctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtt 1106 Query: 418 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 477 || ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1107 tg-ctataagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgc 1165 Query: 478 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggt 537 || ||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| Sbjct: 1166 gccgaagatgaacggggctaagtgatctgccgaagctgtgggatgtaaaaaggcatcggt 1225 Query: 538 aggggagcgttccg 551 |||||||||||||| Sbjct: 1226 aggggagcgttccg 1239
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 860 bits (434), Expect = 0.0 Identities = 527/558 (94%), Gaps = 15/558 (2%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 139687 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 139628 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139627 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 139568 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 139567 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggtt 139508 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 139507 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 139448 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||| || || |||| |||||||||||||||||| Sbjct: 139447 gaggcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtg 139395 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139394 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 139335 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 139334 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 139275 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 139274 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 139215 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggat-------gtcaaaatgcat 533 ||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 139214 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaagtaaaaatgcat 139155 Query: 534 cggtaggggagcgttccg 551 |||||||||||||||||| Sbjct: 139154 cggtaggggagcgttccg 139137 Score = 860 bits (434), Expect = 0.0 Identities = 527/558 (94%), Gaps = 15/558 (2%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 110373 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 110432 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110433 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 110492 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 110493 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggtt 110552 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 110553 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 110612 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||| || || |||| |||||||||||||||||| Sbjct: 110613 gaggcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtg 110665 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110666 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 110725 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 110726 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 110785 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 110786 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 110845 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggat-------gtcaaaatgcat 533 ||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 110846 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaagtaaaaatgcat 110905 Query: 534 cggtaggggagcgttccg 551 |||||||||||||||||| Sbjct: 110906 cggtaggggagcgttccg 110923
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 856 bits (432), Expect = 0.0 Identities = 525/552 (95%), Gaps = 3/552 (0%) Strand = Plus / Plus Query: 3 cttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaa 61 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 676 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 735 Query: 62 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 121 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 795 Query: 122 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 855 Query: 182 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 856 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 915 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagt 299 ||||||||||||||||||||||||||| || |||||||||||| | |||||| ||||| Sbjct: 916 gaggcaaactctgaatactagatatgatccccaaataacaggggataaaggtcaaccagt 975 Query: 300 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 359 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 976 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 1035 Query: 360 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 419 ||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||| Sbjct: 1036 cccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttg 1095 Query: 420 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 479 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1096 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgc 1155 Query: 480 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 539 ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 1156 cgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtag 1215 Query: 540 gggagcgttccg 551 |||||||||||| Sbjct: 1216 gggagcgttccg 1227
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 848 bits (428), Expect = 0.0 Identities = 499/522 (95%), Gaps = 8/522 (1%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 158 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 217 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 218 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 277 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 278 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggtt 337 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 338 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 397 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||| || || |||| |||||||||||||||||| Sbjct: 398 gaggcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtg 450 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 510 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 511 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 570 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 571 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 630 Query: 481 gaagatgaacggggctaagcgatctgccgaagctgtgggatg 522 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 631 gaagatgaacggggctaagcgatctgccgaagctgtgggatg 672
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 846 bits (427), Expect = 0.0 Identities = 518/543 (95%), Gaps = 4/543 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 177517 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 177576 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 177577 agtggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtga 177635 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177636 aatgccactcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 177695 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 ||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||| Sbjct: 177696 gactggacatctaggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatc 177755 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggt-caaggtcggccagt 299 ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||| ||| Sbjct: 177756 gaggcaaactctgaatactagatatgacctcaaaataagaggggggcaaggtcggctagt 177815 Query: 300 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 359 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 177816 gagacgatgggggataagcttcatcgtcgagagggaaagagcccggatcaccagctaagg 177875 Query: 360 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 419 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 177876 cccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttg 177935 Query: 420 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 479 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 177936 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc 177995 Query: 480 tgaagatgaacggggctaagcgat-ctgccgaagctgtgggatgtcaaaatgcatcggta 538 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| | Sbjct: 177996 cgaagatgaacggggctaagcgatcctgccgaagctgtgggatgtcaaaatacatcggca 178055 Query: 539 ggg 541 ||| Sbjct: 178056 ggg 178058 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Plus Query: 403 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 462 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Plus Query: 403 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 462 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 357 aggcccctaaatgaccgctcag 378 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 gtcgagagggaaacagcccggatc 348 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 gtcgagagggaaacagcccggatc 348 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 842 bits (425), Expect = 0.0 Identities = 524/553 (94%), Gaps = 3/553 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 52013 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 51954 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51953 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 51894 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51893 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 51834 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 ||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||||| Sbjct: 51833 gactggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatc 51774 Query: 241 gaggcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagt 299 || |||||||||||||||||| |||||||| | |||||| |||||| ||||||||||||| Sbjct: 51773 gaagcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagt 51714 Query: 300 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51713 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 51654 Query: 360 cccctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagccaggaggttt 418 ||||||| ||| ||||||||||||||||||| | |||||||| ||||||||||||||||| Sbjct: 51653 cccctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggttt 51594 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 |||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| Sbjct: 51593 gcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcg 51534 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 538 | ||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||| Sbjct: 51533 ccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggta 51474 Query: 539 ggggagcgttccg 551 ||||||||||||| Sbjct: 51473 ggggagcgttccg 51461 Score = 842 bits (425), Expect = 0.0 Identities = 524/553 (94%), Gaps = 3/553 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 37815 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 37874 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37875 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 37934 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37935 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 37994 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 ||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||||| Sbjct: 37995 gactggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatc 38054 Query: 241 gaggcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagt 299 || |||||||||||||||||| |||||||| | |||||| |||||| ||||||||||||| Sbjct: 38055 gaagcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagt 38114 Query: 300 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38115 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 38174 Query: 360 cccctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagccaggaggttt 418 ||||||| ||| ||||||||||||||||||| | |||||||| ||||||||||||||||| Sbjct: 38175 cccctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggttt 38234 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 |||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| Sbjct: 38235 gcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcg 38294 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 538 | ||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||| Sbjct: 38295 ccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggta 38354 Query: 539 ggggagcgttccg 551 ||||||||||||| Sbjct: 38355 ggggagcgttccg 38367
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 842 bits (425), Expect = 0.0 Identities = 524/553 (94%), Gaps = 3/553 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 4743 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 4802 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4803 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 4862 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4863 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 4922 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 ||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||||| Sbjct: 4923 gactggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatc 4982 Query: 241 gaggcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagt 299 || |||||||||||||||||| |||||||| | |||||| |||||| ||||||||||||| Sbjct: 4983 gaagcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagt 5042 Query: 300 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5043 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 5102 Query: 360 cccctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagccaggaggttt 418 ||||||| ||| ||||||||||||||||||| | |||||||| ||||||||||||||||| Sbjct: 5103 cccctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggttt 5162 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 |||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| Sbjct: 5163 gcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcg 5222 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 538 | ||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||| Sbjct: 5223 ccgaatatgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggta 5282 Query: 539 ggggagcgttccg 551 ||||||||||||| Sbjct: 5283 ggggagcgttccg 5295
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 831 bits (419), Expect = 0.0 Identities = 525/558 (94%), Gaps = 8/558 (1%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| Sbjct: 672 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagctttggtgaaacta 731 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 791 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 792 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 851 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 ||||||||||||||||||||||||||||||| |||||||| | | ||||||||||||||| Sbjct: 852 gactggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatc 911 Query: 241 gaggcaaactctgaatactaga-tatgacccaaaaataacaggggtcaaggtcggccagt 299 || ||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||| Sbjct: 912 gaagcaaactctgaatactagaatatgacctaaaaataacaggggtaaaggtcggccagt 971 Query: 300 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 359 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 972 gagacgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaagg 1031 Query: 360 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 419 ||||||| ||| |||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 1032 cccctaattgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttg 1091 Query: 420 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 479 ||||||||||||||||||| ||| |||||||||||||| ||||||||||||| ||||||| Sbjct: 1092 cctagaagcagccacccttgaaatagtgcgtaatagcttactgatcgagcgctcttgcgc 1151 Query: 480 tgaagatgaacggggctaagcgatctgccgaagctgtgggatg------tcaaaatgcat 533 |||||| ||||||||||||||||| ||||||||||||||||| | ||||| ||| Sbjct: 1152 cgaagattaacggggctaagcgatccgccgaagctgtgggatgtaaaaataaaaatacat 1211 Query: 534 cggtaggggagcgttccg 551 |||||||||||||||||| Sbjct: 1212 cggtaggggagcgttccg 1229
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 825 bits (416), Expect = 0.0 Identities = 521/552 (94%), Gaps = 3/552 (0%) Strand = Plus / Minus Query: 3 cttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaa 61 ||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||| Sbjct: 117473 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaa 117414 Query: 62 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 121 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 117413 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 117354 Query: 122 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117353 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 117294 Query: 182 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 117293 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 117234 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaa-ggtcggccagt 299 ||||||||||||||||||||||||||| || |||||| ||||| || |||| ||||| Sbjct: 117233 gaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtcaaccagt 117174 Query: 300 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 359 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 117173 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 117114 Query: 360 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 419 |||||||||||||||| |||| |||||||||| || |||||||||||||||||||||||| Sbjct: 117113 cccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttg 117054 Query: 420 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 479 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 117053 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgc 116994 Query: 480 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 539 ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 116993 cgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtag 116934 Query: 540 gggagcgttccg 551 |||||||||||| Sbjct: 116933 gggagcgttccg 116922 Score = 825 bits (416), Expect = 0.0 Identities = 521/552 (94%), Gaps = 3/552 (0%) Strand = Plus / Plus Query: 3 cttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaa 61 ||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||||| Sbjct: 90629 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaa 90688 Query: 62 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 121 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 90689 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 90748 Query: 122 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90749 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 90808 Query: 182 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 90809 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 90868 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaa-ggtcggccagt 299 ||||||||||||||||||||||||||| || |||||| ||||| || |||| ||||| Sbjct: 90869 gaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtcaaccagt 90928 Query: 300 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 359 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 90929 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 90988 Query: 360 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 419 |||||||||||||||| |||| |||||||||| || |||||||||||||||||||||||| Sbjct: 90989 cccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttg 91048 Query: 420 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 479 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 91049 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgc 91108 Query: 480 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 539 ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 91109 cgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtag 91168 Query: 540 gggagcgttccg 551 |||||||||||| Sbjct: 91169 gggagcgttccg 91180
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 817 bits (412), Expect = 0.0 Identities = 520/552 (94%), Gaps = 3/552 (0%) Strand = Plus / Plus Query: 3 cttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaa 61 |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||| Sbjct: 676 cttatggacccgaacctgggtgatctatccatgaccaggatgaagctcgggtgaaactaa 735 Query: 62 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 121 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 795 Query: 122 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 855 Query: 182 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 856 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 915 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagt 299 ||||||||||||||||||||||||||| | |||||| |||| | | |||| ||||| Sbjct: 916 gaggcaaactctgaatactagatatgatctccgaataacgggggataagggtcaaccagt 975 Query: 300 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 359 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 976 gagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaagg 1035 Query: 360 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 419 ||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||| Sbjct: 1036 cccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttg 1095 Query: 420 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 479 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1096 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgc 1155 Query: 480 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 539 ||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 1156 cgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtag 1215 Query: 540 gggagcgttccg 551 |||||||||||| Sbjct: 1216 gggagcgttccg 1227
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 813 bits (410), Expect = 0.0 Identities = 484/508 (95%), Gaps = 8/508 (1%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 174 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 233 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 293 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 294 aatgccgctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggtt 353 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 354 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 413 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||| || || |||| |||||||||||||||||| Sbjct: 414 gaggcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtg 466 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 467 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 526 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 420 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 527 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 586 Query: 421 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 480 |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 587 ctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 646 Query: 481 gaagatgaacggggctaagcgatctgcc 508 |||||||||||||||||||||||||||| Sbjct: 647 gaagatgaacggggctaagcgatctgcc 674
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 813 bits (410), Expect = 0.0 Identities = 520/552 (94%), Gaps = 6/552 (1%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 86938 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 86997 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 86998 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 87057 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87058 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 87117 Query: 181 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 87118 gactggaccatctaggggtaaagcactgtttcggtacgggccgcgagagcggtaccaaat 87177 Query: 240 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 299 |||||||||||||||||||||||| || ||| ||||| |||||| | |||| ||||| Sbjct: 87178 cgaggcaaactctgaatactagat-tgcccc---aataaaaggggtaagggtcaaccagt 87233 Query: 300 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 359 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 87234 gagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaagg 87293 Query: 360 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 419 ||||||||||||||||||||||| ||||| || | |||||||||||||||||||||||| Sbjct: 87294 cccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccaggaggtttg 87353 Query: 420 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 479 |||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 87354 cctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc 87413 Query: 480 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 539 ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 87414 cgaagatgaacgggactaagcgatctgccgaagctgtgggatgtcaaaatacatcggtag 87473 Query: 540 gggagcgttccg 551 |||||||||||| Sbjct: 87474 gggagcgttccg 87485
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 779 bits (393), Expect = 0.0 Identities = 521/558 (93%), Gaps = 8/558 (1%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 145884 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 145825 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 145824 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 145765 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145764 aatgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 145705 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 145704 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 145645 Query: 240 cgaggcaaactctgaatactagatatga--cccaa---aaataacagg-ggtcaaggtcg 293 |||||||||||||||||||||| ||||| |||| ||| |||||| ||| |||||| Sbjct: 145644 cgaggcaaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtca 145585 Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 145584 gccagtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccag 145525 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 ||||||||||||||||||||||||||| | |||||||| || ||||| |||||||||||| Sbjct: 145524 ctaaggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagccagga 145465 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 145464 agtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 145405 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 533 |||||| ||| ||||||||| ||||||| |||||||||||||||||||||||||| ||| Sbjct: 145404 ttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacat 145345 Query: 534 cggtaggggagcgttccg 551 |||||||||||||||||| Sbjct: 145344 cggtaggggagcgttccg 145327 Score = 779 bits (393), Expect = 0.0 Identities = 521/558 (93%), Gaps = 8/558 (1%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 112578 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 112637 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 112638 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 112697 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112698 aatgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 112757 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 112758 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 112817 Query: 240 cgaggcaaactctgaatactagatatga--cccaa---aaataacagg-ggtcaaggtcg 293 |||||||||||||||||||||| ||||| |||| ||| |||||| ||| |||||| Sbjct: 112818 cgaggcaaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtca 112877 Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 112878 gccagtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccag 112937 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 ||||||||||||||||||||||||||| | |||||||| || ||||| |||||||||||| Sbjct: 112938 ctaaggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagccagga 112997 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 112998 agtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 113057 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 533 |||||| ||| ||||||||| ||||||| |||||||||||||||||||||||||| ||| Sbjct: 113058 ttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacat 113117 Query: 534 cggtaggggagcgttccg 551 |||||||||||||||||| Sbjct: 113118 cggtaggggagcgttccg 113135
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 771 bits (389), Expect = 0.0 Identities = 515/552 (93%), Gaps = 5/552 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 89024 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 89083 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 89084 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 89143 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89144 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 89203 Query: 181 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 ||||||| ||||||||||||||||||||||||||| ||||| || |||||||||||||| Sbjct: 89204 gactggaccatctaggggtaaagcactgtttcggtacgggccacgagagcggtaccaaat 89263 Query: 240 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 299 |||||||||||||||||||||||| | ||||| | || ||||| | |||| ||||| Sbjct: 89264 cgaggcaaactctgaatactagat-taccccaata--aaagggggtaagggtcaaccagt 89320 Query: 300 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 359 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 89321 gagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaagg 89380 Query: 360 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 419 ||||||||||||||||||||||| ||||| || | |||||||||||||||||||||||| Sbjct: 89381 cccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccaggaggtttg 89440 Query: 420 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 479 |||||||||||||| |||| |||||||||||||||||||||||||||||||| | ||||| Sbjct: 89441 cctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcgtgcgc 89500 Query: 480 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 539 ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 89501 cgaagatgaacgggactaagcgatctgccgaagctgtgggatgtaaaaatacatcggtag 89560 Query: 540 gggagcgttccg 551 |||||||||||| Sbjct: 89561 gggagcgttccg 89572
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 763 bits (385), Expect = 0.0 Identities = 395/397 (99%), Gaps = 1/397 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 588 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 647 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 648 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 707 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 708 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 767 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 827 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 828 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 887 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 888 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 947 Query: 361 ccctaaatgaccgctcagtgataaaggaggtgggggt 397 ||||||||||||||||||||||||||||||| ||||| Sbjct: 948 ccctaaatgaccgctcagtgataaaggaggtaggggt 984
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 755 bits (381), Expect = 0.0 Identities = 513/553 (92%), Gaps = 3/553 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 679 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 738 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 739 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 798 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 799 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 858 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 |||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 859 gactagactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 918 Query: 240 cgaggcaaactctgaatactagatatgacccaaaaataacag-gggtcaaggtcggccag 298 |||||||||||||||||||| |||| ||| | ||||| || | || | |||| |||| Sbjct: 919 cgaggcaaactctgaatactggataggactccctaataatagagagtaagggtcaaccag 978 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 |||||| ||||||||||||||||| |||||||||| |||||||| ||||||| |||||| Sbjct: 979 tgagacagtgggggataagcttcattgtcgagaggggaacagcccagatcaccggctaag 1038 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 ||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1039 gcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggttt 1098 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 ||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 1099 gcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 1158 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta 538 | ||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 1159 ccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggta 1218 Query: 539 ggggagcgttccg 551 ||||||||||||| Sbjct: 1219 ggggagcgttccg 1231
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 729 bits (368), Expect = 0.0 Identities = 375/376 (99%), Gaps = 1/376 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 473 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 532 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 533 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 592 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 652 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 653 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 712 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 772 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 832 Query: 361 ccctaaatgaccgctc 376 |||||||||||||||| Sbjct: 833 ccctaaatgaccgctc 848
