ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd22a22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1336 bits (674), Expect = 0.0 Identities = 691/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120019 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 119960 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119959 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 119900 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119899 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 119840 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119839 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 119780 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119779 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 119720 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119719 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 119660 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119659 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 119600 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119599 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 119540 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119539 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 119480 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 119479 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 119421 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 119420 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 119362 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 119361 tccatgaccaggatgaagcttggatgaaactaag 119328 Score = 1336 bits (674), Expect = 0.0 Identities = 691/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94875 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 94934 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94935 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 94994 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94995 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 95054 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95055 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 95114 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95115 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 95174 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95175 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 95234 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95235 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 95294 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95295 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 95354 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95355 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 95414 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 95415 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 95473 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 95474 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 95532 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 95533 tccatgaccaggatgaagcttggatgaaactaag 95566
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118800 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 118741 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 118740 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 118681 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118680 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 118621 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118620 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 118561 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118560 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 118501 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 118500 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 118441 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118440 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 118381 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118380 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 118321 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118320 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 118261 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 118260 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 118202 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 118201 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 118143 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 118142 tccatgaccaggatgaagcttggatgaaactaag 118109
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119884 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 119825 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119824 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 119765 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119764 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 119705 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119704 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 119645 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119644 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 119585 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119584 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 119525 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119524 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 119465 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119464 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 119405 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119404 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 119345 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 119344 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 119286 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 119285 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 119227 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 119226 tccatgaccaggatgaagcttggatgaaactaag 119193 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95272 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 95331 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95332 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 95391 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95392 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 95451 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95452 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 95511 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95512 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 95571 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95572 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 95631 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95632 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 95691 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95692 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 95751 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95752 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 95811 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 95812 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 95870 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 95871 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 95929 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 95930 tccatgaccaggatgaagcttggatgaaactaag 95963
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119884 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 119825 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119824 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 119765 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119764 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 119705 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119704 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 119645 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119644 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 119585 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119584 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 119525 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119524 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 119465 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119464 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 119405 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119404 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 119345 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 119344 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 119286 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 119285 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 119227 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 119226 tccatgaccaggatgaagcttggatgaaactaag 119193 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95272 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 95331 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95332 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 95391 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95392 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 95451 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95452 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 95511 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95512 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 95571 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95572 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 95631 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95632 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 95691 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95692 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 95751 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95752 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 95811 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 95812 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 95870 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 95871 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 95929 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 95930 tccatgaccaggatgaagcttggatgaaactaag 95963
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119833 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 119774 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119773 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 119714 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119713 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 119654 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119653 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 119594 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119593 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 119534 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119533 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 119474 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119473 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 119414 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119413 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 119354 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119353 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 119294 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 119293 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 119235 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 119234 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 119176 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 119175 tccatgaccaggatgaagcttggatgaaactaag 119142 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95217 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 95276 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95277 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 95336 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95337 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 95396 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95397 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 95456 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95457 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 95516 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95517 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 95576 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95577 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 95636 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95637 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 95696 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95697 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 95756 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 95757 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 95815 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 95816 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 95874 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 95875 tccatgaccaggatgaagcttggatgaaactaag 95908
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507850 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 31507909 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 31507910 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 31507969 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507970 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 31508029 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508030 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 31508089 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508090 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 31508149 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 31508150 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 31508209 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508210 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 31508269 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508270 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 31508329 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508330 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 31508389 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 31508390 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 31508448 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 31508449 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 31508507 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 31508508 tccatgaccaggatgaagcttggatgaaactaag 31508541
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84746 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 84687 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 84686 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 84627 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84626 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 84567 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84566 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 84507 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84506 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 84447 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 84446 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 84387 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84386 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 84327 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84326 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 84267 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84266 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 84207 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 84206 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 84148 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 84147 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 84089 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 84088 tccatgaccaggatgaagcttggatgaaactaag 84055
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119853 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 119794 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119793 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 119734 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119733 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 119674 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119673 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 119614 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119613 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 119554 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119553 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 119494 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119493 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 119434 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119433 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 119374 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119373 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 119314 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 119313 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 119255 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 119254 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 119196 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 119195 tccatgaccaggatgaagcttggatgaaactaag 119162 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95265 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 95324 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95325 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 95384 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95385 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 95444 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95445 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 95504 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95505 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 95564 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95565 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 95624 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95625 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 95684 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95685 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 95744 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95745 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 95804 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 95805 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 95863 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 95864 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 95922 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 95923 tccatgaccaggatgaagcttggatgaaactaag 95956
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58572 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 58513 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 58512 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 58453 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58452 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 58393 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58392 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 58333 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58332 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 58273 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 58272 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 58213 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58212 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 58153 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58152 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 58093 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58092 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 58033 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 58032 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 57974 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 57973 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 57915 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 57914 tccatgaccaggatgaagcttggatgaaactaag 57881
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268199 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 9268258 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9268259 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 9268318 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268319 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 9268378 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268379 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 9268438 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268439 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 9268498 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9268499 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 9268558 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268559 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 9268618 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268619 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 9268678 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268679 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 9268738 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 9268739 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 9268797 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 9268798 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 9268856 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 9268857 tccatgaccaggatgaagcttggatgaaactaag 9268890 Score = 1312 bits (662), Expect = 0.0 Identities = 688/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227699 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 9227758 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9227759 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 9227818 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227819 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 9227878 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227879 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 9227938 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227939 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 9227998 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9227999 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 9228058 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228059 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 9228118 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228119 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 9228178 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228179 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 9228238 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 9228239 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 9228297 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 9228298 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctaggtgatcta 9228356 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 9228357 tccatgaccaggatgaagcttggatgaaactaag 9228390 Score = 1312 bits (662), Expect = 0.0 Identities = 688/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056113 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 9056172 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9056173 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 9056232 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056233 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 9056292 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056293 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 9056352 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056353 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 9056412 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 9056413 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgtgt 9056472 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056473 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 9056532 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056533 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 9056592 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056593 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 9056652 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 9056653 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 9056711 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 9056712 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 9056770 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 9056771 tccatgaccaggatgaagcttggatgaaactaag 9056804 Score = 1306 bits (659), Expect = 0.0 Identities = 687/694 (98%), Gaps = 3/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164288 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 9164347 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9164348 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 9164407 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164408 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 9164467 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164468 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 9164527 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164528 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 9164587 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9164588 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 9164647 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164648 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 9164707 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164708 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 9164767 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164768 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 9164827 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 9164828 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 9164886 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 9164887 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa--ctaggtgatcta 9164944 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 9164945 tccatgaccaggatgaagcttggatgaaactaag 9164978 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 401 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 460 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 461 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 507 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938184 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 19938243 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 19938244 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 19938303 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938304 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 19938363 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938364 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 19938423 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938424 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 19938483 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 19938484 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 19938543 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938544 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 19938603 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938604 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 19938663 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938664 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 19938723 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 19938724 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 19938782 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 19938783 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 19938841 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 19938842 tccatgaccaggatgaagcttggatgaaactaag 19938875 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277247 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 10277188 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10277187 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 10277128 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277127 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 10277068 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277067 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 10277008 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277007 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 10276948 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10276947 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 10276888 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276887 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 10276828 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276827 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 10276768 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276767 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 10276708 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 10276707 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 10276649 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10276648 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 10276590 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 10276589 tccatgaccaggatgaagcttggatgaaactaag 10276556 Score = 1312 bits (662), Expect = 0.0 Identities = 688/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387051 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 10387110 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10387111 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 10387170 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387171 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 10387230 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387231 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 10387290 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387291 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 10387350 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10387351 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 10387410 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387411 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 10387470 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387471 accgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 10387530 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387531 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 10387590 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 10387591 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 10387649 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10387650 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 10387708 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 10387709 tccatgaccaggatgaagcttggatgaaactaag 10387742 Score = 61.9 bits (31), Expect = 3e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 419 agtaccgtgagggaaaggtgaaaagaacccc 449 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 244 ttgtgctgctaggcgaagcggttgagtgc 272 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598366 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 31598425 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 31598426 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 31598485 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598486 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 31598545 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598546 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 31598605 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598606 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 31598665 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 31598666 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 31598725 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598726 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 31598785 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598786 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 31598845 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598846 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 31598905 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 31598906 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 31598964 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 31598965 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 31599023 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 31599024 tccatgaccaggatgaagcttggatgaaactaag 31599057
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525682 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 33525741 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 33525742 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 33525801 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525802 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 33525861 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525862 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 33525921 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525922 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 33525981 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 33525982 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 33526041 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526042 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 33526101 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526102 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 33526161 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526162 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 33526221 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 33526222 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 33526280 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 33526281 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 33526339 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 33526340 tccatgaccaggatgaagcttggatgaaactaag 33526373 Score = 319 bits (161), Expect = 7e-84 Identities = 174/177 (98%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 423 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 483 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 542 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 543 gccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgta 599 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgta 16677926 Score = 194 bits (98), Expect = 3e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 437 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 496 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 497 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 546 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 3e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 430 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 468 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttc 27 |||| ||||||||||||||||||||| Sbjct: 19455171 gggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47859 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 47800 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 47799 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 47740 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47739 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 47680 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47679 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 47620 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47619 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 47560 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 47559 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 47500 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47499 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 47440 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47439 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 47380 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47379 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 47320 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 47319 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 47261 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 47260 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 47202 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 47201 tccatgaccaggatgaagcttggatgaaactaag 47168
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70879 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 70938 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 70939 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 70998 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70999 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 71058 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71059 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 71118 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71119 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 71178 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 71179 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 71238 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71239 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 71298 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71299 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 71358 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71359 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 71418 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 71419 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 71477 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 71478 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 71536 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 71537 tccatgaccaggatgaagcttggatgaaactaag 71570 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 110 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 111 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 170 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 230 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 290 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 291 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 350 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 351 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 410 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 470 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 471 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 530 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 590 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 591 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 649 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 650 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 708 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 709 tccatgaccaggatgaagcttggatgaaactaag 742
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949460 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 19949519 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 19949520 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 19949579 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949580 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 19949639 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949640 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 19949699 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949700 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 19949759 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 19949760 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 19949819 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949820 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 19949879 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949880 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 19949939 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949940 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 19949999 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 19950000 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 19950058 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 19950059 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 19950117 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 19950118 tccatgaccaggatgaagcttggatgaaactaag 19950151 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283286 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 10283227 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10283226 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 10283167 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283166 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 10283107 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283106 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 10283047 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283046 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 10282987 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10282986 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 10282927 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282926 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 10282867 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282866 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 10282807 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282806 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 10282747 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 10282746 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 10282688 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10282687 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 10282629 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 10282628 tccatgaccaggatgaagcttggatgaaactaag 10282595 Score = 1312 bits (662), Expect = 0.0 Identities = 688/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393090 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 10393149 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10393150 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 10393209 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393210 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 10393269 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393270 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 10393329 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393330 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 10393389 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10393390 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 10393449 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393450 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 10393509 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393510 accgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 10393569 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393570 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 10393629 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 10393630 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 10393688 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10393689 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 10393747 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 10393748 tccatgaccaggatgaagcttggatgaaactaag 10393781 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 244 ttgtgctgctaggcgaagcggttgagtgc 272 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119827 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 119768 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119767 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 119708 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119707 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 119648 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119647 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 119588 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119587 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 119528 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119527 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 119468 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119467 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 119408 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119407 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 119348 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119347 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 119288 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 119287 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 119229 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 119228 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 119170 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 119169 tccatgaccaggatgaagcttggatgaaactaag 119136 Score = 1320 bits (666), Expect = 0.0 Identities = 689/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95212 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 95271 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95272 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 95331 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95332 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 95391 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95392 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 95451 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95452 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 95511 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95512 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 95571 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95572 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 95631 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95632 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 95691 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95692 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 95751 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 95752 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 95810 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 95811 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 95869 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 95870 tccatgaccaggatgaagcttggatgaaactaag 95903
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1312 bits (662), Expect = 0.0 Identities = 688/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 871 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 870 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 811 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 751 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 691 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 631 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 630 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 571 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 511 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 510 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 451 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 391 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 390 agccggcgactcataggcagtggc-ttggttaagggaatggaacccaccggagccgtagc 332 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 331 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 273 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 272 tccatgaccaggatgaagcttggatgaaactaag 239
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1312 bits (662), Expect = 0.0 Identities = 688/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14039 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 14098 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 14099 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 14158 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14159 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 14218 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14219 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 14278 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14279 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 14338 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 14339 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgtgt 14398 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14399 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 14458 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14459 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 14518 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14519 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 14578 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 14579 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 14637 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 14638 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 14696 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 14697 tccatgaccaggatgaagcttggatgaaactaag 14730 Score = 1306 bits (659), Expect = 0.0 Identities = 687/694 (98%), Gaps = 3/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122314 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 122373 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 122374 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 122433 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122434 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 122493 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122494 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 122553 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122554 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 122613 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 122614 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 122673 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122674 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 122733 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122734 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 122793 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122794 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 122853 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 122854 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 122912 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 122913 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa--ctaggtgatcta 122970 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 122971 tccatgaccaggatgaagcttggatgaaactaag 123004
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1312 bits (662), Expect = 0.0 Identities = 688/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140847 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 140906 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 140907 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 140966 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140967 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 141026 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141027 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 141086 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141087 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 141146 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 141147 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcctgtgt 141206 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141207 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 141266 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141267 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 141326 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141327 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 141386 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 141387 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 141445 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 141446 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 141504 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 141505 tccatgaccaggatgaagcttggatgaaactaag 141538
