>YCBX_ECOLI (P75863) Hypothetical protein ycbX|
          Length = 369

 Score = 92.4 bits (228), Expect = 7e-19
 Identities = 57/170 (33%), Positives = 88/170 (51%), Gaps = 8/170 (4%)
 Frame = +3

Query: 12  FKEESEXRPTNPEYAQGYK------LTFTDCFPFLIASQGSLDALNELLKEPVPINRFRP 173
           F  E + R   P+  +  K      L+F D +P+L+A++ SL  L +     V + +FRP
Sbjct: 114 FSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQRCPASVKMEQFRP 173

Query: 174 NILVDGCHPYAEDLWKTIKIDKLTFDGVKLCDRCKVPTVNQENGIL--GTEPTETMLTFR 347
           N++V G   + ED WK I+I  + FD VK C RC   TV+ E G      EP +T+ +FR
Sbjct: 174 NLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFR 233

Query: 348 SGEVLRPSHKNKQKVYFGQNLVCKESVSAKGKGRIVKVGDPVYVLQTYPS 497
           + +       +   V FGQNL+ + S        +++VGD V +L T P+
Sbjct: 234 TAQ-------DNGDVDFGQNLIARNS-------GVIRVGDEVEILATAPA 269

>COGT1_ARATH (Q9ZQ99) Cytokinin-O-glucosyltransferase 1 (EC 2.4.1.-) (Zeatin|
           O-glucosyltransferase 1) (AtZOG1)
          Length = 491

 Score = 32.7 bits (73), Expect = 0.67
 Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
 Frame = +3

Query: 6   VRFKEESEXRPTNPEYAQ-----GYKLTFTDCFPFLIASQGSLDALNELLKEPVPINRFR 170
           V+F  +    P   E        G  LTF   F  L       + + +LLKE  P    R
Sbjct: 70  VKFPSQESGSPEGQENLDLLDSLGASLTFFKAFSLLE------EPVEKLLKEIQP----R 119

Query: 171 PN-ILVDGCHPYAEDLWKTIKIDKLTFDGV 257
           PN I+ D C PY   + K + I K+ F G+
Sbjct: 120 PNCIIADMCLPYTNRIAKNLGIPKIIFHGM 149

>RS4E_METVA (P14023) 30S ribosomal protein S4e|
          Length = 244

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 20/116 (17%)
 Frame = +3

Query: 192 CHPYAEDLWKTIKIDKLTFDGVK---------LCDRCKVPTVNQ-------ENGILGTEP 323
           C   A +  K I++ K+  DGVK         L D   +P +N+       ENG +  + 
Sbjct: 55  CADNAREAKKIIQMGKILIDGVKRKEYKHPVGLMDVLSIPELNENYLVLFDENGRISLKK 114

Query: 324 TET----MLTFRSGEVLRPSHKNKQKVYFGQNLVCKESVSAKGKGRIVKVGDPVYV 479
           TE     +    +  V++  H  +  ++ G+N + K + + K +  I K GD V V
Sbjct: 115 TEKTGVKLCKIVNKTVIKGGHI-QLNLHDGRNQIVKVANALKAEEDIYKTGDSVLV 169

>TSA4_GIALA (P21849) Major surface-labeled trophozoite antigen 417 precursor|
          Length = 713

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 18/68 (26%), Positives = 24/68 (35%)
 Frame = +3

Query: 240 LTFDGVKLCDRCKVPTVNQENGILGTEPTETMLTFRSGEVLRPSHKNKQKVYFGQNLVCK 419
           LT DG   C  C   T   +NG+   + +    T     +           YF  N  C 
Sbjct: 478 LTIDGASYCSECATTTEYPQNGVCAPKASRATPTCNDSPIQNGVCGTCADNYFKMNGGCY 537

Query: 420 ESVSAKGK 443
           E+V   GK
Sbjct: 538 ETVKYPGK 545

>TS11_GIALA (Q03185) Major surface trophozoite antigen 11 precursor|
          Length = 667

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 17/68 (25%), Positives = 25/68 (36%)
 Frame = +3