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 729 bits (368), Expect = 0.0 Identities = 505/548 (92%), Gaps = 2/548 (0%) Strand = Plus / Minus Query: 6 atggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagca 64 ||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 127762 atggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaactaagtg 127703 Query: 65 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 124 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 127702 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 127643 Query: 125 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127642 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgacc 127583 Query: 185 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 243 |||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 127582 ggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgag 127523 Query: 244 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 303 |||||||||||||||||| |||||||| || ||| ||| | |||| ||||||||| Sbjct: 127522 gcaaactctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagtgaga 127463 Query: 304 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 363 |||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||| Sbjct: 127462 cgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaaggcccc 127403 Query: 364 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 423 |||||||| |||||||| |||||||||| || |||||||||||||||||||||||||||| Sbjct: 127402 taaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgccta 127343 Query: 424 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 483 ||||||||||||||| |||||||||||||||||||||||||| ||||| ||| ||| ||| Sbjct: 127342 gaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgctcttacgccgaa 127283 Query: 484 gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggga 543 ||||||||| ||||| | ||||||||||||||| ||||||||| ||||||||||||| Sbjct: 127282 aatgaacgggactaagtggtctgccgaagctgtgagatgtcaaaggacatcggtagggga 127223 Query: 544 gcgttccg 551 |||||||| Sbjct: 127222 gcgttccg 127215 Score = 729 bits (368), Expect = 0.0 Identities = 505/548 (92%), Gaps = 2/548 (0%) Strand = Plus / Plus Query: 6 atggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagca 64 ||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 95685 atggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaactaagtg 95744 Query: 65 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 124 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 95745 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 95804 Query: 125 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95805 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgacc 95864 Query: 185 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 243 |||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 95865 ggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgag 95924 Query: 244 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 303 |||||||||||||||||| |||||||| || ||| ||| | |||| ||||||||| Sbjct: 95925 gcaaactctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagtgaga 95984 Query: 304 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 363 |||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||| Sbjct: 95985 cgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaaggcccc 96044 Query: 364 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 423 |||||||| |||||||| |||||||||| || |||||||||||||||||||||||||||| Sbjct: 96045 taaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgccta 96104 Query: 424 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 483 ||||||||||||||| |||||||||||||||||||||||||| ||||| ||| ||| ||| Sbjct: 96105 gaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgctcttacgccgaa 96164 Query: 484 gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggga 543 ||||||||| ||||| | ||||||||||||||| ||||||||| ||||||||||||| Sbjct: 96165 aatgaacgggactaagtggtctgccgaagctgtgagatgtcaaaggacatcggtagggga 96224 Query: 544 gcgttccg 551 |||||||| Sbjct: 96225 gcgttccg 96232
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 702 bits (354), Expect = 0.0 Identities = 361/362 (99%), Gaps = 1/362 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 681 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 740 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 800 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 860 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 861 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 920 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 921 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 980 Query: 301 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 981 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 1040 Query: 361 cc 362 || Sbjct: 1041 cc 1042
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 656 bits (331), Expect = 0.0 Identities = 470/515 (91%), Gaps = 1/515 (0%) Strand = Plus / Minus Query: 37 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 96 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 97 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 156 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 157 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 216 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 217 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 276 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 277 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 336 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 337 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 396 ||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgataaaggaggtagggg 2753 Query: 397 tgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagc 456 ||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| Sbjct: 2752 tgcaaagacagccaggaggtttgcctagaagcaaccacccttgaaaaagtgcgtaatagc 2693 Query: 457 tcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgt 516 ||||| ||||||||| ||||| | |||||||| ||||||||||||||| |||||| | Sbjct: 2692 tcactaatcgagcgcacttgcaccaaagatgaattgggctaagcgatctgttgaagctat 2633 Query: 517 gggatgtcaaaatgcatcggtaggggagcgttccg 551 ||||||||||||||||||| ||||||||||||||| Sbjct: 2632 gggatgtcaaaatgcatcgataggggagcgttccg 2598
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 632 bits (319), Expect = e-178 Identities = 319/319 (100%) Strand = Plus / Minus Query: 233 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 293 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 353 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 340 Query: 413 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 280 Query: 473 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 220 Query: 533 tcggtaggggagcgttccg 551 ||||||||||||||||||| Sbjct: 219 tcggtaggggagcgttccg 201
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 630 bits (318), Expect = e-177 Identities = 476/525 (90%), Gaps = 4/525 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 |||||||||||||||| ||||||||||| || |||||| |||||| |||| |||||||| Sbjct: 678 gcttatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaacta 737 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 797 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 ||||||| || |||||| |||||| ||||||||||||||||||||| |||||||| |||| Sbjct: 798 aatgccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt 857 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || ||||||||||||||||||||||||||||| |||| ||| |||| ||||||||| Sbjct: 858 -accagacatctaggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaatt 916 Query: 241 gaggcaaactctgaatactagatatgacc--caaaaataacaggggtcaaggtcggccag 298 |||||||||| |||||||||||||||||| |||||||||||||| | ||||| | |||| Sbjct: 917 gaggcaaactatgaatactagatatgacctccaaaaataacagggataaaggtggaccag 976 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 |||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 977 tgagaccatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaag 1036 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 ||||||||||||||||| ||| ||||||||||| |||||||| ||||| ||||||||||| Sbjct: 1037 gcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacaaccaggaggttt 1096 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 1097 gcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgctcttgcg 1156 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 | ||| ||||| ||| ||||||| | |||||||||||||||||| Sbjct: 1157 ccgaatatgaatgggaataagcgacccgccgaagctgtgggatgt 1201
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 622 bits (314), Expect = e-175 Identities = 499/556 (89%), Gaps = 6/556 (1%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||| | Sbjct: 138593 gcttatggacccgaacccgggtgatctatccatgaccaggatgaagcttggatagaacca 138534 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 | ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 138533 ggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtga 138474 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 138473 aatgccactcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 138414 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 |||| | | | || | |||||||||||||| |||||||||||||| |||| |||||||| Sbjct: 138413 gactaggctacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaac 138354 Query: 240 cgaggcaaactctgaatactagatatgacccaaaaataacagg--ggtcaaggtcggcca 297 |||||||||||||||||||| | |||| ||| | | | ||| | ||| ||||||||||| Sbjct: 138353 cgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaaggtcggcca 138294 Query: 298 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 357 |||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 138293 gtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaa 138234 Query: 358 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 417 ||||||| ||||||||||||||| | |||||||| || |||||||||||||| ||||||| Sbjct: 138233 ggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagccgggaggtt 138174 Query: 418 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 477 |||| |||||||||||||||| |||||||||||| ||||||||||||| ||||| | ||| Sbjct: 138173 tgcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaagcgctcctgc 138114 Query: 478 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgcatcg 535 || || |||||||||| ||||||| |||||||||||||||||||||| | ||| ||||| Sbjct: 138113 gccgaggatgaacgggactaagcggtctgccgaagctgtgggatgtcgaacaatacatcg 138054 Query: 536 gtaggggagcgttccg 551 |||||||||||||||| Sbjct: 138053 gtaggggagcgttccg 138038 Score = 622 bits (314), Expect = e-175 Identities = 499/556 (89%), Gaps = 6/556 (1%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||| | Sbjct: 83284 gcttatggacccgaacccgggtgatctatccatgaccaggatgaagcttggatagaacca 83343 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 | ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 83344 ggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtga 83403 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 83404 aatgccactcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 83463 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 |||| | | | || | |||||||||||||| |||||||||||||| |||| |||||||| Sbjct: 83464 gactaggctacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaac 83523 Query: 240 cgaggcaaactctgaatactagatatgacccaaaaataacagg--ggtcaaggtcggcca 297 |||||||||||||||||||| | |||| ||| | | | ||| | ||| ||||||||||| Sbjct: 83524 cgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaaggtcggcca 83583 Query: 298 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 357 |||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 83584 gtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaa 83643 Query: 358 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 417 ||||||| ||||||||||||||| | |||||||| || |||||||||||||| ||||||| Sbjct: 83644 ggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagccgggaggtt 83703 Query: 418 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 477 |||| |||||||||||||||| |||||||||||| ||||||||||||| ||||| | ||| Sbjct: 83704 tgcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaagcgctcctgc 83763 Query: 478 gctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgcatcg 535 || || |||||||||| ||||||| |||||||||||||||||||||| | ||| ||||| Sbjct: 83764 gccgaggatgaacgggactaagcggtctgccgaagctgtgggatgtcgaacaatacatcg 83823 Query: 536 gtaggggagcgttccg 551 |||||||||||||||| Sbjct: 83824 gtaggggagcgttccg 83839
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 611 bits (308), Expect = e-171 Identities = 354/368 (96%), Gaps = 1/368 (0%) Strand = Plus / Plus Query: 184 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 243 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 244 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 303 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 304 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 364 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 423 ||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 497 taaatgatcgctcagtgataaaggaggtaggggtgc-gagacagccaggaggtttgccta 555 Query: 424 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 483 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 556 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 615 Query: 484 gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggga 543 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 616 gatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggga 675 Query: 544 gcgttccg 551 |||||||| Sbjct: 676 gcgttccg 683 Score = 289 bits (146), Expect = 5e-75 Identities = 162/166 (97%), Gaps = 1/166 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 133 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 192 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 252 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgtt 166 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 aatgccactcgaacccagagctagctggttctccccgaaatgcgtt 298
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 597 bits (301), Expect = e-167 Identities = 301/301 (100%) Strand = Plus / Plus Query: 251 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 311 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 371 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 180 Query: 431 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 240 Query: 491 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 300 Query: 551 g 551 | Sbjct: 301 g 301
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 579 bits (292), Expect = e-162 Identities = 299/300 (99%), Gaps = 1/300 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 300 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 241 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 181 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 121 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 61 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 1
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 565 bits (285), Expect = e-158 Identities = 322/333 (96%), Gaps = 1/333 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 364856 gcttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaacta 364915 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 364916 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 364975 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364976 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 365035 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 365036 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 365095 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 365096 gaggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtg 365155 Query: 301 agacgatgggggataagcttcatcgtcgagagg 333 ||||| ||||||||||||||||||||||||||| Sbjct: 365156 agacggtgggggataagcttcatcgtcgagagg 365188 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 328 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 387 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 388 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 446 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 447 gcgtaatagctcactg 462 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Minus Query: 403 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 462 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 325 gtcgagagggaaacagcccggatc 348 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 555 bits (280), Expect = e-155 Identities = 311/320 (97%), Gaps = 1/320 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 46930 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 46989 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46990 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 47049 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47050 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 47109 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 47110 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 47169 Query: 241 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 300 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 47170 gaggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtg 47229 Query: 301 agacgatgggggataagctt 320 |||||||||||||||||||| Sbjct: 47230 agacgatgggggataagctt 47249
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 496 bits (250), Expect = e-137 Identities = 459/525 (87%), Gaps = 4/525 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||| ||| || |||||||| || |||||| |||||| || | |||||||| Sbjct: 654 gcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaacta 713 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 agtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtga 773 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| Sbjct: 774 aatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt 833 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 834 -accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaatt 892 Query: 241 gaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccag 298 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| Sbjct: 893 gaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccag 952 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||| Sbjct: 953 cgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaag 1012 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 |||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||| Sbjct: 1013 gcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagttt 1072 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 ||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| | Sbjct: 1073 gcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtg 1132 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 | ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1133 ccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 496 bits (250), Expect = e-137 Identities = 459/525 (87%), Gaps = 4/525 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||| ||| || |||||||| || |||||| |||||| || | |||||||| Sbjct: 654 gcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaacta 713 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 agtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtga 773 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| Sbjct: 774 aatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt 833 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 834 -accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaatt 892 Query: 241 gaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccag 298 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| Sbjct: 893 gaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccag 952 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||| Sbjct: 953 cgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaag 1012 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 |||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||| Sbjct: 1013 gcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagttt 1072 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 ||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| | Sbjct: 1073 gcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtg 1132 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 | ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1133 ccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 496 bits (250), Expect = e-137 Identities = 459/525 (87%), Gaps = 4/525 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||| ||| || |||||||| || |||||| |||||| || | |||||||| Sbjct: 654 gcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaacta 713 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 agtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtga 773 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| Sbjct: 774 aatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt 833 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 834 -accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaatt 892 Query: 241 gaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccag 298 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| Sbjct: 893 gaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccag 952 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||| Sbjct: 953 cgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaag 1012 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 |||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||| Sbjct: 1013 gcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagttt 1072 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 ||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| | Sbjct: 1073 gcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtg 1132 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 | ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1133 ccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 496 bits (250), Expect = e-137 Identities = 459/525 (87%), Gaps = 4/525 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||| ||| || |||||||| || |||||| |||||| || | |||||||| Sbjct: 654 gcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaacta 713 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 agtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtga 773 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| Sbjct: 774 aatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt 833 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 834 -accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaatt 892 Query: 241 gaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccag 298 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| Sbjct: 893 gaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccag 952 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||| Sbjct: 953 cgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaag 1012 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 |||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||| Sbjct: 1013 gcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagttt 1072 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 ||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| | Sbjct: 1073 gcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtg 1132 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 | ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1133 ccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 496 bits (250), Expect = e-137 Identities = 459/525 (87%), Gaps = 4/525 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||| ||| || |||||||| || |||||| |||||| || | |||||||| Sbjct: 653 gcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaacta 712 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 agtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtga 772 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| Sbjct: 773 aatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt 832 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 -accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaatt 891 Query: 241 gaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccag 298 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| Sbjct: 892 gaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccag 951 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||| Sbjct: 952 cgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaag 1011 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 |||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||| Sbjct: 1012 gcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagttt 1071 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 ||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| | Sbjct: 1072 gcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtg 1131 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 | ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1132 ccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1176
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 496 bits (250), Expect = e-137 Identities = 459/525 (87%), Gaps = 4/525 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||| ||| || |||||||| || |||||| |||||| || | |||||||| Sbjct: 654 gcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaacta 713 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 agtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtga 773 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| Sbjct: 774 aatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt 833 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 834 -accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaatt 892 Query: 241 gaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccag 298 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| Sbjct: 893 gaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccag 952 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||| Sbjct: 953 cgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaag 1012 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 |||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||| Sbjct: 1013 gcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagttt 1072 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 ||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| | Sbjct: 1073 gcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtg 1132 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 | ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1133 ccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 496 bits (250), Expect = e-137 Identities = 459/525 (87%), Gaps = 4/525 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||| ||| || |||||||| || |||||| |||||| || | |||||||| Sbjct: 654 gcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaacta 713 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 agtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtga 773 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| Sbjct: 774 aatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt 833 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 834 -accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaatt 892 Query: 241 gaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccag 298 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| Sbjct: 893 gaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccag 952 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||| Sbjct: 953 cgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaag 1012 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 |||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||| Sbjct: 1013 gcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagttt 1072 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 ||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| | Sbjct: 1073 gcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtg 1132 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 | ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1133 ccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 496 bits (250), Expect = e-137 Identities = 459/525 (87%), Gaps = 4/525 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||| ||| || |||||||| || |||||| |||||| || | |||||||| Sbjct: 654 gcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaacta 713 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 agtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtga 773 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| Sbjct: 774 aatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt 833 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 834 -accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaatt 892 Query: 241 gaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccag 298 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| Sbjct: 893 gaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccag 952 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||| Sbjct: 953 cgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaag 1012 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 |||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||| Sbjct: 1013 gcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagttt 1072 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 ||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| | Sbjct: 1073 gcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtg 1132 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 | ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1133 ccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 496 bits (250), Expect = e-137 Identities = 459/525 (87%), Gaps = 4/525 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||| ||| || |||||||| || |||||| |||||| || | |||||||| Sbjct: 654 gcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaacta 713 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 agtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtga 773 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| Sbjct: 774 aatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt 833 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 834 -accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaatt 892 Query: 241 gaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccag 298 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| Sbjct: 893 gaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccag 952 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||| Sbjct: 953 cgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaag 1012 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 |||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||| Sbjct: 1013 gcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagttt 1072 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 ||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| | Sbjct: 1073 gcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtg 1132 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 | ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1133 ccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 496 bits (250), Expect = e-137 Identities = 459/525 (87%), Gaps = 4/525 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||| ||| || |||||||| || |||||| |||||| || | |||||||| Sbjct: 654 gcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaacta 713 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 agtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtga 773 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| Sbjct: 774 aatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt 833 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 834 -accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaatt 892 Query: 241 gaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccag 298 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| Sbjct: 893 gaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccag 952 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||| Sbjct: 953 cgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaag 1012 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 |||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||| Sbjct: 1013 gcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagttt 1072 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 ||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| | Sbjct: 1073 gcctagaaggagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtg 1132 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 | ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1133 ccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 488 bits (246), Expect = e-134 Identities = 458/525 (87%), Gaps = 4/525 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||| ||| || |||||||| || |||||| |||||| || | |||||||| Sbjct: 654 gcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaacta 713 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 agtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtga 773 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| Sbjct: 774 aatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt 833 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 834 -accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaatt 892 Query: 241 gaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccag 298 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| Sbjct: 893 gaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccag 952 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||| Sbjct: 953 cgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaag 1012 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 |||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||| Sbjct: 1013 gcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagttt 1072 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 ||||||||| |||||| ||||||||||||||||||||| |||||||||| || |||| | Sbjct: 1073 gcctagaagaggccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtg 1132 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 | ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1133 ccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 488 bits (246), Expect = e-134 Identities = 458/525 (87%), Gaps = 4/525 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||| ||| || |||||||| || |||||| |||||| || | |||||||| Sbjct: 653 gcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaacta 712 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 agtggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtga 772 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| Sbjct: 773 aatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt 832 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 -accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaatt 891 Query: 241 gaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccag 298 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| Sbjct: 892 gaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccag 951 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||| Sbjct: 952 cgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaag 1011 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 |||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||| Sbjct: 1012 gcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagttt 1071 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 ||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| | Sbjct: 1072 gcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtg 1131 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 | ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1132 ccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1176