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1312 bits (662), Expect = 0.0 Identities = 688/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93443 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 93502 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 93503 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 93562 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93563 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 93622 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93623 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 93682 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93683 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 93742 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 93743 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 93802 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93803 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 93862 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 93863 accgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 93922 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93923 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 93982 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 93983 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 94041 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 94042 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 94100 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 94101 tccatgaccaggatgaagcttggatgaaactaag 94134
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1312 bits (662), Expect = 0.0 Identities = 688/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20274 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 20333 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 20334 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 20393 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20394 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 20453 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20454 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 20513 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20514 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 20573 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 20574 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 20633 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20634 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 20693 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20694 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 20753 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20754 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 20813 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 20814 agccggcgactcataggcagtggc-ttggttaagggaatggaacccaccggagccgtagc 20872 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 20873 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 20931 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 20932 tccatgaccaggatgaagcttggatgaaactaag 20965 Score = 1296 bits (654), Expect = 0.0 Identities = 686/694 (98%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44844 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 44785 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 44784 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 44725 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44724 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 44665 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44664 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 44605 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44604 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 44545 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 44544 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 44485 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44484 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 44425 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44424 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 44365 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44364 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 44305 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||| ||||||| |||||||||||| Sbjct: 44304 agccggcgactcataggcagtggc-ttggttaagggaatggaaccctccggagccgtagt 44246 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 44245 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 44187 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 44186 tccatgaccaggatgaagcttggatgaaactaag 44153
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1312 bits (662), Expect = 0.0 Identities = 688/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1473 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 1414 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1413 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 1354 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1353 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 1294 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1293 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 1234 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1233 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 1174 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1173 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 1114 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1113 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 1054 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 994 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 934 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 933 agccggcgactcataggcagtggc-ttggttaagggaatggaacccaccggagccgtagc 875 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 874 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 816 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 815 tccatgaccaggatgaagcttggatgaaactaag 782
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1312 bits (662), Expect = 0.0 Identities = 688/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27507 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 27566 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 27567 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 27626 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27627 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 27686 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27687 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 27746 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27747 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 27806 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 27807 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 27866 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27867 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 27926 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 27927 accgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 27986 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27987 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 28046 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 28047 agccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 28105 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 28106 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 28164 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 28165 tccatgaccaggatgaagcttggatgaaactaag 28198
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1312 bits (662), Expect = 0.0 Identities = 688/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123683 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 123624 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 123623 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 123564 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123563 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 123504 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123503 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 123444 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123443 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 123384 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 123383 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 123324 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123323 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 123264 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123263 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 123204 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123203 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 123144 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 123143 agccggcgactcataggcagtggc-ttggttaagggaatggaacccaccggagccgtagc 123085 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 123084 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 123026 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 123025 tccatgaccaggatgaagcttggatgaaactaag 122992 Score = 1312 bits (662), Expect = 0.0 Identities = 688/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99154 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 99213 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 99214 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 99273 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99274 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 99333 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99334 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 99393 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99394 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 99453 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 99454 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 99513 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99514 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 99573 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99574 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 99633 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99634 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 99693 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 99694 agccggcgactcataggcagtggc-ttggttaagggaatggaacccaccggagccgtagc 99752 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 99753 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 99811 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 99812 tccatgaccaggatgaagcttggatgaaactaag 99845
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1312 bits (662), Expect = 0.0 Identities = 688/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124400 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 124341 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 124340 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 124281 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124280 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 124221 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124220 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 124161 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124160 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 124101 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 124100 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 124041 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124040 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 123981 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123980 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 123921 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123920 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 123861 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 123860 agccggcgactcataggcagtggc-ttggttaagggaatggaacccaccggagccgtagc 123802 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 123801 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 123743 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 123742 tccatgaccaggatgaagcttggatgaaactaag 123709 Score = 1312 bits (662), Expect = 0.0 Identities = 688/694 (99%), Gaps = 2/694 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99831 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 99890 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 99891 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 99950 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99951 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 100010 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100011 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 100070 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100071 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 100130 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 100131 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 100190 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100191 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 100250 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100251 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 100310 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100311 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 100370 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 100371 agccggcgactcataggcagtggc-ttggttaagggaatggaacccaccggagccgtagc 100429 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 100430 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 100488 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 100489 tccatgaccaggatgaagcttggatgaaactaag 100522
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1304 bits (658), Expect = 0.0 Identities = 687/694 (98%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242082 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 9242023 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9242022 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 9241963 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241962 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 9241903 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241902 agcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 9241843 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241842 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 9241783 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9241782 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 9241723 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241722 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 9241663 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241662 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 9241603 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241602 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 9241543 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 9241542 agctggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 9241484 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 9241483 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 9241425 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 9241424 tccatgaccaggatgaagcttggatgaaactaag 9241391 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 126 actgaaacatcttagtagccagaggaaaagaaag 159 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1304 bits (658), Expect = 0.0 Identities = 687/694 (98%), Gaps = 2/694 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53295 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 53236 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 53235 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 53176 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53175 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 53116 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53115 agcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 53056 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53055 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 52996 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 52995 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 52936 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52935 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 52876 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52875 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 52816 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52815 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 52756 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 52755 agctggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgtagc 52697 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 52696 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 52638 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||| Sbjct: 52637 tccatgaccaggatgaagcttggatgaaactaag 52604
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1263 bits (637), Expect = 0.0 Identities = 682/693 (98%), Gaps = 3/693 (0%) Strand = Plus / Minus Query: 3 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123621 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 123562 Query: 63 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 122 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 123561 caaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctgg 123502 Query: 123 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123501 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 123442 Query: 183 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc 242 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 123441 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagc 123382 Query: 243 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagcc 302 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 123381 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagcc 123322 Query: 303 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 362 || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123321 gatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtg 123263 Query: 363 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123262 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 123203 Query: 423 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123202 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 123143 Query: 483 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123142 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 123083 Query: 543 gccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagcg 602 ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 123082 gccggcgactcataggcagtggc-ttggttaagggaatggaacccaccggagccgtagcg 123024 Query: 603 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctat 662 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 123023 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatctat 122965 Query: 663 ccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||||||||||||| Sbjct: 122964 ccatgaccaggatgaagcttggatgaaactaag 122932 Score = 1263 bits (637), Expect = 0.0 Identities = 682/693 (98%), Gaps = 3/693 (0%) Strand = Plus / Plus Query: 3 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99116 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 99175 Query: 63 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 122 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 99176 caaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctgg 99235 Query: 123 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99236 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 99295 Query: 183 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc 242 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 99296 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagc 99355 Query: 243 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagcc 302 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 99356 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagcc 99415 Query: 303 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 362 || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 99416 gatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtg 99474 Query: 363 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99475 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 99534 Query: 423 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99535 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 99594 Query: 483 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99595 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 99654 Query: 543 gccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagcg 602 ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 99655 gccggcgactcataggcagtggc-ttggttaagggaatggaacccaccggagccgtagcg 99713 Query: 603 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctat 662 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 99714 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatctat 99772 Query: 663 ccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||||||||||||| Sbjct: 99773 ccatgaccaggatgaagcttggatgaaactaag 99805
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1263 bits (637), Expect = 0.0 Identities = 682/693 (98%), Gaps = 3/693 (0%) Strand = Plus / Plus Query: 3 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5469 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 5528 Query: 63 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 122 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 5529 caaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctgg 5588 Query: 123 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5589 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 5648 Query: 183 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc 242 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 5649 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagc 5708 Query: 243 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagcc 302 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5709 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagcc 5768 Query: 303 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 362 || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5769 gatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtg 5827 Query: 363 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5828 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 5887 Query: 423 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5888 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 5947 Query: 483 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5948 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 6007 Query: 543 gccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagcg 602 ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 6008 gccggcgactcataggcagtggc-ttggttaagggaatggaacccaccggagccgtagcg 6066 Query: 603 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctat 662 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 6067 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatctat 6125 Query: 663 ccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||||||||||||| Sbjct: 6126 ccatgaccaggatgaagcttggatgaaactaag 6158
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1263 bits (637), Expect = 0.0 Identities = 682/693 (98%), Gaps = 3/693 (0%) Strand = Plus / Plus Query: 3 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 62 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57 ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcc 116 Query: 63 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 122 |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 117 caaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacctgg 176 Query: 123 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 cgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcg 236 Query: 183 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc 242 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 237 gcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaagc 296 Query: 243 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagcc 302 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 297 gttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtagcc 356 Query: 303 gaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtg 362 || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 gatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtg 415 Query: 363 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 aatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta 475 Query: 423 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 535 Query: 483 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 595 Query: 543 gccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagcg 602 ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 596 gccggcgactcataggcagtggc-ttggttaagggaatggaacccaccggagccgtagcg 654 Query: 603 aaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctat 662 |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 655 aaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatctat 713 Query: 663 ccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||||||||||||| Sbjct: 714 ccatgaccaggatgaagcttggatgaaactaag 746
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1235 bits (623), Expect = 0.0 Identities = 646/651 (99%), Gaps = 2/651 (0%) Strand = Plus / Plus Query: 45 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 104 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 105 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 165 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 225 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 285 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 344 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 345 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 405 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 465 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 480 Query: 525 gtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaa 584 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 481 gtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaa 539 Query: 585 cccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggaccc 644 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 540 cccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggaccc 599 Query: 645 gaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 600 gaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 649
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 1185 bits (598), Expect = 0.0 Identities = 624/630 (99%), Gaps = 2/630 (0%) Strand = Plus / Plus Query: 49 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 108 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 109 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 169 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 229 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 289 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 348 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 349 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 409 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 469 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 480 Query: 529 ctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaaccca 588 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 481 ctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaaccca 539 Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 648 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 540 ccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa- 598 Query: 649 cctgggtgatctatccatgaccaggatgaa 678 |||||||||||||||||||||||||||||| Sbjct: 599 cctgggtgatctatccatgaccaggatgaa 628
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1118 bits (564), Expect = 0.0 Identities = 577/580 (99%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 107 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 108 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 167 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 227 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 228 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 287 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 347 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 348 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 407 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 467 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 527 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 528 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 587 Query: 542 agccggcgactcataggcagtggctttggttaagggaacg 581 |||||||||||||||||||||||| ||||||||||||||| Sbjct: 588 agccggcgactcataggcagtggc-ttggttaagggaacg 626
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1100 bits (555), Expect = 0.0 Identities = 574/579 (99%), Gaps = 1/579 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 67 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 68 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 127 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 187 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 188 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcagtacaag 247 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 307 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 308 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 367 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 427 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 487 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 488 ctgagctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctgttgaagaatg 547 Query: 542 agccggcgactcataggcagtggctttggttaagggaac 580 |||||||||||||||||||||||| |||||||||||||| Sbjct: 548 agccggcgactcataggcagtggc-ttggttaagggaac 585
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 1094 bits (552), Expect = 0.0 Identities = 662/694 (95%), Gaps = 11/694 (1%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134170 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 134111 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 134110 ccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 134052 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134051 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 133992 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133991 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 133932 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||| || || ||| |||||||||||||| | ||||||||||| Sbjct: 133931 cgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagagtccagtagc 133872 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 133871 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 133812 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133811 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 133752 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 133751 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 133694 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 133693 -taagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatg 133635 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 133634 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 133581 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 133580 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 133522 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 133521 tccatgaccaggatgaagcttgggtgaaactaag 133488 Score = 1094 bits (552), Expect = 0.0 Identities = 662/694 (95%), Gaps = 11/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103801 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 103860 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 103861 ccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 103919 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103920 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 103979 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103980 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 104039 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||| || || ||| |||||||||||||| | ||||||||||| Sbjct: 104040 cgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagagtccagtagc 104099 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104100 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 104159 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104160 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 104219 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 104220 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 104277 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 104278 -taagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatg 104336 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 104337 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 104390 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 104391 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 104449 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 104450 tccatgaccaggatgaagcttgggtgaaactaag 104483
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 1078 bits (544), Expect = 0.0 Identities = 660/694 (95%), Gaps = 11/694 (1%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139533 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 139474 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 139473 ccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 139415 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139414 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 139355 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139354 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 139295 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| |||||||||||||||||||| |||| | |||||||||||||| | ||||||||||| Sbjct: 139294 cgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagagtccagtagc 139235 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 139234 cgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 139175 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139174 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 139115 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 139114 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 139057 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 139056 -tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatg 138998 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| Sbjct: 138997 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccatagc 138944 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 138943 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 138885 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 138884 tccatgaccaggatgaagcttgggtgaaactaag 138851 Score = 1078 bits (544), Expect = 0.0 Identities = 660/694 (95%), Gaps = 11/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110412 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 110471 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 110472 ccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 110530 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110531 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 110590 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110591 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 110650 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| |||||||||||||||||||| |||| | |||||||||||||| | ||||||||||| Sbjct: 110651 cgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagagtccagtagc 110710 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 110711 cgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 110770 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110771 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 110830 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 110831 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 110888 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 110889 -tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatg 110947 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| Sbjct: 110948 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccatagc 111001 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 111002 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 111060 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 111061 tccatgaccaggatgaagcttgggtgaaactaag 111094
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 1078 bits (544), Expect = 0.0 Identities = 660/694 (95%), Gaps = 11/694 (1%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127811 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 127752 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 127751 ccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 127693 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 127692 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagc 127633 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127632 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 127573 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||||| |||||| |||||||||||||| | ||||||||||| Sbjct: 127572 cgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagc 127513 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 127512 cgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 127453 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127452 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 127393 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| Sbjct: 127392 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg 127333 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 127332 ---agctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatg 127276 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||||| ||||||||||| |||||| ||||||||| Sbjct: 127275 agccggcgactcataggcagtggctt-ggttaagggaat-----ccaccgtagccgtagc 127222 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 127221 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 127163 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 127162 tccatgaccaggatgaagcttgggtgaaactaag 127129 Score = 1078 bits (544), Expect = 0.0 Identities = 660/694 (95%), Gaps = 11/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107111 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 107170 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 107171 ccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 107229 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 107230 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagc 107289 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107290 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 107349 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||||| |||||| |||||||||||||| | ||||||||||| Sbjct: 107350 cgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagc 107409 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107410 cgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 107469 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107470 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 107529 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||| Sbjct: 107530 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgtg 107589 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 107590 ---agctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatg 107646 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||||| ||||||||||| |||||| ||||||||| Sbjct: 107647 agccggcgactcataggcagtggctt-ggttaagggaat-----ccaccgtagccgtagc 107700 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107701 gaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggtgatcta 107759 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 107760 tccatgaccaggatgaagcttgggtgaaactaag 107793
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 1070 bits (540), Expect = 0.0 Identities = 659/694 (94%), Gaps = 11/694 (1%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142055 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 141996 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 141995 ccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 141937 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141936 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 141877 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141876 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 141817 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||||||||||| | |||||||||||||| | ||||||||| | Sbjct: 141816 cgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagagtccagtaac 141757 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 141756 cgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 141697 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 141696 gaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagt 141637 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 141636 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 141579 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 141578 -tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatg 141520 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 141519 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 141466 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 141465 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 141407 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 141406 tccatgaccaggatgaagcttgggtgaaactaag 141373 Score = 1070 bits (540), Expect = 0.0 Identities = 659/694 (94%), Gaps = 11/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111602 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 111661 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 111662 ccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 111720 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111721 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 111780 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111781 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 111840 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||||||||||| | |||||||||||||| | ||||||||| | Sbjct: 111841 cgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagagtccagtaac 111900 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 111901 cgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 111960 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 111961 gaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagt 112020 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 112021 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 112078 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct: 112079 -tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatg 112137 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 112138 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 112191 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 112192 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 112250 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 112251 tccatgaccaggatgaagcttgggtgaaactaag 112284
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 1061 bits (535), Expect = 0.0 Identities = 658/694 (94%), Gaps = 15/694 (2%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134928 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 134869 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 134868 ccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 134810 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134809 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 134750 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134749 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 134690 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||| || |||||| |||||||||||||||| ||||||||||| Sbjct: 134689 cgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagagtccagtagc 134630 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 134629 cgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtggaatcccgtgt 134570 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134569 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 134510 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 134509 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 134452 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 134451 -tgagctcccaagcagtgggaggagaa----atctctgaccgcgtgcctgttgaagaatg 134397 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 134396 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 134343 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 134342 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 134284 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 134283 tccatgaccaggatgaagcttgggtgaaactaag 134250 Score = 1061 bits (535), Expect = 0.0 Identities = 658/694 (94%), Gaps = 15/694 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105354 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 105413 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 105414 ccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 105472 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105473 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 105532 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105533 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 105592 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||| || |||||| |||||||||||||||| ||||||||||| Sbjct: 105593 cgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagagtccagtagc 105652 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| Sbjct: 105653 cgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtggaatcccgtgt 105712 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105713 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 105772 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 105773 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 105830 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 105831 -tgagctcccaagcagtgggaggagaa----atctctgaccgcgtgcctgttgaagaatg 105885 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 105886 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 105939 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 105940 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 105998 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 105999 tccatgaccaggatgaagcttgggtgaaactaag 106032
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 1057 bits (533), Expect = 0.0 Identities = 658/694 (94%), Gaps = 13/694 (1%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136538 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 136479 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 136478 ccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 136420 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136419 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 136360 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136359 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 136300 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||||| Sbjct: 136299 cgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagc 136240 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 136239 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 136180 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136179 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 136120 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 136119 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 136062 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| | || | ||||||||||||||||||||||||||| Sbjct: 136061 -taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatg 136005 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 136004 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 135951 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 135950 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 135892 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 135891 tccatgaccaggatgaagcttgggtgaaactaag 135858 Score = 1057 bits (533), Expect = 0.0 Identities = 658/694 (94%), Gaps = 13/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105887 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 105946 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 105947 ccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 106005 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106006 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 106065 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106066 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 106125 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||||| Sbjct: 106126 cgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagc 106185 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106186 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 106245 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106246 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 106305 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 106306 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 106363 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| | || | ||||||||||||||||||||||||||| Sbjct: 106364 -taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatg 106420 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 106421 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 106474 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 106475 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 106533 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 106534 tccatgaccaggatgaagcttgggtgaaactaag 106567
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 1039 bits (524), Expect = 0.0 Identities = 656/694 (94%), Gaps = 12/694 (1%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132722 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 132663 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 132662 ccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 132604 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132603 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 132544 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132543 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 132484 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||||||| Sbjct: 132483 cgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagc 132424 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132423 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 132364 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132363 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 132304 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 132303 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 132246 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| | | | ||||||||||||||||||||||||||| Sbjct: 132245 -taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatg 132188 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 132187 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 132134 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 132133 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 132075 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 132074 tccatgaccaggatgaagcttgggtgaaactaag 132041 Score = 1039 bits (524), Expect = 0.0 Identities = 656/694 (94%), Gaps = 12/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104156 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 104215 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 104216 ccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 104274 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104275 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 104334 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104335 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 104394 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||||||| Sbjct: 104395 cgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagc 104454 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104455 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 104514 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104515 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 104574 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 104575 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 104632 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| | | | ||||||||||||||||||||||||||| Sbjct: 104633 -taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatg 104690 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 104691 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 104744 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 104745 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 104803 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 104804 tccatgaccaggatgaagcttgggtgaaactaag 104837