Query: 240 LTFDGVKLCDRCKVPTVNQENGILGTEPTETMLTFRSGEVLRPSHKNKQKVYFGQNLVCK 419
           LT DG   C  C       +NGI  +    T+ T ++  V      +    +   N  C 
Sbjct: 426 LTIDGASYCSECDTQNEYPQNGICTSTTARTVATCKNSNVANGICSSCTNGFLRMNGGCY 485

Query: 420 ESVSAKGK 443
           E+    GK
Sbjct: 486 ETTKFPGK 493

>CAC1G_RAT (O54898) Voltage-dependent T-type calcium channel alpha-1G subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.1)
          Length = 2254

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -1

Query: 226  MVFHRSSA*GWHPSTKIFGLKRLIGTGSLRSSFSASSEP 110
            ++ H ++    HP +   G+   +G+GS R+S S S+EP
Sbjct: 1017 LIIHTAATPMSHPKSSSTGVGEALGSGSRRTSSSGSAEP 1055

>MRTFB_XENLA (Q8AYC1) Myocardin-related transcription factor B (MRTF-B) (xMRTF-B)|
          Length = 1067

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +3

Query: 15   KEESEXRPTNPEYAQGYKLTFTDCFPFLIASQGSLDALNELLKEPVPINRFRP 173
            K+      + PE +  +     D F  LI S      ++ L+KEP PI++ RP
Sbjct: 860  KQARNNPASQPEVSNAHSQQMDDLFDILIKS----GEMSPLIKEPSPISKMRP 908

>DHE4_UNKP (P14657) NADP-specific glutamate dehydrogenase (EC 1.4.1.4)|
           (NADP-GDH)
          Length = 446

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 36  PTNPEYAQGYKLTFTDCFPFLIASQGSLD-ALNELLKEPVPINRFR 170
           P  PEY Q  +  FT  +PF+  +    + AL E L EP  I +FR
Sbjct: 19  PHQPEYLQAVREVFTSLWPFIERNPAYREQALLERLVEPERIIQFR 64

>PYRF_RHIME (Q92SN8) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP|
           decarboxylase) (OMPDCase) (OMPdecase)
          Length = 234

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
 Frame = +3

Query: 279 VPTVNQENGILGTEPTETM-------LTFRSG-EVLRPSHKNKQKVYFGQNLVCKESVSA 434
           +PTV +   I+ T   E +       L F  G +  R    + ++V+    L+  ++  A
Sbjct: 15  LPTVTEAEKIVSTLGEEVLFYKIGYQLAFAGGLDFARDLAASGKQVFLDMKLLDIDNTVA 74

Query: 435 KGKGRIVKVGDPVYVLQTYPSS 500
           KG   IVK+G  +  L  YP +
Sbjct: 75  KGVENIVKMGVSMLTLHAYPKA 96

>RPOC_DESPS (Q6AP77) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1349

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 11/139 (7%)
 Frame = +3

Query: 120 DALNELLKE-PVPINRFRPNILVDGCHPYAEDL--WKTIKIDKLT-------FDGVKLCD 269
           D L E++ E PV +NR  P +   G   +   L   K I++  L        FDG ++  
Sbjct: 410 DVLEEVVTEYPVILNR-APTLHRLGMQAFEAVLIEGKAIRLHPLVCMAFNADFDGDQMAV 468

Query: 270 RCKVPTVNQENGILGTEPTETMLTFRSGE-VLRPSHKNKQKVYFGQNLVCKESVSAKGKG 446
              +    Q    +    T  +L+  +GE V+ PS    Q +  G   + +E ++ KG+G
Sbjct: 469 HVPLSVEAQVEARVLMMSTNNILSPANGEPVIIPS----QDIVLGLYYMTRERINVKGEG 524

Query: 447 RIVKVGDPVYVLQTYPSSD 503
           R+    D   +   Y  +D
Sbjct: 525 RVFSSVDEAIISYDYKETD 543


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,336,747
Number of Sequences: 219361
Number of extensions: 1729561
Number of successful extensions: 4261
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4261
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)