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 458/525 (87%), Gaps = 4/525 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||| ||| || |||||||| || |||||| |||||| || | |||||||| Sbjct: 654 gcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaacta 713 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 agtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtga 773 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| Sbjct: 774 aatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt 833 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 834 -accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaatt 892 Query: 241 gaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccag 298 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| Sbjct: 893 gaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccag 952 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||| Sbjct: 953 cgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaag 1012 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 |||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | || Sbjct: 1013 gcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagctt 1072 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 ||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| | Sbjct: 1073 gcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtg 1132 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 | ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1133 ccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 488 bits (246), Expect = e-134 Identities = 459/525 (87%), Gaps = 5/525 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||| ||| || |||||||| || |||||| |||||| || | |||||||| Sbjct: 654 gcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaacta 713 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 agtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtga 773 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| Sbjct: 774 aatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gtt 832 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 -accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaatt 891 Query: 241 gaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccag 298 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| Sbjct: 892 gaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccag 951 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||| Sbjct: 952 cgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaag 1011 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 |||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||| Sbjct: 1012 gcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagttt 1071 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 ||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| | Sbjct: 1072 gcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtg 1131 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 | ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1132 ccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1176
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 488 bits (246), Expect = e-134 Identities = 458/525 (87%), Gaps = 4/525 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||| ||| || |||||||| || |||||| |||||| || | |||||||| Sbjct: 654 gcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaacta 713 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 agtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtga 773 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||| || ||||||||| |||||||||||||||||||||||||||| ||||| || ||| Sbjct: 774 aatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgtt 833 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 834 -accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaatt 892 Query: 241 gaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccag 298 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| Sbjct: 893 gaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccag 952 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||| Sbjct: 953 cgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaag 1012 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 |||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||| Sbjct: 1013 gcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagttt 1072 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 ||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| | Sbjct: 1073 gcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtg 1132 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 | ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1133 ccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 488 bits (246), Expect = e-134 Identities = 246/246 (100%) Strand = Plus / Minus Query: 306 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 366 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 426 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 486 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 63650 Query: 546 gttccg 551 |||||| Sbjct: 63649 gttccg 63644
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 478 bits (241), Expect = e-131 Identities = 241/241 (100%) Strand = Plus / Plus Query: 311 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 371 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 431 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 491 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 240 Query: 551 g 551 | Sbjct: 241 g 241
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 472 bits (238), Expect = e-130 Identities = 456/525 (86%), Gaps = 4/525 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||| ||| || |||||||| || |||||| |||||| || | |||||||| Sbjct: 654 gcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaacta 713 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 agtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtga 773 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 774 aatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgta 833 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 | | || ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 834 tccag-acctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaatt 892 Query: 241 gaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccag 298 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| Sbjct: 893 gaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccag 952 Query: 299 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 358 ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||||||| Sbjct: 953 cgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaag 1012 Query: 359 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 418 |||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| |||| Sbjct: 1013 gcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagttt 1072 Query: 419 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 478 ||||||||| ||||||| ||||||||||||||||||||| |||||||||| || |||| | Sbjct: 1073 gcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtg 1132 Query: 479 ctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 | ||| ||||||||| || || ||| ||||||| ||||||||| Sbjct: 1133 ccgaatatgaacgggaataggcaatccaccgaagccgtgggatgt 1177
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 450 bits (227), Expect = e-123 Identities = 259/267 (97%), Gaps = 2/267 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 4564 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 4623 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4624 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 4683 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4684 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 4743 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 4744 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 4803 Query: 240 cgaggcaaactctgaatactagatatg 266 |||||||||||||||||||||| |||| Sbjct: 4804 cgaggcaaactctgaatactaggtatg 4830 Score = 387 bits (195), Expect = e-104 Identities = 246/263 (93%) Strand = Plus / Plus Query: 289 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 348 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 349 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 408 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 409 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 468 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 4978 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 5037 Query: 469 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 528 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 5038 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 5097 Query: 529 tgcatcggtaggggagcgttccg 551 | ||||||||||||||||||||| Sbjct: 5098 tacatcggtaggggagcgttccg 5120
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 450 bits (227), Expect = e-123 Identities = 259/267 (97%), Gaps = 2/267 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 674 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 733 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 734 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 793 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 853 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 854 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 913 Query: 240 cgaggcaaactctgaatactagatatg 266 |||||||||||||||||||||| |||| Sbjct: 914 cgaggcaaactctgaatactaggtatg 940 Score = 387 bits (195), Expect = e-104 Identities = 246/263 (93%) Strand = Plus / Plus Query: 289 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 348 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 349 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 408 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 409 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 468 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 469 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 528 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 529 tgcatcggtaggggagcgttccg 551 | ||||||||||||||||||||| Sbjct: 1208 tacatcggtaggggagcgttccg 1230
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 450 bits (227), Expect = e-123 Identities = 259/267 (97%), Gaps = 2/267 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 150571 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 150512 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 150511 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 150452 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150451 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 150392 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 150391 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 150332 Query: 240 cgaggcaaactctgaatactagatatg 266 |||||||||||||||||||||| |||| Sbjct: 150331 cgaggcaaactctgaatactaggtatg 150305 Score = 450 bits (227), Expect = e-123 Identities = 259/267 (97%), Gaps = 2/267 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 118095 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 118154 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 118155 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 118214 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118215 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 118274 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 118275 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 118334 Query: 240 cgaggcaaactctgaatactagatatg 266 |||||||||||||||||||||| |||| Sbjct: 118335 cgaggcaaactctgaatactaggtatg 118361 Score = 387 bits (195), Expect = e-104 Identities = 246/263 (93%) Strand = Plus / Minus Query: 289 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 348 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 349 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 408 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 409 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 468 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 150157 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 150098 Query: 469 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 528 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 150097 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 150038 Query: 529 tgcatcggtaggggagcgttccg 551 | ||||||||||||||||||||| Sbjct: 150037 tacatcggtaggggagcgttccg 150015 Score = 387 bits (195), Expect = e-104 Identities = 246/263 (93%) Strand = Plus / Plus Query: 289 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 348 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 349 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 408 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 409 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 468 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 118509 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 118568 Query: 469 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 528 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 118569 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 118628 Query: 529 tgcatcggtaggggagcgttccg 551 | ||||||||||||||||||||| Sbjct: 118629 tacatcggtaggggagcgttccg 118651
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 450 bits (227), Expect = e-123 Identities = 259/267 (97%), Gaps = 2/267 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 674 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 733 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 734 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 793 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 853 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 854 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 913 Query: 240 cgaggcaaactctgaatactagatatg 266 |||||||||||||||||||||| |||| Sbjct: 914 cgaggcaaactctgaatactaggtatg 940 Score = 387 bits (195), Expect = e-104 Identities = 246/263 (93%) Strand = Plus / Plus Query: 289 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 348 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 349 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 408 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 409 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 468 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 469 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 528 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 529 tgcatcggtaggggagcgttccg 551 | ||||||||||||||||||||| Sbjct: 1208 tacatcggtaggggagcgttccg 1230
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 448 bits (226), Expect = e-123 Identities = 274/290 (94%) Strand = Plus / Minus Query: 262 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 321 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 322 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 381 ||| || || ||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct: 580 atcatctcgaaagaaacagcccggatccccagctaaggcccttaaatgaccgctcaatga 521 Query: 382 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 441 |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 520 taaaggaggtgggggtgcaaagccagccatgaagtttgcctagaagcagccaccctttaa 461 Query: 442 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 401 Query: 502 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 551 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 351
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 448 bits (226), Expect = e-123 Identities = 255/262 (97%), Gaps = 2/262 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 115536 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 115477 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 115476 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 115417 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115416 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 115357 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 115356 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 115297 Query: 240 cgaggcaaactctgaatactag 261 |||||||||||||||||||||| Sbjct: 115296 cgaggcaaactctgaatactag 115275 Score = 448 bits (226), Expect = e-123 Identities = 255/262 (97%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 86584 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 86643 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 86644 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 86703 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86704 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 86763 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 86764 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 86823 Query: 240 cgaggcaaactctgaatactag 261 |||||||||||||||||||||| Sbjct: 86824 cgaggcaaactctgaatactag 86845 Score = 387 bits (195), Expect = e-104 Identities = 246/263 (93%) Strand = Plus / Minus Query: 289 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 348 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 349 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 408 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 409 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 468 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 115126 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 115067 Query: 469 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 528 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 115066 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 115007 Query: 529 tgcatcggtaggggagcgttccg 551 | ||||||||||||||||||||| Sbjct: 115006 tacatcggtaggggagcgttccg 114984 Score = 387 bits (195), Expect = e-104 Identities = 246/263 (93%) Strand = Plus / Plus Query: 289 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 348 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 349 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 408 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 409 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 468 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 86994 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 87053 Query: 469 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 528 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 87054 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 87113 Query: 529 tgcatcggtaggggagcgttccg 551 | ||||||||||||||||||||| Sbjct: 87114 tacatcggtaggggagcgttccg 87136
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 438 bits (221), Expect = e-120 Identities = 255/265 (96%), Gaps = 1/265 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| Sbjct: 4903 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaacta 4962 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct: 4963 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtga 5022 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5023 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 5082 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 ||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| Sbjct: 5083 gactggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatc 5142 Query: 241 gaggcaaactctgaatactagatat 265 ||||||||||||||||||||||||| Sbjct: 5143 gaggcaaactctgaatactagatat 5167 Score = 432 bits (218), Expect = e-118 Identities = 251/262 (95%) Strand = Plus / Plus Query: 290 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 350 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 409 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301 Query: 410 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 469 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5302 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 5361 Query: 470 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 529 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 5362 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 5421 Query: 530 gcatcggtaggggagcgttccg 551 | |||||||||||||||||||| Sbjct: 5422 gaatcggtaggggagcgttccg 5443
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 438 bits (221), Expect = e-120 Identities = 255/265 (96%), Gaps = 1/265 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| Sbjct: 23022 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaacta 22963 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct: 22962 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtga 22903 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22902 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 22843 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 ||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| Sbjct: 22842 gactggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatc 22783 Query: 241 gaggcaaactctgaatactagatat 265 ||||||||||||||||||||||||| Sbjct: 22782 gaggcaaactctgaatactagatat 22758 Score = 432 bits (218), Expect = e-118 Identities = 251/262 (95%) Strand = Plus / Minus Query: 290 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 350 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 409 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624 Query: 410 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 469 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22623 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 22564 Query: 470 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 529 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 22563 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 22504 Query: 530 gcatcggtaggggagcgttccg 551 | |||||||||||||||||||| Sbjct: 22503 gaatcggtaggggagcgttccg 22482
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 434 bits (219), Expect = e-118 Identities = 259/271 (95%), Gaps = 1/271 (0%) Strand = Plus / Plus Query: 282 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 340 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 341 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 400 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 401 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 460 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 461 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 520 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 521 tgtcaaaatgcatcggtaggggagcgttccg 551 ||| |||||| |||||||||||||||||||| Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccg 5715 Score = 432 bits (218), Expect = e-118 Identities = 258/270 (95%), Gaps = 1/270 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||| || | |||||||| Sbjct: 5171 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaacta 5230 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct: 5231 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtga 5290 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5291 aatgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 5350 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 ||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| Sbjct: 5351 gactggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatc 5410 Query: 241 gaggcaaactctgaatactagatatgaccc 270 |||||||||||||||||||||||||||||| Sbjct: 5411 gaggcaaactctgaatactagatatgaccc 5440
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 434 bits (219), Expect = e-118 Identities = 259/271 (95%), Gaps = 1/271 (0%) Strand = Plus / Plus Query: 282 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 340 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 341 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 400 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 401 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 460 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 461 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 520 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 521 tgtcaaaatgcatcggtaggggagcgttccg 551 ||| |||||| |||||||||||||||||||| Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccg 5715 Score = 432 bits (218), Expect = e-118 Identities = 258/270 (95%), Gaps = 1/270 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||| || | |||||||| Sbjct: 5171 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaacta 5230 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct: 5231 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtga 5290 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5291 aatgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 5350 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 ||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||| Sbjct: 5351 gactggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatc 5410 Query: 241 gaggcaaactctgaatactagatatgaccc 270 |||||||||||||||||||||||||||||| Sbjct: 5411 gaggcaaactctgaatactagatatgaccc 5440
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 430 bits (217), Expect = e-117 Identities = 255/265 (96%), Gaps = 2/265 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 661 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 720 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 721 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 780 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 781 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcaacagtt 840 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 |||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct: 841 gactggactatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaat 900 Query: 240 cgaggcaaactctgaatactagata 264 |||||||||||||||||||| |||| Sbjct: 901 cgaggcaaactctgaatactggata 925 Score = 375 bits (189), Expect = e-100 Identities = 240/257 (93%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggag 1074 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1075 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctct 1134 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 534 ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||| Sbjct: 1135 tgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatc 1194 Query: 535 ggtaggggagcgttccg 551 ||||||||||||||||| Sbjct: 1195 ggtaggggagcgttccg 1211
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 412 bits (208), Expect = e-112 Identities = 246/256 (96%), Gaps = 2/256 (0%) Strand = Plus / Plus Query: 10 acccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagagg 68 ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| Sbjct: 144605 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 144664 Query: 69 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 128 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 144665 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 144724 Query: 129 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga- 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 144725 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagac 144784 Query: 188 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 247 |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct: 144785 catctaggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaa 144844 Query: 248 actctgaatactagat 263 |||||||||||||||| Sbjct: 144845 actctgaatactagat 144860 Score = 412 bits (208), Expect = e-112 Identities = 246/256 (96%), Gaps = 2/256 (0%) Strand = Plus / Minus Query: 10 acccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagagg 68 ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| Sbjct: 88246 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 88187 Query: 69 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 128 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 88186 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 88127 Query: 129 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga- 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 88126 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagac 88067 Query: 188 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 247 |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct: 88066 catctaggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaa 88007 Query: 248 actctgaatactagat 263 |||||||||||||||| Sbjct: 88006 actctgaatactagat 87991 Score = 383 bits (193), Expect = e-103 Identities = 241/257 (93%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 145018 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 145019 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 145078 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 534 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 145079 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 145138 Query: 535 ggtaggggagcgttccg 551 ||||||||||||||||| Sbjct: 145139 ggtaggggagcgttccg 145155 Score = 383 bits (193), Expect = e-103 Identities = 241/257 (93%) Strand = Plus / Minus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 87833 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 87832 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 87773 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 534 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 87772 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 87713 Query: 535 ggtaggggagcgttccg 551 ||||||||||||||||| Sbjct: 87712 ggtaggggagcgttccg 87696
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 402 bits (203), Expect = e-109 Identities = 224/231 (96%) Strand = Plus / Plus Query: 313 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 373 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 432 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 433 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 492 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 493 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggga 543 |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga 487
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 396 bits (200), Expect = e-107 Identities = 225/232 (96%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 202 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 261 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 321 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 322 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggtt 381 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 232 |||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 382 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggt 433
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 377 bits (190), Expect = e-101 Identities = 212/218 (97%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 198 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 257 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 317 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 318 aatgccactcgaacccagagctagctggctctccccgaaatgcgttgaggcgcagcggtt 377 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgg 218 |||||||||||||||||||||||||||||||||||||| Sbjct: 378 gactggacatctaggggtaaagcactgtttcggtgcgg 415
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 367 bits (185), Expect = 3e-98 Identities = 248/265 (93%), Gaps = 3/265 (1%) Strand = Plus / Minus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 5870 ttatggacccgaacctgggtgatctatccatgaccaggatgaagct-ggatgaaactaag 5812 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 5811 tagaggtccgaaccgactgatgttgcaaaatcagcggatgagttgtggttaggggtgaaa 5752 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5751 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 5692 Query: 183 ctgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 241 ||||| | ||||||||||||||||||||||||| ||| | | |||||||| | |||| Sbjct: 5691 ctggaccgtctaggggtaaagcactgtttcggtataggccgtgtaagcggtacgacatcg 5632 Query: 242 aggcaaactctgaatactagatatg 266 ||||||||| ||||||||||||||| Sbjct: 5631 aggcaaactatgaatactagatatg 5607 Score = 347 bits (175), Expect = 2e-92 Identities = 241/263 (91%) Strand = Plus / Minus Query: 289 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 348 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 349 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 408 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 409 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 468 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 5482 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 5423 Query: 469 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 528 ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 5422 cgctcttgcaccgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaa 5363 Query: 529 tgcatcggtaggggagcgttccg 551 ||||||||||||||||||||| Sbjct: 5362 aacatcggtaggggagcgttccg 5340