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 1039 bits (524), Expect = 0.0 Identities = 656/694 (94%), Gaps = 12/694 (1%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132715 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 132656 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 132655 ccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 132597 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132596 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 132537 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132536 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 132477 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||||||| Sbjct: 132476 cgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagc 132417 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132416 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 132357 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132356 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 132297 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 132296 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 132239 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| | | | ||||||||||||||||||||||||||| Sbjct: 132238 -taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatg 132181 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 132180 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 132127 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 132126 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 132068 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 132067 tccatgaccaggatgaagcttgggtgaaactaag 132034 Score = 1039 bits (524), Expect = 0.0 Identities = 656/694 (94%), Gaps = 12/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104154 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 104213 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 104214 ccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 104272 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104273 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 104332 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104333 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 104392 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||||||| Sbjct: 104393 cgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagc 104452 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104453 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 104512 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104513 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 104572 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 104573 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 104630 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| | | | ||||||||||||||||||||||||||| Sbjct: 104631 -taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatg 104688 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 104689 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 104742 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 104743 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 104801 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 104802 tccatgaccaggatgaagcttgggtgaaactaag 104835
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 1031 bits (520), Expect = 0.0 Identities = 655/694 (94%), Gaps = 12/694 (1%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131614 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 131555 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 131554 ccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 131496 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131495 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 131436 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131435 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 131376 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||||||| Sbjct: 131375 cgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagc 131316 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 131315 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 131256 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131255 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 131196 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 131195 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 131138 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| | | | ||||||||||||||||||||||||||| Sbjct: 131137 -taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatg 131080 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 131079 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 131026 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 131025 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 130967 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 130966 tccatgaccaggatgaagcttgggtgaaactaag 130933 Score = 1031 bits (520), Expect = 0.0 Identities = 655/694 (94%), Gaps = 12/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103021 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 103080 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 103081 ccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 103139 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103140 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 103199 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103200 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 103259 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||||||| Sbjct: 103260 cgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagc 103319 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 103320 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 103379 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103380 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 103439 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 103440 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 103497 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| | | | ||||||||||||||||||||||||||| Sbjct: 103498 -taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatg 103555 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 103556 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 103609 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 103610 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 103668 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 103669 tccatgaccaggatgaagcttgggtgaaactaag 103702
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 1031 bits (520), Expect = 0.0 Identities = 655/694 (94%), Gaps = 12/694 (1%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 132945 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 132886 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 132885 ccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctg 132827 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132826 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 132767 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 132766 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaag 132707 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| Sbjct: 132706 cgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagc 132647 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132646 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 132587 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132586 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 132527 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 132526 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 132469 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| | || ||||||||||||||||||||||||||| Sbjct: 132468 -taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatg 132411 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 132410 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 132357 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 132356 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 132298 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 || |||||||||||||||||||| |||||||||| Sbjct: 132297 tctatgaccaggatgaagcttgggtgaaactaag 132264 Score = 1031 bits (520), Expect = 0.0 Identities = 655/694 (94%), Gaps = 12/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 103819 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 103878 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 103879 ccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctg 103937 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103938 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 103997 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 103998 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaag 104057 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| Sbjct: 104058 cgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagc 104117 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104118 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 104177 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104178 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 104237 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 104238 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 104295 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| | || ||||||||||||||||||||||||||| Sbjct: 104296 -taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatg 104353 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 104354 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 104407 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 104408 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 104466 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 || |||||||||||||||||||| |||||||||| Sbjct: 104467 tctatgaccaggatgaagcttgggtgaaactaag 104500
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1025 bits (517), Expect = 0.0 Identities = 537/541 (99%), Gaps = 2/541 (0%) Strand = Plus / Plus Query: 155 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 215 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 275 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 334 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 335 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 395 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 455 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 514 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 574 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 419 Query: 575 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 634 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 420 gggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 479 Query: 635 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 694 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 538 Query: 695 g 695 | Sbjct: 539 g 539
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 1023 bits (516), Expect = 0.0 Identities = 654/694 (94%), Gaps = 12/694 (1%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140307 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 140248 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 140247 ccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 140189 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140188 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 140129 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140128 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 140069 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||||| || ||| |||||||||||||| | ||||||||||| Sbjct: 140068 cgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagagtccagtagc 140009 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 140008 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 139949 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139948 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 139889 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 139888 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 139831 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | || ||||||||||||||||| | | | | ||||||||||||||||||||||||||| Sbjct: 139830 -taagttcccaagcagtgggaggag-acgggggctctgaccgcgtgcctgttgaagaatg 139773 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 139772 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 139719 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 139718 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 139660 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 139659 tccatgaccaggatgaagcttgggtgaaactaag 139626 Score = 1023 bits (516), Expect = 0.0 Identities = 654/694 (94%), Gaps = 12/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109753 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 109812 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 109813 ccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 109871 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109872 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 109931 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109932 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 109991 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||||| || ||| |||||||||||||| | ||||||||||| Sbjct: 109992 cgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagagtccagtagc 110051 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 110052 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 110111 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110112 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 110171 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 110172 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 110229 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | || ||||||||||||||||| | | | | ||||||||||||||||||||||||||| Sbjct: 110230 -taagttcccaagcagtgggaggag-acgggggctctgaccgcgtgcctgttgaagaatg 110287 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 110288 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 110341 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 110342 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 110400 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 110401 tccatgaccaggatgaagcttgggtgaaactaag 110434
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 1023 bits (516), Expect = 0.0 Identities = 654/694 (94%), Gaps = 12/694 (1%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 133906 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 133847 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 133846 ccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctg 133788 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133787 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 133728 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 133727 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaag 133668 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| Sbjct: 133667 cgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagc 133608 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133607 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 133548 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133547 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 133488 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 133487 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 133430 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| | || ||||||||||||||||||||||||||| Sbjct: 133429 -taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatg 133372 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 133371 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 133318 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 133317 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 133259 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 || |||||||||||||||||||| |||||||||| Sbjct: 133258 tctatgaccaggatgaagcttgggtgaaactaag 133225 Score = 1023 bits (516), Expect = 0.0 Identities = 654/694 (94%), Gaps = 12/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 104743 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 104802 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 104803 ccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctg 104861 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104862 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 104921 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 104922 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaag 104981 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| Sbjct: 104982 cgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagc 105041 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105042 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 105101 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105102 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 105161 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 105162 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 105219 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| | || ||||||||||||||||||||||||||| Sbjct: 105220 -taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatg 105277 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 105278 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 105331 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 105332 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 105390 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 || |||||||||||||||||||| |||||||||| Sbjct: 105391 tctatgaccaggatgaagcttgggtgaaactaag 105424
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1021 bits (515), Expect = 0.0 Identities = 535/539 (99%), Gaps = 2/539 (0%) Strand = Plus / Plus Query: 157 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 216 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 217 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 277 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 336 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 337 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 397 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 457 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 576 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagg 419 Query: 577 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 636 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 420 gaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 479 Query: 637 atggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 atggacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 537
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1021 bits (515), Expect = 0.0 Identities = 535/539 (99%), Gaps = 2/539 (0%) Strand = Plus / Plus Query: 157 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 216 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 217 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 277 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 336 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 337 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 397 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 457 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 576 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagg 419 Query: 577 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 636 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 420 gaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 479 Query: 637 atggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 atggacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 537
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1019 bits (514), Expect = 0.0 Identities = 534/538 (99%), Gaps = 2/538 (0%) Strand = Plus / Plus Query: 158 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 218 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 278 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 337 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 338 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 398 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 458 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaaggg 577 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaaggg 422 Query: 578 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 637 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 423 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctta 482 Query: 638 tggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 483 tggacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 539
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 1015 bits (512), Expect = 0.0 Identities = 653/694 (94%), Gaps = 12/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 52 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 111 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 112 ccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctg 170 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 230 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 231 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaaaaag 290 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| Sbjct: 291 cgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtagc 350 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 cgagagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 410 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 470 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 471 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 528 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| | || ||||||||||||||||||||||||||| Sbjct: 529 -taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaagaatg 586 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 587 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 640 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 641 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 699 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 || |||||||||||||||||||| |||||||||| Sbjct: 700 tctatgaccaggatgaagcttgggtgaaactaag 733
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 1015 bits (512), Expect = 0.0 Identities = 532/536 (99%), Gaps = 2/536 (0%) Strand = Plus / Plus Query: 160 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 220 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 280 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 339 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 340 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 400 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 460 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 520 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaa 579 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaa 419 Query: 580 cggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 639 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 420 cggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatg 479 Query: 640 gacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 gacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 534
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 1011 bits (510), Expect = 0.0 Identities = 654/695 (94%), Gaps = 14/695 (2%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136247 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 136188 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 136187 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 136129 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136128 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 136069 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136068 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 136009 Query: 242 cgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | || ||| |||||||||||||| |||||||||||| Sbjct: 136008 cgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtag 135949 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135948 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 135889 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135888 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 135829 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 135828 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 135770 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 135769 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 135714 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 135713 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 135660 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 135659 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 135601 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 135600 atccatgaccaggatgaagcttgggtgaaactaag 135566 Score = 1011 bits (510), Expect = 0.0 Identities = 654/695 (94%), Gaps = 14/695 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106383 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 106442 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 106443 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 106501 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106502 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 106561 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106562 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 106621 Query: 242 cgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | || ||| |||||||||||||| |||||||||||| Sbjct: 106622 cgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtag 106681 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106682 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 106741 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106742 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 106801 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 106802 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 106860 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 106861 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 106916 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 106917 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 106970 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 106971 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 107029 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 107030 atccatgaccaggatgaagcttgggtgaaactaag 107064
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 1011 bits (510), Expect = 0.0 Identities = 654/695 (94%), Gaps = 14/695 (2%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136885 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 136826 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 136825 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 136767 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136766 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 136707 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136706 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 136647 Query: 242 cgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||||| Sbjct: 136646 cgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtag 136587 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 136586 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 136527 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136526 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 136467 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 136466 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 136408 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 136407 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 136352 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 136351 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 136298 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 136297 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 136239 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 136238 atccatgaccaggatgaagcttgggtgaaactaag 136204 Score = 1011 bits (510), Expect = 0.0 Identities = 654/695 (94%), Gaps = 14/695 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106672 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 106731 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 106732 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 106790 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106791 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 106850 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106851 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 106910 Query: 242 cgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||||| Sbjct: 106911 cgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtag 106970 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 106971 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 107030 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107031 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 107090 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 107091 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 107149 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 107150 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 107205 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 107206 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 107259 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 107260 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 107318 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 107319 atccatgaccaggatgaagcttgggtgaaactaag 107353
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 1011 bits (510), Expect = 0.0 Identities = 654/695 (94%), Gaps = 14/695 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1577 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 1636 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 1637 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 1695 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1696 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 1755 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1756 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 1815 Query: 242 cgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | || ||| |||||||||||||| |||||||||||| Sbjct: 1816 cgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtag 1875 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1876 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 1935 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1936 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 1995 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 1996 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 2054 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 2055 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 2110 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 2111 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 2164 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 2165 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 2223 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 2224 atccatgaccaggatgaagcttgggtgaaactaag 2258
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 1011 bits (510), Expect = 0.0 Identities = 654/695 (94%), Gaps = 14/695 (2%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135493 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 135434 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 135433 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 135375 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135374 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 135315 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135314 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 135255 Query: 242 cgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||||| Sbjct: 135254 cgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtag 135195 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 135194 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 135135 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135134 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 135075 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 135074 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 135016 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 135015 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 134960 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 134959 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 134906 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 134905 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 134847 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 134846 atccatgaccaggatgaagcttgggtgaaactaag 134812 Score = 1011 bits (510), Expect = 0.0 Identities = 654/695 (94%), Gaps = 14/695 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105543 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 105602 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 105603 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 105661 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105662 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 105721 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105722 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 105781 Query: 242 cgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||||| Sbjct: 105782 cgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtag 105841 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 105842 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 105901 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105902 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 105961 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 105962 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 106020 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 106021 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 106076 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 106077 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 106130 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 106131 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 106189 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 106190 atccatgaccaggatgaagcttgggtgaaactaag 106224
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1011 bits (510), Expect = 0.0 Identities = 530/534 (99%), Gaps = 2/534 (0%) Strand = Plus / Plus Query: 158 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 218 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 278 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 337 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 338 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 398 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 458 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaaggg 577 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaaggg 419 Query: 578 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 637 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 420 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctta 479 Query: 638 tggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaac 691 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 tggacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaac 532
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 1011 bits (510), Expect = 0.0 Identities = 654/695 (94%), Gaps = 14/695 (2%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135628 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 135569 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 135568 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 135510 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135509 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 135450 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135449 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 135390 Query: 242 cgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||||| Sbjct: 135389 cgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtag 135330 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 135329 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 135270 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135269 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 135210 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 135209 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 135151 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 135150 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 135095 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 135094 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 135041 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 135040 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 134982 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 134981 atccatgaccaggatgaagcttgggtgaaactaag 134947 Score = 1011 bits (510), Expect = 0.0 Identities = 654/695 (94%), Gaps = 14/695 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105715 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 105774 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 105775 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 105833 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105834 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 105893 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105894 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 105953 Query: 242 cgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||||| Sbjct: 105954 cgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtag 106013 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 106014 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 106073 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106074 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 106133 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 106134 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 106192 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 106193 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 106248 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 106249 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 106302 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 106303 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 106361 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 106362 atccatgaccaggatgaagcttgggtgaaactaag 106396
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 1011 bits (510), Expect = 0.0 Identities = 654/695 (94%), Gaps = 14/695 (2%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135626 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 135567 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 135566 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 135508 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135507 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 135448 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135447 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 135388 Query: 242 cgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||||| Sbjct: 135387 cgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtag 135328 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 135327 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 135268 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135267 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 135208 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 135207 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 135149 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 135148 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 135093 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 135092 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 135039 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 135038 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 134980 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 134979 atccatgaccaggatgaagcttgggtgaaactaag 134945 Score = 1011 bits (510), Expect = 0.0 Identities = 654/695 (94%), Gaps = 14/695 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105712 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 105771 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 105772 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 105830 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105831 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 105890 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105891 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 105950 Query: 242 cgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||||| Sbjct: 105951 cgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtag 106010 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 106011 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 106070 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106071 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 106130 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 106131 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 106189 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 106190 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 106245 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 106246 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 106299 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 106300 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 106358 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 106359 atccatgaccaggatgaagcttgggtgaaactaag 106393
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 1011 bits (510), Expect = 0.0 Identities = 654/695 (94%), Gaps = 14/695 (2%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135538 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 135479 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 135478 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 135420 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135419 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 135360 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135359 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 135300 Query: 242 cgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||||| Sbjct: 135299 cgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtag 135240 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 135239 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 135180 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135179 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 135120 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 135119 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 135061 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 135060 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 135005 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 135004 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 134951 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 134950 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 134892 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 134891 atccatgaccaggatgaagcttgggtgaaactaag 134857 Score = 1011 bits (510), Expect = 0.0 Identities = 654/695 (94%), Gaps = 14/695 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105590 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 105649 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 105650 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 105708 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105709 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 105768 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105769 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 105828 Query: 242 cgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||||| Sbjct: 105829 cgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtag 105888 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 105889 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 105948 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105949 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 106008 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 106009 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 106067 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 106068 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 106123 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 106124 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 106177 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 106178 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 106236 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 106237 atccatgaccaggatgaagcttgggtgaaactaag 106271
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 1011 bits (510), Expect = 0.0 Identities = 654/695 (94%), Gaps = 14/695 (2%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136245 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 136186 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 136185 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 136127 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136126 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 136067 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136066 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 136007 Query: 242 cgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | || ||| |||||||||||||| |||||||||||| Sbjct: 136006 cgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtag 135947 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135946 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 135887 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135886 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 135827 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 135826 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 135768 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 135767 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 135712 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 135711 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 135658 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 135657 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 135599 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 135598 atccatgaccaggatgaagcttgggtgaaactaag 135564 Score = 1011 bits (510), Expect = 0.0 Identities = 654/695 (94%), Gaps = 14/695 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106381 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 106440 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 106441 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 106499 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106500 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 106559 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106560 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 106619 Query: 242 cgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | || ||| |||||||||||||| |||||||||||| Sbjct: 106620 cgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtag 106679 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106680 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 106739 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106740 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 106799 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 106800 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 106858 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 106859 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 106914 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 106915 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 106968 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 106969 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 107027 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 107028 atccatgaccaggatgaagcttgggtgaaactaag 107062
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 1007 bits (508), Expect = 0.0 Identities = 652/694 (93%), Gaps = 12/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 61 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 120 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 121 ccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 179 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 180 gcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagc 239 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 299 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||| || |||||| |||||||||||||| | ||||||||||| Sbjct: 300 cgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggcgagagtccagtagc 359 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 360 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 419 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 479 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 480 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 537 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| | | | ||||||||||||||||||||||||||| Sbjct: 538 -taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaatg 595 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 596 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 649 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 650 gaaagcgagtcttcgtagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 708 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||| ||||||| |||||||||| Sbjct: 709 tccatgaccaggatggagcttgggtgaaactaag 742
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 1003 bits (506), Expect = 0.0 Identities = 653/695 (93%), Gaps = 14/695 (2%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135976 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggggattc 135917 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 135916 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 135858 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135857 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 135798 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135797 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 135738 Query: 242 cgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | || ||| |||||||||||||| |||||||||||| Sbjct: 135737 cgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtag 135678 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135677 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 135618 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135617 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 135558 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 135557 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 135499 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 135498 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 135443 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 135442 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 135389 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 135388 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 135330 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 135329 atccatgaccaggatgaagcttgggtgaaactaag 135295 Score = 1003 bits (506), Expect = 0.0 Identities = 653/695 (93%), Gaps = 14/695 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 106162 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggggattc 106221 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 106222 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 106280 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106281 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 106340 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106341 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 106400 Query: 242 cgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | || ||| |||||||||||||| |||||||||||| Sbjct: 106401 cgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtag 106460 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106461 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 106520 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106521 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 106580 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 106581 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 106639 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 106640 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 106695 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 106696 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 106749 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 106750 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 106808 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 106809 atccatgaccaggatgaagcttgggtgaaactaag 106843
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 1003 bits (506), Expect = 0.0 Identities = 653/695 (93%), Gaps = 14/695 (2%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135505 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 135446 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 135445 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 135387 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135386 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 135327 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135326 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 135267 Query: 242 cgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||||| Sbjct: 135266 cgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtag 135207 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 135206 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 135147 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135146 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 135087 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 135086 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 135028 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 135027 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 134972 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 |||||||||||| |||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 134971 gagccggcgactaataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 134918 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 134917 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 134859 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 134858 atccatgaccaggatgaagcttgggtgaaactaag 134824 Score = 1003 bits (506), Expect = 0.0 Identities = 653/695 (93%), Gaps = 14/695 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105557 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 105616 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 105617 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 105675 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105676 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 105735 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105736 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 105795 Query: 242 cgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||||||| Sbjct: 105796 cgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtccagtag 105855 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 105856 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 105915 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105916 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 105975 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 105976 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 106034 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 106035 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 106090 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 |||||||||||| |||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 106091 gagccggcgactaataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 106144 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 106145 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 106203 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 106204 atccatgaccaggatgaagcttgggtgaaactaag 106238
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 1001 bits (505), Expect = 0.0 Identities = 653/695 (93%), Gaps = 13/695 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 53 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 112 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||| Sbjct: 113 ccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaaccta 171 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 172 acgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 231 Query: 182 -ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaa 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 232 aggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaa 291 Query: 241 gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 300 |||| |||||||||||||||||||| ||||||| |||||||||||||| |||||||||| Sbjct: 292 gcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggctagagtccagtag 351 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 352 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 411 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 412 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtag 471 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 472 taccgtgagggaagggtgaaaagaacccccaccggggagtgaaatagaacatgaaaccg- 530 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | | | |||||||||||||||||||||||||| Sbjct: 531 --taagctcccaagcagtgggaggagcctg-gggctctgaccgcgtgcctgttgaagaat 587 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 588 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 641 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 642 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 700 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 701 atccatgaccaggatgaagcttgggtgaaactaag 735
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 999 bits (504), Expect = 0.0 Identities = 651/694 (93%), Gaps = 12/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 106058 gggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccggagattc 106117 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 106118 ccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 106176 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106177 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 106236 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106237 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 106296 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||| || ||||| |||||||||||||| | ||||||||||| Sbjct: 106297 cgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagc 106356 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106357 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 106416 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106417 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagt 106476 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 106477 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 106534 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||| ||||||||||||||| | | | | ||||||||||||||||||||||||||| Sbjct: 106535 -taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatg 106592 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 106593 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 106646 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| || |||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 106647 gaaagcgagtcttcatggggcaattgtcactgcttatggacccgaa-cctgggtgatcta 106705 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 106706 tccatgaccaggatgaagcttgggtgaaactaag 106739 Score = 950 bits (479), Expect = 0.0 Identities = 650/697 (93%), Gaps = 15/697 (2%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 135851 gggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccggagattc 135792 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 135791 ccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 135733 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135732 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 135673 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc-aatacaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135672 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaatacaa 135613 Query: 241 gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 300 |||| ||||||||||||||||| || ||||| |||||||||||||| | |||||||||| Sbjct: 135612 gcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccagtag 135553 Query: 301 ccgaaagcatcactagcttatg-ctctgacccgagtagcatggggcacgtggaatcccgt 359 |||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||| Sbjct: 135552 ccgaaagcatcactagcttacgcccctgacccgagtagcatggggcacgtggaatcccgt 135493 Query: 360 gtgaatcag-caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 418 ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 135492 gtgaatcagccaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagt 135433 Query: 419 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 478 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 135432 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 135373 Query: 479 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 538 | | |||| ||||||||||||||| | | | | |||||||||||||||||||||||| Sbjct: 135372 g---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaaga 135317 Query: 539 atgagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgt 598 ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 135316 atgagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgt 135263 Query: 599 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgat 658 |||||||||||||||| || |||| |||||||||||||||||||||||| |||||||||| Sbjct: 135262 agcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaa-cctgggtgat 135204 Query: 659 ctatccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||| |||||||||| Sbjct: 135203 ctatccatgaccaggatgaagcttgggtgaaactaag 135167
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 999 bits (504), Expect = 0.0 Identities = 651/694 (93%), Gaps = 12/694 (1%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 136127 gggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccggagattc 136068 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 136067 ccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 136009 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136008 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 135949 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135948 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 135889 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||| || ||||| |||||||||||||| | ||||||||||| Sbjct: 135888 cgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagc 135829 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135828 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 135769 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135768 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagt 135709 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 135708 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 135651 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||| ||||||||||||||| | | | | ||||||||||||||||||||||||||| Sbjct: 135650 -taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatg 135593 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 135592 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 135539 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| || |||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 135538 gaaagcgagtcttcatggggcaattgtcactgcttatggacccgaa-cctgggtgatcta 135480 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 135479 tccatgaccaggatgaagcttgggtgaaactaag 135446 Score = 999 bits (504), Expect = 0.0 Identities = 651/694 (93%), Gaps = 12/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 106280 gggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccggagattc 106339 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 106340 ccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 106398 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106399 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 106458 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106459 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 106518 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||| || ||||| |||||||||||||| | ||||||||||| Sbjct: 106519 cgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccagtagc 106578 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106579 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 106638 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106639 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagt 106698 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 106699 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 106756 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||| ||||||||||||||| | | | | ||||||||||||||||||||||||||| Sbjct: 106757 -taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaagaatg 106814 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 106815 agccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtagc 106868 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| || |||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 106869 gaaagcgagtcttcatggggcaattgtcactgcttatggacccgaa-cctgggtgatcta 106927 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 106928 tccatgaccaggatgaagcttgggtgaaactaag 106961
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 991 bits (500), Expect = 0.0 Identities = 641/682 (93%), Gaps = 12/682 (1%) Strand = Plus / Minus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 73 ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 131726 cgacgaaatgcttcggggagttgaaaataagcagagatccggagattcccgaataggtca 131667 Query: 74 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 133 |||||| |||| | ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 131666 acctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 131608 Query: 134 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131607 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 131548 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131547 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 131488 Query: 254 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 313 ||||||| | || |||||| | ||||||||||| ||||||||||||||||||||||||| Sbjct: 131487 aggcgaatcagtggagtgcggaaccctagatggtgaaagtccagtagccgaaagcatcac 131428 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131427 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 131368 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131367 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 131308 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| ||| Sbjct: 131307 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaa 131251 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 131250 gcagtgggagggggaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactc 131192 Query: 554 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 613 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 131191 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 131138 Query: 614 taatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgaccagg 673 | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 131137 tcatagggcaattgtcactgcttatggacccgaa-cctgggtgatctatccatgaccagg 131079 Query: 674 atgaagcttggatgaaactaag 695 ||||||||||| |||||||||| Sbjct: 131078 atgaagcttgggtgaaactaag 131057 Score = 991 bits (500), Expect = 0.0 Identities = 641/682 (93%), Gaps = 12/682 (1%) Strand = Plus / Plus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 73 ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 101719 cgacgaaatgcttcggggagttgaaaataagcagagatccggagattcccgaataggtca 101778 Query: 74 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 133 |||||| |||| | ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 101779 acctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 101837 Query: 134 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101838 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 101897 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 101898 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 101957 Query: 254 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 313 ||||||| | || |||||| | ||||||||||| ||||||||||||||||||||||||| Sbjct: 101958 aggcgaatcagtggagtgcggaaccctagatggtgaaagtccagtagccgaaagcatcac 102017 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102018 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 102077 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102078 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 102137 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| ||| Sbjct: 102138 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaa 102194 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 102195 gcagtgggagggggaccaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactc 102253 Query: 554 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 613 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 102254 ataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 102307 Query: 614 taatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgaccagg 673 | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 102308 tcatagggcaattgtcactgcttatggacccgaa-cctgggtgatctatccatgaccagg 102366 Query: 674 atgaagcttggatgaaactaag 695 ||||||||||| |||||||||| Sbjct: 102367 atgaagcttgggtgaaactaag 102388
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 987 bits (498), Expect = 0.0 Identities = 651/695 (93%), Gaps = 14/695 (2%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 139451 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 139392 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||| Sbjct: 139391 ccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagacaacctg 139333 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 139332 gcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagc 139273 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 139272 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaag 139213 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| |||||||||||||||||||| ||||||| |||||||||||| | ||||||||||| Sbjct: 139212 cgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccagtagc 139153 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 139152 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 139093 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139092 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 139033 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| |||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 139032 accgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg-- 138975 Query: 482 ctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 138974 -taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaagaat 138918 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 138917 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 138864 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 138863 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 138805 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 138804 atccatgaccaggatgaagcttgggtgaaactaag 138770 Score = 987 bits (498), Expect = 0.0 Identities = 651/695 (93%), Gaps = 14/695 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 109646 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 109705 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||| Sbjct: 109706 ccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagacaacctg 109764 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 109765 gcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagc 109824 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 109825 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaag 109884 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| |||||||||||||||||||| ||||||| |||||||||||| | ||||||||||| Sbjct: 109885 cgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccagtagc 109944 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 109945 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 110004 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110005 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 110064 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| |||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 110065 accgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg-- 110122 Query: 482 ctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 110123 -taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaagaat 110179 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 110180 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 110233 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 110234 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 110292 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 110293 atccatgaccaggatgaagcttgggtgaaactaag 110327
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 987 bits (498), Expect = 0.0 Identities = 652/695 (93%), Gaps = 15/695 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 87 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 88 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 146 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 206 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 266 Query: 242 cgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | ||| ||| |||||| | ||||| |||||||||||| Sbjct: 267 cgtcgtgctgctaggcgaagcagcctgaatgctgcaccc-atatggcgaaagtccagtag 325 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 326 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 385 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 445 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 446 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 504 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 505 --taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 560 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 561 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 614 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 615 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 673 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 674 atccatgaccaggatgaagcttgggtgaaactaag 708
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 983 bits (496), Expect = 0.0 Identities = 652/697 (93%), Gaps = 14/697 (2%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 139660 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 139601 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 139600 ccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 139542 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139541 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 139482 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139481 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 139422 Query: 242 cgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| || || ||| ||||||||||||| | |||||||||| Sbjct: 139421 cgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgagagtccagtag 139362 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 139361 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 139302 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 139301 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccatagcgaagtag 139242 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 139241 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 139183 Query: 481 gctgagctcccaagcagtgggagggga--aagtgatctctgaccgcgtgcctgttgaaga 538 | |||||||||||||||||||| || | | |||||||||||||||||||||||| Sbjct: 139182 --taagctcccaagcagtgggaggagactactaggactctgaccgcgtgcctgttgaaga 139125 Query: 539 atgagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgt 598 ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 139124 atgagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgt 139071 Query: 599 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgat 658 |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 139070 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgat 139012 Query: 659 ctatccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||| |||||||||| Sbjct: 139011 ctatccatgaccaggatgaagcttgggtgaaactaag 138975 Score = 983 bits (496), Expect = 0.0 Identities = 652/697 (93%), Gaps = 14/697 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 109639 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 109698 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 109699 ccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 109757 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109758 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 109817 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109818 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 109877 Query: 242 cgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| || || ||| ||||||||||||| | |||||||||| Sbjct: 109878 cgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgagagtccagtag 109937 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 109938 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 109997 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 109998 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccatagcgaagtag 110057 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 110058 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 110116 Query: 481 gctgagctcccaagcagtgggagggga--aagtgatctctgaccgcgtgcctgttgaaga 538 | |||||||||||||||||||| || | | |||||||||||||||||||||||| Sbjct: 110117 --taagctcccaagcagtgggaggagactactaggactctgaccgcgtgcctgttgaaga 110174 Query: 539 atgagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgt 598 ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 110175 atgagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgt 110228 Query: 599 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgat 658 |||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 110229 agcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgat 110287 Query: 659 ctatccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||| |||||||||| Sbjct: 110288 ctatccatgaccaggatgaagcttgggtgaaactaag 110324
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 971 bits (490), Expect = 0.0 Identities = 649/695 (93%), Gaps = 14/695 (2%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 142826 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgcagatccggagattc 142767 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 142766 ccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 142708 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142707 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 142648 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 142647 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagtcatacaag 142588 Query: 242 cgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | || ||||| ||||||||||||| | |||||||||| Sbjct: 142587 cgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagagtccagtag 142528 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 142527 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 142468 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 142467 tgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtag 142408 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 142407 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 142349 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | ||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 142348 --taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 142293 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 142292 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 142239 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 142238 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 142180 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||||||||||||||| Sbjct: 142179 atccatgaccaggatgaagcttggatgaaactaag 142145 Score = 971 bits (490), Expect = 0.0 Identities = 649/695 (93%), Gaps = 14/695 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 110502 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgcagatccggagattc 110561 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 110562 ccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 110620 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110621 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 110680 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 110681 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagtcatacaag 110740 Query: 242 cgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaagtccagtag 300 ||| ||||||||||||||||| | || ||||| ||||||||||||| | |||||||||| Sbjct: 110741 cgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagagtccagtag 110800 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 110801 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 110860 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 110861 tgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtag 110920 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 110921 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 110979 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | ||||||||||||||||||| | || | |||||||||||||||||||||||||| Sbjct: 110980 --taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaat 111035 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 111036 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 111089 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 111090 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 111148 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||||||||||||||| Sbjct: 111149 atccatgaccaggatgaagcttggatgaaactaag 111183
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 955 bits (482), Expect = 0.0 Identities = 640/683 (93%), Gaps = 16/683 (2%) Strand = Plus / Plus Query: 16 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaac 75 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 1833 acgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggcaac 1892 Query: 76 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 135 |||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 1893 ctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaccat 1951 Query: 136 cttagtagccagaggaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatg 194 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1952 cttagtagccagaggaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatg 2011 Query: 195 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagc-gttgtgctgct 253 |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 2012 ggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgct 2071 Query: 254 aggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 312 ||||||||| | || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 2072 aggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 2131 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2132 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 2191 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2192 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 2251 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||| Sbjct: 2252 agggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctccca 2308 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 2309 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 2366 Query: 553 cataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 612 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2367 cataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtc 2420 Query: 613 ttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgaccag 672 || ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 2421 ttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatctatccatgaccag 2479 Query: 673 gatgaagcttggatgaaactaag 695 |||||||||||| |||||||||| Sbjct: 2480 gatgaagcttgggtgaaactaag 2502
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 955 bits (482), Expect = 0.0 Identities = 485/486 (99%) Strand = Plus / Plus Query: 82 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 142 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 202 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 262 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 321 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 322 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 382 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 442 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 502 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 480 Query: 562 tggctt 567 |||||| Sbjct: 481 tggctt 486
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 952 bits (480), Expect = 0.0 Identities = 644/694 (92%), Gaps = 11/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 54 gggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggagattc 113 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||| ||| |||||||| |||||| |||||||| ||| ||||||||||||||||||| Sbjct: 114 ccgaatgggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacctg 172 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 173 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 232 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 233 ggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataag 292 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||| ||||||||||||||||||||| |||||||| |||||| | ||||||||||| Sbjct: 293 tgttgtgttgctaggcgaagcggttgagtcccgcaccccagatggtgagagtccagtagc 352 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 353 cgaaagcatcactagcttacgctctaacccgagtagcatggggcacgtggaatcccgtgt 412 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 472 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 473 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 530 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 531 -taagctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatg 589 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 ||||||||||| ||||| |||||| |||||||| || |||||||||||||||||| Sbjct: 590 agccggcgacttataggtagtggc-ctggttaag-----gggacccaccggagccgtagc 643 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| | |||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 644 gaaagcgagtcttcctggggcaattgtcactacttatggacccgaa-cctgggtgatcta 702 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||| || |||||||||| Sbjct: 703 tccatgaccaggatgaagctcgggtgaaactaag 736
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 950 bits (479), Expect = 0.0 Identities = 637/683 (93%), Gaps = 15/683 (2%) Strand = Plus / Plus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 73 |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| || Sbjct: 561 cgacgaaatgcttcggggagttgaaaataagccgagatccggagattcccgaatagggca 620 Query: 74 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 133 |||||| |||| | ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 621 acctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 679 Query: 134 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 680 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 739 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 740 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 799 Query: 254 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 313 ||||||| | || |||||| | ||||||||||| ||||||||||||||||||||||||| Sbjct: 800 aggcgaatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcac 859 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 860 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 919 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagta-ccgtgaggga 432 |||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||| Sbjct: 920 accaccttgcaaggctaaatactcctgggtgaccgatagccaaatagtacccgtgaggga 979 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 ||||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| || Sbjct: 980 aaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctca 1036 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| || || |||||||||||||||||||||||||||||||||||||| Sbjct: 1037 agcagtgggaggagacag---gctctgaccgcgtgcctgttgaagaatgagccggcgact 1093 Query: 553 cataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 612 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1094 cataggcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtc 1147 Query: 613 ttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgaccag 672 || ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1148 ttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatctatccatgaccag 1206 Query: 673 gatgaagcttggatgaaactaag 695 |||||||||||| |||||||||| Sbjct: 1207 gatgaagcttgggtgaaactaag 1229
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 946 bits (477), Expect = 0.0 Identities = 644/694 (92%), Gaps = 13/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 4284 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattc 4343 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| |||||||| || ||||||||||||||||||||| Sbjct: 4344 ccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctg 4402 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4403 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 4462 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4463 ggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 4522 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||| ||||||||||||| | || || ||||||||||||| ||||||||||||| Sbjct: 4523 cgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtccagtagc 4582 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4583 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 4642 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4643 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagt 4702 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 4703 accgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaaaccg-- 4760 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| | | | ||||||||||||||||||||||||||| Sbjct: 4761 -taagctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatg 4817 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 4818 agccggcgactcataggcagtggc-ttggttaag-----ggaaaccaccggagccgtagc 4871 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 4872 gaaagcgagtcttcatagggctattgtcactgcttatggacccgaa-cctgggtgatcta 4930 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||| | |||||||||| Sbjct: 4931 tccatgaccaggatgaagcttaggtgaaactaag 4964
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 946 bits (477), Expect = 0.0 Identities = 644/694 (92%), Gaps = 13/694 (1%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 23641 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattc 23582 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| |||||||| || ||||||||||||||||||||| Sbjct: 23581 ccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctg 23523 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23522 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 23463 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23462 ggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 23403 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||| ||||||||||||| | || || ||||||||||||| ||||||||||||| Sbjct: 23402 cgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtccagtagc 23343 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23342 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 23283 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 23282 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagt 23223 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 23222 accgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaaaccg-- 23165 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| | | | ||||||||||||||||||||||||||| Sbjct: 23164 -taagctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatg 23108 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 23107 agccggcgactcataggcagtggc-ttggttaag-----ggaaaccaccggagccgtagc 23054 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 23053 gaaagcgagtcttcatagggctattgtcactgcttatggacccgaa-cctgggtgatcta 22995 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||| | |||||||||| Sbjct: 22994 tccatgaccaggatgaagcttaggtgaaactaag 22961
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 942 bits (475), Expect = 0.0 Identities = 645/696 (92%), Gaps = 13/696 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 86315 gggcgtggtaagcgacgaaatgcttcggggagttgaaaatgagcatagatccggagattc 86374 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||| ||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 86375 ccgaataggttaacccttttaactgc-tgctgaatccatgggcaggcaagagacaacctg 86433 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 86434 gcgaactgaaacatcttagtagccagaggaatagaaagcaaaagcgattcccgtagtagt 86493 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc--aataca 239 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 86494 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcccaatata 86553 Query: 240 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 299 ||| |||||||||||||||||||||||||| | ||||||||||||| | ||||||||| Sbjct: 86554 agctctgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgagagtccagta 86613 Query: 300 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 359 ||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 86614 gccgaaagcatcattggcttacgctctaacccgagtagcatggggcacgtggaatcccgt 86673 Query: 360 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86674 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 86733 Query: 420 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 479 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 86734 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 86793 Query: 480 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 539 | |||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 86794 ---taagctcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaa 86850 Query: 540 tgagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgta 599 ||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 86851 tgagccggcgacttataggcagtggc-ttggttaag-----ggaacccaccggagccgta 86904 Query: 600 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatc 659 |||| |||||||||| || |||| |||||||||||||||||||||||| ||||||||||| Sbjct: 86905 gcgagagcgagtcttcatggggcaattgtcactgcttatggacccgaa-cctgggtgatc 86963 Query: 660 tatccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||||| |||||||||| Sbjct: 86964 tatccatgaccaggatgaagcttgggtgaaactaag 86999
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 942 bits (475), Expect = 0.0 Identities = 645/696 (92%), Gaps = 13/696 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 88401 gggcgtggtaagcgacgaaatgcttcggggagttgaaaattagcatagatccggagattc 88460 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| ||||| ||||||||||||| ||||||||||||||||||| Sbjct: 88461 ccgaataggttaacctttttcactgc-tgctgaatccatgggcaggcaagagacaacctg 88519 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 88520 gtgaactgaaacatcttagtagccagaggaatagaaagcaaaagcgattcccgtagtagc 88579 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca--ataca 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 88580 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcacaatata 88639 Query: 240 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 299 ||| |||||||||||||||||||||||||| | ||||||||||||| | ||||||||| Sbjct: 88640 agctctgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgagagtccagta 88699 Query: 300 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 359 ||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 88700 gccgaaagcatcattggcttacgctctaacccgagtagcatggggcacgtggaatcccgt 88759 Query: 360 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88760 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 88819 Query: 420 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 479 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 88820 gtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 88879 Query: 480 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 539 | |||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 88880 ---taagctcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaa 88936 Query: 540 tgagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgta 599 ||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 88937 tgagccggcgacttataggcagtggc-ttggttaag-----ggaacccaccggagccgta 88990 Query: 600 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatc 659 |||| |||||||||| || |||| |||||||||||||||||||||||| ||||||||||| Sbjct: 88991 gcgagagcgagtcttcatggggcaattgtcactgcttatggacccgaa-cctgggtgatc 89049 Query: 660 tatccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||||| |||||||||| Sbjct: 89050 tatccatgaccaggatgaagcttgggtgaaactaag 89085
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 938 bits (473), Expect = 0.0 Identities = 644/694 (92%), Gaps = 14/694 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 4553 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattc 4612 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| |||||||| || ||||||||||||||||||||| Sbjct: 4613 ccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctg 4671 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4672 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 4731 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4732 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 4791 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||| || || || ||||||||||||| ||||||||||||| Sbjct: 4792 cgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtccagtagc 4851 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 4852 cgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatcccgtgt 4911 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4912 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagt 4971 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||| | ||| ||||||||||||| |||||||| Sbjct: 4972 accgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaaaccg-- 5029 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | ||||||||| |||||||||| | | | ||||||||||||||||||||||||||| Sbjct: 5030 -taagctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatg 5085 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 5086 agccggcgactcataggcagtggc-ttggttaag-----ggaaaccaccggagccgtagc 5139 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 5140 gaaagcgagtcttcatagggctattgtcactgcttatggacccgaa-cctgggtgatcta 5198 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||| || | |||||||||| Sbjct: 5199 tccatgaccaggatgaagtttaggtgaaactaag 5232
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 938 bits (473), Expect = 0.0 Identities = 648/696 (93%), Gaps = 19/696 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 gggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 212 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct: 213 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctg 271 Query: 122 gcgaactgaaacatcttagt-agccagaggaaaagaaagcaaaagcgattcccgtagtag 180 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 272 gcgaactgaaacatcttagtgagccagaggaaaagaaagcaaaagcgattcccgtagtag 331 Query: 181 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaa 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 332 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggg-ttgtgggagagcaatacaa 390 Query: 241 gcgttgtgctgctaggcgaag-cggttgagtgccgcaccctagatggctaaagtccagta 299 |||| |||||||||||||||| || || ||| |||||||||||||| ||||||||||| Sbjct: 391 gcgtcgtgctgctaggcgaagacgcccgaatgctgcaccctagatggcgaaagtccagta 450 Query: 300 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 510 Query: 360 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 419 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 gtgaatcgacaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 570 Query: 420 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 479 |||||||||||||| ||||||||||| ||||| ||| ||||||||||||| |||||||| Sbjct: 571 gtaccgtgagggaagggtgaaaagaa-ccccatcggggagtgaaatagaacatgaaaccg 629 Query: 480 tgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaa 539 | |||||||||||||||||||| | | ||||||||||||||||||||||||| Sbjct: 630 ---taagctcccaagcagtgggaggcca----gggctctgaccgcgtgcctgttgaagaa 682 Query: 540 tgagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgta 599 |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 683 tgagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgta 736 Query: 600 gcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatc 659 ||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 737 gcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatc 795 Query: 660 tatccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||||| |||||||||| Sbjct: 796 tatccatgaccaggatgaagcttgggtgaaactaag 831
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 938 bits (473), Expect = 0.0 Identities = 644/694 (92%), Gaps = 14/694 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 4553 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattc 4612 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| |||||||| || ||||||||||||||||||||| Sbjct: 4613 ccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctg 4671 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4672 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 4731 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4732 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 4791 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||| || || || ||||||||||||| ||||||||||||| Sbjct: 4792 cgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtccagtagc 4851 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 4852 cgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatcccgtgt 4911 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4912 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtagt 4971 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||| | ||| ||||||||||||| |||||||| Sbjct: 4972 accgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaaaccg-- 5029 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | ||||||||| |||||||||| | | | ||||||||||||||||||||||||||| Sbjct: 5030 -taagctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaagaatg 5085 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 5086 agccggcgactcataggcagtggc-ttggttaag-----ggaaaccaccggagccgtagc 5139 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 5140 gaaagcgagtcttcatagggctattgtcactgcttatggacccgaa-cctgggtgatcta 5198 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||| || | |||||||||| Sbjct: 5199 tccatgaccaggatgaagtttaggtgaaactaag 5232
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 932 bits (470), Expect = 0.0 Identities = 633/682 (92%), Gaps = 14/682 (2%) Strand = Plus / Plus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 73 |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| || Sbjct: 73 cgacgaaatgcttcggggagttgaaaataagccgagatccggagattcccgaatagggca 132 Query: 74 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 133 |||||| |||| | ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 133 acctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 191 Query: 134 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 192 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 251 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 252 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 311 Query: 254 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 313 ||||||| | || |||||| | ||||||||||| ||||||||||||||||||||||||| Sbjct: 312 aggcgaatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcac 371 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 431 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 432 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaa 491 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||| ||| |||||||| | ||||| ||| Sbjct: 492 gggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg---taagctctcaa 548 Query: 494 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 553 ||||||||||| || || |||||| ||||||||||||||| |||||||||||||||| Sbjct: 549 gcagtgggaggagacag---gctctgaacgcgtgcctgttgaaaaatgagccggcgactc 605 Query: 554 ataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtct 613 ||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 606 atacgcagtggc-ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtct 659 Query: 614 taatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgaccagg 673 | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 660 tcatagggcaattgtcactgcttatggacccgaa-cctgggtgatctatccatgaccagg 718 Query: 674 atgaagcttggatgaaactaag 695 ||||||||||| |||||||||| Sbjct: 719 atgaagcttgggtgaaactaag 740