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 361 bits (182), Expect = 2e-96 Identities = 245/265 (92%), Gaps = 2/265 (0%) Strand = Plus / Plus Query: 289 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 348 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 349 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 408 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 409 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 468 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1183 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1242 Query: 469 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa-- 526 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 1243 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccatt 1302 Query: 527 aatgcatcggtaggggagcgttccg 551 | |||||||||||||||||||||| Sbjct: 1303 agggcatcggtaggggagcgttccg 1327 Score = 345 bits (174), Expect = 9e-92 Identities = 242/262 (92%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||| |||||||||| || || ||||| |||||||||| |||| | | Sbjct: 791 gcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagcca 850 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 851 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtga 910 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 911 aatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 970 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 971 gactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaat 1030 Query: 240 cgaggcaaactctgaatactag 261 |||||||||||||||||||||| Sbjct: 1031 cgaggcaaactctgaatactag 1052
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 361 bits (182), Expect = 2e-96 Identities = 245/265 (92%), Gaps = 2/265 (0%) Strand = Plus / Plus Query: 289 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 348 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 349 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 408 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 409 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 468 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1066 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1125 Query: 469 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 526 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1126 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1185 Query: 527 aatgcatcggtaggggagcgttccg 551 | |||||||||||||||||||||| Sbjct: 1186 agggcatcggtaggggagcgttccg 1210 Score = 345 bits (174), Expect = 9e-92 Identities = 242/262 (92%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||| |||||||||| || || ||||| |||||||||| |||| | | Sbjct: 674 gcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagcca 733 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 734 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtga 793 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 794 aatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 853 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 854 gactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaat 913 Query: 240 cgaggcaaactctgaatactag 261 |||||||||||||||||||||| Sbjct: 914 cgaggcaaactctgaatactag 935
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 361 bits (182), Expect = 2e-96 Identities = 245/265 (92%), Gaps = 2/265 (0%) Strand = Plus / Plus Query: 289 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 348 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 349 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 408 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 409 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 468 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1079 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1138 Query: 469 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 526 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1139 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1198 Query: 527 aatgcatcggtaggggagcgttccg 551 | |||||||||||||||||||||| Sbjct: 1199 agggcatcggtaggggagcgttccg 1223 Score = 345 bits (174), Expect = 9e-92 Identities = 242/262 (92%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||| |||||||||| || || ||||| |||||||||| |||| | | Sbjct: 687 gcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagcca 746 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 747 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtga 806 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 807 aatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 866 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 867 gactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaat 926 Query: 240 cgaggcaaactctgaatactag 261 |||||||||||||||||||||| Sbjct: 927 cgaggcaaactctgaatactag 948
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 359 bits (181), Expect = 6e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 259 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 318 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 319 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 378 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 379 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 438 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 19153009 Query: 439 taaagagtgcgtaatagctca 459 |||||||||||| ||| |||| Sbjct: 19153010 taaagagtgcgttatatctca 19153030
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 359 bits (181), Expect = 6e-96 Identities = 246/265 (92%), Gaps = 2/265 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 ||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| ||| Sbjct: 677 ttatggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaag 736 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 737 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 796 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 |||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 797 tgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaa 856 Query: 183 ctggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 241 ||| | || ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 857 atgggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcg 916 Query: 242 aggcaaactctgaatactagatatg 266 | ||||||||||||||||| ||||| Sbjct: 917 atgcaaactctgaatactaaatatg 941 Score = 262 bits (132), Expect = 1e-66 Identities = 225/256 (87%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 533 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtacat 1190 Query: 534 cggtaggggagcgttc 549 |||||||||||||||| Sbjct: 1191 cggtaggggagcgttc 1206
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 359 bits (181), Expect = 6e-96 Identities = 246/265 (92%), Gaps = 2/265 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 ||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| ||| Sbjct: 3711 ttatggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaag 3770 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3771 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 3830 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 |||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 3831 tgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaa 3890 Query: 183 ctggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 241 ||| | || ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 3891 atgggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcg 3950 Query: 242 aggcaaactctgaatactagatatg 266 | ||||||||||||||||| ||||| Sbjct: 3951 atgcaaactctgaatactaaatatg 3975 Score = 270 bits (136), Expect = 4e-69 Identities = 226/256 (88%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 4104 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 4105 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 4164 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 533 |||||| ||||||||||||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 4165 ttgcgccgaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtacat 4224 Query: 534 cggtaggggagcgttc 549 |||||||||||||||| Sbjct: 4225 cggtaggggagcgttc 4240
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 359 bits (181), Expect = 6e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 259 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 318 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 319 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 378 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 379 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 438 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 76404 Query: 439 taaagagtgcgtaatagctca 459 |||||||||||| ||| |||| Sbjct: 76405 taaagagtgcgttatatctca 76425
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 355 bits (179), Expect = 1e-94 Identities = 239/258 (92%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 1072 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1132 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgc 531 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||| | Sbjct: 1133 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagac 1192 Query: 532 atcggtaggggagcgttc 549 |||||||||||||||||| Sbjct: 1193 atcggtaggggagcgttc 1210 Score = 321 bits (162), Expect = 1e-84 Identities = 239/262 (91%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||| ||||||||||||| || |||||||||||||||| |||||| | Sbjct: 675 gcttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaaacca 734 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 735 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtga 794 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 ||| ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 795 aataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 854 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 | ||| | |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 855 aattgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaat 914 Query: 240 cgaggcaaactctgaatactag 261 |||||||||||||||||||||| Sbjct: 915 cgaggcaaactctgaatactag 936
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 355 bits (179), Expect = 1e-94 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 315 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 374 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 375 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 434 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 435 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 495 ctaagcgatctgccgaagctgtgggatgtcaaaat 529 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 355 bits (179), Expect = 1e-94 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 315 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 374 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 375 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 434 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 435 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 495 ctaagcgatctgccgaagctgtgggatgtcaaaat 529 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 351 bits (177), Expect = 2e-93 Identities = 245/265 (92%), Gaps = 2/265 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 ||||||||||||||| ||||||||||||| ||||||||||||||||||| | |||| ||| Sbjct: 677 ttatggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaag 736 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 737 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 796 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 |||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 797 tgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaa 856 Query: 183 ctggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 241 ||| | || ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 857 atgggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcg 916 Query: 242 aggcaaactctgaatactagatatg 266 | ||||||||||||||||| ||||| Sbjct: 917 atgcaaactctgaatactaaatatg 941 Score = 254 bits (128), Expect = 3e-64 Identities = 225/256 (87%), Gaps = 1/256 (0%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 533 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| ||| ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgt-ttaatacat 1189 Query: 534 cggtaggggagcgttc 549 |||||||||||||||| Sbjct: 1190 cggtaggggagcgttc 1205
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 349 bits (176), Expect = 6e-93 Identities = 247/268 (92%), Gaps = 2/268 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||| |||||||| ||||||||||| || ||||||||||||| |||| |||||||| Sbjct: 691 gcttatgtacccgaacttgggtgatctaaccatgaccaggatgaaatttggttgaaacta 750 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 751 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 810 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 ||||||| ||||||||| |||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 811 aatgccaatcgaacccaaagctagctggttctccccgaaatgcgtttaggggcagcagtt 870 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || ||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 871 -accggacatctaggggtaaagcactgtttcggtgcgggtctcgagagcggtaccaaatt 929 Query: 241 gaggcaaactctgaatactagatatgac 268 |||||||||| ||||||||||||||||| Sbjct: 930 gaggcaaactatgaatactagatatgac 957 Score = 335 bits (169), Expect = 9e-89 Identities = 235/257 (91%), Gaps = 5/257 (1%) Strand = Plus / Plus Query: 293 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 352 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 353 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 412 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccagg 1119 Query: 413 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 472 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1120 aggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgct 1179 Query: 473 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 532 ||||||| ||| ||||||||| ||||||||| |||||||||||||||||| | || Sbjct: 1180 cttgcgccgaatatgaacgggaataagcgatccgccgaagctgtgggatgtaa-----ca 1234 Query: 533 tcggtaggggagcgttc 549 ||||||||||||||||| Sbjct: 1235 tcggtaggggagcgttc 1251
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 343 bits (173), Expect = 4e-91 Identities = 215/229 (93%) Strand = Plus / Plus Query: 296 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 355 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 356 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 415 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggagg 1031 Query: 416 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 475 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1032 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1091 Query: 476 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 524 |||| ||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 1092 gcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtc 1140 Score = 319 bits (161), Expect = 5e-84 Identities = 241/265 (90%), Gaps = 2/265 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||||||| || ||||| |||| ||||| |||| | ||| Sbjct: 632 ttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggtgaagccaag 691 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 692 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaa 751 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 |||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 752 tgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattga 811 Query: 183 ctggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 241 ||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 812 ttggactacttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcg 871 Query: 242 aggcaaactctgaatactagatatg 266 |||||||||||||||||||| |||| Sbjct: 872 aggcaaactctgaatactaggtatg 896
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 341 bits (172), Expect = 1e-90 Identities = 217/232 (93%) Strand = Plus / Minus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 124193 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 124192 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 124133 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 525 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 124132 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtca 124081 Score = 341 bits (172), Expect = 1e-90 Identities = 217/232 (93%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 95673 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 95674 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 95733 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 525 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 95734 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtca 95785 Score = 305 bits (154), Expect = 8e-80 Identities = 237/262 (90%), Gaps = 2/262 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||| ||||||||||||| || |||||||||||||||| |||| | | Sbjct: 124590 gcttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagcca 124531 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 124530 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtga 124471 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 ||| ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 124470 aataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 124411 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 | ||| | |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 124410 aattgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaat 124351 Query: 240 cgaggcaaactctgaatactag 261 |||| ||||||||||||||||| Sbjct: 124350 cgagtcaaactctgaatactag 124329 Score = 305 bits (154), Expect = 8e-80 Identities = 237/262 (90%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||| ||||||||||||| || |||||||||||||||| |||| | | Sbjct: 95276 gcttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagcca 95335 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 95336 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtga 95395 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 ||| ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95396 aataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 95455 Query: 181 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 | ||| | |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 95456 aattgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaat 95515 Query: 240 cgaggcaaactctgaatactag 261 |||| ||||||||||||||||| Sbjct: 95516 cgagtcaaactctgaatactag 95537
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 337 bits (170), Expect = 2e-89 Identities = 170/170 (100%) Strand = Plus / Plus Query: 382 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 442 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 502 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 551 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 170
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 333 bits (168), Expect = 4e-88 Identities = 192/200 (96%) Strand = Plus / Minus Query: 322 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 381 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 382 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 441 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 442 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 501 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 502 atctgccgaagctgtgggat 521 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 331 bits (167), Expect = 1e-87 Identities = 238/261 (91%), Gaps = 3/261 (1%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccagga 1034 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | Sbjct: 1035 ggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1094 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat---g 530 |||||| ||||||||| ||| ||||||| ||||||||||||||| ||||| |||| Sbjct: 1095 ttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatataa 1154 Query: 531 catcggtaggggagcgttccg 551 ||||||||||||||||||||| Sbjct: 1155 catcggtaggggagcgttccg 1175 Score = 289 bits (146), Expect = 5e-75 Identities = 238/266 (89%), Gaps = 2/266 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 ||||||||||||||| ||||||||||||| || ||||||||||| |||| |||||| || Sbjct: 639 ttatggacccgaacccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaa 698 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||||| ||||||| || || |||||||| ||||| ||||||||||| Sbjct: 699 tggaggtccgaaccgactggtgttgaaaaaccaacggatgagctgtggataggggtgaaa 758 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 |||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 759 tgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttga 818 Query: 183 ctggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 241 || ||| || ||||||||||||||||||||||||||||||| | | ||||||||||| | Sbjct: 819 ctagactatttaggggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattg 878 Query: 242 aggcaaactctgaatactagatatga 267 | ||||||||||||||||| |||||| Sbjct: 879 atgcaaactctgaatactaaatatga 904
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 321 bits (162), Expect = 1e-84 Identities = 239/262 (91%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 5 tatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagc 63 |||||||||||||| |||||||||| || || |||||||||||||||| |||||||||| Sbjct: 689 tatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgaaactaagt 748 Query: 64 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 123 ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||||| Sbjct: 749 ggaggtcccaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaat 808 Query: 124 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 183 ||||||||||| | |||||||||||||||||||||||||||||||||||||||| || || Sbjct: 809 gccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaac 868 Query: 184 tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 242 ||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 869 tggactatccaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcga 928 Query: 243 ggcaaactctgaatactagata 264 | ||||||||||||||| |||| Sbjct: 929 gacaaactctgaatactggata 950 Score = 315 bits (159), Expect = 8e-83 Identities = 231/255 (90%) Strand = Plus / Plus Query: 297 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 356 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 357 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 416 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| |||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggt 1086 Query: 417 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 476 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1087 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcg 1146 Query: 477 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 536 ||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1147 cgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcgg 1206 Query: 537 taggggagcgttccg 551 ||||||||||||||| Sbjct: 1207 taggggagcgttccg 1221
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 315 bits (159), Expect = 8e-83 Identities = 231/255 (90%) Strand = Plus / Plus Query: 297 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 356 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 357 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 416 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 5124 Query: 417 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 476 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 5125 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 5184 Query: 477 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 536 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 5185 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 5244 Query: 537 taggggagcgttccg 551 ||||||||||||||| Sbjct: 5245 taggggagcgttccg 5259 Score = 295 bits (149), Expect = 8e-77 Identities = 232/257 (90%), Gaps = 2/257 (0%) Strand = Plus / Plus Query: 5 tatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagc 63 |||||||||||||| |||||||||| || || |||||||||||||||| | |||||||| Sbjct: 4727 tatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaagt 4786 Query: 64 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 123 ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||||| Sbjct: 4787 ggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaat 4846 Query: 124 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 183 ||||||||||| | |||||||||||||||||||||||||||||||||||||||| || || Sbjct: 4847 gccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaac 4906 Query: 184 tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 242 || || ||| ||||||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 4907 tgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcga 4966 Query: 243 ggcaaactctgaatact 259 ||||||||||||||||| Sbjct: 4967 ggcaaactctgaatact 4983
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 315 bits (159), Expect = 8e-83 Identities = 231/255 (90%) Strand = Plus / Plus Query: 297 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 356 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 357 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 416 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 1091 Query: 417 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 476 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 477 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 536 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 537 taggggagcgttccg 551 ||||||||||||||| Sbjct: 1212 taggggagcgttccg 1226 Score = 295 bits (149), Expect = 8e-77 Identities = 232/257 (90%), Gaps = 2/257 (0%) Strand = Plus / Plus Query: 5 tatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagc 63 |||||||||||||| |||||||||| || || |||||||||||||||| | |||||||| Sbjct: 694 tatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaagt 753 Query: 64 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 123 ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||||| Sbjct: 754 ggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaat 813 Query: 124 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 183 ||||||||||| | |||||||||||||||||||||||||||||||||||||||| || || Sbjct: 814 gccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaac 873 Query: 184 tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 242 || || ||| ||||||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 874 tgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcga 933 Query: 243 ggcaaactctgaatact 259 ||||||||||||||||| Sbjct: 934 ggcaaactctgaatact 950
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 313 bits (158), Expect = 3e-82 Identities = 206/222 (92%) Strand = Plus / Plus Query: 296 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 355 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 356 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 415 ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggagg 1477 Query: 416 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 475 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1478 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1537 Query: 476 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 517 |||| ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1538 gcgccgaaaatgaacgggactaagcggtctgccgaagctgtg 1579 Score = 305 bits (154), Expect = 8e-80 Identities = 240/266 (90%), Gaps = 2/266 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 ||||||||||||||| ||||||||||||| || ||||| |||||||||| |||| | ||| Sbjct: 1080 ttatggacccgaacccgggtgatctatccatggccagggtgaagcttgggtgaagccaag 1139 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 |||| |||||||||||| ||||||| || ||||||||||| ||||||||||||||||| Sbjct: 1140 tggaggcccgaaccgactggtgttgaaaaaccagcggatgagctgtggttaggggtgaaa 1199 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 |||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1200 tgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattga 1259 Query: 183 ctggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 241 || || | ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1260 ctaaactgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcg 1319 Query: 242 aggcaaactctgaatactagatatga 267 ||||||||||||||||||||| |||| Sbjct: 1320 aggcaaactctgaatactagacatga 1345 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 atcggtaggggagcgttccg 551 |||||||||||||||||||| Sbjct: 1601 atcggtaggggagcgttccg 1620
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 65 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 124 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 125 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 184 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 185 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 244 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 245 caaactctgaatactagatat 265 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 307 bits (155), Expect = 2e-80 Identities = 230/255 (90%) Strand = Plus / Plus Query: 297 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 356 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 357 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 416 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggt 1091 Query: 417 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 476 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 477 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 536 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 537 taggggagcgttccg 551 ||||||||||||||| Sbjct: 1212 taggggagcgttccg 1226 Score = 295 bits (149), Expect = 8e-77 Identities = 232/257 (90%), Gaps = 2/257 (0%) Strand = Plus / Plus Query: 5 tatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagc 63 |||||||||||||| |||||||||| || || |||||||||||||||| | |||||||| Sbjct: 694 tatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaagt 753 Query: 64 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 123 ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||||| Sbjct: 754 ggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaat 813 Query: 124 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 183 ||||||||||| | |||||||||||||||||||||||||||||||||||||||| || || Sbjct: 814 gccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaac 873 Query: 184 tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 242 || || ||| ||||||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 874 tgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcga 933 Query: 243 ggcaaactctgaatact 259 ||||||||||||||||| Sbjct: 934 ggcaaactctgaatact 950
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 305 bits (154), Expect = 8e-80 Identities = 161/162 (99%), Gaps = 1/162 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 75021 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 74962 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74961 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 74902 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatg 162 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 74901 aatgccactcgaacccagagctagctggttctccccgaaatg 74860 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Plus Query: 403 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 462 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 401437 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 401496 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 gtcgagagggaaacagcccggatc 348 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 305 bits (154), Expect = 8e-80 Identities = 161/162 (99%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 382517 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 382576 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382577 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 382636 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatg 162 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 382637 aatgccactcgaacccagagctagctggttctccccgaaatg 382678 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Minus Query: 403 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 462 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 282982 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 282923 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Minus Query: 403 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 462 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 154290 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 154231 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 325 gtcgagagggaaacagcccggatc 348 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 325 gtcgagagggaaacagcccggatc 348 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 305 bits (154), Expect = 8e-80 Identities = 161/162 (99%), Gaps = 1/162 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 113112 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 113053 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113052 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 112993 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatg 162 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 112992 aatgccactcgaacccagagctagctggttctccccgaaatg 112951 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Plus Query: 403 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 462 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 294071 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 294130 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 gtcgagagggaaacagcccggatc 348 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 305 bits (154), Expect = 8e-80 Identities = 164/166 (98%), Gaps = 1/166 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 367794 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 367735 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367734 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 367675 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgtt 166 ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 367674 aatgccactcgaacccagagctagctggttctccccgaaattcgtt 367629 Score = 305 bits (154), Expect = 8e-80 Identities = 164/166 (98%), Gaps = 1/166 (0%) Strand = Plus / Minus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 184399 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 184340 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184339 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 184280 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgtt 166 ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 184279 aatgccactcgaacccagagctagctggttctccccgaaattcgtt 184234 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Plus Query: 403 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 462 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 266906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 266965 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 gtcgagagggaaacagcccggatc 348 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 303 bits (153), Expect = 3e-79 Identities = 238/263 (90%), Gaps = 5/263 (1%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 ||||||||||||||| |||||||||| || ||||||||||||||||||| | |||| ||| Sbjct: 680 ttatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 739 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 740 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaa 799 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 ||||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 800 tgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttga 859 Query: 183 c---tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 238 | ||| | |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 860 cgaatgggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 919 Query: 239 tcgaggcaaactctgaatactag 261 ||| ||||||| ||||||||| Sbjct: 920 tcgtagcaaactaagaatactag 942 Score = 268 bits (135), Expect = 2e-68 Identities = 201/223 (90%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||||||||| ||||| |||||||||||||||| | ||| | ||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggag 1079 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 1080 gtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttct 1139 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 517 ||||| ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1140 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 atcggtaggggagcgttccg 551 |||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccg 1234
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 295 bits (149), Expect = 8e-77 Identities = 165/169 (97%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 647 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 706 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 707 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 766 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 169 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgag 815
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 293 bits (148), Expect = 3e-76 Identities = 170/176 (96%), Gaps = 1/176 (0%) Strand = Plus / Plus Query: 376 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 435 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 436 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 495 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 496 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 551 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccg 175
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 291 bits (147), Expect = 1e-75 Identities = 207/227 (91%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggag 1085 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1086 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1145 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1146 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 266 bits (134), Expect = 7e-68 Identities = 233/264 (88%), Gaps = 4/264 (1%) Strand = Plus / Plus Query: 3 cttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaa 61 |||||||||||||||| |||||||||| || || |||||||||||||||| | |||| || Sbjct: 687 cttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaa 746 Query: 62 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 121 | || |||||||||||| ||||||||| |||| ||||||||| |||||||||||||||| Sbjct: 747 gtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaa 806 Query: 122 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt-- 179 |||||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 807 atgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 866 Query: 180 -tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 238 ||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 867 atgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 926 Query: 239 tcgaggcaaactctgaatactaga 262 ||| ||||||| |||||||||| Sbjct: 927 tcgtagcaaactaagaatactaga 950 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 atcggtaggggagcgttccg 551 |||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccg 1261
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 289 bits (146), Expect = 5e-75 Identities = 231/257 (89%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || || |||||||||||||| | ||||||| || || Sbjct: 680 gacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaactcagtggaa 739 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 740 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 799 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact--g 185 |||||| | ||||||||||||||||||||||||||||||||||||||| |||| | | Sbjct: 800 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagg 859 Query: 186 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 245 | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 860 gctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgc 919 Query: 246 aaactctgaatactaga 262 ||||||||||||||||| Sbjct: 920 aaactctgaatactaga 936 Score = 274 bits (138), Expect = 3e-70 Identities = 207/230 (90%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 1071 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1072 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 1131 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 524 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 1132 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtc 1181
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 289 bits (146), Expect = 5e-75 Identities = 231/257 (89%), Gaps = 3/257 (1%) Strand = Plus / Minus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || || |||||||||||||| | ||||||| || || Sbjct: 114982 gacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaactcagtggaa 114923 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 114922 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 114863 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact--g 185 |||||| | ||||||||||||||||||||||||||||||||||||||| |||| | | Sbjct: 114862 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagg 114803 Query: 186 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 245 | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 114802 gctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgc 114743 Query: 246 aaactctgaatactaga 262 ||||||||||||||||| Sbjct: 114742 aaactctgaatactaga 114726 Score = 289 bits (146), Expect = 5e-75 Identities = 231/257 (89%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || || |||||||||||||| | ||||||| || || Sbjct: 87006 gacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaactcagtggaa 87065 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 87066 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 87125 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact--g 185 |||||| | ||||||||||||||||||||||||||||||||||||||| |||| | | Sbjct: 87126 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagg 87185 Query: 186 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 245 | ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 87186 gctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgc 87245 Query: 246 aaactctgaatactaga 262 ||||||||||||||||| Sbjct: 87246 aaactctgaatactaga 87262 Score = 274 bits (138), Expect = 3e-70 Identities = 207/230 (90%) Strand = Plus / Minus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 114591 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 114590 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 114531 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 524 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 114530 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtc 114481 Score = 274 bits (138), Expect = 3e-70 Identities = 207/230 (90%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 87397 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 87398 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 87457 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 524 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 87458 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtc 87507
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 285 bits (144), Expect = 8e-74 Identities = 144/144 (100%) Strand = Plus / Minus Query: 408 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 468 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 528 atgcatcggtaggggagcgttccg 551 |||||||||||||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgttccg 20727
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 283 bits (143), Expect = 3e-73 Identities = 236/263 (89%), Gaps = 3/263 (1%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || ||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 186 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 187 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 245 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 246 aaactctgaatactagatatgac 268 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 297 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 356 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 357 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 416 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 6706 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 6765 Query: 417 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 462 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 6766 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 6811
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 283 bits (143), Expect = 3e-73 Identities = 236/263 (89%), Gaps = 3/263 (1%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || ||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 186 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 187 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 245 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 246 aaactctgaatactagatatgac 268 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 297 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 356 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 357 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 416 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 3769 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 3828 Query: 417 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 462 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 3829 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 3874
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 283 bits (143), Expect = 3e-73 Identities = 236/263 (89%), Gaps = 3/263 (1%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || ||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 186 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 187 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 245 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 246 aaactctgaatactagatatgac 268 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 297 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 356 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 357 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 416 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 1057 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 1116 Query: 417 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 462 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 1117 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 1162
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 283 bits (143), Expect = 3e-73 Identities = 235/262 (89%), Gaps = 4/262 (1%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 ||||||||||||||| |||||||||| || ||||||||||||||||||| | |||| ||| Sbjct: 744 ttatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 803 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 || |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 804 tggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaa 863 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 864 tgccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttga 923 Query: 183 --ctg-gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 || | ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 924 tgttgagctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 983 Query: 240 cgaggcaaactctgaatactag 261 || ||||||| ||||||||| Sbjct: 984 cgtagcaaactaagaatactag 1005 Score = 224 bits (113), Expect = 2e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1142 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1143 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1202 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 519 ||||| ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1203 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtggg 1247
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 280 bits (141), Expect = 5e-72 Identities = 236/264 (89%), Gaps = 4/264 (1%) Strand = Plus / Plus Query: 3 cttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaa 61 |||||||||||||||| |||||||||| || || |||||||||||||||| | |||| || Sbjct: 810 cttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaa 869 Query: 62 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 121 | ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 870 gtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 929 Query: 122 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 181 |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 930 atgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggcgcagcggtta 989 Query: 182 ac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 238 || ||| | ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 990 acgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 1049 Query: 239 tcgaggcaaactctgaatactaga 262 ||| ||||||| |||||||||| Sbjct: 1050 tcgtagcaaactaagaatactaga 1073 Score = 248 bits (125), Expect = 2e-62 Identities = 200/225 (88%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| || Sbjct: 1150 taaggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaag 1209 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1210 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttct 1269 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 519 ||||| ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1270 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 278 bits (140), Expect = 2e-71 Identities = 238/268 (88%), Gaps = 2/268 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 |||| ||||||||||| ||||||||||| || ||||||||||| | |||| | |||||| Sbjct: 666 gcttgtggacccgaacttgggtgatctaaccatgaccaggatgcaatttggttaaaacta 725 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || | |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 726 agtgggggtctgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 785 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 180 ||||||| ||||||||| ||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 786 aatgccaatcgaacccaaagctagctggttcgccccgaaatgcatttaggcgcagcagtt 845 Query: 181 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || || ||||||||||||||||| ||||| |||||||| || |||||||||||||| Sbjct: 846 -accgggcatctaggggtaaagcattgttttggtgcgggtcacgagagcggtaccaaatt 904 Query: 241 gaggcaaactctgaatactagatatgac 268 |||||| ||| ||||||||||||||||| Sbjct: 905 gaggcagactatgaatactagatatgac 932 Score = 196 bits (99), Expect = 5e-47 Identities = 235/279 (84%), Gaps = 6/279 (2%) Strand = Plus / Plus Query: 271 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 330 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 331 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 390 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 391 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 450 | ||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 1064 t-agggtgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgcat 1122 Query: 451 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 510 ||||||| ||||| | || ||||| | ||| ||||||| | |||| |||| | ||| Sbjct: 1123 aatagctaactgacaaacagctcttgcaccgaaaatgaacgagaataagagatccgtcga 1182 Query: 511 agctgtgggatgtcaaaatgcatcggtaggggagcgttc 549 ||||||||||||| |||||||||||||||||||| Sbjct: 1183 agctgtgggatgt-----agcatcggtaggggagcgttc 1216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 276 bits (139), Expect = 7e-71 Identities = 235/263 (89%), Gaps = 3/263 (1%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 ||||||||||||||| |||||||||| || ||||||||||||||||| | | |||| || Sbjct: 826 ttatggacccgaacccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggag 885 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 || |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 886 tggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaa 945 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 ||||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 946 tgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaa 1005 Query: 183 c-tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 | ||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1006 cgtgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 1065 Query: 241 gaggcaaactctgaatactagat 263 | ||||||| ||||||||||| Sbjct: 1066 gtagcaaactaagaatactagat 1088 Score = 268 bits (135), Expect = 2e-68 Identities = 204/227 (89%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggag 1222 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| || Sbjct: 1223 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttct 1282 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1283 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 atcggtaggggagcgttccg 551 |||||||||||||||||||| Sbjct: 1410 atcggtaggggagcgttccg 1429
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 274 bits (138), Expect = 3e-70 Identities = 231/261 (88%), Gaps = 2/261 (0%) Strand = Plus / Plus Query: 291 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 350 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 351 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 410 ||||||||||||| |||| |||||||||||||||||| ||| | |||| ||||| ||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaacca 1067 Query: 411 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 470 |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1068 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcg 1127 Query: 471 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 530 | ||||||| ||| ||||||||| ||||||| |||||||||||||| |||| || Sbjct: 1128 ctcttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtgagatggtgaa--t 1185 Query: 531 catcggtaggggagcgttccg 551 ||||||||||||||||||||| Sbjct: 1186 catcggtaggggagcgttccg 1206 Score = 218 bits (110), Expect = 1e-53 Identities = 223/258 (86%), Gaps = 7/258 (2%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || || |||||| ||||||||| |||||| | || Sbjct: 676 gacccgaacccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaa 735 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 |||||||||||| || |||||||| || |||||||||||||||||||||||||||| ||| Sbjct: 736 gtccgaaccgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaatacca 795 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga----- 182 |||||| | ||||||||||||||||||||||||||||||||||||||| || || Sbjct: 796 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaag 855 Query: 183 ctggaca-tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 241 ||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 atgggcagtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 242 aggcaaactctgaatact 259 ||||||| ||||||| Sbjct: 916 tagcaaactaagaatact 933
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 272 bits (137), Expect = 1e-69 Identities = 203/225 (90%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccagga 688 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 |||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 689 ggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctc 748 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 518 ||||| ||| |||||||||||||||||| ||||||||||||||| Sbjct: 749 ctgcgccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 202 bits (102), Expect = 9e-49 Identities = 157/174 (90%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || || |||||||||||||||| | |||| ||| ||| Sbjct: 303 gacccgaacccgggtgatctaaccatgtccaggatgaagcttgggtaaaaccaagtggag 362 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 |||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||||| Sbjct: 363 gtccgaaccgaccgatgttgaaaaatcggcggatgaggtgtggttaggggtgaaatgcca 422 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 181 |||||||| ||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 423 atcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 194 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 253 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 254 aatac 258 ||||| Sbjct: 550 aatac 554
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 268 bits (135), Expect = 2e-68 Identities = 230/259 (88%), Gaps = 2/259 (0%) Strand = Plus / Minus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| |||||||||| || || ||||| |||||||||| | |||||||| Sbjct: 114754 ttatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaag 114695 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 |||| |||||| || | |||||||| ||| | |||||||||||||||||||||||||| Sbjct: 114694 tggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaa 114635 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 ||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 114634 tgccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttga 114575 Query: 183 ctggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 241 | | | ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 114574 gattataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 114515 Query: 242 aggcaaactctgaatacta 260 ||||||||||||||||||| Sbjct: 114514 aggcaaactctgaatacta 114496 Score = 268 bits (135), Expect = 2e-68 Identities = 230/259 (88%), Gaps = 2/259 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| |||||||||| || || ||||| |||||||||| | |||||||| Sbjct: 2763 ttatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaag 2822 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 |||| |||||| || | |||||||| ||| | |||||||||||||||||||||||||| Sbjct: 2823 tggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaa 2882 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 ||||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 2883 tgccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttga 2942 Query: 183 ctggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 241 | | | ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2943 gattataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 3002 Query: 242 aggcaaactctgaatacta 260 ||||||||||||||||||| Sbjct: 3003 aggcaaactctgaatacta 3021 Score = 202 bits (102), Expect = 9e-49 Identities = 198/230 (86%) Strand = Plus / Minus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 114423 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 114364 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 114363 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 114304 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 114303 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 202 bits (102), Expect = 9e-49 Identities = 198/230 (86%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 3094 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 3153 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 3154 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 3213 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 3214 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 3263 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 catcggtaggggagcgttccg 551 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 catcggtaggggagcgttccg 551 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 266 bits (134), Expect = 7e-68 Identities = 229/258 (88%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || ||||||||||||||||||| ||| || ||| || Sbjct: 674 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaag 733 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 734 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 793 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 186 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 794 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataagg 853 Query: 187 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 246 | ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 854 ctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggca 913 Query: 247 aactctgaatactagata 264 |||||||||||||||||| Sbjct: 914 aactctgaatactagata 931 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 1063 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 1064 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 1123 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1124 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 266 bits (134), Expect = 7e-68 Identities = 229/258 (88%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || ||||||||||||||||||| ||| || ||| || Sbjct: 25483 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaag 25542 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 25543 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 25602 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 186 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 25603 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataagg 25662 Query: 187 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 246 | ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 25663 ctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggca 25722 Query: 247 aactctgaatactagata 264 |||||||||||||||||| Sbjct: 25723 aactctgaatactagata 25740 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 25872 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 25873 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 25932 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25933 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 264 bits (133), Expect = 3e-67 Identities = 228/257 (88%), Gaps = 2/257 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| || ||||||| || || ||||| |||||||| | | | |||||| Sbjct: 189600 ttatagacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaag 189659 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 189660 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggctaggggtgaaa 189719 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 ||||| ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 189720 tgccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttga 189779 Query: 183 ctggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 241 ||| | ||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 189780 tgcttaatcttgggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 189839 Query: 242 aggcaaactctgaatac 258 ||||||||||||||||| Sbjct: 189840 aggcaaactctgaatac 189856 Score = 264 bits (133), Expect = 3e-67 Identities = 228/257 (88%), Gaps = 2/257 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| || ||||||| || || ||||| |||||||| | | | |||||| Sbjct: 151027 ttatagacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaag 151086 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 151087 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggctaggggtgaaa 151146 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 ||||| ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 151147 tgccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttga 151206 Query: 183 ctggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 241 ||| | ||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 151207 tgcttaatcttgggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 151266 Query: 242 aggcaaactctgaatac 258 ||||||||||||||||| Sbjct: 151267 aggcaaactctgaatac 151283 Score = 222 bits (112), Expect = 9e-55 Identities = 220/255 (86%), Gaps = 2/255 (0%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 189991 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 189992 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 190051 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 534 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 190052 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 190109 Query: 535 ggtaggggagcgttc 549 ||||||||||||||| Sbjct: 190110 ggtaggggagcgttc 190124 Score = 222 bits (112), Expect = 9e-55 Identities = 220/255 (86%), Gaps = 2/255 (0%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 151418 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 151419 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 151478 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 534 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 151479 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 151536 Query: 535 ggtaggggagcgttc 549 ||||||||||||||| Sbjct: 151537 ggtaggggagcgttc 151551
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 262 bits (132), Expect = 1e-66 Identities = 201/224 (89%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccagga 1063 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1064 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 1123 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 517 | |||| ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1124 tcgcgccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167 Score = 198 bits (100), Expect = 1e-47 Identities = 158/176 (89%), Gaps = 1/176 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||| |||||||||| || ||||||||||||||||| | ||| | Sbjct: 667 gcttatggacccgaacccgggtgatctaaccatgaccaggatgaagcttcagtaaaatga 726 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || ||||||||||||||| ||||||||| |||| || |||||||||||||||||||||| Sbjct: 727 agtggaggtccgaaccgaccgatgttgaaaaatcggctgatgagttgtggttaggggtga 786 Query: 121 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 787 aatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 842 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 189 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 248 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 249 ctctgaatactagata 264 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 260 bits (131), Expect = 4e-66 Identities = 230/261 (88%), Gaps = 4/261 (1%) Strand = Plus / Plus Query: 3 cttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaa 61 ||||||||||||||||||||||||||| || |||||||| |||||||||| | |||| || Sbjct: 656 cttatggacccgaacctgggtgatctaaccatgaccagggtgaagcttgggtaaaaccaa 715 Query: 62 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 121 | || | ||||||| |||||||||||| |||||| ||||||||||||||||| |||||| Sbjct: 716 gtggaagcccgaacccactgatgttgaaaaatcaggggatgagttgtggttagcggtgaa 775 Query: 122 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc---ag 178 |||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 776 atgccaatcgaactcagagctagctggatctccccgaaatgcgttgaggcgcagcggttg 835 Query: 179 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 238 |||| || | || |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 836 ttgatgggtcgtcaaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaa 895 Query: 239 tcgaggcaaactctgaatact 259 ||| |||||||| ||||||| Sbjct: 896 tcgtggcaaactaagaatact 916 Score = 192 bits (97), Expect = 8e-46 Identities = 217/257 (84%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 |||||||||||||| | || |||| |||||||||| | ||| ||||| |||| || Sbjct: 995 taaggcccctaaataatttctaagtgggaaaggaggtgagaatgctgagacaaccagaag 1054 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 1055 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggttaagcgtttt 1114 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 534 ||||| ||| ||| |||| ||||| || ||||||||||||||||| || || ||| Sbjct: 1115 tgcgccgaaaatgctcgggactaagaaatttgccgaagctgtgggatatcgtaagatatc 1174 Query: 535 ggtaggggagcgttccg 551 ||||||||||||||||| Sbjct: 1175 ggtaggggagcgttccg 1191