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 922 bits (465), Expect = 0.0 Identities = 647/698 (92%), Gaps = 16/698 (2%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 131818 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggattc 131759 Query: 62 ccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacct 120 || | |||||||||||||| |||||| ||||||||||| | |||||||||||||||||| Sbjct: 131758 ccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaacct 131700 Query: 121 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 180 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131699 ggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 131640 Query: 181 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaa 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 131639 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaa 131580 Query: 241 gcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtccagt 298 | || ||||||||||||||||| | ||| ||| |||||||||||||| | |||||||| Sbjct: 131579 gtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtccagt 131520 Query: 299 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 358 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 131519 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 131460 Query: 359 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 131459 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagt 131400 Query: 419 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 478 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 131399 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 131340 Query: 479 gtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaag 537 | | |||||||||||||||||||| || | || ||||||||||||||||||||||| Sbjct: 131339 g---taagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaag 131284 Query: 538 aatgagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccg 597 |||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| Sbjct: 131283 aatgagccggcgactcataggcagtggc-ttggttaag-----ggaaaccaccggagccg 131230 Query: 598 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtga 657 ||||||||||||||||| | ||||| |||||||||||||||||||||||| ||||||||| Sbjct: 131229 tagcgaaagcgagtcttcacagggcaattgtcactgcttatggacccgaa-cctgggtga 131171 Query: 658 tctatccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||||||| |||||||||| Sbjct: 131170 tctatccatgaccaggatgaagcttgggtgaaactaag 131133 Score = 922 bits (465), Expect = 0.0 Identities = 647/698 (92%), Gaps = 16/698 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 103576 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggattc 103635 Query: 62 ccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacct 120 || | |||||||||||||| |||||| ||||||||||| | |||||||||||||||||| Sbjct: 103636 ccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaacct 103694 Query: 121 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 180 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103695 ggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 103754 Query: 181 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaa 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 103755 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaa 103814 Query: 241 gcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtccagt 298 | || ||||||||||||||||| | ||| ||| |||||||||||||| | |||||||| Sbjct: 103815 gtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtccagt 103874 Query: 299 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 358 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 103875 agccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccg 103934 Query: 359 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 103935 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagt 103994 Query: 419 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 478 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 103995 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 104054 Query: 479 gtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaag 537 | | |||||||||||||||||||| || | || ||||||||||||||||||||||| Sbjct: 104055 g---taagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaag 104110 Query: 538 aatgagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccg 597 |||||||||||||||||||||||||||| ||||||||| |||| |||||||||||| Sbjct: 104111 aatgagccggcgactcataggcagtggc-ttggttaag-----ggaaaccaccggagccg 104164 Query: 598 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtga 657 ||||||||||||||||| | ||||| |||||||||||||||||||||||| ||||||||| Sbjct: 104165 tagcgaaagcgagtcttcacagggcaattgtcactgcttatggacccgaa-cctgggtga 104223 Query: 658 tctatccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||||||| |||||||||| Sbjct: 104224 tctatccatgaccaggatgaagcttgggtgaaactaag 104261
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 908 bits (458), Expect = 0.0 Identities = 632/683 (92%), Gaps = 14/683 (2%) Strand = Plus / Minus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 73 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 52621 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 52562 Query: 74 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 133 ||||||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 52561 accttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaac 52503 Query: 134 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 52502 atcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 52443 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 52442 gggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgct 52383 Query: 254 aggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 312 ||||||| | | |||| ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 52382 aggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 52323 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 52322 ttagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaag 52263 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 52262 gaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgaggga 52203 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| |||| ||||||||||||| |||||||| | |||||||| Sbjct: 52202 agggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctccca 52146 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 52145 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 52088 Query: 553 cataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 612 ||||||||| ||| ||||||||| |||||||||||||||| |||||||||||||| Sbjct: 52087 cataggcagcggc-ttggttaag-----ggaacccaccggagccatagcgaaagcgagta 52034 Query: 613 ttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgaccag 672 || ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 52033 ttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatctatccatgaccag 51975 Query: 673 gatgaagcttggatgaaactaag 695 |||||||||||| |||||||||| Sbjct: 51974 gatgaagcttgggtgaaactaag 51952 Score = 908 bits (458), Expect = 0.0 Identities = 632/683 (92%), Gaps = 14/683 (2%) Strand = Plus / Plus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 73 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 37207 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 37266 Query: 74 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 133 ||||||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 37267 accttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaac 37325 Query: 134 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 37326 atcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 37385 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 37386 gggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgct 37445 Query: 254 aggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 312 ||||||| | | |||| ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 37446 aggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 37505 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 37506 ttagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaag 37565 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 37566 gaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgaggga 37625 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| |||| ||||||||||||| |||||||| | |||||||| Sbjct: 37626 agggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctccca 37682 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 37683 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 37740 Query: 553 cataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 612 ||||||||| ||| ||||||||| |||||||||||||||| |||||||||||||| Sbjct: 37741 cataggcagcggc-ttggttaag-----ggaacccaccggagccatagcgaaagcgagta 37794 Query: 613 ttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgaccag 672 || ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 37795 ttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatctatccatgaccag 37853 Query: 673 gatgaagcttggatgaaactaag 695 |||||||||||| |||||||||| Sbjct: 37854 gatgaagcttgggtgaaactaag 37876
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 908 bits (458), Expect = 0.0 Identities = 632/683 (92%), Gaps = 14/683 (2%) Strand = Plus / Plus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 73 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 4135 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaatagggca 4194 Query: 74 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 133 ||||||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||||| Sbjct: 4195 accttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaaac 4253 Query: 134 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 4254 atcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaat 4313 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 4314 gggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgct 4373 Query: 254 aggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 312 ||||||| | | |||| ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 4374 aggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 4433 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4434 ttagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaag 4493 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 4494 gaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgaggga 4553 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||||||||| |||| ||||||||||||| |||||||| | |||||||| Sbjct: 4554 agggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctccca 4610 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 4611 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 4668 Query: 553 cataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 612 ||||||||| ||| ||||||||| |||||||||||||||| |||||||||||||| Sbjct: 4669 cataggcagcggc-ttggttaag-----ggaacccaccggagccatagcgaaagcgagta 4722 Query: 613 ttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgaccag 672 || ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4723 ttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatctatccatgaccag 4781 Query: 673 gatgaagcttggatgaaactaag 695 |||||||||||| |||||||||| Sbjct: 4782 gatgaagcttgggtgaaactaag 4804
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 906 bits (457), Expect = 0.0 Identities = 463/465 (99%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 111 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 112 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 171 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 172 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 231 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 232 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 291 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 351 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 352 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 411 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 412 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 471 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 466 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 472 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 516
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 896 bits (452), Expect = 0.0 Identities = 511/529 (96%), Gaps = 15/529 (2%) Strand = Plus / Minus Query: 172 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 232 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 292 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 351 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 352 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 406 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 407 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 467 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 526 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 527 gcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaacc 586 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaatggaacc 75068 Query: 587 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 646 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 75067 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 75008 Query: 647 accctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75007 a-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 74960 Score = 339 bits (171), Expect = 7e-90 Identities = 174/175 (99%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75659 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 75600 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 75599 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 75540 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 176 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75539 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 3e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 103 gcaggcaagagacaacctggcgaactgaaacatcttagta 142 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 896 bits (452), Expect = 0.0 Identities = 511/529 (96%), Gaps = 15/529 (2%) Strand = Plus / Plus Query: 172 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 232 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 292 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 351 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 352 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 406 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 407 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 467 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 526 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 527 gcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaacc 586 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaatggaacc 382470 Query: 587 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 646 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 382471 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 382530 Query: 647 accctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382531 a-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 382578 Score = 339 bits (171), Expect = 7e-90 Identities = 174/175 (99%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381879 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 381938 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 381939 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 381998 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 176 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381999 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 3e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 103 gcaggcaagagacaacctggcgaactgaaacatcttagta 142 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 3e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 103 gcaggcaagagacaacctggcgaactgaaacatcttagta 142 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 896 bits (452), Expect = 0.0 Identities = 511/529 (96%), Gaps = 15/529 (2%) Strand = Plus / Minus Query: 172 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 232 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 292 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 351 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 352 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 406 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 407 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 467 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 526 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 527 gcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaacc 586 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaatggaacc 113159 Query: 587 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 646 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 113158 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 113099 Query: 647 accctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113098 a-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 113051 Score = 339 bits (171), Expect = 7e-90 Identities = 174/175 (99%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113750 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 113691 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 113690 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 113631 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 176 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113630 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 3e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 103 gcaggcaagagacaacctggcgaactgaaacatcttagta 142 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 896 bits (452), Expect = 0.0 Identities = 511/529 (96%), Gaps = 15/529 (2%) Strand = Plus / Minus Query: 172 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 232 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 292 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 351 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 352 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 406 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 407 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 467 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 526 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 527 gcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaacc 586 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaatggaacc 367841 Query: 587 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 646 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 367840 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 367781 Query: 647 accctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367780 a-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 367733 Score = 896 bits (452), Expect = 0.0 Identities = 511/529 (96%), Gaps = 15/529 (2%) Strand = Plus / Minus Query: 172 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 232 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 292 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 351 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 352 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 406 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 407 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 467 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 526 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 527 gcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaacc 586 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaatggaacc 184446 Query: 587 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccga 646 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 184445 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccga 184386 Query: 647 accctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184385 a-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 184338 Score = 339 bits (171), Expect = 7e-90 Identities = 174/175 (99%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368432 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 368373 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 368372 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 368313 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 176 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368312 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 368258 Score = 339 bits (171), Expect = 7e-90 Identities = 174/175 (99%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185037 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 184978 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 184977 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 184918 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 176 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184917 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 3e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 103 gcaggcaagagacaacctggcgaactgaaacatcttagta 142 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 896 bits (452), Expect = 0.0 Identities = 638/694 (91%), Gaps = 12/694 (1%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 116156 gggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatagatccggagattc 116097 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| ||||||| ||||||| |||||||| ||| |||| |||||||||||||| Sbjct: 116096 ccgaataggttaacctttgaaactgc-tgctgaattcataggcagacaagagacaacctg 116038 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 116037 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattctcgtagtagc 115978 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||| |||||||||||||||||||||| ||||||| |||| | | ||| Sbjct: 115977 ggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggagctaaataag 115919 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||| ||||||||||||| ||||||| | ||||||||||||| ||||||||||| | Sbjct: 115918 tgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagtccagtaac 115859 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 115858 cgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaatcccgtgt 115799 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 115798 gaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagt 115739 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 115738 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 115681 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 115680 -taagctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatg 115622 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 ||||||||||| |||||||||||| |||||||| ||| ||||||||||||||||| Sbjct: 115621 agccggcgacttataggcagtggc-ctggttaag-----ggagcccaccggagccgtagc 115568 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 115567 gaaagcgagtcttcttagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 115509 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 115508 tccatgaccaggatgaagcttgggtgaaactaag 115475 Score = 896 bits (452), Expect = 0.0 Identities = 638/694 (91%), Gaps = 12/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 85964 gggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatagatccggagattc 86023 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| ||||||| ||||||| |||||||| ||| |||| |||||||||||||| Sbjct: 86024 ccgaataggttaacctttgaaactgc-tgctgaattcataggcagacaagagacaacctg 86082 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 86083 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattctcgtagtagc 86142 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||| |||||||||||||||||||||| ||||||| |||| | | ||| Sbjct: 86143 ggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggagctaaataag 86201 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||| ||||||||||||| ||||||| | ||||||||||||| ||||||||||| | Sbjct: 86202 tgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagtccagtaac 86261 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 86262 cgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaatcccgtgt 86321 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 86322 gaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagt 86381 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 86382 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 86439 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 86440 -taagctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatg 86498 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 ||||||||||| |||||||||||| |||||||| ||| ||||||||||||||||| Sbjct: 86499 agccggcgacttataggcagtggc-ctggttaag-----ggagcccaccggagccgtagc 86552 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 86553 gaaagcgagtcttcttagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 86611 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 86612 tccatgaccaggatgaagcttgggtgaaactaag 86645
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 894 bits (451), Expect = 0.0 Identities = 641/700 (91%), Gaps = 17/700 (2%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 ||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 128393 gggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatccggagattc 128334 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||||| Sbjct: 128333 ccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacctg 128275 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 128274 gcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcccgtagtagc 128215 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc------aa 235 |||||||||| |||||| ||||||||||||||||||||||||||||| |||| || Sbjct: 128214 ggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagcgatacaaa 128155 Query: 236 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 295 ||||||| ||||||||||||||||||||||||||| |||||||||||||||| | ||||| Sbjct: 128154 tacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggcaagagtcc 128095 Query: 296 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 355 ||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||||| Sbjct: 128094 agtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcacgtggaatc 128035 Query: 356 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128034 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 127975 Query: 416 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 475 || ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 127974 agcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatagaacatgaa 127915 Query: 476 accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 535 |||| | |||||||||||||||||||| ||| ||||||||||||| |||||||||| Sbjct: 127914 accg---taagctcccaagcagtgggaggagaattggatctctgaccgcatgcctgttga 127858 Query: 536 agaatgagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagc 595 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 127857 ggaatgagccggcgactcataggcagtggc-ctggttaag-----ggaacccaccggagc 127804 Query: 596 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggt 655 ||||||||||||||||||| |||||| |||||||||||| ||||||||||| ||||||| Sbjct: 127803 cgtagcgaaagcgagtcttcctagggcaattgtcactgctcatggacccgaa-cctgggt 127745 Query: 656 gatctatccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||||||||| | |||||||| Sbjct: 127744 gatctatccatgaccaggatgaagcttgggtaaaactaag 127705 Score = 894 bits (451), Expect = 0.0 Identities = 641/700 (91%), Gaps = 17/700 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 ||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 95054 gggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatccggagattc 95113 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||||| Sbjct: 95114 ccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacctg 95172 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 95173 gcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcccgtagtagc 95232 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc------aa 235 |||||||||| |||||| ||||||||||||||||||||||||||||| |||| || Sbjct: 95233 ggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagcgatacaaa 95292 Query: 236 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 295 ||||||| ||||||||||||||||||||||||||| |||||||||||||||| | ||||| Sbjct: 95293 tacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggcaagagtcc 95352 Query: 296 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 355 ||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||||| Sbjct: 95353 agtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcacgtggaatc 95412 Query: 356 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95413 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 95472 Query: 416 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 475 || ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 95473 agcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatagaacatgaa 95532 Query: 476 accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 535 |||| | |||||||||||||||||||| ||| ||||||||||||| |||||||||| Sbjct: 95533 accg---taagctcccaagcagtgggaggagaattggatctctgaccgcatgcctgttga 95589 Query: 536 agaatgagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagc 595 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 95590 ggaatgagccggcgactcataggcagtggc-ctggttaag-----ggaacccaccggagc 95643 Query: 596 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggt 655 ||||||||||||||||||| |||||| |||||||||||| ||||||||||| ||||||| Sbjct: 95644 cgtagcgaaagcgagtcttcctagggcaattgtcactgctcatggacccgaa-cctgggt 95702 Query: 656 gatctatccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||||||||| | |||||||| Sbjct: 95703 gatctatccatgaccaggatgaagcttgggtaaaactaag 95742
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 888 bits (448), Expect = 0.0 Identities = 636/694 (91%), Gaps = 11/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 54 gggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatggatccggagattc 113 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| |||||| |||||||| ||| |||| |||||||||||||| Sbjct: 114 ccgaataggttaaccttttgaactgc-tgctgaattcataggcagacaagagacaacctg 172 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 173 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagc 232 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| | | Sbjct: 233 ggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggggagcaaagtagg 292 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||||||| |||||||||||| ||||| | | ||||| ||||||| | ||||||||||| Sbjct: 293 cgttgtgtcgctaggcgaagcagttgaatcctgcaccatagatggtgagagtccagtagc 352 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 353 cgaaagcatcactagtttatgctctaacccgagtagcatggggcacgtggaatcccgtgt 412 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 413 gaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagtagt 472 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 473 accgtgagggaaaggtgaaaagaacccccataggggagtgaaatagaacatgaaaccg-- 530 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 531 -taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatg 589 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 ||||||||||| ||||| |||||| |||||||| ||||||||||||||||||||| Sbjct: 590 agccggcgacttataggtagtggc-ctggttaag-----ggaacccaccggagccgtagc 643 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||| ||||||||| |||||||||||||| ||||||||||||| Sbjct: 644 gaaagcgagtcttcctagggcaattgtcactacttatggacccgaa-cctgggtgatcta 702 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 703 tccatgaccaggatgaagcttgggtgaaactaag 736
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 884 bits (446), Expect = 0.0 Identities = 644/695 (92%), Gaps = 25/695 (3%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 680 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 621 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||| ||| |||| |||||||||||||| |||||||||||||| || Sbjct: 620 ccgaataggtca--ctt---gactg-ctgctgaatccatg-gcaggcaagagaca--ct- 571 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaa-gcaaaagcgattcccgtagtag 180 |||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 570 gcga--tga-acatcttagtagccagaggaaaagaaaggcaaaagcgattcccgtagtag 514 Query: 181 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaa 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 513 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcgatacaa 454 Query: 241 gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 300 |||| |||||||||||||||||||| |||||| |||||||||||||| | |||||||||| Sbjct: 453 gcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtag 394 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 393 ccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 334 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 274 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 273 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 215 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| | | | |||||||||||||||||||||||||| Sbjct: 214 --taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaagaat 158 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 157 gagccggcgactcataggcagtggc-ttggttaag-----ggaacccaccggagccgtag 104 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 103 cgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatct 45 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 44 atccatgaccaggatgaagcttgggtgaaactaag 10
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 874 bits (441), Expect = 0.0 Identities = 636/695 (91%), Gaps = 12/695 (1%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| Sbjct: 146506 gggcgtagcaagcgacgaaatgcttcggggagctgaaaatgagcatggatccggagattc 146447 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| |||| | |||||||| ||| |||||| |||||||||||| Sbjct: 146446 ccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgagagacaacctg 146388 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 146387 gcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagtagc 146328 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 146327 ggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataag 146268 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||| |||||||||||||||| ||||||| | | ||||||||||| | ||||||||||| Sbjct: 146267 cgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagtccagtagc 146208 Query: 302 cgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 ||||||||||||| || |||||||| ||||||||||||||||||||| |||||||||| Sbjct: 146207 cgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcagaatcccgtg 146148 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 146147 tgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcaaagtag 146088 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 146087 taccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg- 146029 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | ||||||||||||||||||| ||| |||| |||||||||||||||||||||||| Sbjct: 146028 --taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttgaagaat 145971 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 |||||||||||| |||||||||||| |||||||| |||||||||||||||||||| Sbjct: 145970 gagccggcgacttataggcagtggc-ctggttaag-----ggaacccaccggagccgtag 145917 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 145916 cgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa-cctgggtgatct 145858 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 145857 atccatgaccaggatgaagcttgggtgaaactaag 145823 Score = 874 bits (441), Expect = 0.0 Identities = 636/695 (91%), Gaps = 12/695 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| Sbjct: 111956 gggcgtagcaagcgacgaaatgcttcggggagctgaaaatgagcatggatccggagattc 112015 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| |||| | |||||||| ||| |||||| |||||||||||| Sbjct: 112016 ccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgagagacaacctg 112074 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 112075 gcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagtagc 112134 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 112135 ggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataag 112194 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||| |||||||||||||||| ||||||| | | ||||||||||| | ||||||||||| Sbjct: 112195 cgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagtccagtagc 112254 Query: 302 cgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 ||||||||||||| || |||||||| ||||||||||||||||||||| |||||||||| Sbjct: 112255 cgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcagaatcccgtg 112314 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 112315 tgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcaaagtag 112374 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 112375 taccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg- 112433 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | ||||||||||||||||||| ||| |||| |||||||||||||||||||||||| Sbjct: 112434 --taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttgaagaat 112491 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 |||||||||||| |||||||||||| |||||||| |||||||||||||||||||| Sbjct: 112492 gagccggcgacttataggcagtggc-ctggttaag-----ggaacccaccggagccgtag 112545 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 112546 cgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa-cctgggtgatct 112604 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||| |||||||||| Sbjct: 112605 atccatgaccaggatgaagcttgggtgaaactaag 112639
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 874 bits (441), Expect = 0.0 Identities = 635/694 (91%), Gaps = 8/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 37 gggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatagatccggagattc 96 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| ||||||||||||||| |||||||||||| || |||||||||||||||| Sbjct: 97 ccgaataggttaaccttttaaactgc-tgctgaatccataggcgggcaagagacaacctg 155 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||| Sbjct: 156 gcgaactgaaacatcttagtagccggaggaagagaaagcaaaagcgattctcgtagtagc 215 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 ||||||||||| ||||||||||||||||||||||||||||||||||| |||| | | ||| Sbjct: 216 ggcgagcgaaacgggagcagcctaaaccgtgaaaacggggttgtgggggagctaaagaag 275 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 | |||| ||||||||||||| ||||||| | ||||||||||||| | ||||||||| | Sbjct: 276 cattgtattgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagtaac 335 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||| || ||||| ||||| ||||||||| |||||||||||||||||||||||| Sbjct: 336 cgaaagcattacaagcttgggctctaacccgagtaacatggggcacgtggaatcccgtgt 395 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 396 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 455 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 456 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 513 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||| ||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 514 -taagcttccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatg 572 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 ||||||||||| |||||||||||| |||||||||||| | | ||||||||||| |||| Sbjct: 573 agccggcgacttataggcagtggc-ctggttaagggaaag--aaccaccggagccatagc 629 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 630 gaaagcgagtcttcccagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 688 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 689 tccatgaccaggatgaagcttgggtgaaactaag 722
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 874 bits (441), Expect = 0.0 Identities = 636/695 (91%), Gaps = 12/695 (1%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118096 gggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggagattc 118037 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||||| Sbjct: 118036 ccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacctg 117978 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 117977 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagc 117918 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| Sbjct: 117917 ggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaataag 117858 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||||||||| Sbjct: 117857 tgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagtagc 117798 Query: 302 cgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 ||||||||| || | || ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 117797 cgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcccgtg 117738 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 117737 tgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtgaagtag 117678 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 117677 taccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 117619 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 117618 --taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaat 117561 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 |||||||||||| ||||| |||||| |||||||| |||||||||||||||||||| Sbjct: 117560 gagccggcgacttataggtagtggc-ctggttaag-----ggaacccaccggagccgtag 117507 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| |||||| ||||||||| |||||||||||||| |||||||||||| Sbjct: 117506 cgaaagcgagtcttcctagggcaattgtcactacttatggacccgaa-cctgggtgatct 117448 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 | |||||||||||||||||||||| |||||||||| Sbjct: 117447 aaccatgaccaggatgaagcttgggtgaaactaag 117413 Score = 874 bits (441), Expect = 0.0 Identities = 636/695 (91%), Gaps = 12/695 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 90006 gggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggagattc 90065 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||||| Sbjct: 90066 ccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacctg 90124 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 90125 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagc 90184 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| Sbjct: 90185 ggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaataag 90244 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||||||||| Sbjct: 90245 tgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagtagc 90304 Query: 302 cgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 ||||||||| || | || ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 90305 cgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcccgtg 90364 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 90365 tgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtgaagtag 90424 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 90425 taccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 90483 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 90484 --taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaat 90541 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 |||||||||||| ||||| |||||| |||||||| |||||||||||||||||||| Sbjct: 90542 gagccggcgacttataggtagtggc-ctggttaag-----ggaacccaccggagccgtag 90595 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| |||||| ||||||||| |||||||||||||| |||||||||||| Sbjct: 90596 cgaaagcgagtcttcctagggcaattgtcactacttatggacccgaa-cctgggtgatct 90654 Query: 661 atccatgaccaggatgaagcttggatgaaactaag 695 | |||||||||||||||||||||| |||||||||| Sbjct: 90655 aaccatgaccaggatgaagcttgggtgaaactaag 90689
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 872 bits (440), Expect = 0.0 Identities = 634/694 (91%), Gaps = 11/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 3943 gggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattc 4002 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| |||||| |||||||| || || | |||||||||||| || Sbjct: 4003 ccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaacttg 4061 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4062 gcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagtagc 4121 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4122 ggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataag 4181 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||||||| Sbjct: 4182 cgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagtagc 4241 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||| |||| |||| || | |||||||||||||||||||||||||||||||||| Sbjct: 4242 cgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgtgt 4301 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4302 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 4361 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| || Sbjct: 4362 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg-- 4419 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||| |||||||||| |||| ||| |||||||||||||||||||||||||||||| Sbjct: 4420 -taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatg 4478 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 ||||||||||| |||||||||||| |||||||| |||| ||||||||||||||| Sbjct: 4479 agccggcgacttataggcagtggc-ctggttaag-----ggaattcaccggagccgtagc 4532 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 4533 gaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 4591 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 4592 tccatgaccaggatgaagcttgggtgaaactaag 4625
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 872 bits (440), Expect = 0.0 Identities = 634/694 (91%), Gaps = 11/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 53 gggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattc 112 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| |||||| |||||||| || || | |||||||||||| || Sbjct: 113 ccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaacttg 171 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 172 gcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagtagc 231 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 232 ggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataag 291 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||||||| Sbjct: 292 cgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagtagc 351 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||| |||| |||| || | |||||||||||||||||||||||||||||||||| Sbjct: 352 cgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgtgt 411 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 412 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 471 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| || Sbjct: 472 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg-- 529 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||| |||||||||| |||| ||| |||||||||||||||||||||||||||||| Sbjct: 530 -taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatg 588 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 ||||||||||| |||||||||||| |||||||| |||| ||||||||||||||| Sbjct: 589 agccggcgacttataggcagtggc-ctggttaag-----ggaattcaccggagccgtagc 642 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 643 gaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 701 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 702 tccatgaccaggatgaagcttgggtgaaactaag 735
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 872 bits (440), Expect = 0.0 Identities = 634/694 (91%), Gaps = 11/694 (1%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 151192 gggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattc 151133 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| |||||| |||||||| || || | |||||||||||| || Sbjct: 151132 ccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaacttg 151074 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 151073 gcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagtagc 151014 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 151013 ggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataag 150954 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||||||| Sbjct: 150953 cgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagtagc 150894 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||| |||| |||| || | |||||||||||||||||||||||||||||||||| Sbjct: 150893 cgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgtgt 150834 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150833 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 150774 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| || Sbjct: 150773 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg-- 150716 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||| |||||||||| |||| ||| |||||||||||||||||||||||||||||| Sbjct: 150715 -taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatg 150657 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 ||||||||||| |||||||||||| |||||||| |||| ||||||||||||||| Sbjct: 150656 agccggcgacttataggcagtggc-ctggttaag-----ggaattcaccggagccgtagc 150603 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 150602 gaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 150544 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 150543 tccatgaccaggatgaagcttgggtgaaactaag 150510 Score = 872 bits (440), Expect = 0.0 Identities = 634/694 (91%), Gaps = 11/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 117474 gggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattc 117533 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| |||||| |||||||| || || | |||||||||||| || Sbjct: 117534 ccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaacttg 117592 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 117593 gcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagtagc 117652 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 117653 ggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataag 117712 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||||||| Sbjct: 117713 cgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagtagc 117772 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||| |||| |||| || | |||||||||||||||||||||||||||||||||| Sbjct: 117773 cgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgtgt 117832 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117833 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 117892 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| || Sbjct: 117893 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg-- 117950 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||| |||||||||| |||| ||| |||||||||||||||||||||||||||||| Sbjct: 117951 -taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatg 118009 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 ||||||||||| |||||||||||| |||||||| |||| ||||||||||||||| Sbjct: 118010 agccggcgacttataggcagtggc-ctggttaag-----ggaattcaccggagccgtagc 118063 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 118064 gaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 118122 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 118123 tccatgaccaggatgaagcttgggtgaaactaag 118156
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 872 bits (440), Expect = 0.0 Identities = 634/694 (91%), Gaps = 11/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 53 gggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccggagattc 112 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| |||||| |||||||| || || | |||||||||||| || Sbjct: 113 ccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaacttg 171 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 172 gcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtagtagc 231 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 232 ggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaatataag 291 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||||||| Sbjct: 292 cgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccagtagc 351 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||| |||| |||| || | |||||||||||||||||||||||||||||||||| Sbjct: 352 cgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatcccgtgt 411 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 412 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 471 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| || Sbjct: 472 accgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg-- 529 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 | |||| |||||||||| |||| ||| |||||||||||||||||||||||||||||| Sbjct: 530 -taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatg 588 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 ||||||||||| |||||||||||| |||||||| |||| ||||||||||||||| Sbjct: 589 agccggcgacttataggcagtggc-ctggttaag-----ggaattcaccggagccgtagc 642 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 643 gaaagcgagtcttcctagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 701 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 702 tccatgaccaggatgaagcttgggtgaaactaag 735
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 870 bits (439), Expect = 0.0 Identities = 637/698 (91%), Gaps = 15/698 (2%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 54 gggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatggatccggagattc 113 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| ||||||||||||||| |||||||| ||| || |||||||||||||| | Sbjct: 114 ccgaataggttaaccttttaaactgc-tgctgaattcataggcgggcaagagacaacccg 172 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 173 gcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattctcgtagtagc 232 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaa- 240 |||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| Sbjct: 233 ggcgagcgaaatgggagcggcctaaaccgtgaaaacggggttgtgggggagctatacaaa 292 Query: 241 ---gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 297 || ||| ||||||||||||||| ||||||| | |||||| |||||| | ||||||| Sbjct: 293 taagcattgcgctgctaggcgaagcagttgagtcctgcaccccagatggtgagagtccag 352 Query: 298 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 357 || |||||||||| || | |||||||||| |||||||||||||||||||||||||||||| Sbjct: 353 taaccgaaagcataacaatcttatgctctaacccgagtagcatggggcacgtggaatccc 412 Query: 358 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 472 Query: 418 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 477 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 473 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 532 Query: 478 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 537 || | |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 533 cg---taagctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaag 589 Query: 538 aatgagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccg 597 ||||||||||||||| |||||||||||| |||||||| ||||||||||||||||| Sbjct: 590 aatgagccggcgacttataggcagtggc-ctggttaag-----ggaacccaccggagccg 643 Query: 598 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtga 657 |||||||||| |||||| | |||| |||||||||||||||||||||||| ||||||||| Sbjct: 644 tagcgaaagcaagtcttcctggggcaattgtcactgcttatggacccgaa-cctgggtga 702 Query: 658 tctatccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||||||| |||||||||| Sbjct: 703 tctatccatgaccaggatgaagcttgggtgaaactaag 740
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 856 bits (432), Expect = 0.0 Identities = 624/682 (91%), Gaps = 12/682 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2097 gggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccggagattc 2156 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||||||| Sbjct: 2157 ccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaacctg 2215 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2216 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagc 2275 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| Sbjct: 2276 ggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaataag 2335 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||||||||| Sbjct: 2336 tgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccagtagc 2395 Query: 302 cgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 ||||||||| || | || ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2396 cgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcccgtg 2455 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 2456 tgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtgaagtag 2515 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 2516 taccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 2574 Query: 481 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | |||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 2575 --taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaat 2632 Query: 541 gagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtag 600 |||||||||||| ||||| |||||| |||||||| |||||||||||||||||||| Sbjct: 2633 gagccggcgacttataggtagtggc-ctggttaag-----ggaacccaccggagccgtag 2686 Query: 601 cgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatct 660 |||||||||||||| |||||| ||||||||| |||||||||||||| |||||||||||| Sbjct: 2687 cgaaagcgagtcttcctagggcaattgtcactacttatggacccgaa-cctgggtgatct 2745 Query: 661 atccatgaccaggatgaagctt 682 | |||||||||||||||||||| Sbjct: 2746 aaccatgaccaggatgaagctt 2767
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 829 bits (418), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 37 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 96 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 97 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 156 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 157 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 216 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 217 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 277 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 336 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 337 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 396 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 397 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 457 tagtga 462 |||||| Sbjct: 421 tagtga 426
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 813 bits (410), Expect = 0.0 Identities = 482/504 (95%), Gaps = 4/504 (0%) Strand = Plus / Minus Query: 1 ggggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagatt 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130483 ggggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagatt 130424 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacct 120 ||| ||||||||||||||| |||| | ||||||||||||| |||||||||||||||||| Sbjct: 130423 cccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaagagacaacct 130365 Query: 121 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130364 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 130305 Query: 181 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaa 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 130304 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaa 130245 Query: 241 gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 300 |||| |||||||||||||||||||| ||||||||||||||||||||| | |||||||||| Sbjct: 130244 gcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtag 130185 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130184 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 130125 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 130124 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtag 130065 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 130064 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 130006 Query: 481 gctgagctcccaagcagtgggagg 504 | |||||||||||||||||||| Sbjct: 130005 --taagctcccaagcagtgggagg 129984 Score = 813 bits (410), Expect = 0.0 Identities = 482/504 (95%), Gaps = 4/504 (0%) Strand = Plus / Plus Query: 1 ggggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagatt 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101973 ggggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagatt 102032 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacct 120 ||| ||||||||||||||| |||| | ||||||||||||| |||||||||||||||||| Sbjct: 102033 cccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaagagacaacct 102091 Query: 121 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102092 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 102151 Query: 181 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaa 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 102152 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaa 102211 Query: 241 gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 300 |||| |||||||||||||||||||| ||||||||||||||||||||| | |||||||||| Sbjct: 102212 gcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagtag 102271 Query: 301 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102272 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 102331 Query: 361 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 102332 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagtag 102391 Query: 421 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 480 ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 102392 taccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg- 102450 Query: 481 gctgagctcccaagcagtgggagg 504 | |||||||||||||||||||| Sbjct: 102451 --taagctcccaagcagtgggagg 102472 Score = 248 bits (125), Expect = 2e-62 Identities = 169/181 (93%), Gaps = 7/181 (3%) Strand = Plus / Minus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 574 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggctt-ggttaa 129911 Query: 575 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 634 ||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 129910 gggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 129856 Query: 635 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 694 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 129855 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 129797 Query: 695 g 695 | Sbjct: 129796 g 129796 Score = 248 bits (125), Expect = 2e-62 Identities = 169/181 (93%), Gaps = 7/181 (3%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 574 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggctt-ggttaa 102545 Query: 575 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 634 ||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 102546 gggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 102600 Query: 635 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 694 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 102601 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 102659 Query: 695 g 695 | Sbjct: 102660 g 102660
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 795 bits (401), Expect = 0.0 Identities = 470/491 (95%), Gaps = 4/491 (0%) Strand = Plus / Plus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 73 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 46317 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccgaataggtca 46376 Query: 74 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 133 |||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 46377 acctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 46435 Query: 134 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46436 atcttactagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 46495 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 46496 gggaacagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 46555 Query: 254 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 313 |||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 46556 aggcgaagcggtggagtaccgcaccctagatggctagagtccagtagccgaaagcatcac 46615 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46616 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 46675 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46676 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 46735 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||||||||| ||| ||||||||||||| |||||||| | ||||| ||| Sbjct: 46736 gggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctctcaa 46792 Query: 494 gcagtgggagg 504 ||||||||||| Sbjct: 46793 gcagtgggagg 46803 Score = 264 bits (133), Expect = 4e-67 Identities = 171/181 (94%), Gaps = 7/181 (3%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 574 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt-ggttaa 46876 Query: 575 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 634 |||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 46877 gggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 46931 Query: 635 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 694 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 46932 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 46990 Query: 695 g 695 | Sbjct: 46991 g 46991
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 795 bits (401), Expect = 0.0 Identities = 479/503 (95%), Gaps = 4/503 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 61 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 120 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 121 ccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 179 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 180 gcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagc 239 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 299 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||||| Sbjct: 300 cgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagc 359 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 360 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 419 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 420 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtact 479 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||| ||| |||||||| Sbjct: 480 accgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg-- 537 Query: 482 ctgagctcccaagcagtgggagg 504 | |||||||||||||||||||| Sbjct: 538 -taagctcccaagcagtgggagg 559 Score = 188 bits (95), Expect = 2e-44 Identities = 111/115 (96%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 581 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 640 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 618 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 677 Query: 641 acccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 ||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 678 acccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 731
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 795 bits (401), Expect = 0.0 Identities = 479/503 (95%), Gaps = 4/503 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 61 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 120 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 121 ccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 179 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 180 gcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagc 239 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 299 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||||| Sbjct: 300 cgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagc 359 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 360 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 419 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 420 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtact 479 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| || ||||||||||||| |||||||| Sbjct: 480 accgtgagggaagggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg-- 537 Query: 482 ctgagctcccaagcagtgggagg 504 | |||||||||||||||||||| Sbjct: 538 -taagctcccaagcagtgggagg 559 Score = 232 bits (117), Expect = 1e-57 Identities = 167/181 (92%), Gaps = 7/181 (3%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 574 |||||| ||||||||||||||||||| | |||||||||||||||||||||||| |||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggctt-ggttaa 639 Query: 575 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 634 |||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 gggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 635 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 694 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 695 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 753 Query: 695 g 695 | Sbjct: 754 g 754
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 787 bits (397), Expect = 0.0 Identities = 478/503 (95%), Gaps = 4/503 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 61 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 120 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 121 ccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 179 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 180 gcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagc 239 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 299 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||||| Sbjct: 300 cgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagc 359 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 360 cgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 419 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 420 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaat 479 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| || ||||||||||||| |||||||| Sbjct: 480 accgtgagggaagggtgaaaagaacccccatccgggagtgaaatagaacatgaaaccg-- 537 Query: 482 ctgagctcccaagcagtgggagg 504 | |||||||||||||||||||| Sbjct: 538 -taagctcccaagcagtgggagg 559 Score = 198 bits (100), Expect = 2e-47 Identities = 164/181 (90%), Gaps = 7/181 (3%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 574 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||| |||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggctt-ggttaa 638 Query: 575 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 634 || ||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 639 cgg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 635 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 694 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 695 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 753 Query: 695 g 695 | Sbjct: 754 g 754
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 787 bits (397), Expect = 0.0 Identities = 478/503 (95%), Gaps = 4/503 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 61 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 120 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 121 ccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 179 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 180 gcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagc 239 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 299 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||||| Sbjct: 300 cgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagc 359 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 360 cgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 419 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 420 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaat 479 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||| ||| |||||||| Sbjct: 480 accgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaaccg-- 537 Query: 482 ctgagctcccaagcagtgggagg 504 | |||||||||||||||||||| Sbjct: 538 -taagctcccaagcagtgggagg 559 Score = 200 bits (101), Expect = 4e-48 Identities = 164/181 (90%), Gaps = 8/181 (4%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 574 |||||| |||||||||||| || ||||||||| ||||||||||| |||||||| |||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggctt-ggttaa 638 Query: 575 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 634 |||||| ||| ||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 639 gggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 693 Query: 635 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 694 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 694 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 752 Query: 695 g 695 | Sbjct: 753 g 753
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 787 bits (397), Expect = 0.0 Identities = 478/503 (95%), Gaps = 4/503 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 61 gggcgtagtaagcgacgaaatgcttcggggggttgaaaataagcgtagatccggagattc 120 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 121 ccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 179 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 180 gcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagc 239 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 299 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||||||| Sbjct: 300 cgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccagtagc 359 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 360 cgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 419 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 420 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtaat 479 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 480 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg-- 537 Query: 482 ctgagctcccaagcagtgggagg 504 | |||||||||||||||||||| Sbjct: 538 -taagctcccaagcagtgggagg 559 Score = 210 bits (106), Expect = 5e-51 Identities = 167/182 (91%), Gaps = 9/182 (4%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 574 |||||| ||||||||||||||| ||||||||||||||||||||| |||||||| |||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggctt-ggttaa 638 Query: 575 gggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactg 633 |||||| |||||||| ||||||||||||||||||||| |||||| |||||||||| Sbjct: 639 gggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactg 693 Query: 634 cttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaacta 693 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 694 cttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 752 Query: 694 ag 695 || Sbjct: 753 ag 754
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 773 bits (390), Expect = 0.0 Identities = 616/683 (90%), Gaps = 15/683 (2%) Strand = Plus / Plus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 73 ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| || | Sbjct: 65 cgacgaaatgcttcggggagttgaaaataagcatagatccgtagattcccgaatggggta 124 Query: 74 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 133 |||||| | ||||| |||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 125 acctttcacactgc-tgctcaatccatgggcaggaaagagacaacctggcgaactgaaac 183 Query: 134 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 184 atcttagtagccagaggaaaataaagcaaaagcgattcccatagtagcggcgagcgaaat 243 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 |||| |||||||||||| |||||||||||||||||||||||||| |||||| |||||||| Sbjct: 244 gggatcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgct 303 Query: 254 aggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 312 ||||||||| | || | || |||||||||||||| |||||||||||| | ||||||||| Sbjct: 304 aggcgaagcagcttaaatgatgcaccctagatggcgaaagtccagtagtcaaaagcatca 363 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 ||| || |||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct: 364 ctacgttgcgctctgacccgagtagcatgggacacgtgtaatcccgtgtgaatcagcaag 423 Query: 373 gaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgaggga 432 ||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||| Sbjct: 424 gaccaccttgcaaggctaaatactcctgggtaaccaatagtaaagtagtaccgtgaggga 483 Query: 433 aaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccca 492 | ||||||||||| ||||| |||| ||||||||||||| |||||||| | |||| ||| Sbjct: 484 agggtgaaaagaa-ccccattggggagtgaaatagaacatgaaaccg---taagctacca 539 Query: 493 agcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||| | || | |||||||||||||||||||||||||||||||||||||| Sbjct: 540 agcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgact 597 Query: 553 cataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 612 ||||||||| ||| ||||||||| |||||||||||||||| |||||||||||||| Sbjct: 598 cataggcagcggc-ttggttaag-----ggaacccaccggagccatagcgaaagcgagta 651 Query: 613 ttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgaccag 672 || ||||| | |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 652 ttcataggactattgtcactgcttatggacccgaa-cctgggtgatctatccatgaccag 710 Query: 673 gatgaagcttggatgaaactaag 695 |||||||||| | |||||||||| Sbjct: 711 gatgaagctttggtgaaactaag 733
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 773 bits (390), Expect = 0.0 Identities = 507/542 (93%), Gaps = 7/542 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 161 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||| Sbjct: 162 ccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagacaacctg 220 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 221 gcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagc 280 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 281 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataaaag 340 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| |||||||||||||||||||| ||||||| |||||||||||| | ||||||||||| Sbjct: 341 cgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccagtagc 400 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 401 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 460 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 520 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| |||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 521 accgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg-- 578 Query: 482 ctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaat 540 | ||||||||||||| |||||| | || | |||||||||||||||||||||||||| Sbjct: 579 -taagctcccaagcagngggaggagcccaggg--ctctgaccgcgtgcctgttgaagaat 635 Query: 541 ga 542 || Sbjct: 636 ga 637
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 765 bits (386), Expect = 0.0 Identities = 406/410 (99%), Gaps = 2/410 (0%) Strand = Plus / Plus Query: 286 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 345 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 346 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 406 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 466 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 526 tgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaac 585 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaac 299 Query: 586 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 645 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 300 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 359 Query: 646 aaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 aa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 408
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 759 bits (383), Expect = 0.0 Identities = 486/516 (94%), Gaps = 7/516 (1%) Strand = Plus / Minus Query: 53 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 112 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 113 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 173 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 233 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 291 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 292 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 352 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 411 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 412 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 471 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 472 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 531 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 39 Query: 532 ttgaagaatgagccggcgactcataggcagtggctt 567 |||||||||||||||||||||||||||||||||||| Sbjct: 38 ttgaagaatgagccggcgactcataggcagtggctt 3
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 745 bits (376), Expect = 0.0 Identities = 457/481 (95%), Gaps = 6/481 (1%) Strand = Plus / Plus Query: 88 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 147 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 148 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 208 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 266 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 267 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 326 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 327 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 387 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 446 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 447 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 506 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 507 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 566 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 491 Query: 567 t 567 | Sbjct: 492 t 492
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 720 bits (363), Expect = 0.0 Identities = 466/497 (93%), Gaps = 5/497 (1%) Strand = Plus / Plus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 73 |||||||||||||||||||||||||||||||| |||||||||||||||| |||||| || Sbjct: 73 cgacgaaatgcttcggggagttgaaaataagccgagatccggagattcccgaatagggca 132 Query: 74 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 133 |||||| |||| | ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 133 acctttcgaacttc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaaac 191 Query: 134 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 192 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 251 Query: 194 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgct 253 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 252 gggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgct 311 Query: 254 aggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcac 313 ||||||| | || |||||| | ||||||||||| ||||||||||||||||||||||||| Sbjct: 312 aggcgaatctgtggagtgcggtaccctagatggtgaaagtccagtagccgaaagcatcac 371 Query: 314 tagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 373 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 tagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaagg 431 Query: 374 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 accaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaa 491 Query: 434 aggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 493 ||||||||||| ||||| ||| ||||||||| ||| |||||||| | ||||| ||| Sbjct: 492 gggtgaaaagaa-ccccatcggggagtgaaataaaacatgaaaccg---taagctctcaa 547 Query: 494 gcagtgggaggggaaag 510 ||||||||||| ||||| Sbjct: 548 gcagtgggaggagaaag 564 Score = 188 bits (95), Expect = 2e-44 Identities = 111/115 (96%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 581 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 640 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 641 acccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 ||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 662 acccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 715
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 710 bits (358), Expect = 0.0 Identities = 429/449 (95%), Gaps = 4/449 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 50 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 109 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 110 ccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctg 168 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 228 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 288 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| |||||||||||||||||||| || | | |||||||||||||| | ||||||||||| Sbjct: 289 cgtcgtgctgctaggcgaagcggtggaatactgcaccctagatggcgatagtccagtagc 348 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 349 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 408 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 ||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||| Sbjct: 409 gaatcagcaaggaccaccttgcaaggctaaatactac--ggtgaccgatagtgaagtagt 466 Query: 422 accgtgagggaaaggtgaaaagaaccccc 450 |||||||||||| |||| ||||||||||| Sbjct: 467 accgtgagggaagggtg-aaagaaccccc 494 Score = 176 bits (89), Expect = 6e-41 Identities = 130/142 (91%), Gaps = 5/142 (3%) Strand = Plus / Plus Query: 555 taggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 614 ||||||||||||| | | |||||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 615 aatagggcgattgtcactgcttatggacccgaaccct-gggtgatctatccatgaccagg 673 ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 674 atgaagcttggatgaaactaag 695 ||||||||||| |||||||||| Sbjct: 729 atgaagcttgggtgaaactaag 750
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 46 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 105 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 106 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 166 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 226 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 286 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 345 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 346 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 406 ccgata 411 |||||| Sbjct: 361 ccgata 366
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 704 bits (355), Expect = 0.0 Identities = 419/439 (95%), Gaps = 1/439 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 30 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggagattc 89 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||||||| Sbjct: 90 ccgaataggtcaacctttcaaactgc-tgccgaatccatgggcaggcaagagacaacctg 148 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 149 gcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtagtagc 208 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 268 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 ||| ||||||||||||||||||| || ||||||||||||||| ||||||||||| Sbjct: 269 cgtcgtgctgctaggcgaagcggccgaacaccgcaccctagatggtgggagtccagtagc 328 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 329 cgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgt 388 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 448 Query: 422 accgtgagggaaaggtgaa 440 |||||||||||| |||||| Sbjct: 449 accgtgagggaagggtgaa 467
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 670 bits (338), Expect = 0.0 Identities = 350/354 (98%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 123417 gggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccggagattc 123358 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 123357 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 123298 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123297 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 123238 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123237 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 123178 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123177 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 123118 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 355 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123117 cgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 123064 Score = 630 bits (318), Expect = e-177 Identities = 344/350 (98%), Gaps = 2/350 (0%) Strand = Plus / Minus Query: 347 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 407 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 467 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 527 gcctgttgaagaatgagccggcgactcataggcagtg-gctttggttaagggaacggaac 585 ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 122581 Query: 586 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 645 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122580 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 122521 Query: 646 aaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122520 aa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 122472
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 670 bits (338), Expect = 0.0 Identities = 350/354 (98%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 12825958 gggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccggagattc 12825899 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 12825898 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 12825839 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825838 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 12825779 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825778 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 12825719 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825718 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 12825659 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 355 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825658 cgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 630 bits (318), Expect = e-177 Identities = 344/350 (98%), Gaps = 2/350 (0%) Strand = Plus / Minus Query: 347 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 407 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 467 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 527 gcctgttgaagaatgagccggcgactcataggcagtg-gctttggttaagggaacggaac 585 ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 12825122 Query: 586 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 645 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12825121 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccg 12825062 Query: 646 aaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825061 aa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 12825013 Score = 87.7 bits (44), Expect = 5e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 292 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 351 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 666 bits (336), Expect = 0.0 Identities = 356/360 (98%), Gaps = 2/360 (0%) Strand = Plus / Plus Query: 336 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 396 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 456 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 515 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 516 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaag 575 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaag 239 Query: 576 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 635 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 240 ggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgct 299 Query: 636 tatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 tatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 358
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 642 bits (324), Expect = 0.0 Identities = 341/344 (99%), Gaps = 2/344 (0%) Strand = Plus / Plus Query: 352 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 412 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 472 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 532 ttgaagaatgagccggcgactcataggcagtggctttggttaagggaacggaacccaccg 591 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggc-ttggttaagggaacggaacccaccg 239 Query: 592 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccct 651 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 240 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cct 298 Query: 652 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 gggtgatctatccatgaccaggatgaagcttggatgaaactaag 342
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 595 bits (300), Expect = e-167 Identities = 600/694 (86%), Gaps = 7/694 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||| |||| |||||||||||||||||||| ||||||| | |||||||||||||||| Sbjct: 143972 gggcgtggcaaacgacgaaatgcttcggggagccgaaaataggtatagatccggagattc 144031 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||| |||||||||||||||| || ||||| |||||||||||| | Sbjct: 144032 ccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaagagacaacccg 144091 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||| ||||| | |||||||||||||||||| ||||| | Sbjct: 144092 gcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcccctagtaac 144151 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||| |||| |||| ||||||||||||||| ||||||||||||||||| || | Sbjct: 144152 ggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagagtgatgaggg 144211 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 | | || | ||||||||||| ||||||||| |||||| |||||| | ||||||||||| Sbjct: 144212 cttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatagtccagtagc 144271 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 || ||| | |||||| | |||| |||| |||||||||||||||| |||||||||| Sbjct: 144272 cggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaaatcccgtgt 144331 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||| ||| Sbjct: 144332 gaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgatagcgaagcagt 144391 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 144392 accgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg-- 144449 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 ||||||||||||||||||||| ||| | ||||||| |||||||||||||||||||||| Sbjct: 144450 -cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaatg 144508 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 ||||||||||| ||||| ||||| ||||||||| |||||| ||||||||||||| Sbjct: 144509 agccggcgacttgtaggcggtggc-ccggttaaggg-ggagaaccc-ccggagccgtagc 144565 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| | |||| |||||||| |||||| ||||||| ||||||||||||| Sbjct: 144566 gaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaa-cctgggtgatcta 144624 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 144625 tccatgaccaggatgaagcttgggtgaaactaag 144658 Score = 595 bits (300), Expect = e-167 Identities = 600/694 (86%), Gaps = 7/694 (1%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||| |||| |||||||||||||||||||| ||||||| | |||||||||||||||| Sbjct: 88879 gggcgtggcaaacgacgaaatgcttcggggagccgaaaataggtatagatccggagattc 88820 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||| |||||| |||||||||||||||| || ||||| |||||||||||| | Sbjct: 88819 ccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaagagacaacccg 88760 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||| ||||| | |||||||||||||||||| ||||| | Sbjct: 88759 gcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcccctagtaac 88700 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||| |||| |||| ||||||||||||||| ||||||||||||||||| || | Sbjct: 88699 ggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagagtgatgaggg 88640 Query: 242 cgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagc 301 | | || | ||||||||||| ||||||||| |||||| |||||| | ||||||||||| Sbjct: 88639 cttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatagtccagtagc 88580 Query: 302 cgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgt 361 || ||| | |||||| | |||| |||| |||||||||||||||| |||||||||| Sbjct: 88579 cggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaaatcccgtgt 88520 Query: 362 gaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagt 421 |||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||| ||| Sbjct: 88519 gaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgatagcgaagcagt 88460 Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 ||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 88459 accgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaaccg-- 88402 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 ||||||||||||||||||||| ||| | ||||||| |||||||||||||||||||||| Sbjct: 88401 -cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaatg 88343 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 ||||||||||| ||||| ||||| ||||||||| |||||| ||||||||||||| Sbjct: 88342 agccggcgacttgtaggcggtggc-ccggttaaggg-ggagaaccc-ccggagccgtagc 88286 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| | |||| |||||||| |||||| ||||||| ||||||||||||| Sbjct: 88285 gaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaa-cctgggtgatcta 88227 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 88226 tccatgaccaggatgaagcttgggtgaaactaag 88193
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 73 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 132 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 133 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 193 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 253 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 312 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 313 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 373 gaccaccttgcaaggctaaatactcctgggtg 404 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 551 bits (278), Expect = e-153 Identities = 437/484 (90%), Gaps = 12/484 (2%) Strand = Plus / Minus Query: 213 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 272 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 273 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 332 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 333 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 393 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 452 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 453 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 512 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 513 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtt 572 |||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggc-ttggtt 5929 Query: 573 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 632 ||| || |||||||||||||||||||| |||||||||| ||||||| ||||||||| Sbjct: 5928 aag-----ggcacccaccggagccgtagcgagagcgagtcttcatagggcaattgtcact 5874 Query: 633 gc-ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaac 691 || ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 5873 gctttatggacccgaa-cctgggtgatctatccatgaccaggatgaagc-tggatgaaac 5816 Query: 692 taag 695 |||| Sbjct: 5815 taag 5812 Score = 262 bits (132), Expect = 1e-66 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 12 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 71 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 72 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 131 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 132 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 191 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 192 atgggagcagcctaaaccgt 211 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 543 bits (274), Expect = e-151 Identities = 511/585 (87%), Gaps = 15/585 (2%) Strand = Plus / Minus Query: 106 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 165 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 139114 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 139055 Query: 166 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 225 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 139054 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 138995 Query: 226 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 281 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 138994 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 138936 Query: 282 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 341 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 138935 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 138876 Query: 342 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 401 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 138875 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 138816 Query: 402 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 461 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 138815 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 138756 Query: 462 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 521 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 138755 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 138699 Query: 522 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacg 581 ||||||||||||||||||||||||||||||| |||||| | ||| |||||||| | Sbjct: 138698 cgcgtgcctgttgaagaatgagccggcgacttataggcggcggc-ctggttaag-----g 138645 Query: 582 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 641 ||||||||||||||||||||||||||||||||| ||||| | |||| ||||||||||| Sbjct: 138644 gaacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatgga 138585 Query: 642 cccgaaccctgggtgatctatccatgaccaggatgaagcttggat 686 ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 138584 cccgaaccc-gggtgatctatccatgaccaggatgaagcttggat 138541 Score = 543 bits (274), Expect = e-151 Identities = 511/585 (87%), Gaps = 15/585 (2%) Strand = Plus / Plus Query: 106 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 165 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 82763 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 82822 Query: 166 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 225 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 82823 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 82882 Query: 226 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 281 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 82883 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 82941 Query: 282 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 341 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 82942 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 83001 Query: 342 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 401 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 83002 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 83061 Query: 402 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 461 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 83062 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 83121 Query: 462 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 521 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 83122 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 83178 Query: 522 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagggaacg 581 ||||||||||||||||||||||||||||||| |||||| | ||| |||||||| | Sbjct: 83179 cgcgtgcctgttgaagaatgagccggcgacttataggcggcggc-ctggttaag-----g 83232 Query: 582 gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 641 ||||||||||||||||||||||||||||||||| ||||| | |||| ||||||||||| Sbjct: 83233 gaacccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatgga 83292 Query: 642 cccgaaccctgggtgatctatccatgaccaggatgaagcttggat 686 ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 83293 cccgaaccc-gggtgatctatccatgaccaggatgaagcttggat 83336
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 504 bits (254), Expect = e-139 Identities = 347/373 (93%), Gaps = 5/373 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 2652 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggattc 2711 Query: 62 ccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacct 120 || | |||||||||||||| |||||| ||||||||||| | |||||||||||||||| | Sbjct: 2712 ccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaactt 2770 Query: 121 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 180 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2771 ggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 2830 Query: 181 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaa 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2831 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaa 2890 Query: 241 gcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtccagt 298 | || ||||||||||||||||| | ||| ||| |||||||||||||| | |||||||| Sbjct: 2891 gtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtccagt 2950 Query: 299 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 358 |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 2951 agccgaaagcatcact-gcttacgctctgacccgagtagcatagggcacgtggaatcccg 3009 Query: 359 tgtgaatcagcaa 371 ||||||||||||| Sbjct: 3010 tgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 504 bits (254), Expect = e-139 Identities = 347/373 (93%), Gaps = 5/373 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 907 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccggggattc 966 Query: 62 ccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacct 120 || | |||||||||||||| |||||| ||||||||||| | |||||||||||||||| | Sbjct: 967 ccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagacaactt 1025 Query: 121 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 180 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1026 ggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 1085 Query: 181 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaa 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1086 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctatacaa 1145 Query: 241 gcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtccagt 298 | || ||||||||||||||||| | ||| ||| |||||||||||||| | |||||||| Sbjct: 1146 gtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtccagt 1205 Query: 299 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 358 |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 1206 agccgaaagcatcact-gcttacgctctgacccgagtagcatagggcacgtggaatcccg 1264 Query: 359 tgtgaatcagcaa 371 ||||||||||||| Sbjct: 1265 tgtgaatcagcaa 1277
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 474 bits (239), Expect = e-130 Identities = 242/243 (99%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 110 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 111 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 170 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 230 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 290 Query: 242 cgt 244 ||| Sbjct: 291 cgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 474 bits (239), Expect = e-130 Identities = 242/243 (99%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 110 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 111 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 170 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 171 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 230 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 231 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 290 Query: 242 cgt 244 ||| Sbjct: 291 cgt 293