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 256 bits (129), Expect = 7e-65 Identities = 227/257 (88%), Gaps = 2/257 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| |||||||||| || || |||||||||||||||| | | || ||| Sbjct: 295 ttatagacccgaacccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaag 354 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 355 tggaggtccgaaccgactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaa 414 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 ||||| |||||||| ||||||||||||||||||||||||| ||| ||||||||| || Sbjct: 415 tgccaatcgaacccggagctagctggttctccccgaaatgtgtttaggcgcagcggtaac 474 Query: 183 ctggacatctag-gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 241 | |||||| |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 475 gattaaatctagggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 534 Query: 242 aggcaaactctgaatac 258 || ||||||| |||||| Sbjct: 535 agacaaactcagaatac 551 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 518 | ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcattctaccgaagctgtgg 789
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 256 bits (129), Expect = 7e-65 Identities = 230/260 (88%), Gaps = 4/260 (1%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||||| |||||||| || ||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 183 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 240 cgaggcaaactctgaatact 259 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 206 bits (104), Expect = 6e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 1084 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 462 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 256 bits (129), Expect = 7e-65 Identities = 230/260 (88%), Gaps = 4/260 (1%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||||| |||||||| || ||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 183 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 240 cgaggcaaactctgaatact 259 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 206 bits (104), Expect = 6e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 2822 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 462 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 256 bits (129), Expect = 7e-65 Identities = 230/260 (88%), Gaps = 4/260 (1%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| || ||||||| || || ||||| |||||||| | | | |||||| Sbjct: 188677 ttatagacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaag 188736 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 |||||||||||||||| |||||||| ||| |||||||||||||||| ||||||||||| Sbjct: 188737 tggaggtccgaaccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaa 188796 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 ||||| ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 188797 tgccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttga 188856 Query: 183 --ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || | | ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 188857 tgct-taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 188915 Query: 241 gaggcaaactctgaatacta 260 |||||||||||||||||||| Sbjct: 188916 gaggcaaactctgaatacta 188935 Score = 248 bits (125), Expect = 2e-62 Identities = 229/260 (88%), Gaps = 4/260 (1%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| || ||||||| || || ||||| |||||||| | | | |||||| Sbjct: 150234 ttatagacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaag 150293 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||| |||||| |||||||| ||| |||||||||||||||| ||||||||||| Sbjct: 150294 tggaggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaa 150353 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 ||||| ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 150354 tgccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttga 150413 Query: 183 --ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 240 || | | ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 150414 tgct-taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 150472 Query: 241 gaggcaaactctgaatacta 260 |||||||||||||||||||| Sbjct: 150473 gaggcaaactctgaatacta 150492 Score = 194 bits (98), Expect = 2e-46 Identities = 215/253 (84%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 297 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 356 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 357 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 416 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 189011 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 189070 Query: 417 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 476 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 189071 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 189130 Query: 477 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 536 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 189131 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 189188 Query: 537 taggggagcgttc 549 ||||||||||||| Sbjct: 189189 taggggagcgttc 189201 Score = 194 bits (98), Expect = 2e-46 Identities = 215/253 (84%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 297 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 356 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 357 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 416 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 150568 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 150627 Query: 417 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 476 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 150628 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 150687 Query: 477 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 536 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 150688 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 150745 Query: 537 taggggagcgttc 549 ||||||||||||| Sbjct: 150746 taggggagcgttc 150758
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 256 bits (129), Expect = 7e-65 Identities = 226/257 (87%), Gaps = 1/257 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatcta-tcctgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| || ||||||| || || |||||||||||||| | | | ||| || Sbjct: 2234 ttatagacccgaacccggatgatctagtcatggccaggatgaagcttaggtaacactgag 2293 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 2294 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaaa 2353 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 ||||| ||||| || ||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 2354 tgccaatcgaatccggagctagctggttctccccgaaatgcgttgaggcgcagcggttaa 2413 Query: 183 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 242 | | | ||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2414 atttaagcttgggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcga 2473 Query: 243 ggcaaactctgaatact 259 |||||||||||||||| Sbjct: 2474 tgcaaactctgaatact 2490 Score = 236 bits (119), Expect = 6e-59 Identities = 200/227 (88%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| ||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggag 2624 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2625 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 2684 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 ||||| ||| ||||||||| |||||| || ||||||||||||||||| Sbjct: 2685 tgcgccgaaaatgaacgggactaagcaatttgccgaagctgtgggat 2731
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 252 bits (127), Expect = 1e-63 Identities = 227/259 (87%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| || || | | Sbjct: 954 gccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcgg 1013 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 ||||||||||||||||| || |||||||||||||||| | |||| ||||| |||||| Sbjct: 1014 ctaaggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccagga 1073 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1074 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 1133 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg-ca 532 |||||| ||| ||||||||| ||||| |||||||||||||||||||| ||| || | Sbjct: 1134 ttgcgccgaaaatgaacgggactaagtaatctgccgaagctgtgggataacaatttgtta 1193 Query: 533 tcggtaggggagcgttccg 551 ||||||||||||||||||| Sbjct: 1194 tcggtaggggagcgttccg 1212 Score = 216 bits (109), Expect = 6e-53 Identities = 224/259 (86%), Gaps = 5/259 (1%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcct-gaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || | ||||||||| ||||| | | |||||| ||| Sbjct: 683 gacccgaacccgggtgatctaaccgcggtcaggatgaaacttgggtaagactaagtggag 742 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 |||||||||||| ||||||||| |||| |||||||| |||||||||||||||||||||| Sbjct: 743 gtccgaaccgaccgatgttgaaaaatcggcggatgaactgtggttaggggtgaaatgcca 802 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gact 184 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || | Sbjct: 803 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgatt 862 Query: 185 ggaca-tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 243 | | |||||||||| |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 863 aggctgtctaggggtagagcactgtctcggtgcgggctgcgagagcggtaccaaatcgta 922 Query: 244 gcaaactctgaatactaga 262 |||||||| |||||||||| Sbjct: 923 gcaaactccgaatactaga 941
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 252 bits (127), Expect = 1e-63 Identities = 228/259 (88%), Gaps = 2/259 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| |||||||||| || || ||||| |||||||| | | ||||||| Sbjct: 2494 ttatagacccgaacccgggtgatctaaccatggccagggtgaagcttaggtaaaactaaa 2553 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 |||| ||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 2554 tggaggcccgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaa 2613 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2614 tgccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttga 2673 Query: 183 -ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 241 | || |||||||||||||||||||||||||||||| || ||| |||||||||||| Sbjct: 2674 tgttataatttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcg 2733 Query: 242 aggcaaactctgaatacta 260 ||||||||||||||||||| Sbjct: 2734 aggcaaactctgaatacta 2752 Score = 184 bits (93), Expect = 2e-43 Identities = 186/217 (85%) Strand = Plus / Plus Query: 307 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 366 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 367 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 426 || | ||| |||| ||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtggaagtgcttagacaaccaggaggtttgcttagaa 2897 Query: 427 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 486 ||||| | |||||||||||||||||||||||||||| || ||||| ||||| ||| || Sbjct: 2898 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgcttctgcgccgaaaat 2957 Query: 487 gaacggggctaagcgatctgccgaagctgtgggatgt 523 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 2958 gaatgggactaagctatttgccgaagctgtgggatgt 2994 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 catcggtaggggagcgttccg 551 ||||||||||||||||||||| Sbjct: 3019 catcggtaggggagcgttccg 3039
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Minus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 170531 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 170472 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 170471 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 170412 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 170411 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 170352 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 516 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170351 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 122395 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 122454 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 122455 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 122514 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 122515 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 122574 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 516 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122575 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 168 bits (85), Expect = 1e-38 Identities = 149/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Minus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || ||||||||||||||||||| | | || | || Sbjct: 170823 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaacaccttgtggaa 170764 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 | |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 170763 gaccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 170704 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 |||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 170703 atcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagc 170655 Score = 168 bits (85), Expect = 1e-38 Identities = 149/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || ||||||||||||||||||| | | || | || Sbjct: 122103 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaacaccttgtggaa 122162 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 | |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 122163 gaccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 122222 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 |||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 122223 atcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagc 122271 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 193 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 252 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 170617 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 170558 Query: 253 gaatact 259 ||||||| Sbjct: 170557 gaatact 170551 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 193 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 252 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 122309 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 122368 Query: 253 gaatact 259 ||||||| Sbjct: 122369 gaatact 122375
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 2649 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 2708 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| | | || |||||||||||||||||| ||||| ||||| | |||| Sbjct: 2709 ctaaggtccccaaatcatcactaagtgataaaggaggtgggagtgcacagacaactagga 2768 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 2769 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 2828 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 533 ||||| ||| ||||||||||||||| ||| | ||||||||||||||| |||| || Sbjct: 2829 ctgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggattaagaaattaat 2888 Query: 534 cggtaggggagcgttccg 551 |||||||||||||||||| Sbjct: 2889 cggtaggggagcgttccg 2906 Score = 202 bits (102), Expect = 9e-49 Identities = 157/174 (90%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||| || || |||||||||||||||| | | || ||| Sbjct: 2378 ttatagacccgaaccctggtgatctaaccatggccaggatgaagcttgggtaacaccaag 2437 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2438 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2497 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 2498 tgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 2551 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 194 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 253 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2570 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2629 Query: 254 aatac 258 ||||| Sbjct: 2630 aatac 2634
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 986 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 1045 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 1046 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 1105 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 1106 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctct 1165 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 516 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1166 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 168 bits (85), Expect = 1e-38 Identities = 149/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || ||||||||||||||||||| | | || | || Sbjct: 694 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaacaccttgtggaa 753 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 | |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 754 gaccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 813 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 |||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 814 atcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagc 862 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 193 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 252 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 900 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 959 Query: 253 gaatact 259 ||||||| Sbjct: 960 gaatact 966
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 4e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 65 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 124 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 125 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 184 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 185 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 241 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 242 aggcaaactctgaatactag 261 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 192 bits (97), Expect = 8e-46 Identities = 220/257 (85%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 353 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 ||||||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| | Sbjct: 1013 ctaaggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaa 1072 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1132 Query: 474 ttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgca 532 | |||| ||| ||||| ||| || ||| |||||||||||| |||| |||| ||| | || Sbjct: 1133 tggcgccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt-aaattaca 1191 Query: 533 tcggtaggggagcgttc 549 | ||||||||||||||| Sbjct: 1192 tgggtaggggagcgttc 1208
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 248 bits (125), Expect = 2e-62 Identities = 201/225 (89%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| ||||||| ||| |||||||||||||||| | ||||| |||| |||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccagga 686 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 687 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 746 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 518 || ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 747 tt-cgccgaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 202 bits (102), Expect = 9e-49 Identities = 157/174 (90%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| |||||||||| || || |||||||||||||||| | | || ||| Sbjct: 296 ttatagacccgaacccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaag 355 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 356 tggaggtccgaaccgactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaa 415 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| |||||||| ||||||||||||||||||||||||| |||||||| |||| Sbjct: 416 tgccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcacagc 469 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 194 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 253 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 254 aatac 258 ||||| Sbjct: 548 aatac 552
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 186 bits (94), Expect = 5e-44 Identities = 155/174 (89%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||| || || |||||||||||||||| | | || ||| Sbjct: 295 ttatagacccgaaccctggtgatctaaccatggccaggatgaagcttgggtaacaccaag 354 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 355 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaa 414 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 415 tgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 468 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 194 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 253 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 254 aatac 258 ||||| Sbjct: 547 aatac 551
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5434418 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5434359 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5434358 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5434299 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5434298 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5434239 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434238 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 3897020 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 3897079 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 3897080 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 3897139 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 3897140 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 3897199 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897200 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2807139 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2807080 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2807079 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2807020 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2807019 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2806960 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806959 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 1005863 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 1005922 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 1005923 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 1005982 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 1005983 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 1006042 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006043 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 186 bits (94), Expect = 5e-44 Identities = 155/174 (89%), Gaps = 1/174 (0%) Strand = Plus / Minus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||| || || |||||||||||||||| | | || ||| Sbjct: 5434689 ttatagacccgaaccctggtgatctaaccatggccaggatgaagcttgggtaacaccaag 5434630 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 5434629 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaa 5434570 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 5434569 tgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 5434516 Score = 186 bits (94), Expect = 5e-44 Identities = 155/174 (89%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||| || || |||||||||||||||| | | || ||| Sbjct: 3896749 ttatagacccgaaccctggtgatctaaccatggccaggatgaagcttgggtaacaccaag 3896808 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 3896809 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaa 3896868 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 3896869 tgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 3896922 Score = 186 bits (94), Expect = 5e-44 Identities = 155/174 (89%), Gaps = 1/174 (0%) Strand = Plus / Minus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||| || || |||||||||||||||| | | || ||| Sbjct: 2807410 ttatagacccgaaccctggtgatctaaccatggccaggatgaagcttgggtaacaccaag 2807351 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 2807350 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaa 2807291 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 2807290 tgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 2807237 Score = 186 bits (94), Expect = 5e-44 Identities = 155/174 (89%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||| || || |||||||||||||||| | | || ||| Sbjct: 1005592 ttatagacccgaaccctggtgatctaaccatggccaggatgaagcttgggtaacaccaag 1005651 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 1005652 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaa 1005711 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 1005712 tgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 1005765 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 194 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 253 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5434497 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5434438 Query: 254 aatac 258 ||||| Sbjct: 5434437 aatac 5434433 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 194 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 253 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 3896941 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 3897000 Query: 254 aatac 258 ||||| Sbjct: 3897001 aatac 3897005 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 194 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 253 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2807218 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2807159 Query: 254 aatac 258 ||||| Sbjct: 2807158 aatac 2807154 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 194 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 253 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 1005784 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 1005843 Query: 254 aatac 258 ||||| Sbjct: 1005844 aatac 1005848
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 246 bits (124), Expect = 6e-62 Identities = 226/258 (87%), Gaps = 4/258 (1%) Strand = Plus / Plus Query: 8 ggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcaga 66 ||||||||||| |||||||||| || || |||||||||||||||| | |||| ||| || Sbjct: 658 ggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaagtgga 717 Query: 67 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 126 ||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||||||| Sbjct: 718 ggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatgcc 777 Query: 127 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gac 183 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct: 778 aatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggcgac 837 Query: 184 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 243 || |||||||||||||||||||||||||||||||| || || |||||||||||| Sbjct: 838 gggctgtctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgta 897 Query: 244 gcaaactctgaatactag 261 ||||||| ||||||||| Sbjct: 898 gcaaactaagaatactag 915 Score = 220 bits (111), Expect = 4e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||| |||| ||||| |||| ||||||||||| | |||| | ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggag 1052 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1053 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1112 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 ||||| ||| || ||||| ||||||| ||||||||||| |||||| Sbjct: 1113 tgcgccgaaaattcacgggactaagcggcctgccgaagctatgggat 1159 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 atcggtaggggagcgttccg 551 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5944458 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5944399 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5944398 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5944339 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5944338 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5944279 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944278 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 4916814 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 4916755 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 4916754 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 4916695 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 4916694 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 4916635 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916634 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2503482 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2503541 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2503542 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2503601 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2503602 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2503661 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503662 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2378691 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2378750 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2378751 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2378810 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2378811 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2378870 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378871 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 186 bits (94), Expect = 5e-44 Identities = 155/174 (89%), Gaps = 1/174 (0%) Strand = Plus / Minus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||| || || |||||||||||||||| | | || ||| Sbjct: 5944729 ttatagacccgaaccctggtgatctaaccatggccaggatgaagcttgggtaacaccaag 5944670 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 5944669 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaa 5944610 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 5944609 tgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 5944556 Score = 186 bits (94), Expect = 5e-44 Identities = 155/174 (89%), Gaps = 1/174 (0%) Strand = Plus / Minus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||| || || |||||||||||||||| | | || ||| Sbjct: 4917085 ttatagacccgaaccctggtgatctaaccatggccaggatgaagcttgggtaacaccaag 4917026 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 4917025 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaa 4916966 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 4916965 tgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 4916912 Score = 186 bits (94), Expect = 5e-44 Identities = 155/174 (89%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||| || || |||||||||||||||| | | || ||| Sbjct: 2503211 ttatagacccgaaccctggtgatctaaccatggccaggatgaagcttgggtaacaccaag 2503270 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 2503271 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaa 2503330 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 2503331 tgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 2503384 Score = 186 bits (94), Expect = 5e-44 Identities = 155/174 (89%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||| || || |||||||||||||||| | | || ||| Sbjct: 2378420 ttatagacccgaaccctggtgatctaaccatggccaggatgaagcttgggtaacaccaag 2378479 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 2378480 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaa 2378539 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 2378540 tgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 2378593 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 194 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 253 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5944537 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5944478 Query: 254 aatac 258 ||||| Sbjct: 5944477 aatac 5944473 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 194 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 253 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 4916893 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 4916834 Query: 254 aatac 258 ||||| Sbjct: 4916833 aatac 4916829 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 194 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 253 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2503403 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2503462 Query: 254 aatac 258 ||||| Sbjct: 2503463 aatac 2503467 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 194 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 253 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2378612 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2378671 Query: 254 aatac 258 ||||| Sbjct: 2378672 aatac 2378676