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 448 bits (226), Expect = e-122 Identities = 306/330 (92%), Gaps = 2/330 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 177084 gggcgtagtaatcgacgaaatgcttcggggagttgaaaatcagcatagatccggagattc 177143 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||||| |||||| ||||||||||||| |||||||||||| |||| | Sbjct: 177144 ccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagagaaccag 177202 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177203 gcgaactgaaagatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 177262 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaag 241 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 177263 ggcgggcgaaatgggagctgcctaaaccgtgaaaacggggttgtgggagagcaatacaag 177322 Query: 242 cgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtccagtag 300 ||| |||| |||||||||||| | || ||| |||||||||||||| |||||||||||| Sbjct: 177323 cgtcgtgcagctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtag 177382 Query: 301 ccgaaagcatcactagcttatgctctgacc 330 |||||||||||||||||||| ||||||||| Sbjct: 177383 ccgaaagcatcactagcttaggctctgacc 177412 Score = 264 bits (133), Expect = 4e-67 Identities = 171/181 (94%), Gaps = 7/181 (3%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 574 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt-ggttaa 177463 Query: 575 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 634 |||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 177464 gggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 177518 Query: 635 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 694 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 177519 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 177577 Query: 695 g 695 | Sbjct: 177578 g 177578 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 122 gcgaactgaaacatcttagtagc 144 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 122 gcgaactgaaacatcttagtagc 144 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 414 bits (209), Expect = e-112 Identities = 263/279 (94%), Gaps = 4/279 (1%) Strand = Plus / Plus Query: 289 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 348 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 349 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 409 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 468 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 469 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 528 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 529 ctgttgaagaatgagccggcgactcataggcagtggctt 567 ||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggctt 277
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 68 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 127 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 128 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 187 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 188 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 247 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 248 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 307 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 308 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 367 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 368 gcaaggaccaccttgcaag 386 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 141 bits (71), Expect = 3e-30 Identities = 120/135 (88%), Gaps = 6/135 (4%) Strand = Plus / Minus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 574 |||||||||||| ||| ||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggctt-ggttaa 3191 Query: 575 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 634 |||||| ||||||||||| ||||||||||||||| ||| |||| ||| ||||||| Sbjct: 3190 gggaac-----ccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgc 3136 Query: 635 ttatggacccgaacc 649 ||||||||||||||| Sbjct: 3135 ttatggacccgaacc 3121 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 395 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 454 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 455 ggtagtgaaatagaacgtgaaacc 478 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 12 agcgacgaaatgcttcggggagttgaaaataagcatagatccggag 57 |||||||||||||||| | |||||| |||||||| |||||| |||| Sbjct: 3739 agcgacgaaatgcttcagagagttgcaaataagcgtagatcaggag 3694
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 165 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 224 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 225 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 283 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 284 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 343 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 344 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 403 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 404 gaccgata 411 |||||||| Sbjct: 241 gaccgata 248
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 396 bits (200), Expect = e-107 Identities = 385/442 (87%), Gaps = 11/442 (2%) Strand = Plus / Plus Query: 250 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 309 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 310 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 369 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 370 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 429 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 430 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 489 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 490 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 549 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 550 actcataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcga 609 ||| |||||||||||| |||||||| |||| ||||||||||||||||||||||| Sbjct: 599 acttataggcagtggc-gtggttaag-----ggaattcaccggagccgtagcgaaagcga 652 Query: 610 gtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgac 669 ||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 653 gtc-taacagggcgattgtcactgcttatggacccgaaccc-gggtgatctatccatggc 710 Query: 670 caggatgaagcttggatgaaac 691 ||||||||||||||| |||||| Sbjct: 711 caggatgaagcttgggtgaaac 732 Score = 246 bits (124), Expect = 8e-62 Identities = 205/232 (88%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||| | ||||||||||||||||||||||| || || ||||||||||||| ||| | Sbjct: 54 gggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaagaccc 113 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||| || ||| | |||||||||||| ||| | |||||| |||||| Sbjct: 114 ccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataacctg 173 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 174 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagtagc 233 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 233 ||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 234 ggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 285
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 392 bits (198), Expect = e-106 Identities = 556/661 (84%), Gaps = 22/661 (3%) Strand = Plus / Plus Query: 18 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 76 ||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgctttggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 77 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 136 ||| |||||| |||| | |||||| |||| ||||||| ||||||| ||||||||||||| Sbjct: 128 ttt--aactgc-tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatc 182 Query: 137 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 196 |||||||||||||||||| |||||||||| |||||| |||||| ||| | |||| ||| Sbjct: 183 ttagtagccagaggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaaggg 242 Query: 197 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 256 | ||||||||| || |||| ||||||| || ||||||| ||| || || |||||| Sbjct: 243 aacagcctaaatcgctaaaatggggttgggg---agcaataaaagtattttgttgctaga 299 Query: 257 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 316 || || || |||| | | ||||||||||| | |||||||||| |||| |||| ||| Sbjct: 300 cggagtagtggagttctgaaccctagatggtgagagtccagtagtataaagtatcattag 359 Query: 317 cttatgctctga-cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 375 |||||||| | | ||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 360 cttatgcttttaacccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggac 419 Query: 376 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 435 ||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||| | Sbjct: 420 caccttgaaaggctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagg 479 Query: 436 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 495 |||||||||||||||| |||| |||||| |||||| ||||| | | ||| |||||| Sbjct: 480 gtgaaaagaacccccattggggagtgaactagaacatgaaaac---atatgctaccaagc 536 Query: 496 agtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 555 ||||||||| || || | |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 537 agtgggaggagacaggg--ctctgaccacgtgcccgttgaagaatgagtcggcgactcat 594 Query: 556 aggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctta 615 | | |||||| ||||||||| |||| ||||||||||| |||||||||| |||||| Sbjct: 595 aagtagtggc-ctggttaagg----ggaa-ccaccggagccatagcgaaagcaagtcttc 648 Query: 616 atagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgaccaggat 675 |||||| | ||||| ||||| |||||||||| | ||||||||||| ||||||||||||| Sbjct: 649 atagggaaaatgtcattgcttgtggacccgaa-cttgggtgatctaaccatgaccaggat 707 Query: 676 g 676 | Sbjct: 708 g 708
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 392 bits (198), Expect = e-106 Identities = 383/440 (87%), Gaps = 11/440 (2%) Strand = Plus / Minus Query: 250 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 309 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 310 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 369 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 370 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 429 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 430 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 489 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 490 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 549 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 550 actcataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcga 609 ||| |||||||||||| |||||||| |||| ||||||||||||||||||||||| Sbjct: 124666 acttataggcagtggc-gtggttaag-----ggaattcaccggagccgtagcgaaagcga 124613 Query: 610 gtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgac 669 ||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 124612 gtc-taacagggcgattgtcactgcttatggacccgaaccc-gggtgatctatccatggc 124555 Query: 670 caggatgaagcttggatgaa 689 ||||||||||||||| |||| Sbjct: 124554 caggatgaagcttgggtgaa 124535 Score = 392 bits (198), Expect = e-106 Identities = 383/440 (87%), Gaps = 11/440 (2%) Strand = Plus / Plus Query: 250 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 309 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 310 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 369 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 370 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 429 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 430 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 489 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 490 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 549 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 550 actcataggcagtggctttggttaagggaacggaacccaccggagccgtagcgaaagcga 609 ||| |||||||||||| |||||||| |||| ||||||||||||||||||||||| Sbjct: 95200 acttataggcagtggc-gtggttaag-----ggaattcaccggagccgtagcgaaagcga 95253 Query: 610 gtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatccatgac 669 ||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 95254 gtc-taacagggcgattgtcactgcttatggacccgaaccc-gggtgatctatccatggc 95311 Query: 670 caggatgaagcttggatgaa 689 ||||||||||||||| |||| Sbjct: 95312 caggatgaagcttgggtgaa 95331 Score = 246 bits (124), Expect = 8e-62 Identities = 205/232 (88%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||| | ||||||||||||||||||||||| || || ||||||||||||| ||| | Sbjct: 125211 gggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaagaccc 125152 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||| || ||| | |||||||||||| ||| | |||||| |||||| Sbjct: 125151 ccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataacctg 125092 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 125091 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagtagc 125032 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 233 ||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 125031 ggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 124980 Score = 246 bits (124), Expect = 8e-62 Identities = 205/232 (88%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||| | ||||||||||||||||||||||| || || ||||||||||||| ||| | Sbjct: 94655 gggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaagaccc 94714 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||| || ||| | |||||||||||| ||| | |||||| |||||| Sbjct: 94715 ccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataacctg 94774 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 94775 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagtagc 94834 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 233 ||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 94835 ggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 94886
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 387 bits (195), Expect = e-104 Identities = 324/362 (89%), Gaps = 10/362 (2%) Strand = Plus / Plus Query: 328 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 387 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 388 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 447 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 507 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 508 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 567 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-c 613 Query: 568 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 627 ||||||||| | ||| | ||||||||||||||||||||||||| |||||||| || Sbjct: 614 tggttaaggcga--gaagc---cggagccgtagcgaaagcgagtctttctagggcgaatg 668 Query: 628 tcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatg 687 ||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| || Sbjct: 669 tcactgcttatggacccgaaccc-gggtgatctaaccatggccagggtgaagcttgggtg 727 Query: 688 aa 689 || Sbjct: 728 aa 729 Score = 258 bits (130), Expect = 2e-65 Identities = 190/210 (90%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||| ||| || |||||| ||||||||||| | Sbjct: 41 gggcgtagcaagcgacgaaatgcttcggggagctgagaacaagcattgatccggagatgc 100 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| ||||| || |||||||||||||| || | ||||||||||||||||| Sbjct: 101 ccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaacctg 160 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 161 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagtagt 220 Query: 182 ggcgagcgaaatgggagcagcctaaaccgt 211 |||||||||||||||| ||||||||||||| Sbjct: 221 ggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 387 bits (195), Expect = e-104 Identities = 324/362 (89%), Gaps = 10/362 (2%) Strand = Plus / Plus Query: 328 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 387 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 388 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 447 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 507 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 508 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 567 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-c 626 Query: 568 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 627 ||||||||| | ||| | ||||||||||||||||||||||||| |||||||| || Sbjct: 627 tggttaaggcga--gaagc---cggagccgtagcgaaagcgagtctttctagggcgaatg 681 Query: 628 tcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatg 687 ||||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||| || Sbjct: 682 tcactgcttatggacccgaaccc-gggtgatctaaccatggccagggtgaagcttgggtg 740 Query: 688 aa 689 || Sbjct: 741 aa 742 Score = 258 bits (130), Expect = 2e-65 Identities = 190/210 (90%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||| ||| || |||||| ||||||||||| | Sbjct: 54 gggcgtagcaagcgacgaaatgcttcggggagctgagaacaagcattgatccggagatgc 113 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| ||||| || |||||||||||||| || | ||||||||||||||||| Sbjct: 114 ccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaacctg 173 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 174 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagtagt 233 Query: 182 ggcgagcgaaatgggagcagcctaaaccgt 211 |||||||||||||||| ||||||||||||| Sbjct: 234 ggcgagcgaaatgggaacagcctaaaccgt 263
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 361 bits (182), Expect = 2e-96 Identities = 344/392 (87%), Gaps = 12/392 (3%) Strand = Plus / Plus Query: 304 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 363 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 364 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 423 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 424 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 483 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 484 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 543 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 544 ccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagcga 603 ||||||||||||| | |||||| ||||||||| |||| ||||||||||| |||||| Sbjct: 608 ccggcgactcataagtagtggc-ctggttaagg----ggaa-ccaccggagccatagcga 661 Query: 604 aagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatc 663 |||| |||||| ||||||| | ||||| |||||||| ||||||| | ||||||||||| | Sbjct: 662 aagcaagtcttcatagggcaaatgtcattgcttatgtacccgaa-cttgggtgatctaac 720 Query: 664 catgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||| |||| |||||||||| Sbjct: 721 catgaccaggatgaaatttggttgaaactaag 752 Score = 133 bits (67), Expect = 9e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 103 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 162 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 163 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 222 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 223 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 282 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 283 a 283 | Sbjct: 325 a 325
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 361 bits (182), Expect = 2e-96 Identities = 216/226 (95%), Gaps = 1/226 (0%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 79717 gggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccgaggattc 79658 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||||||||||||||| |||||| |||||||| || ||||||||||||||||||||| Sbjct: 79657 ccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaacctg 79599 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79598 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 79539 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 227 |||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 79538 ggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgg 79493
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 274 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 333 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 334 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 393 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 394 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 453 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 454 gggtagtgaaatagaacgtgaaaccgt 480 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 351 bits (177), Expect = 2e-93 Identities = 180/181 (99%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75819 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 75878 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 75879 ccaaataggtcaaccttttaaactgcctgcggaatccatgagcaggcaagagacaacctg 75938 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75939 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 75998 Query: 182 g 182 | Sbjct: 75999 g 75999 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 449 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ggcgaactgaaacatcttag 140 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 341 bits (172), Expect = 2e-90 Identities = 321/364 (88%), Gaps = 10/364 (2%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttt 568 |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggc-ta 613 Query: 569 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 628 |||||| || || || ||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 614 ggttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgt 668 Query: 629 cactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatga 688 ||||| ||| ||||||||||| |||||||||| ||||| |||||||||||||| | ||| Sbjct: 669 cactgtctatagacccgaaccc-gggtgatctaaccatggccaggatgaagctttggtga 727 Query: 689 aact 692 |||| Sbjct: 728 aact 731 Score = 159 bits (80), Expect = 1e-35 Identities = 167/196 (85%) Strand = Plus / Plus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 73 |||||||| ||| |||| || ||| || |||||| ||||||||||| ||| |||||| || Sbjct: 53 cgacgaaacgctccgggaagctgacaagaagcattgatccggagatccccgaatagggca 112 Query: 74 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 133 |||| || |||| | ||||||| || || | ||||||||||||| ||| |||||| Sbjct: 113 acctcttgaactctccgctgaataaataggcggagcagagacaacctggtgaattgaaac 172 Query: 134 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 173 atcttagtagccagaggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaag 232 Query: 194 gggagcagcctaaacc 209 |||| ||| ||||||| Sbjct: 233 gggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 341 bits (172), Expect = 2e-90 Identities = 321/364 (88%), Gaps = 10/364 (2%) Strand = Plus / Minus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttt 568 |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggc-ta 115049 Query: 569 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 628 |||||| || || || ||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 115048 ggttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgt 114994 Query: 629 cactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatga 688 ||||| ||| ||||||||||| |||||||||| ||||| |||||||||||||| | ||| Sbjct: 114993 cactgtctatagacccgaaccc-gggtgatctaaccatggccaggatgaagctttggtga 114935 Query: 689 aact 692 |||| Sbjct: 114934 aact 114931 Score = 341 bits (172), Expect = 2e-90 Identities = 321/364 (88%), Gaps = 10/364 (2%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttt 568 |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggc-ta 86939 Query: 569 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 628 |||||| || || || ||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 86940 ggttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcga-tgt 86994 Query: 629 cactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatga 688 ||||| ||| ||||||||||| |||||||||| ||||| |||||||||||||| | ||| Sbjct: 86995 cactgtctatagacccgaaccc-gggtgatctaaccatggccaggatgaagctttggtga 87053 Query: 689 aact 692 |||| Sbjct: 87054 aact 87057 Score = 159 bits (80), Expect = 1e-35 Identities = 167/196 (85%) Strand = Plus / Minus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 73 |||||||| ||| |||| || ||| || |||||| ||||||||||| ||| |||||| || Sbjct: 115610 cgacgaaacgctccgggaagctgacaagaagcattgatccggagatccccgaatagggca 115551 Query: 74 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 133 |||| || |||| | ||||||| || || | ||||||||||||| ||| |||||| Sbjct: 115550 acctcttgaactctccgctgaataaataggcggagcagagacaacctggtgaattgaaac 115491 Query: 134 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 115490 atcttagtagccagaggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaag 115431 Query: 194 gggagcagcctaaacc 209 |||| ||| ||||||| Sbjct: 115430 gggaacagtctaaacc 115415 Score = 159 bits (80), Expect = 1e-35 Identities = 167/196 (85%) Strand = Plus / Plus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 73 |||||||| ||| |||| || ||| || |||||| ||||||||||| ||| |||||| || Sbjct: 86378 cgacgaaacgctccgggaagctgacaagaagcattgatccggagatccccgaatagggca 86437 Query: 74 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 133 |||| || |||| | ||||||| || || | ||||||||||||| ||| |||||| Sbjct: 86438 acctcttgaactctccgctgaataaataggcggagcagagacaacctggtgaattgaaac 86497 Query: 134 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 86498 atcttagtagccagaggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaag 86557 Query: 194 gggagcagcctaaacc 209 |||| ||| ||||||| Sbjct: 86558 gggaacagtctaaacc 86573
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 341 bits (172), Expect = 2e-90 Identities = 363/422 (86%), Gaps = 6/422 (1%) Strand = Plus / Plus Query: 274 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 333 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 334 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 393 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 394 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 453 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 454 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 513 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 514 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 573 ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 4665 Query: 574 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 633 |||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4666 agggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactg 4724 Query: 634 cttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaacta 693 ||||||||||||||| |||||||||| ||||| |||||||||||||||| | |||||| Sbjct: 4725 tctatggacccgaaccc-gggtgatctaaccatggccaggatgaagcttgggtaaaacta 4783 Query: 694 ag 695 || Sbjct: 4784 ag 4785 Score = 210 bits (106), Expect = 5e-51 Identities = 182/206 (88%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||||| Sbjct: 4087 gggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggagattc 4146 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||| || |||| || |||||| ||||||||||| || | |||||| |||||| Sbjct: 4147 ccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagagagaacctg 4205 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 | ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 4206 gtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagtagc 4265 Query: 182 ggcgagcgaaatgggagcagcctaaa 207 ||||||||||||||||| |||||||| Sbjct: 4266 ggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 341 bits (172), Expect = 2e-90 Identities = 363/422 (86%), Gaps = 6/422 (1%) Strand = Plus / Plus Query: 274 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 333 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 334 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 393 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 394 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 453 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 454 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 513 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 514 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 573 ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 632 Query: 574 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 633 |||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 634 cttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaacta 693 ||||||||||||||| |||||||||| ||||| |||||||||||||||| | |||||| Sbjct: 692 tctatggacccgaaccc-gggtgatctaaccatggccaggatgaagcttgggtaaaacta 750 Query: 694 ag 695 || Sbjct: 751 ag 752 Score = 202 bits (102), Expect = 1e-48 Identities = 181/206 (87%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||||| Sbjct: 54 gggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggagattc 113 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||| || |||| || |||||| ||||||| ||| || | |||||| |||||| Sbjct: 114 ccgaatggggtaaccccttgtactgcc-gctgaatacataggcggataagagagaacctg 172 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 | ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 173 gtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagtagc 232 Query: 182 ggcgagcgaaatgggagcagcctaaa 207 ||||||||||||||||| |||||||| Sbjct: 233 ggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 341 bits (172), Expect = 2e-90 Identities = 363/422 (86%), Gaps = 6/422 (1%) Strand = Plus / Plus Query: 274 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 333 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 334 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 393 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 394 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 453 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 454 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 513 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 514 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtta 573 ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggtta 632 Query: 574 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 633 |||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 634 cttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaacta 693 ||||||||||||||| |||||||||| ||||| |||||||||||||||| | |||||| Sbjct: 692 tctatggacccgaaccc-gggtgatctaaccatggccaggatgaagcttgggtaaaacta 750 Query: 694 ag 695 || Sbjct: 751 ag 752 Score = 210 bits (106), Expect = 5e-51 Identities = 182/206 (88%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| |||||||||||||||||||||||| ||||| | |||||||||||||||||| Sbjct: 54 gggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggagattc 113 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || ||| || |||| || |||||| ||||||||||| || | |||||| |||||| Sbjct: 114 ccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagagagaacctg 172 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 | ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 173 gtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagtagc 232 Query: 182 ggcgagcgaaatgggagcagcctaaa 207 ||||||||||||||||| |||||||| Sbjct: 233 ggcgagcgaaatgggagaagcctaaa 258
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 319 bits (161), Expect = 7e-84 Identities = 174/177 (98%), Gaps = 1/177 (0%) Strand = Plus / Minus Query: 423 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 482 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 483 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 542 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 543 gccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgta 599 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggc-ttggttaagggaacggaacccaccggagccgta 107875
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 309 bits (156), Expect = 7e-81 Identities = 248/274 (90%), Gaps = 11/274 (4%) Strand = Plus / Plus Query: 422 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 481 |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta 60 Query: 482 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 541 || ||||||||||||||||| || | | ||||||||||||||||||||||||||| Sbjct: 61 ---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatg 116 Query: 542 agccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagc 601 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 117 agccggcgactcataggcagtggctt-ggttaagggaac-----ccaccggagccgtagc 170 Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 171 gaaagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatcta 229 Query: 662 tccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||| |||||||||| Sbjct: 230 tccatgaccaggatgaagcttgggtgaaactaag 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 307 bits (155), Expect = 3e-80 Identities = 217/237 (91%), Gaps = 3/237 (1%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 565 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 729 Score = 248 bits (125), Expect = 2e-62 Identities = 188/209 (89%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 ||||||||||||||||||||||||||||| || ||| || |||||| ||||||||||| | Sbjct: 158 gggcgtagcaagcgacgaaatgcttcgggaagctgagaacaagcattgatccggagatgc 217 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| ||||| || |||||||||||||| || | ||||||||||||||||| Sbjct: 218 ccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaacctg 277 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 278 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagtagt 337 Query: 182 ggcgagcgaaatgggagcagcctaaaccg 210 |||||||||||||||| |||||||||||| Sbjct: 338 ggcgagcgaaatgggaacagcctaaaccg 366 Score = 129 bits (65), Expect = 1e-26 Identities = 93/101 (92%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 648 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 747 ccggagccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaac 806 Query: 649 cctgggtgatctatccatgaccaggatgaagcttggatgaa 689 || |||||||||| ||||| ||||| |||||||||| |||| Sbjct: 807 cc-gggtgatctaaccatggccagggtgaagcttgggtgaa 846
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 301 bits (152), Expect = 2e-78 Identities = 322/374 (86%), Gaps = 6/374 (1%) Strand = Plus / Plus Query: 322 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 381 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 382 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 441 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 442 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 501 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 502 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 561 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 562 tggctttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaataggg 621 |||| | ||||||||||| | ||| |||||| |||||||||| |||||| |||| Sbjct: 617 tggc-tgggttaagggaa-tttatgcactggagccatagcgaaagcaagtcttttcaggg 674 Query: 622 cgattgtcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagct 681 | |||||||||| ||||||||||||||| |||||||||| ||||| ||||||||||||| Sbjct: 675 ctattgtcactgtctatggacccgaaccc-gggtgatctaaccatggccaggatgaagct 733 Query: 682 tggatgaaactaag 695 ||| |||||||||| Sbjct: 734 tgggtgaaactaag 747 Score = 180 bits (91), Expect = 4e-42 Identities = 180/207 (86%), Gaps = 2/207 (0%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||| |||||||||||| ||||| | | ||||||||||||||| Sbjct: 54 gggcgtagtaagcgacgaaacgcttcggggagtcgaaaacagacgtagatccggagattc 113 Query: 62 ccaaataggtcaacct-tttaaactgcctgctgaatccatgagcaggcaagagacaacct 120 || ||| || |||| ||| |||||| ||||||| ||| ||| | |||||||||||| Sbjct: 114 ccgaatggggtaacccctttgtactgcc-gctgaattcataagcggataagagacaacct 172 Query: 121 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 180 || ||||||||||||||||||| ||||||||||||||||||||||||||| || ||||| Sbjct: 173 ggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgatttcctgagtag 232 Query: 181 cggcgagcgaaatgggagcagcctaaa 207 |||||||||||||||||| |||||||| Sbjct: 233 cggcgagcgaaatgggagaagcctaaa 259
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 297 bits (150), Expect = 3e-77 Identities = 312/362 (86%), Gaps = 13/362 (3%) Strand = Plus / Plus Query: 328 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 387 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 388 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 447 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 507 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 508 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 567 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggc-c 572 Query: 568 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 627 |||||||| ||| || ||||||||||||||||| |||| | || |||| || Sbjct: 573 tggttaagagaa-------tactggagccgtagcgaaagcaagtcat-atttggcgcatg 624 Query: 628 tcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatg 687 |||||| |||| ||||||||||| |||||||||||||||| ||||| |||| ||||| || Sbjct: 625 tcactgtttatagacccgaaccc-gggtgatctatccatggccagggtgaaacttgggtg 683 Query: 688 aa 689 || Sbjct: 684 aa 685 Score = 178 bits (90), Expect = 2e-41 Identities = 182/209 (87%), Gaps = 4/209 (1%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggagatt 60 ||||||| |||||||||||||||| |||| |||| || |||| || ||||||||||| Sbjct: 10 gggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggagatc 67 Query: 61 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacct 120 ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| ||||| Sbjct: 68 cccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataacct 126 Query: 121 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 127 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcagtag 186 Query: 181 cggcgagcgaaatgggagcagcctaaacc 209 |||||||||||||||| ||||||||||| Sbjct: 187 tggcgagcgaaatgggaacagcctaaacc 215
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 297 bits (150), Expect = 3e-77 Identities = 305/352 (86%), Gaps = 11/352 (3%) Strand = Plus / Plus Query: 333 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 392 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 393 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 452 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 453 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 512 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 513 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggtt 572 | || ||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-atggtt 620 Query: 573 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 632 ||| |||| |||||| |||| |||||||||| |||||| ||||||||||||||| Sbjct: 621 aag-----ggaatccaccgaagccatagcgaaagcaagtctt-tcagggcgattgtcact 674 Query: 633 gcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 684 | |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 675 gtttatggacccgaaccc-gggtgatctatccatgaccaggatgaagcttgg 725 Score = 182 bits (92), Expect = 1e-42 Identities = 194/228 (85%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| |||||||||||||||||||||| || || ||||||| ||||| |||||| Sbjct: 54 gggcgtagtcagcgacgaaatgcttcggggagctgcgaacaagcataaatccgaagattc 113 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| ||||| || ||| |||| |||| || | |||| ||||| ||||| Sbjct: 114 ccgaatagggtaacctcttgtactacctgtagaattaataatcaggttagagaaaaccta 173 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 | ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 174 gtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattccctcagtagt 233 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 229 ||||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 234 ggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 282 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 340 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 341 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 400 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 401 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 460 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 461 gaaatagaacgtgaaaccgtgctgagctcc 490 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 282 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 340 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 341 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 400 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 401 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 460 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 461 gaaatagaacgtgaaaccgtgctgagctcc 490 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 282 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 340 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 341 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 400 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 401 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 460 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 461 gaaatagaacgtgaaaccgtgctgagctcc 490 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 483 tgagctcccaagcagtgggaggggaaagtgatc 515 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 597 gtagcgaaagcgagtcttaatagggcgattgtcactgctta 637 ||||||||||||| |||||||||| | ||| ||||| |||| Sbjct: 9056636 gtagcgaaagcgactcttaataggacaattttcactactta 9056676
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 282 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 340 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 341 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 400 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 401 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 460 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 461 gaaatagaacgtgaaaccgtgctgagctcc 490 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 483 tgagctcccaagcagtgggaggggaaagtgatc 515 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 597 gtagcgaaagcgagtcttaatagggcgattgtcactgctta 637 ||||||||||||| |||||||||| | ||| ||||| |||| Sbjct: 9128333 gtagcgaaagcgactcttaataggacaattttcactactta 9128373
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 283 bits (143), Expect = 4e-73 Identities = 244/272 (89%), Gaps = 13/272 (4%) Strand = Plus / Plus Query: 424 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 483 |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 1 cgtgagggaagggtgaaaagaaccc--atcggggagtgaaatagaacatgaaaccgta-- 56 Query: 484 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 543 || ||||||||||||||||| || | | ||||||||||||||||||||||||||||| Sbjct: 57 -agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgag 114 Query: 544 ccggcgactcataggcagtggctttggttaagggaacggaacccaccggagccgtagcga 603 |||||||||||||||||||||||| |||||||||||| |||||||||||||||||| Sbjct: 115 ccggcgactcataggcagtggctt-ggttaagggaac-----ccaccggagccgtagcga 168 Query: 604 aagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatctatc 663 ||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 169 aagcgagtcttcatagggcaattgtcactgcttatggacccgaa-cctgggtgatctatc 227 Query: 664 catgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||| |||||||||| Sbjct: 228 catgaccaggatgaagcttgggtgaaactaag 259
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 280 bits (141), Expect = 6e-72 Identities = 158/161 (98%), Gaps = 2/161 (1%) Strand = Plus / Plus Query: 535 aagaatgagccggcgactcataggcagtggctttggttaagggaacggaacccaccggag 594 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggctt-ggttaagggaacggaacccaccggag 60 Query: 595 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctggg 654 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 61 ccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctggg 119 Query: 655 tgatctatccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 tgatctatccatgaccaggatgaagcttggatgaaactaag 160
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 278 bits (140), Expect = 2e-71 Identities = 157/160 (98%), Gaps = 2/160 (1%) Strand = Plus / Plus Query: 536 agaatgagccggcgactcataggcagtggctttggttaagggaacggaacccaccggagc 595 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggctt-ggttaagggaacggaacccaccggagc 59 Query: 596 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggt 655 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 60 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaa-cctgggt 118 Query: 656 gatctatccatgaccaggatgaagcttggatgaaactaag 695 |||||||||||||||||||||||||||||||||||||||| Sbjct: 119 gatctatccatgaccaggatgaagcttggatgaaactaag 158
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 276 bits (139), Expect = 9e-71 Identities = 300/347 (86%), Gaps = 15/347 (4%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttt 568 ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||| || Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc-tt 603 Query: 569 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc---gat 625 |||||||| | | | |||||||| |||||||||||||||| |||||||| || Sbjct: 604 ggttaaggaa----attcatccggagccatagcgaaagcgagtctgaatagggcattaat 659 Query: 626 tgtcactgcttatggacccgaaccctgggtgatctatccatgaccag 672 |||||| |||||||||||||| || || ||||||||||||| |||| Sbjct: 660 ggtcacttcttatggacccgaa-ccgggatgatctatccatggccag 705 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 109 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 168 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 169 ttcccgtagtagcggcgagcgaa 191 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 274 bits (138), Expect = 4e-70 Identities = 308/362 (85%), Gaps = 12/362 (3%) Strand = Plus / Plus Query: 328 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 387 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 388 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 447 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 507 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 508 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 567 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggc-c 1019 Query: 568 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 627 |||||||||| | |||| |||||||||||||||||||| | |||||| || Sbjct: 1020 tggttaagggta-------taccgaagccgtagcgaaagcgagtcattcaagggcgcatg 1072 Query: 628 tcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatg 687 |||||| |||||||||||||||| |||||||||||||||| ||||| |||||||||| || Sbjct: 1073 tcactgtttatggacccgaaccc-gggtgatctatccatggccagggtgaagcttgggtg 1131 Query: 688 aa 689 || Sbjct: 1132 aa 1133 Score = 167 bits (84), Expect = 6e-38 Identities = 142/160 (88%), Gaps = 1/160 (0%) Strand = Plus / Plus Query: 52 ccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaag 111 |||||||||||| |||||| |||||| | ||||||| |||||||| ||| || | ||| Sbjct: 505 ccggagattcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaag 563 Query: 112 agacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattc 171 ||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 564 agacaacctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattc 623 Query: 172 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 211 || |||||| ||||||||||| |||| ||||||||||||| Sbjct: 624 ccttagtagtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 264 bits (133), Expect = 4e-67 Identities = 171/181 (94%), Gaps = 7/181 (3%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 574 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt-ggttaa 120 Query: 575 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 634 |||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 121 gggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 175 Query: 635 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 694 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 176 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 234 Query: 695 g 695 | Sbjct: 235 g 235
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 264 bits (133), Expect = 4e-67 Identities = 171/181 (94%), Gaps = 7/181 (3%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 574 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt-ggttaa 104 Query: 575 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 634 |||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 105 gggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 159 Query: 635 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 694 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 160 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 218 Query: 695 g 695 | Sbjct: 219 g 219
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 260 bits (131), Expect = 5e-66 Identities = 222/248 (89%), Gaps = 7/248 (2%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttt 568 | ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||| || Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc-tt 642 Query: 569 ggttaagg 576 |||||||| Sbjct: 643 ggttaagg 650 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 109 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 168 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 169 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 208 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 258 bits (130), Expect = 2e-65 Identities = 133/134 (99%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434053 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 19433994 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 19433993 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 19433934 Query: 122 gcgaactgaaacat 135 |||||||||||||| Sbjct: 19433933 gcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 7e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 503 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 544 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 421 taccgtgagggaaaggtgaaaagaacc 447 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 258 bits (130), Expect = 2e-65 Identities = 133/134 (99%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51580 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 51521 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 51520 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 51461 Query: 122 gcgaactgaaacat 135 |||||||||||||| Sbjct: 51460 gcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 258 bits (130), Expect = 2e-65 Identities = 133/134 (99%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119544 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 119485 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119484 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 119425 Query: 122 gcgaactgaaacat 135 |||||||||||||| Sbjct: 119424 gcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 258 bits (130), Expect = 2e-65 Identities = 133/134 (99%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6078 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 6137 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 6138 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 6197 Query: 122 gcgaactgaaacat 135 |||||||||||||| Sbjct: 6198 gcgaactgaaacat 6211
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 254 bits (128), Expect = 3e-64 Identities = 131/132 (99%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1598 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 1657 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1658 ccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacctg 1717 Query: 122 gcgaactgaaac 133 |||||||||||| Sbjct: 1718 gcgaactgaaac 1729
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 248 bits (125), Expect = 2e-62 Identities = 214/243 (88%), Gaps = 3/243 (1%) Strand = Plus / Plus Query: 323 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 382 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 383 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 442 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 443 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 502 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 503 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 562 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 563 ggc 565 ||| Sbjct: 575 ggc 577 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 116 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 175 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 176 agtagcggcgagcgaaatgggagcagcctaaacc 209 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 95.6 bits (48), Expect = 2e-16 Identities = 91/104 (87%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 588 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 647 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 648 ccctgggtgatctatccatgaccaggatgaagcttggatgaaac 691 ||| |||||||||||||||| ||||||||||| |||| |||||| Sbjct: 652 ccc-gggtgatctatccatggccaggatgaagtttgggtgaaac 694 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcgg 29 |||||||| ||||||||||| ||||||| Sbjct: 15 gggcgtagtaagcgacgaaacgcttcgg 42
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 248 bits (125), Expect = 2e-62 Identities = 215/239 (89%), Gaps = 12/239 (5%) Strand = Plus / Plus Query: 458 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 517 ||||||||||||| ||||||||| |||||||||||||||||||| | || ||| Sbjct: 364690 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctc 364745 Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaaggg 577 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 364746 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaag-- 364802 Query: 578 aacggaacccaccggagccgtagcgaaa-gcgagtcttaatagggcgattgtcactgctt 636 ||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||| Sbjct: 364803 ---ggaacccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgctt 364859 Query: 637 atggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 ||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 364860 atggacccgaa-cctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 364917 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 11520 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 11475