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 244 bits (123), Expect = 3e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 972 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 1031 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 1032 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 1091 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1092 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 1151 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 517 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 1152 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 1194 Score = 184 bits (93), Expect = 2e-43 Identities = 154/173 (89%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 5 tatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagc 63 |||||||||||||| |||||||||| || || |||||||||||||||| | |||| ||| Sbjct: 695 tatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaacgaagt 754 Query: 64 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 123 || | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| Sbjct: 755 ggaagaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaat 814 Query: 124 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 815 accaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 867 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 190 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 249 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 884 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 943 Query: 250 tctgaatactaga 262 || |||||||||| Sbjct: 944 tcagaatactaga 956
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 244 bits (123), Expect = 3e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 2741 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 2800 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 2801 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 2860 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2861 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 2920 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 517 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 2921 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 2963 Score = 184 bits (93), Expect = 2e-43 Identities = 154/173 (89%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 5 tatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagc 63 |||||||||||||| |||||||||| || || |||||||||||||||| | |||| ||| Sbjct: 2464 tatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaacgaagt 2523 Query: 64 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 123 || | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| Sbjct: 2524 ggaagaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaat 2583 Query: 124 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 2584 accaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 2636 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 190 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 249 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 2653 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 2712 Query: 250 tctgaatactaga 262 || |||||||||| Sbjct: 2713 tcagaatactaga 2725
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 242 bits (122), Expect = 1e-60 Identities = 226/258 (87%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 942 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1001 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1002 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1061 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1062 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1121 Query: 475 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 533 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1122 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1180 Query: 534 cggtaggggagcgttccg 551 |||||||||||||||||| Sbjct: 1181 cggtaggggagcgttccg 1198 Score = 163 bits (82), Expect = 7e-37 Identities = 152/174 (87%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 ||||||||||||||| | |||||||| || || ||||| |||||||| | ||| ||| || Sbjct: 665 ttatggacccgaacccgagtgatctaaccatggccagggtgaagctttggtgagactgag 724 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 |||| ||| |||||| ||||||||| ||| ||||||||| ||||||||||||||||| Sbjct: 725 tggaggcccgtaccgaccgatgttgaaagatcggcggatgagctgtggttaggggtgaaa 784 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 785 tgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 838 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 193 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 252 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 857 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 916 Query: 253 gaatact 259 ||||||| Sbjct: 917 gaatact 923
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 242 bits (122), Expect = 1e-60 Identities = 226/258 (87%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 955 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1014 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1015 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1074 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1075 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1134 Query: 475 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 533 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1135 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1193 Query: 534 cggtaggggagcgttccg 551 |||||||||||||||||| Sbjct: 1194 cggtaggggagcgttccg 1211 Score = 163 bits (82), Expect = 7e-37 Identities = 152/174 (87%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 ||||||||||||||| | |||||||| || || ||||| |||||||| | ||| ||| || Sbjct: 678 ttatggacccgaacccgagtgatctaaccatggccagggtgaagctttggtgagactgag 737 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 |||| ||| |||||| ||||||||| ||| ||||||||| ||||||||||||||||| Sbjct: 738 tggaggcccgtaccgaccgatgttgaaagatcggcggatgagctgtggttaggggtgaaa 797 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 798 tgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 851 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 193 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 252 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 870 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 929 Query: 253 gaatact 259 ||||||| Sbjct: 930 gaatact 936
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 242 bits (122), Expect = 1e-60 Identities = 226/258 (87%), Gaps = 2/258 (0%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 5529 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 5588 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 5589 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 5648 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 5649 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 5708 Query: 475 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 533 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 5709 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 5767 Query: 534 cggtaggggagcgttccg 551 |||||||||||||||||| Sbjct: 5768 cggtaggggagcgttccg 5785 Score = 163 bits (82), Expect = 7e-37 Identities = 152/174 (87%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 ||||||||||||||| | |||||||| || || ||||| |||||||| | ||| ||| || Sbjct: 5252 ttatggacccgaacccgagtgatctaaccatggccagggtgaagctttggtgagactgag 5311 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 |||| ||| |||||| ||||||||| ||| ||||||||| ||||||||||||||||| Sbjct: 5312 tggaggcccgtaccgaccgatgttgaaagatcggcggatgagctgtggttaggggtgaaa 5371 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| |||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 5372 tgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 5425 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 193 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 252 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5444 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 5503 Query: 253 gaatact 259 ||||||| Sbjct: 5504 gaatact 5510
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 242 bits (122), Expect = 1e-60 Identities = 223/254 (87%), Gaps = 2/254 (0%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatcta-tcctgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| || ||||||| || || ||||| |||||||| | | | |||||| ||| Sbjct: 2442 gacccgaacccggatgatctagtcatggccagggtgaagcttaggtaacactaagtggag 2501 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 2502 gtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgcca 2561 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 187 ||||| || ||||||||||||||||||||||||||||| |||||||| ||||| | Sbjct: 2562 atcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcggttgatgcta 2621 Query: 188 catc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 246 | | ||||||||||||||||||||||| ||||||| | |||||||||||||||||||| Sbjct: 2622 tagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggtaccaaatcgaggca 2681 Query: 247 aactctgaatacta 260 |||||||||||||| Sbjct: 2682 aactctgaatacta 2695 Score = 163 bits (82), Expect = 7e-37 Identities = 215/256 (83%), Gaps = 5/256 (1%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 |||||||||||||| || |||| |||||| ||||| |||| ||||| ||||||| Sbjct: 2769 taaggcccctaaatatttactaagtggcaaaggaagtgggaatgcatagacaaccaggag 2828 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2829 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtccagtgatcc 2888 Query: 475 tgcgctgaagatgaacggggctaagcgatc-tgccgaagctgtgggatgtcaaaatgcat 533 ||||| ||| ||||| ||| || || ||| ||||||||||||||||||| || ||| Sbjct: 2889 tgcgccgaaaatgaatgggacttag-tatcttgccgaagctgtgggatgtttaa---cat 2944 Query: 534 cggtaggggagcgttc 549 |||||||||||||||| Sbjct: 2945 cggtaggggagcgttc 2960
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 240 bits (121), Expect = 4e-60 Identities = 228/259 (88%), Gaps = 6/259 (2%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||| || || |||||||||||||||| | | || ||| Sbjct: 295 ttatagacccgaaccctggtgatctaaccatggccaggatgaagcttgggtaacaccaag 354 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 355 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 414 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--t 180 ||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||| || | Sbjct: 415 tgccaatcgaaccaggagctagctggttctccccgaaatgtgtttaggcgcagcggtaat 474 Query: 181 gactggacatctag-gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 || | | |||| | |||||||||||||||||||||||||||| | || ||||||||||| Sbjct: 475 gatt--atatctggggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaat 532 Query: 240 cgaggcaaactctgaatac 258 |||| |||||||||||||| Sbjct: 533 cgagacaaactctgaatac 551 Score = 230 bits (116), Expect = 4e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactagga 685 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 | ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 atcggtaggggagcgttccg 551 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 238 bits (120), Expect = 2e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2482 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2541 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2542 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2601 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 ||||||||||||||||| |||||| ||||||||||||||||||||||| || ||||| | Sbjct: 2602 gtttgcctagaagcagcaacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2661 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 518 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2662 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2705 Score = 216 bits (109), Expect = 6e-53 Identities = 220/254 (86%), Gaps = 6/254 (2%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || || |||||||||||||||| | |||| ||| ||| Sbjct: 2216 gacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaagtggag 2275 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 2276 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 2335 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 187 |||||| | ||||||||||||||||||||||||| ||||||||||||| || | |||| Sbjct: 2336 atcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagcggt--agtgga 2393 Query: 188 catcta---ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 244 | || ||||||||||||||||||| |||||||| | || ||||||||| ||||| Sbjct: 2394 agtttagtcggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgagg 2453 Query: 245 caaactctgaatac 258 |||||||||||||| Sbjct: 2454 caaactctgaatac 2467
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| | | || |||||||||||||||| | |||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcactaagtgataaaggaggtgagattgcatagacaactagga 685 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcggtc 745 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 |||||| ||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggat 793 Score = 186 bits (94), Expect = 5e-44 Identities = 155/174 (89%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||| || || |||||||||||||||| | | || ||| Sbjct: 295 ttatagacccgaaccctggtgatctaaccatggccaggatgaagcttgggtaacaccaag 354 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 355 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaa 414 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 415 tgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 468 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 193 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 252 |||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 486 aggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 545 Query: 253 gaatact 259 ||||||| Sbjct: 546 gaatact 552
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 234 bits (118), Expect = 2e-58 Identities = 184/206 (89%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 474 ttgcgctgaagatgaacggggctaag 499 ||||| ||| ||||||||||||||| Sbjct: 746 ctgcgccgaaaatgaacggggctaag 771 Score = 194 bits (98), Expect = 2e-46 Identities = 156/174 (89%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||| || || |||||||||||||||| | | || ||| Sbjct: 295 ttatagacccgaaccccggtgatctaaccatgtccaggatgaagcttgggtaacaccaag 354 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 355 tggaggtccgaaccgactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaa 414 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 415 tgccaatcgaaccgggagctagctggttctccccgaaatgtgttgaggcgcagc 468 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 194 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 253 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 254 aatactagat 263 ||||| |||| Sbjct: 547 aataccagat 556
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 232 bits (117), Expect = 1e-57 Identities = 227/262 (86%), Gaps = 5/262 (1%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| | |||| ||||| |||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgagaaaggaggtgagagtgcatagacaactagga 685 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt----caaaat 529 || ||| ||| ||||||||||||||||||| | ||||||||||||||| | ||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggatttgttgaaaaat 804 Query: 530 gcatcggtaggggagcgttccg 551 |||||||||||||||||||| Sbjct: 805 aaatcggtaggggagcgttccg 826 Score = 170 bits (86), Expect = 3e-39 Identities = 153/174 (87%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||| || || |||||||||||||||| | | || ||| Sbjct: 295 ttatagacccgaaccctggtgatctaaccatgtccaggatgaagcttgggtaacaccaag 354 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 355 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgaggtgtggttaggggtgaaa 414 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||| Sbjct: 415 tgccaatcgaaccaggagctagctggttctccccgaaatgtgtttaggcgcagc 468 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 194 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 253 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 254 aatac 258 ||||| Sbjct: 547 aatac 551
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 232 bits (117), Expect = 1e-57 Identities = 227/259 (87%), Gaps = 6/259 (2%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||| || || |||||||||||||||| | | || ||| Sbjct: 295 ttatagacccgaaccctggtgatctaaccatggccaggatgaagcttgggtaacaccaag 354 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 355 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaa 414 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--t 180 ||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||| || | Sbjct: 415 tgccaatcgaaccaggagctagctggttctccccgaaatgtgtttaggcgcagcggtaat 474 Query: 181 gactggacatctag-gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 || | | |||| | |||||||||||||||||||||||||||| | || ||||||||||| Sbjct: 475 gatt--atatctggggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaat 532 Query: 240 cgaggcaaactctgaatac 258 |||| |||||||||||||| Sbjct: 533 cgagacaaactctgaatac 551 Score = 214 bits (108), Expect = 2e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactagga 685 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 517 ||||| ||| |||||||||||| ||| || | ||||| ||||| Sbjct: 746 ctgcgccgaatatgaacggggctgagccatgtaccgaaactgtg 789
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 232 bits (117), Expect = 1e-57 Identities = 228/263 (86%), Gaps = 4/263 (1%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| |||||||||| || || |||||||||||||||| | | | ||| Sbjct: 677 ttatagacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaacaacaag 736 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 737 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaa 796 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--- 179 | ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 797 taccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtaaa 856 Query: 180 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 ||| || |||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 857 tgatgggctgtctaggggtaaagctctgtttcggtgcgggctgcgaaagcggtaccaaat 916 Query: 240 cgaggcaaactctgaatactaga 262 || |||||||| |||||||||| Sbjct: 917 cgtggcaaactaagaatactaga 939 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1076 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1077 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1136 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagct 514 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 1137 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 1176
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 232 bits (117), Expect = 1e-57 Identities = 228/263 (86%), Gaps = 4/263 (1%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| |||||||||| || || |||||||||||||||| | | | ||| Sbjct: 2559 ttatagacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaacaacaag 2618 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 2619 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaa 2678 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--- 179 | ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 2679 taccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtaaa 2738 Query: 180 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 ||| || |||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 2739 tgatgggctgtctaggggtaaagctctgtttcggtgcgggctgcgaaagcggtaccaaat 2798 Query: 240 cgaggcaaactctgaatactaga 262 || |||||||| |||||||||| Sbjct: 2799 cgtggcaaactaagaatactaga 2821 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 2958 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 2959 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 3018 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagct 514 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 3019 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 3058
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 685 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 686 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 745 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 518 | ||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 746 t-cgccgaaaatgaacggggctaagttatctaccgaagctgtgg 788 Score = 216 bits (109), Expect = 6e-53 Identities = 220/254 (86%), Gaps = 6/254 (2%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || || |||||||||||||||| | |||| ||| ||| Sbjct: 300 gacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaagtggag 359 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 360 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 419 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 187 |||||| | ||||||||||||||||||||||||| ||||||||||||| || | |||| Sbjct: 420 atcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagcggt--agtgga 477 Query: 188 catcta---ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 244 | || ||||||||||||||||||| |||||||| | || ||||||||| ||||| Sbjct: 478 agtttagtcggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgagg 537 Query: 245 caaactctgaatac 258 |||||||||||||| Sbjct: 538 caaactctgaatac 551
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 230 bits (116), Expect = 4e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 || ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 186 bits (94), Expect = 5e-44 Identities = 155/174 (89%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||| || || |||||||||||||||| | | || ||| Sbjct: 295 ttatagacccgaaccctggtgatctaaccatggccaggatgaagcttgggtaacaccaag 354 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 355 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaa 414 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 415 tgccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 468 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 194 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 253 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 254 aatac 258 ||||| Sbjct: 547 aatac 551
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 296 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 355 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2050904 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 2050845 Query: 356 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 415 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 2050844 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 2050785 Query: 416 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 475 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2050784 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2050725 Query: 476 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 518 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 2050724 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 2050682 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 296 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 355 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1450597 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 1450656 Query: 356 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 415 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 1450657 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 1450716 Query: 416 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 475 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1450717 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1450776 Query: 476 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 518 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 1450777 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 1450819 Score = 198 bits (100), Expect = 1e-47 Identities = 205/236 (86%), Gaps = 3/236 (1%) Strand = Plus / Minus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 ||||||||||||||||||||| || || ||||| |||||||||| | || | ||| ||| Sbjct: 2051170 gacccgaacctgggtgatctaaccatggccaggctgaagcttgggtaaagccaagtggag 2051111 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 | |||||||| |||||||||| ||||| |||||||| |||||||||||||||||||||| Sbjct: 2051110 ggccgaaccgggtgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatgcca 2051051 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg- 186 |||||||||||||||||||||||||||||||||||||||||||||||| || ||| || Sbjct: 2051050 atcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc-gtcgacgggt 2050992 Query: 187 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 242 || | |||||| ||||||| ||||||||||| ||| |||| |||||||||||| Sbjct: 2050991 acctggtggggtagagcactgaatcggtgcgggcggcgagagctgtaccaaatcga 2050936 Score = 198 bits (100), Expect = 1e-47 Identities = 205/236 (86%), Gaps = 3/236 (1%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 ||||||||||||||||||||| || || ||||| |||||||||| | || | ||| ||| Sbjct: 1450331 gacccgaacctgggtgatctaaccatggccaggctgaagcttgggtaaagccaagtggag 1450390 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 | |||||||| |||||||||| ||||| |||||||| |||||||||||||||||||||| Sbjct: 1450391 ggccgaaccgggtgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatgcca 1450450 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg- 186 |||||||||||||||||||||||||||||||||||||||||||||||| || ||| || Sbjct: 1450451 atcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc-gtcgacgggt 1450509 Query: 187 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 242 || | |||||| ||||||| ||||||||||| ||| |||| |||||||||||| Sbjct: 1450510 acctggtggggtagagcactgaatcggtgcgggcggcgagagctgtaccaaatcga 1450565
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 228 bits (115), Expect = 2e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 137502 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 137561 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 137562 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 137621 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137622 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 228 bits (115), Expect = 2e-56 Identities = 199/227 (87%) Strand = Plus / Minus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 48042 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 47983 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 47982 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 47923 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47922 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876 Score = 208 bits (105), Expect = 1e-50 Identities = 225/263 (85%), Gaps = 4/263 (1%) Strand = Plus / Plus Query: 3 cttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaa 61 |||||||||||||||| |||||||||| || ||||||||||||||||||| | |||| || Sbjct: 137163 cttatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaa 137222 Query: 62 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 121 | || | |||||||||| ||||||||| |||| |||||||||||||||||||||| ||| Sbjct: 137223 gtggaagaccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggagaa 137282 Query: 122 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt- 180 || | | |||||| | |||||||||||||||| ||||||| ||||||||||||| ||| Sbjct: 137283 attctaatcgaactcggagctagctggttctcttcgaaatgtgttgaggcgcagcggttg 137342 Query: 181 --gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 238 ||| || ||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct: 137343 gcgacgggctgtctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaa 137402 Query: 239 tcgaggcaaactctgaatactag 261 ||| |||||||| ||||||||| Sbjct: 137403 tcgtagcaaactcagaatactag 137425 Score = 208 bits (105), Expect = 1e-50 Identities = 225/263 (85%), Gaps = 4/263 (1%) Strand = Plus / Minus Query: 3 cttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaa 61 |||||||||||||||| |||||||||| || ||||||||||||||||||| | |||| || Sbjct: 48381 cttatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaa 48322 Query: 62 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 121 | || | |||||||||| ||||||||| |||| |||||||||||||||||||||| ||| Sbjct: 48321 gtggaagaccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggagaa 48262 Query: 122 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt- 180 || | | |||||| | |||||||||||||||| ||||||| ||||||||||||| ||| Sbjct: 48261 attctaatcgaactcggagctagctggttctcttcgaaatgtgttgaggcgcagcggttg 48202 Query: 181 --gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 238 ||| || ||||||||||||||||||||||||||||||||| | | ||||||||| Sbjct: 48201 gcgacgggctgtctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaa 48142 Query: 239 tcgaggcaaactctgaatactag 261 ||| |||||||| ||||||||| Sbjct: 48141 tcgtagcaaactcagaatactag 48119
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 226 bits (114), Expect = 6e-56 Identities = 230/265 (86%), Gaps = 4/265 (1%) Strand = Plus / Plus Query: 3 cttatggacccgaacctgggtgatcta-tcctgaccaggatgaagcttggatgaaactaa 61 |||||||||||||||| |||||||||| || || |||||||||| |||| | | || || Sbjct: 863 cttatggacccgaacccgggtgatctaatcatggccaggatgaaatttgggtaacaccaa 922 Query: 62 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 121 | ||||||||||||||| ||||||||| |||| |||||||||||||| ||||||| ||| Sbjct: 923 ccggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaa 982 Query: 122 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt- 180 || ||| |||||| | ||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 983 attccaatcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagcggtta 1042 Query: 181 -gactggacatctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaa 238 || | |||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct: 1043 agatttaccatctaggggtaaagcgactgtttcggtgcgggctgcgaaagcggtaccaag 1102 Query: 239 tcgaggcaaactctgaatactagat 263 ||| ||||||||| ||||||||||| Sbjct: 1103 tcgtggcaaactcagaatactagat 1127 Score = 129 bits (65), Expect = 1e-26 Identities = 158/189 (83%) Strand = Plus / Plus Query: 329 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 388 ||||||||||||||| ||||||||||||||||||||||||| | || |||| |||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaagga 1236 Query: 389 ggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgc 448 ||| | ||| | ||| ||||||||||||| ||||||||||||||||| | ||||||| Sbjct: 1237 tgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccacccttgatagagtgc 1296 Query: 449 gtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 508 |||||||||||||| | |||| ||||||| || ||| |||| ||||| || ||||| Sbjct: 1297 gtaatagctcactggtaaagcgttcttgcgccgacaatggccgggactaagtgacctgcc 1356 Query: 509 gaagctgtg 517 ||||||||| Sbjct: 1357 gaagctgtg 1365
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 226 bits (114), Expect = 6e-56 Identities = 114/114 (100%) Strand = Plus / Plus Query: 438 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 498 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 114
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 224 bits (113), Expect = 2e-55 Identities = 183/205 (89%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| ||||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggag 687 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 475 tgcgctgaagatgaacggggctaag 499 | ||| ||| ||||||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaag 771 Score = 208 bits (105), Expect = 1e-50 Identities = 154/169 (91%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || || |||||||||||||||| | |||| ||| ||| Sbjct: 301 gacccgaacccgggtgatctaaccatgtccaggatgaagcttgggtaaaaccaagtggag 360 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 |||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||||| Sbjct: 361 gtccgaaccgaccgatgttgaaaaatcggcggatgaggtgtggttaggggtgaaatgcca 420 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 421 atcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagc 469 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 194 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 253 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 254 aatac 258 ||||| Sbjct: 548 aatac 552
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 224 bits (113), Expect = 2e-55 Identities = 226/259 (87%), Gaps = 6/259 (2%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||| || || |||||||||||||||| | | || ||| Sbjct: 295 ttatagacccgaaccctggtgatctaaccatggccaggatgaagcttgggtaacaccaag 354 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 355 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaa 414 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--t 180 ||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||| || | Sbjct: 415 tgccaatcgaaccaggagctagctggttctccccgaaatgtgtttaggcgcagcggtaat 474 Query: 181 gactggacatctag-gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 || | | |||| | |||||||||||||||||||||||||||| | || ||||||||||| Sbjct: 475 gatt--aaatctggggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaat 532 Query: 240 cgaggcaaactctgaatac 258 |||| ||||||| |||||| Sbjct: 533 cgagacaaactcagaatac 551 Score = 222 bits (112), Expect = 9e-55 Identities = 200/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactagga 685 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 | ||| ||| |||||||||||||||| || | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcaatgtaccgaagctgtgggat 792
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 224 bits (113), Expect = 2e-55 Identities = 220/253 (86%), Gaps = 2/253 (0%) Strand = Plus / Plus Query: 10 acccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagagg 68 ||||||||| |||||||||| || || ||||| |||||||||| | |||||||| |||| Sbjct: 1132 acccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggagg 1191 Query: 69 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 128 |||||| || ||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 1192 cccgaactgatcgatgttgaaaaatcgtcggatgagttgtggttagcggtgaaatgccaa 1251 Query: 129 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 188 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| | | Sbjct: 1252 tcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttaagattat 1311 Query: 189 atc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 247 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1312 aacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaa 1371 Query: 248 actctgaatacta 260 ||| |||||||| Sbjct: 1372 actaagaatacta 1384 Score = 216 bits (109), Expect = 6e-53 Identities = 190/217 (87%) Strand = Plus / Plus Query: 307 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 366 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 367 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 426 || | ||| |||| ||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 427 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 486 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1589 Query: 487 gaacggggctaagcgatctgccgaagctgtgggatgt 523 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 1590 gaaagggactaagctatttgccgaagctgtgggatgt 1626 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 catcggtaggggagcgttccg 551 ||||||||||||||||||||| Sbjct: 1672 catcggtaggggagcgttccg 1692
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 224 bits (113), Expect = 2e-55 Identities = 228/261 (87%), Gaps = 4/261 (1%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || ||||||||||||||||||| | | || | | || Sbjct: 2719 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaataccacgtgaag 2778 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 2779 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 2838 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 187 |||||| | ||||||||||||||||||||||||||||||||||||| | || | || Sbjct: 2839 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgca-cggtcagcaaga 2897 Query: 188 c-atctaggggt-aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 245 | |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| ||| Sbjct: 2898 ctatctaggggtaaaagcactgtttcggtgcgggccgcgaaagctgtaccaaatcgtggc 2957 Query: 246 aaactctgaatactagatatg 266 ||||||||||||||||||||| Sbjct: 2958 aaactctgaatactagatatg 2978 Score = 93.7 bits (47), Expect = 6e-16 Identities = 143/170 (84%), Gaps = 5/170 (2%) Strand = Plus / Plus Query: 293 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 352 |||||||||||| ||||||||||||||||| || ||||||||||| ||| ||| || Sbjct: 2988 ggccagtgagacagtgggggataagcttcattgta-agagggaaaca-cccagat-ac-- 3042 Query: 353 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 412 |||||||||||||||||| | | |||| |||||||||| | ||| ||||| |||| Sbjct: 3043 gctaaggcccctaaatgattgttaagtggcaaaggaggtgagaatgctcagacaaccaga 3102 Query: 413 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 462 |||||||| |||||||||| | |||||||||||||||||| ||||||||| Sbjct: 3103 aggtttgcttagaagcagcaatcctttaaagagtgcgtaacagctcactg 3152
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2481 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2540 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2541 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2600 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 ||||||||||| ||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2601 gtttgcctagaggcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2660 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 518 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2661 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2704 Score = 208 bits (105), Expect = 1e-50 Identities = 219/254 (86%), Gaps = 6/254 (2%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || || |||||||||||||||| | |||| ||| ||| Sbjct: 2215 gacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaagtggag 2274 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 2275 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 2334 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 187 |||||| | ||||||||||||||||||||||||| ||||||||||||| || | |||| Sbjct: 2335 atcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagcggt--agtgga 2392 Query: 188 catcta---ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 244 | || ||||||||||||||||||| |||||||| | || |||||||| ||||| Sbjct: 2393 agtttagtcggggtaaagcactgtttcgccgcgggctgggagaccggtaccagggcgagg 2452 Query: 245 caaactctgaatac 258 |||||||||||||| Sbjct: 2453 caaactctgaatac 2466
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 3327965 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 3328024 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 3328025 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 3328084 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 3328085 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 3328144 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 518 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 3328145 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 3328188 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Minus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 2450763 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 2450704 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2450703 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2450644 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2450643 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2450584 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 518 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 2450583 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 2450540 Score = 210 bits (106), Expect = 4e-51 Identities = 218/253 (86%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || || |||||||||||||| | | | |||||| ||| Sbjct: 3327698 gacccgaacccgggtgatctaaccatggccaggatgaagcttaggtaacactaagtggag 3327757 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 3327758 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 3327817 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 187 |||||||| ||||||||||||||||||||||||| ||| ||||||||| |||| | Sbjct: 3327818 atcgaacccggagctagctggttctccccgaaatgtgtttaggcgcagcggttgtaaagt 3327877 Query: 188 catct--aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 245 || || ||||||||||||||||||| ||||||| ||| |||| |||||||| ||||| Sbjct: 3327878 caacttggggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggc 3327937 Query: 246 aaactctgaatac 258 |||||| |||||| Sbjct: 3327938 aaactcagaatac 3327950 Score = 210 bits (106), Expect = 4e-51 Identities = 218/253 (86%), Gaps = 3/253 (1%) Strand = Plus / Minus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| |||||||||| || || |||||||||||||| | | | |||||| ||| Sbjct: 2451030 gacccgaacccgggtgatctaaccatggccaggatgaagcttaggtaacactaagtggag 2450971 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 ||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||||| Sbjct: 2450970 gtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatgcca 2450911 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 187 |||||||| ||||||||||||||||||||||||| ||| ||||||||| |||| | Sbjct: 2450910 atcgaacccggagctagctggttctccccgaaatgtgtttaggcgcagcggttgtaaagt 2450851 Query: 188 catct--aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 245 || || ||||||||||||||||||| ||||||| ||| |||| |||||||| ||||| Sbjct: 2450850 caacttggggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggc 2450791 Query: 246 aaactctgaatac 258 |||||| |||||| Sbjct: 2450790 aaactcagaatac 2450778
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Plus Query: 296 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 355 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 2313248 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 2313307 Query: 356 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 415 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 2313308 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 2313367 Query: 416 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 475 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2313368 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2313427 Query: 476 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 518 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 2313428 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 2313470 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Minus Query: 296 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 355 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 1108599 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 1108540 Query: 356 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 415 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 1108539 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 1108480 Query: 416 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 475 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1108479 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1108420 Query: 476 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 518 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 1108419 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 1108377 Score = 192 bits (97), Expect = 8e-46 Identities = 152/169 (89%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 ||||||||||||||||||||| || || ||||| |||||||||| | || | ||| ||| Sbjct: 2312982 gacccgaacctgggtgatctaaccatggccaggctgaagcttgggtaaagccaagtggag 2313041 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 | |||||||| |||||||||| ||||| |||||||| |||||||||||||||||||||| Sbjct: 2313042 ggccgaaccggttgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatgcca 2313101 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2313102 atcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 2313150 Score = 192 bits (97), Expect = 8e-46 Identities = 152/169 (89%), Gaps = 1/169 (0%) Strand = Plus / Minus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 ||||||||||||||||||||| || || ||||| |||||||||| | || | ||| ||| Sbjct: 1108865 gacccgaacctgggtgatctaaccatggccaggctgaagcttgggtaaagccaagtggag 1108806 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 | |||||||| |||||||||| ||||| |||||||| |||||||||||||||||||||| Sbjct: 1108805 ggccgaaccggttgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatgcca 1108746 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1108745 atcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 1108697
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 220 bits (111), Expect = 4e-54 Identities = 230/265 (86%), Gaps = 6/265 (2%) Strand = Plus / Plus Query: 5 tatggacccgaacctgggtgatcta-tcctgaccaggatgaagcttggatgaaactaagc 63 |||||||||||||| |||||||||| || ||||||||||||||||||| | | || ||| Sbjct: 814 tatggacccgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagt 873 Query: 64 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 123 ||||||||||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| Sbjct: 874 ggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaat 933 Query: 124 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 183 ||| |||||| | ||||||||||| ||||||||||||||||||||||||||| | |||| Sbjct: 934 tccaatcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgac 992 Query: 184 t---ggacatctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaat 239 | | |||||| |||||||| ||||||||| ||||||||||| ||||||||||| | Sbjct: 993 tatgagctatctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagt 1052 Query: 240 cgaggcaaactctgaatactagata 264 || ||||||||| |||||||||||| Sbjct: 1053 cgtggcaaactcagaatactagata 1077 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 329 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 388 ||||||||||||||| ||||||||||||||||||||||||| | || |||| |||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaagga 1185 Query: 389 ggtgggggtgcaaagacagccaggaggtttgcctagaa 426 ||| | |||| | ||| ||||||||||||| ||||| Sbjct: 1186 tgtgatgttgcagaaacaaccaggaggtttgcttagaa 1223 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 422 tagaagcagccaccctttaaagagtgcgtaatagctcactg 462 |||||||||| | |||| ||||||||||||||||||||||| Sbjct: 1848 tagaagcagcaagccttaaaagagtgcgtaatagctcactg 1888
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 220 bits (111), Expect = 4e-54 Identities = 230/265 (86%), Gaps = 6/265 (2%) Strand = Plus / Plus Query: 5 tatggacccgaacctgggtgatcta-tcctgaccaggatgaagcttggatgaaactaagc 63 |||||||||||||| |||||||||| || ||||||||||||||||||| | | || ||| Sbjct: 868 tatggacccgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagt 927 Query: 64 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 123 ||||||||||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| Sbjct: 928 ggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaat 987 Query: 124 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 183 ||| |||||| | ||||||||||| ||||||||||||||||||||||||||| | |||| Sbjct: 988 tccaatcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgac 1046 Query: 184 t---ggacatctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaat 239 | | |||||| |||||||| ||||||||| ||||||||||| ||||||||||| | Sbjct: 1047 tatgagctatctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagt 1106 Query: 240 cgaggcaaactctgaatactagata 264 || ||||||||| |||||||||||| Sbjct: 1107 cgtggcaaactcagaatactagata 1131 Score = 137 bits (69), Expect = 4e-29 Identities = 159/189 (84%) Strand = Plus / Plus Query: 329 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 388 ||||||||||||||| ||||||||||||||||||||||||| | || |||| |||||| Sbjct: 1180 agagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaagga 1239 Query: 389 ggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgc 448 ||| | ||| | ||| ||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 1240 tgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccacccttgaaagagtgc 1299 Query: 449 gtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 508 |||||||||||||| | |||| ||||||| || ||| |||| ||||| || ||||| Sbjct: 1300 gtaatagctcactggtaaagcgttcttgcgccgacaatggccgggactaagtgacctgcc 1359 Query: 509 gaagctgtg 517 ||||||||| Sbjct: 1360 gaagctgtg 1368
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 220 bits (111), Expect = 4e-54 Identities = 230/265 (86%), Gaps = 6/265 (2%) Strand = Plus / Plus Query: 5 tatggacccgaacctgggtgatcta-tcctgaccaggatgaagcttggatgaaactaagc 63 |||||||||||||| |||||||||| || ||||||||||||||||||| | | || ||| Sbjct: 814 tatggacccgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagt 873 Query: 64 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 123 ||||||||||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| Sbjct: 874 ggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaat 933 Query: 124 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 183 ||| |||||| | ||||||||||| ||||||||||||||||||||||||||| | |||| Sbjct: 934 tccaatcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgac 992 Query: 184 t---ggacatctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaat 239 | | |||||| |||||||| ||||||||| ||||||||||| ||||||||||| | Sbjct: 993 tatgagctatctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagt 1052 Query: 240 cgaggcaaactctgaatactagata 264 || ||||||||| |||||||||||| Sbjct: 1053 cgtggcaaactcagaatactagata 1077 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 329 agagggaaacagcccggatcaccagctaaggcccctaaatg 369 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 218 bits (110), Expect = 1e-53 Identities = 183/206 (88%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 474 ttgcgctgaagatgaacggggctaag 499 | ||| ||| ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaag 770 Score = 194 bits (98), Expect = 2e-46 Identities = 156/174 (89%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 |||| |||||||||| ||||||||| || || |||||||||||||||| | | || ||| Sbjct: 295 ttatagacccgaaccccggtgatctaaccatgtccaggatgaagcttgggtaacaccaag 354 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 355 tggaggtccgaaccgactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaa 414 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 176 ||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 415 tgccaatcgaaccgggagctagctggttctccccgaaatgtgttgaggcgcagc 468 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 194 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 253 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 254 aatactagat 263 ||||| |||| Sbjct: 547 aataccagat 556
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 218 bits (110), Expect = 1e-53 Identities = 220/254 (86%), Gaps = 2/254 (0%) Strand = Plus / Minus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| || ||||||| || || |||| |||||||| | | | |||||| ||| Sbjct: 39747 gacccgaacccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggag 39688 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 || ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 39687 gtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcca 39628 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 187 ||||| || ||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 39627 atcgaatccggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctc 39568 Query: 188 catc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 246 || | |||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 39567 caacttaggggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgca 39508 Query: 247 aactctgaatacta 260 |||||||||||||| Sbjct: 39507 aactctgaatacta 39494 Score = 218 bits (110), Expect = 1e-53 Identities = 220/254 (86%), Gaps = 2/254 (0%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| || ||||||| || || |||| |||||||| | | | |||||| ||| Sbjct: 19653 gacccgaacccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggag 19712 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 || ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 19713 gtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcca 19772 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 187 ||||| || ||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 19773 atcgaatccggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctc 19832 Query: 188 catc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 246 || | |||||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 19833 caacttaggggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgca 19892 Query: 247 aactctgaatacta 260 |||||||||||||| Sbjct: 19893 aactctgaatacta 19906 Score = 172 bits (87), Expect = 8e-40 Identities = 183/215 (85%) Strand = Plus / Minus Query: 307 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 366 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 367 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 426 || | ||| |||||||||||| ||||| ||| ||||| ||||||||| |||||||| Sbjct: 39408 ataattgctaagtgataaaggatgtgggaatgctgagacaatcaggaggttcgcctagaa 39349 Query: 427 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 486 ||||| | ||||||||||||||||||||||||||||||| ||||| | ||||| ||| || Sbjct: 39348 gcagctatcctttaaagagtgcgtaatagctcactgatcaagcgcacctgcgccgaaaat 39289 Query: 487 gaacggggctaagcgatctgccgaagctgtgggat 521 || ||| ||||| || ||||||||||||||||| Sbjct: 39288 gactgggactaagtaatttgccgaagctgtgggat 39254 Score = 172 bits (87), Expect = 8e-40 Identities = 183/215 (85%) Strand = Plus / Plus Query: 307 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 366 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 367 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 426 || | ||| |||||||||||| ||||| ||| ||||| ||||||||| |||||||| Sbjct: 19992 ataattgctaagtgataaaggatgtgggaatgctgagacaatcaggaggttcgcctagaa 20051 Query: 427 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 486 ||||| | ||||||||||||||||||||||||||||||| ||||| | ||||| ||| || Sbjct: 20052 gcagctatcctttaaagagtgcgtaatagctcactgatcaagcgcacctgcgccgaaaat 20111 Query: 487 gaacggggctaagcgatctgccgaagctgtgggat 521 || ||| ||||| || ||||||||||||||||| Sbjct: 20112 gactgggactaagtaatttgccgaagctgtgggat 20146
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 218 bits (110), Expect = 1e-53 Identities = 234/269 (86%), Gaps = 6/269 (2%) Strand = Plus / Plus Query: 3 cttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaa 61 |||||||||||||||| |||||||||| || ||||||||||||||||||| | || | || Sbjct: 699 cttatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaatccaa 758 Query: 62 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 121 | ||||||||||||||| ||||||||| |||| |||||||||||||||||||||| ||| Sbjct: 759 gtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggagaa 818 Query: 122 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt-- 179 || ||| |||||| | ||||||||||| ||||||||||||||||||||||||||| || Sbjct: 819 attccaatcgaactcggagctagctggatctccccgaaatgcgttgaggcgcagcggtaa 878 Query: 180 tgactggac-atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaa 237 || || || |||| |||||||||| ||||||||| ||||||||||| || |||||||| Sbjct: 879 cga-tgaactatcttggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaa 937 Query: 238 atcgaggcaaactctgaatactagatatg 266 ||| ||||||||| |||||| ||||||| Sbjct: 938 gtcgtggcaaactcagaatacaagatatg 966 Score = 174 bits (88), Expect = 2e-40 Identities = 190/224 (84%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 414 ||||||||||||||| | || |||| |||||| ||| | ||| | ||| ||||||| Sbjct: 1038 taaggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggag 1097 Query: 415 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 474 |||||| ||||||||||||||||| ||||||||||||||||||||||| | |||| || Sbjct: 1098 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttct 1157 Query: 475 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 518 ||||| || ||| |||| ||||| || ||||||||||||||| Sbjct: 1158 tgcgccgataatggccgggactaagtgacctgccgaagctgtgg 1201
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 216 bits (109), Expect = 6e-53 Identities = 222/256 (86%), Gaps = 4/256 (1%) Strand = Plus / Minus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| || ||||||| || || ||||| |||||||| | | | |||||| ||| Sbjct: 27136 gacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaagtggag 27077 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 |||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||| Sbjct: 27076 gtccgaaccgactgatgttgaaaaatcagcggacgagctgtggctaggggtgaaatgcca 27017 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctg 185 ||||| || ||||||||||||||||||||||||||||| |||||||| |||| || Sbjct: 27016 atcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcgattgatgcta 26957 Query: 186 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 245 | | ||||||||||||||||||||||||||||||| || || ||||||||||||| || Sbjct: 26956 ta-acctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgatgc 26898 Query: 246 aaactctgaatactag 261 |||||||||||||||| Sbjct: 26897 aaactctgaatactag 26882 Score = 159 bits (80), Expect = 1e-35 Identities = 191/228 (83%) Strand = Plus / Minus Query: 296 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 355 ||||||||| ||||||||||||||||| ||| | ||||||||||||| || || ||||| Sbjct: 26868 cagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccatcagct 26809 Query: 356 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 415 ||||||||||||| | || |||||||||||| || | ||| | ||| |||||||| Sbjct: 26808 aaggcccctaaataattactaagtgataaaggaagtaagaatgcgtaaacaaccaggagg 26749 Query: 416 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 475 || || |||||||||| | |||||||||||||||||||||||||||| | || | ||| Sbjct: 26748 ttcgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtttagtgatctt 26689 Query: 476 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 523 |||| ||| ||||||||||||||| || ||||||||||||||||||| Sbjct: 26688 gcgccgaaaatgaacggggctaagtaatttgccgaagctgtgggatgt 26641
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 216 bits (109), Expect = 6e-53 Identities = 196/225 (87%) Strand = Plus / Minus Query: 294 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 353 |||||| ||||| ||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 2333871 gccagtcagacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccag 2333812 Query: 354 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 413 |||||| ||| |||| | | || |||| ||||||||||||| ||| ||||| |||||| Sbjct: 2333811 ctaaggtccccaaatcatcactaagtggcaaaggaggtggggatgctcagacaaccagga 2333752 Query: 414 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 473 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 2333751 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 2333692 Query: 474 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 518 ||||| ||| ||||||||| ||||| ||| | |||||||||||| Sbjct: 2333691 ctgcgccgaaaatgaacgggactaagtgatgtaccgaagctgtgg 2333647 Score = 155 bits (78), Expect = 2e-34 Identities = 148/170 (87%), Gaps = 1/170 (0%) Strand = Plus / Minus Query: 3 cttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaa 61 ||||| |||||||||| |||||||||| || || |||| ||||||||||| | | || || Sbjct: 2334143 cttatagacccgaacccgggtgatctaaccatggccagaatgaagcttgggtaacaccaa 2334084 Query: 62 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 121 | ||||| || |||||| ||||||||| |||| ||||||||| |||||||||||||||| Sbjct: 2334083 gtggaggttcgcaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaa 2334024 Query: 122 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 171 |||||| |||||||| |||||||||||||||||||||||| |||||||| Sbjct: 2334023 atgccaatcgaacccggagctagctggttctccccgaaatatgttgaggc 2333974 Score = 105 bits (53), Expect = 2e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 194 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 253 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 2333950 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactctg 2333891 Query: 254 aatac 258 ||||| Sbjct: 2333890 aatac 2333886
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 212 bits (107), Expect = 9e-52 Identities = 123/127 (96%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 2 gcttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaacta 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 57 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 116 Query: 61 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 120 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117 agtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 176 Query: 121 aatgcca 127 ||||||| Sbjct: 177 aatgcca 183
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 212 bits (107), Expect = 9e-52 Identities = 188/215 (87%) Strand = Plus / Plus Query: 307 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 366 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 367 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 426 ||| ||||| |||| |||||||||| |||||||||| |||| |||||||| ||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtgaaaatgcaaagacaaccagaaggtttgcttagaa 1118 Query: 427 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 486 |||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 1119 gcagccacccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 1178 Query: 487 gaacggggctaagcgatctgccgaagctgtgggat 521 ||||||| ||||||| |||||||||||||||||| Sbjct: 1179 gaacgggactaagcggcctgccgaagctgtgggat 1213 Score = 186 bits (94), Expect = 5e-44 Identities = 222/261 (85%), Gaps = 4/261 (1%) Strand = Plus / Plus Query: 4 ttatggacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaag 62 ||||||||||||||||| |||||||| || || |||||||||| ||||| | | || || Sbjct: 709 ttatggacccgaacctgagtgatctaaccatggccaggatgaatcttgggtaacaccaaa 768 Query: 63 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 122 || | |||||||||| ||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 769 tggaagaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaa 828 Query: 123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 182 | ||| |||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||| Sbjct: 829 ttccagtcgaactcagagctagctggatctcctcgaaatgtgttgaggcgcagcggttga 888 Query: 183 --ctggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 239 ||| | | ||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 889 tgatgggctagttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaat 948 Query: 240 cgaggcaaactctgaatacta 260 || ||||||| |||||||| Sbjct: 949 cgtcgcaaactaagaatacta 969
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 212 bits (107), Expect = 9e-52 Identities = 217/253 (85%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 9 gacccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagag 67 |||||||||| || ||||||| || || |||||||||| ||| | | | |||||| ||| Sbjct: 2373 gacccgaacccggatgatctagccatggccaggatgaaacttaggtaacactaagtggag 2432 Query: 68 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 127 |||||||||||||||||||||| ||||| |||||||| ||||| ||| |||||||| ||| Sbjct: 2433 gtccgaaccgactgatgttgaaaaatcaacggatgagctgtggctagcggtgaaatacca 2492 Query: 128 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 187 ||||| | ||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 2493 atcgaattcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgaaatta 2552 Query: 188 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 247 | ||||||||||||||||||||||||||||||||| || ||||||||||||| |||| Sbjct: 2553 aacttaggggtaaagcactgtttcggtgcgggctgcgaaagyggtaccaaatcgatgcaa 2612 Query: 248 actctgaatacta 260 ||| |||||||| Sbjct: 2613 actaagaatacta 2625 Score = 149 bits (75), Expect = 1e-32 Identities = 210/254 (82%), Gaps = 2/254 (0%) Strand = Plus / Plus Query: 296 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 355 ||||||||| || |||||||||||||| ||| | ||||||||||||| || |||||| | Sbjct: 2640 cagtgagacagtgagggataagcttcattgtcaaaagggaaacagcccagaccaccagtt 2699 Query: 356 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 415 ||||||||||||| || |||| |||||||||||| |||| ||| |||||||| Sbjct: 2700 aaggcccctaaatagttactaagtggcaaaggaggtgggaatgcattaacaaccaggagg 2759 Query: 416 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 475 ||||| |||||||||| | |||||||||||||||||||||||||||| || || | | | Sbjct: 2760 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtctagtgatcct 2819 Query: 476 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcg 535 |||| ||| ||||||||| ||||| | ||||||| ||||||||||| |||||||| Sbjct: 2820 gcgccgaaaatgaacgggactaagtaacttgccgaatctgtgggatgt--ttatgcatcg 2877 Query: 536 gtaggggagcgttc 549 |||||||||||||| Sbjct: 2878 gtaggggagcgttc 2891
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 212 bits (107), Expect = 9e-52 Identities = 231/264 (87%), Gaps = 10/264 (3%) Strand = Plus / Plus Query: 10 acccgaacctgggtgatctatcc-tgaccaggatgaagcttggatgaaactaagcagagg 68 ||||||||| |||||||||| || || |||||||||||||||| | |||| ||| |||| Sbjct: 801 acccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaagtggagg 860 Query: 69 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 128 ||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||||| Sbjct: 861 tccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatgccaa 920 Query: 129 tcgaacccagagctagctggttctccccg-aaatgcgttgaggcgcagcagt---tgact 184 |||||| | ||||||||| |||||||||| ||||||||||| ||||||| || ||||| Sbjct: 921 tcgaactc-gagctagct-gttctccccgtaaatgcgttga-gcgcagcggttgatgact 977 Query: 185 --ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 242 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 978 tgggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgt 1037 Query: 243 ggcaaactctgaatactagatatg 266 ||||||| ||||||||| |||| Sbjct: 1038 agcaaactaagaatactaggtatg 1061 Score = 147 bits (74), Expect = 4e-32 Identities = 104/114 (91%) Strand = Plus / Plus Query: 408 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 467 ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| | || Sbjct: 1184 ccaggaggtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtgga 1243 Query: 468 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 521 ||| ||||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1244 gcgttcttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1297 Score = 129 bits (65), Expect = 1e-26 Identities = 90/97 (92%), Gaps = 1/97 (1%) Strand = Plus / Plus Query: 295 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 354 ||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 1073 ccagtgagacggtgggggataagcttcatcgtcgagagggaaaca-cccagatcaccagc 1131 Query: 355 taaggcccctaaatgaccgctcagtgataaaggaggt 391 ||||||||||||||| ||||| |||| ||||||||| Sbjct: 1132 taaggcccctaaatggccgctaagtggcaaaggaggt 1168 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 atcggtaggggagcgttccg 551 |||||||||||||||||||| Sbjct: 1547 atcggtaggggagcgttccg 1566 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,548,844 Number of Sequences: 3902068 Number of extensions: 3548844 Number of successful extensions: 67252 Number of sequences better than 10.0: 2659 Number of HSP's better than 10.0 without gapping: 2684 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 51490 Number of HSP's gapped (non-prelim): 14684 length of query: 551 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 528 effective length of database: 17,143,297,704 effective search space: 9051661187712 effective search space used: 9051661187712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)