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 5e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 257 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 316 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 317 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 376 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 377 accttgcaaggctaaatactcctgggtgaccga 409 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 240 bits (121), Expect = 5e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 565 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 110 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 169 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 170 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 91.7 bits (46), Expect = 3e-15 Identities = 83/94 (88%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 591 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 650 |||||| |||||||||||||||| ||||||||| |||| || ||||||||||||||| Sbjct: 650 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 709 Query: 651 tgggtgatctatccatgaccaggatgaagcttgg 684 |||||||||| ||||| |||||||||||||||| Sbjct: 710 -gggtgatctaaccatggccaggatgaagcttgg 742 Score = 63.9 bits (32), Expect = 7e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||| ||||||||||| || ||| |||| | |||||| |||||| Sbjct: 41 gggcgtagtaaccgacgaaacgcttcggggagctggaaacaagctttgatccgtagattc 100 Query: 62 ccaaataggtcaacct 77 || |||||| |||||| Sbjct: 101 ccgaatagggcaacct 116
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 240 bits (121), Expect = 5e-60 Identities = 306/359 (85%), Gaps = 14/359 (3%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 447 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 507 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 508 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 567 | | |||||||||||||||||||||||||||||||||||||| || | |||||| | Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggc-t 588 Query: 568 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc--gat 625 |||||||||| ||| | ||| |||| ||||||||| ||||| |||||||| || Sbjct: 589 tggttaaggg---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaat 644 Query: 626 tgtcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 684 |||||| ||| |||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 645 cgtcactttttagggacccgaaccc-gggtgatctaaccatggccaggatgaagcttgg 702 Score = 123 bits (62), Expect = 8e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 115 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 174 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 175 tagtagcggcgagcgaaatgggagcagcctaaac 208 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 240 bits (121), Expect = 5e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 565 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 110 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 169 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 170 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 91.7 bits (46), Expect = 3e-15 Identities = 83/94 (88%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 591 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 650 |||||| |||||||||||||||| ||||||||| |||| || ||||||||||||||| Sbjct: 2419 ggagccatagcgaaagcgagtctgaatagggcgtatgtccgtgtctatggacccgaaccc 2478 Query: 651 tgggtgatctatccatgaccaggatgaagcttgg 684 |||||||||| ||||| |||||||||||||||| Sbjct: 2479 -gggtgatctaaccatggccaggatgaagcttgg 2511 Score = 63.9 bits (32), Expect = 7e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| || |||||||| ||||||||||| || ||| |||| | |||||| |||||| Sbjct: 1807 gggcgtagtaaccgacgaaacgcttcggggagctggaaacaagctttgatccgtagattc 1866 Query: 62 ccaaataggtcaacct 77 || |||||| |||||| Sbjct: 1867 ccgaatagggcaacct 1882
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 276 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 335 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 336 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 395 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 396 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 455 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 456 gtagtgaaatagaacgtgaaa 476 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 172 bits (87), Expect = 1e-39 Identities = 180/207 (86%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 18 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 77 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 68 gaaatgcttcggggagttaaaaataaacatagatccggagattcccgaataggtaaacct 127 Query: 78 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 137 || |||||| ||||| | |||||| |||| ||| ||| ||||||| |||||||| ||||| Sbjct: 128 ttaaaactg-ctgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatct 184 Query: 138 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 197 |||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| |||| Sbjct: 185 tagtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaaggga 244 Query: 198 gcagcctaaaccgtgaaaacggggttg 224 |||||||||||| |||| ||||||| Sbjct: 245 acagcctaaaccgctaaaatggggttg 271 Score = 143 bits (72), Expect = 9e-31 Identities = 157/181 (86%), Gaps = 7/181 (3%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 574 ||||||| |||| ||||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggc-ttggttaa 624 Query: 575 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 634 || |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| ||| Sbjct: 625 gg----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgc 679 Query: 635 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 694 ||||||||||||| | ||||||||||| ||||||||| |||||| |||| ||||||||| Sbjct: 680 ttatggacccgaa-cttgggtgatctaaccatgaccaagatgaaatttggttgaaactaa 738 Query: 695 g 695 | Sbjct: 739 g 739
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 228 bits (115), Expect = 2e-56 Identities = 198/224 (88%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgact 594 Score = 145 bits (73), Expect = 2e-31 Identities = 166/197 (84%) Strand = Plus / Plus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 73 |||||| | ||| ||||||| || || ||||| | ||||||||||||||| ||| || || Sbjct: 53 cgacgatacgctccggggagctggaagtaagcttcgatccggagattcccgaatggggca 112 Query: 74 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 133 |||| ||| |||||||||| ||| ||||| |||| |||| || |||||||||| Sbjct: 113 acctcaaggactccctgctgaattcataggcagggtagaggaaacccggtgaactgaaac 172 Query: 134 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 173 atcttagtagccggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaac 232 Query: 194 gggagcagcctaaaccg 210 |||| |||||||||||| Sbjct: 233 gggaccagcctaaaccg 249 Score = 87.7 bits (44), Expect = 5e-14 Identities = 90/104 (86%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 588 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 647 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 648 ccctgggtgatctatccatgaccaggatgaagcttggatgaaac 691 ||| |||||||||| ||||| |||||| ||||||||| |||||| Sbjct: 684 ccc-gggtgatctaaccatggccaggaggaagcttgggtgaaac 726
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 224 bits (113), Expect = 3e-55 Identities = 151/161 (93%), Gaps = 2/161 (1%) Strand = Plus / Minus Query: 4 gcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatccggagattcc 62 |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 89827 gcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatccggagattcc 89768 Query: 63 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 122 ||||||| |||||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 89767 ggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctgg 89709 Query: 123 cgaactgaaacatcttagtagccagaggaaaagaaagcaaa 163 ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 89708 cgaactgaaacatcttactagccagaggaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 224 bits (113), Expect = 3e-55 Identities = 151/161 (93%), Gaps = 2/161 (1%) Strand = Plus / Plus Query: 4 gcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatccggagattcc 62 |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 443 gcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatccggagattcc 502 Query: 63 caaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctgg 122 ||||||| |||||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 503 ggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacctgg 561 Query: 123 cgaactgaaacatcttagtagccagaggaaaagaaagcaaa 163 ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 562 cgaactgaaacatcttactagccagaggaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 403 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 224 bits (113), Expect = 3e-55 Identities = 165/181 (91%), Gaps = 6/181 (3%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 574 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 575 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 634 |||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 gggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 635 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 694 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135 ttatggacccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 193 Query: 695 g 695 | Sbjct: 194 g 194
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 222 bits (112), Expect = 1e-54 Identities = 218/250 (87%), Gaps = 10/250 (4%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 506 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 507 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 566 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| | Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggtt 667 Query: 567 ttggttaagg 576 |||||||||| Sbjct: 668 ttggttaagg 677 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 124 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 183 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 184 cgagcgaaatgggagcagcctaaacc 209 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 75.8 bits (38), Expect = 2e-10 Identities = 77/88 (87%), Gaps = 4/88 (4%) Strand = Plus / Plus Query: 588 accggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggaccc 644 ||||||||| ||||||||||||||| ||||||||| || |||||| |||||||||| Sbjct: 685 accggagcccaagcgaaagcgagtctgaatagggcgcttatagtcactttttatggaccc 744 Query: 645 gaaccctgggtgatctatccatgaccag 672 |||||| ||||||||||| ||||||||| Sbjct: 745 gaaccc-gggtgatctattcatgaccag 771
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 6e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 18 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 76 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 77 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 136 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 137 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 196 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 197 agcagcctaa 206 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 471 gtgaaa 476 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 6e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 18 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 76 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 77 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 136 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 137 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 196 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 197 agcagcctaa 206 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 6e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 18 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 76 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 77 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 136 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 137 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 196 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 197 agcagcctaa 206 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 6e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 18 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 76 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 77 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 136 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 137 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 196 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 197 agcagcctaa 206 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||| ||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 6e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 18 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 76 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 77 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 136 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 137 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 196 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 197 agcagcctaa 206 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 6e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 18 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 76 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 77 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 136 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 137 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 196 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 197 ag 198 || Sbjct: 245 ag 246 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 471 gtgaaa 476 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 6e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 18 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 76 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 77 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 136 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 137 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 196 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 197 agcagcctaa 206 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 6e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 18 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 76 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 77 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 136 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 137 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 196 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 197 agcagcctaa 206 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 6e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 18 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 76 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 77 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 136 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 137 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 196 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 197 agcagcctaa 206 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 6e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 18 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 76 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 77 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 136 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 137 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 196 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 197 agcagcctaa 206 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 18 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 76 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 77 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 136 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 137 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 196 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 197 agcagcctaa 206 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 6e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 18 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 76 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 77 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 136 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 137 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 196 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 197 agcagcctaa 206 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 6e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 18 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 76 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 77 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 136 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 137 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 196 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 197 agcagcctaa 206 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 6e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 18 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 76 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 77 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 136 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 137 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 196 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 197 agcagcctaa 206 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 6e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 18 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 76 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 77 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 136 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 137 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 196 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 197 agcagcctaa 206 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 214 bits (108), Expect = 3e-52 Identities = 206/237 (86%), Gaps = 5/237 (2%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 509 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 565 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 109 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 168 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 169 ttcccgtagtagcggcgagcgaaatggga 197 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236 Score = 50.1 bits (25), Expect = 0.010 Identities = 47/53 (88%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 627 gtcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaag 679 |||||| |||||||||||||| ||||| ||||||| |||||| || ||||||| Sbjct: 806 gtcacttcttatggacccgaa-cctggatgatctaaccatgagcatgatgaag 857
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccg 479 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 151 bits (76), Expect = 4e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 73 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 74 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 133 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 134 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 194 gggagcagcctaaacc 209 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 3e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831 Score = 44.1 bits (22), Expect = 0.61 Identities = 71/85 (83%), Gaps = 3/85 (3%) Strand = Plus / Plus Query: 599 agcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaaccctgggtg 656 ||||||||||||||| |||||||| | |||| | |||| |||||||||||| || | Sbjct: 873 agcgaaagcgagtctgaatagggcatataagtcatttcttacggacccgaaccc-ggtcg 931 Query: 657 atctatccatgaccaggatgaagct 681 ||||| ||||| ||||||||||||| Sbjct: 932 atctaaccatgtccaggatgaagct 956
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 5e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 291 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 350 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 351 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 410 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 411 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 470 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 471 gtgaaa 476 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 6e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 18 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 76 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 77 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 136 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 137 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 196 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 197 ag 198 || Sbjct: 245 ag 246 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 515 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 556 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 7e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 105 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 164 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 165 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 209 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 3e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930 Score = 46.1 bits (23), Expect = 0.15 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Plus Query: 634 cttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 684 |||| |||||||||||| || |||||| ||||| |||||||||||||||| Sbjct: 1030 cttacggacccgaaccc-ggtcgatctaaccatgtccaggatgaagcttgg 1079
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 7e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 128 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 187 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 188 cgaaatgggagcagcctaaacc 209 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 516 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 565 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634 Score = 61.9 bits (31), Expect = 3e-06 Identities = 44/47 (93%), Gaps = 1/47 (2%) Strand = Plus / Plus Query: 638 tggacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 684 ||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 712 tggacccgaaccc-gggtgatctaatcatgaccaggatgaagcttgg 757 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 600 gcgaaagcgagtcttaatagggcga 624 |||||||||||||| |||||||||| Sbjct: 665 gcgaaagcgagtctgaatagggcga 689
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 204 bits (103), Expect = 3e-49 Identities = 216/250 (86%), Gaps = 9/250 (3%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 506 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 507 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 566 ||| || |||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggc- 619 Query: 567 ttggttaagg 576 |||||||||| Sbjct: 620 ttggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 124 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 183 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 184 cgagcgaaatgggagcagcctaaacc 209 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/46 (91%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 627 gtcactgcttatggacccgaaccctgggtgatctatccatgaccag 672 |||||| ||||||||||||||||| |||||||||| ||||||||| Sbjct: 683 gtcacttcttatggacccgaaccc-gggtgatctaatcatgaccag 727
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 204 bits (103), Expect = 3e-49 Identities = 216/250 (86%), Gaps = 9/250 (3%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 506 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 507 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 566 ||| || |||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggc- 619 Query: 567 ttggttaagg 576 |||||||||| Sbjct: 620 ttggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 124 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 183 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 184 cgagcgaaatgggagcagcctaaacc 209 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 52.0 bits (26), Expect = 0.002 Identities = 42/46 (91%), Gaps = 1/46 (2%) Strand = Plus / Plus Query: 627 gtcactgcttatggacccgaaccctgggtgatctatccatgaccag 672 |||||| ||||||||||||||||| |||||||||| ||||||||| Sbjct: 683 gtcacttcttatggacccgaaccc-gggtgatctaatcatgaccag 727
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 1e-48 Identities = 117/122 (95%) Strand = Plus / Plus Query: 328 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 387 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 388 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 447 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 448 cc 449 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 107 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 166 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 167 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 91.7 bits (46), Expect = 3e-15 Identities = 56/58 (96%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 519 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 576 |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ttggttaagg 618 Score = 58.0 bits (29), Expect = 4e-05 Identities = 51/57 (89%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 626 tgtcactgcttatggacccgaaccctgggtgatctatccatgaccaggatgaagctt 682 |||||||| ||||||||||||| || | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatcc-gagtgatctaaccatgaccagggtgaagctt 719 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagat 59 ||||||||||||||||||||||| ||| | || |||||||||||| Sbjct: 66 cgacgaaatgcttcggggagttggaaagaggctgagatccggagat 111
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 202 bits (102), Expect = 1e-48 Identities = 198/230 (86%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||| || || ||| ||||||||| |||||| Sbjct: 54 gggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtatagatccgaagattc 113 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||| || ||| |||| ||| ||| | |||| ||||| ||||| Sbjct: 114 ccgaatagggcaacctcttgtactacctgtaaaatacataatcaggttagagaaaaccta 173 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 | ||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||| Sbjct: 174 gtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagtagt 233 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 231 ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 234 ggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 283 Score = 194 bits (98), Expect = 3e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 333 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 392 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 393 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 452 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 453 tgggtagtgaaatagaacgtgaaacc 478 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 178 bits (90), Expect = 2e-41 Identities = 156/174 (89%), Gaps = 8/174 (4%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaaggg 577 ||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcat-ggttaaggg 625 Query: 578 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 637 || |||||| |||| |||||||||| |||||| |||||||||||||||| ||| Sbjct: 626 aat-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgttta 679 Query: 638 tggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaac 691 ||||||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 680 tggacccgaaccc-gggtgatctatccatgaccaggatgaagcttgggtgaaac 732
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 1e-48 Identities = 135/146 (92%) Strand = Plus / Plus Query: 333 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 392 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 393 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 452 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 453 tgggtagtgaaatagaacgtgaaacc 478 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 167 bits (84), Expect = 6e-38 Identities = 192/228 (84%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| ||||||||||||||||||||||| || || ||| ||| ||||| |||||| Sbjct: 1821 gggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtataaatccgaagattc 1880 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| ||||| || ||| |||| |||| || | |||| ||||| ||||| Sbjct: 1881 ccgaatagggtaacctcttgtactacctgtataatcaataatcaggttagagaaaaccta 1940 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 | ||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||| Sbjct: 1941 gtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagtagt 2000 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 229 ||||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 2001 ggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 198 bits (100), Expect = 2e-47 Identities = 209/238 (87%), Gaps = 8/238 (3%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 447 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 507 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 508 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 565 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggc 672 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 109 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 168 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 169 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242 Score = 69.9 bits (35), Expect = 1e-08 Identities = 84/98 (85%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcgattg--tcactgcttatggacccga 646 |||||||| ||||||||| ||||| ||||||||| || ||||| ||||||||||||| Sbjct: 691 ccggagcctaagcgaaagcaagtctgaatagggcgtatgagtcacttcttatggacccga 750 Query: 647 accctgggtgatctatccatgaccaggatgaagcttgg 684 |||| |||||||||| | |||||||||||||| |||| Sbjct: 751 accc-gggtgatctaatcctgaccaggatgaagtttgg 787
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 389 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 447 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 505 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 506 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 565 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 566 tt 567 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 8e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 128 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 187 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 188 cgaa 191 |||| Sbjct: 238 cgaa 241 Score = 71.9 bits (36), Expect = 3e-09 Identities = 76/87 (87%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 600 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaaccctgggtga 657 |||||||||||||| ||||||||| || |||| | | | ||||||||||||| |||||| Sbjct: 667 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaaccc-gggtga 725 Query: 658 tctatccatgaccaggatgaagcttgg 684 |||| ||||||||||||||||||||| Sbjct: 726 tctaatcatgaccaggatgaagcttgg 752
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 128 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 187 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 188 cgaaatgggagcagcctaaacc 209 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 565 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/90 (86%), Gaps = 3/90 (3%) Strand = Plus / Plus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 648 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 649 cctgggtgatctatccatgaccaggatgaa 678 || |||||||||| |||| |||||||||| Sbjct: 878 cc-gggtgatctaatcatggccaggatgaa 906
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 8e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 124 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 183 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 184 cgagcgaaatgggagcagcctaaac 208 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 105 bits (53), Expect = 2e-19 Identities = 88/97 (90%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 647 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 648 ccctgggtgatctatccatgaccaggatgaagcttgg 684 ||| ||||||||||| |||| |||||||||||||||| Sbjct: 708 ccc-gggtgatctattcatggccaggatgaagcttgg 743 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 576 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctagggttaagg 639 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 23 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 77 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 124 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 183 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 184 cgagcgaaatgggagcagcctaaacc 209 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 97.6 bits (49), Expect = 5e-17 Identities = 88/99 (88%), Gaps = 4/99 (4%) Strand = Plus / Plus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 645 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccg 760 Query: 646 aaccctgggtgatctatccatgaccaggatgaagcttgg 684 ||||| ||||||||||| |||| |||||||||||||||| Sbjct: 761 aaccc-gggtgatctattcatggccaggatgaagcttgg 798 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 566 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 683 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 23 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 77 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 2e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 128 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 187 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 188 cgaaatgggagcagcctaaacc 209 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaa 574 |||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggcattggttaa 650 Score = 56.0 bits (28), Expect = 2e-04 Identities = 75/89 (84%), Gaps = 5/89 (5%) Strand = Plus / Plus Query: 600 gcgaaagcgagtcttaatagggcg----attgtcactgcttatggacccgaaccctgggt 655 |||||||||||||| || |||||| |||||||| ||| ||||||||||||| ||| Sbjct: 673 gcgaaagcgagtctgaaaagggcgtttatttgtcacttcttctggacccgaaccc-aggt 731 Query: 656 gatctatccatgaccaggatgaagcttgg 684 |||||| |||||||||| |||||||||| Sbjct: 732 gatctaaccatgaccagattgaagcttgg 760
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 389 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 447 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 505 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 506 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 565 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616 Query: 566 tt 567 || Sbjct: 617 tt 618 Score = 103 bits (52), Expect = 8e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 128 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 187 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 188 cgaa 191 |||| Sbjct: 219 cgaa 222 Score = 71.9 bits (36), Expect = 3e-09 Identities = 76/87 (87%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 600 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaaccctgggtga 657 |||||||||||||| ||||||||| || |||| | | | ||||||||||||| |||||| Sbjct: 648 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaaccc-gggtga 706 Query: 658 tctatccatgaccaggatgaagcttgg 684 |||| ||||||||||||||||||||| Sbjct: 707 tctaatcatgaccaggatgaagcttgg 733
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 124 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 183 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 184 cgagcgaaatgggagcagcctaaacc 209 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 124 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 183 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 184 cgagcgaaatgggagcagcctaaacc 209 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 97.6 bits (49), Expect = 5e-17 Identities = 88/99 (88%), Gaps = 4/99 (4%) Strand = Plus / Minus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 645 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 151740 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 151681 Query: 646 aaccctgggtgatctatccatgaccaggatgaagcttgg 684 ||||| ||||||||||| |||| |||||||||||||||| Sbjct: 151680 aaccc-gggtgatctattcatggccaggatgaagcttgg 151643 Score = 97.6 bits (49), Expect = 5e-17 Identities = 88/99 (88%), Gaps = 4/99 (4%) Strand = Plus / Plus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 645 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 42463 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 42522 Query: 646 aaccctgggtgatctatccatgaccaggatgaagcttgg 684 ||||| ||||||||||| |||| |||||||||||||||| Sbjct: 42523 aaccc-gggtgatctattcatggccaggatgaagcttgg 42560 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Minus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 566 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 151758 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 566 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 42445
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 389 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 447 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 505 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 506 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 565 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 566 tt 567 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 8e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 128 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 187 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 188 cgaa 191 |||| Sbjct: 238 cgaa 241 Score = 71.9 bits (36), Expect = 3e-09 Identities = 76/87 (87%), Gaps = 3/87 (3%) Strand = Plus / Plus Query: 600 gcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaaccctgggtga 657 |||||||||||||| ||||||||| || |||| | | | ||||||||||||| |||||| Sbjct: 667 gcgaaagcgagtctgaatagggcgtttaagtcatttcctctggacccgaaccc-gggtga 725 Query: 658 tctatccatgaccaggatgaagcttgg 684 |||| ||||||||||||||||||||| Sbjct: 726 tctaatcatgaccaggatgaagcttgg 752
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 124 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 183 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 184 cgagcgaaatgggagcagcctaaacc 209 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 97.6 bits (49), Expect = 5e-17 Identities = 88/99 (88%), Gaps = 4/99 (4%) Strand = Plus / Plus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 645 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcgtaaatggtcacttcttatggacccg 760 Query: 646 aaccctgggtgatctatccatgaccaggatgaagcttgg 684 ||||| ||||||||||| |||| |||||||||||||||| Sbjct: 761 aaccc-gggtgatctattcatggccaggatgaagcttgg 798 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 566 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 683 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 23 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 77 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 8e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 124 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 183 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 184 cgagcgaaatgggagcagcctaaac 208 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 105 bits (53), Expect = 2e-19 Identities = 88/97 (90%), Gaps = 2/97 (2%) Strand = Plus / Plus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 647 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 648 ccctgggtgatctatccatgaccaggatgaagcttgg 684 ||| ||||||||||| |||| |||||||||||||||| Sbjct: 708 ccc-gggtgatctattcatggccaggatgaagcttgg 743 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 576 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctagggttaagg 639 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 23 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 77 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 124 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 183 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 184 cgagcgaaatgggagcagcctaaacc 209 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 97.6 bits (49), Expect = 5e-17 Identities = 88/99 (88%), Gaps = 4/99 (4%) Strand = Plus / Plus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 645 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 635 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 694 Query: 646 aaccctgggtgatctatccatgaccaggatgaagcttgg 684 ||||| ||||||||||| |||| |||||||||||||||| Sbjct: 695 aaccc-gggtgatctattcatggccaggatgaagcttgg 732 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 566 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 617
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 124 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 183 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 184 cgagcgaaatgggagcagcctaaacc 209 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 566 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggct 702 Score = 77.8 bits (39), Expect = 4e-11 Identities = 85/97 (87%), Gaps = 5/97 (5%) Strand = Plus / Plus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 645 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 720 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 779 Query: 646 aaccctgggtgatctatccatgaccaggatgaagctt 682 ||||| ||||||||||| |||| || ||||||||||| Sbjct: 780 aaccc-gggtgatctattcatggcc-ggatgaagctt 814
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 196 bits (99), Expect = 7e-47 Identities = 206/239 (86%), Gaps = 12/239 (5%) Strand = Plus / Minus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 447 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 448 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 506 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 507 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 565 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 155605 Score = 196 bits (99), Expect = 7e-47 Identities = 206/239 (86%), Gaps = 12/239 (5%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 447 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 448 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 506 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 507 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 565 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 78287 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 109 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 168 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 169 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 209 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 109 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 168 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 169 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 209 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 77.8 bits (39), Expect = 4e-11 Identities = 85/98 (86%), Gaps = 3/98 (3%) Strand = Plus / Minus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcgat--tgtcactgcttatggacccga 646 |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 155586 ccggagcccaagcgaaagcgagtctgaatagggcgatacagtcacttcttatggacccga 155527 Query: 647 accctgggtgatctatccatgaccaggatgaagcttgg 684 | ||||| ||||||| |||| ||||| |||||||||| Sbjct: 155526 a-cctggatgatctaatcatggccaggttgaagcttgg 155490 Score = 77.8 bits (39), Expect = 4e-11 Identities = 85/98 (86%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcgat--tgtcactgcttatggacccga 646 |||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct: 78306 ccggagcccaagcgaaagcgagtctgaatagggcgatacagtcacttcttatggacccga 78365 Query: 647 accctgggtgatctatccatgaccaggatgaagcttgg 684 | ||||| ||||||| |||| ||||| |||||||||| Sbjct: 78366 a-cctggatgatctaatcatggccaggttgaagcttgg 78402 Score = 42.1 bits (21), Expect = 2.4 Identities = 51/61 (83%) Strand = Plus / Minus Query: 23 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 82 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 156227 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 156168 Query: 83 a 83 | Sbjct: 156167 a 156167 Score = 42.1 bits (21), Expect = 2.4 Identities = 51/61 (83%) Strand = Plus / Plus Query: 23 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 82 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 77665 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 77724 Query: 83 a 83 | Sbjct: 77725 a 77725
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 7e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 332 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 391 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 392 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 451 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 452 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 511 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 512 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 560 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226 Score = 69.9 bits (35), Expect = 1e-08 Identities = 72/83 (86%), Gaps = 1/83 (1%) Strand = Plus / Plus Query: 602 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgatcta 661 |||| ||||||| || |||||||| ||| || |||| |||||||||||||| ||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctgg-tgatcta 320 Query: 662 tccatgaccaggatgaagcttgg 684 ||||| |||||||||||||||| Sbjct: 321 accatggccaggatgaagcttgg 343
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 3e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 449 ccagtgggtagtgaaatagaacgtgaaacc 478 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 124 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 183 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 184 cgagcgaaatgggagcagcctaaacc 209 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 71.9 bits (36), Expect = 3e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 69.9 bits (35), Expect = 1e-08 Identities = 84/98 (85%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 646 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 647 accctgggtgatctatccatgaccaggatgaagcttgg 684 |||| |||||||||| |||||||||||||||||||||| Sbjct: 681 accc-gggtgatctaaccatgaccaggatgaagcttgg 717 Score = 63.9 bits (32), Expect = 7e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 73 |||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggca 104 Query: 74 acct 77 |||| Sbjct: 105 acct 108
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 3e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 437 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 496 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 497 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 546 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 3e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 333 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 392 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 393 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 452 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 453 tgggtagtgaaatagaacgtgaaacc 478 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 186 bits (94), Expect = 7e-44 Identities = 196/230 (85%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 |||||||| |||||||||||||||| |||||| || || ||| ||||||||| |||||| Sbjct: 3088 gggcgtagtaagcgacgaaatgctttggggagctgcgaacaagtatagatccgaagattc 3147 Query: 62 ccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctg 121 || |||||| |||||| || ||| |||| ||| ||| |||| ||||| ||||| Sbjct: 3148 ccgaatagggcaacctcttgtactacctgtaaaatacatagtcaggttagagaaaaccta 3207 Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 | ||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||| Sbjct: 3208 gtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagtagt 3267 Query: 182 ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 231 ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 3268 ggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 3317 Score = 178 bits (90), Expect = 2e-41 Identities = 156/174 (89%), Gaps = 8/174 (4%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaaggg 577 ||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcat-ggttaaggg 3659 Query: 578 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 637 || |||||| |||| |||||||||| |||||| |||||||||||||||| ||| Sbjct: 3660 aat-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgttta 3713 Query: 638 tggacccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaac 691 ||||||||||||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 3714 tggacccgaaccc-gggtgatctatccatgaccaggatgaagcttgggtgaaac 3766
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 3e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 449 ccagtgggtagtgaaatagaacgtgaaacc 478 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 124 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 183 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 184 cgagcgaaatgggagcagcctaaacc 209 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 3e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 69.9 bits (35), Expect = 1e-08 Identities = 84/98 (85%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 646 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 647 accctgggtgatctatccatgaccaggatgaagcttgg 684 |||| |||||||||| |||||||||||||||||||||| Sbjct: 25490 accc-gggtgatctaaccatgaccaggatgaagcttgg 25526 Score = 63.9 bits (32), Expect = 7e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 73 |||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| || Sbjct: 24854 cgacgaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggca 24913 Query: 74 acct 77 |||| Sbjct: 24914 acct 24917
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 1e-45 Identities = 136/149 (91%) Strand = Plus / Plus Query: 332 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 391 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 392 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 451 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 452 gtgggtagtgaaatagaacgtgaaaccgt 480 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 71.9 bits (36), Expect = 3e-09 Identities = 82/96 (85%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 648 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 649 cctgggtgatctatccatgaccaggatgaagcttgg 684 || |||||||||| ||||| |||||||||||||||| Sbjct: 309 cc-gggtgatctaaccatgtccaggatgaagcttgg 343 Score = 60.0 bits (30), Expect = 1e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 525 gtgcctgttgaagaatgagccggcgactcatagg 558 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 1e-45 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 447 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 507 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 508 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 552 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 109 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 168 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 169 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 124 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 183 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 184 cgagcgaaatgggagcagcctaaacc 209 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 105 bits (53), Expect = 2e-19 Identities = 89/99 (89%), Gaps = 4/99 (4%) Strand = Plus / Plus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 645 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 646 aaccctgggtgatctatccatgaccaggatgaagcttgg 684 ||||| ||||||||||| ||||||||||||||||||||| Sbjct: 704 aaccc-gggtgatctattcatgaccaggatgaagcttgg 741 Score = 79.8 bits (40), Expect = 1e-11 Identities = 46/48 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 565 ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 625 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 23 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 77 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 124 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 183 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 184 cgagcgaaatgggagcagcctaaacc 209 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 101 bits (51), Expect = 3e-18 Identities = 85/94 (90%), Gaps = 3/94 (3%) Strand = Plus / Plus Query: 593 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaaccc 650 |||| |||||||||||||||| ||||||||| | |||||| ||||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 651 tgggtgatctatccatgaccaggatgaagcttgg 684 |||||||||| |||||||||||||||||||||| Sbjct: 716 -gggtgatctaaccatgaccaggatgaagcttgg 748 Score = 73.8 bits (37), Expect = 7e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 566 |||| |||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 634
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 188 bits (95), Expect = 2e-44 Identities = 111/115 (96%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 581 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 640 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 641 acccgaaccctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 695 ||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 65 acccgaa-cctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 118
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 7e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 504 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 7e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 504 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 110 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 169 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 170 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 110 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 169 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 170 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 79.8 bits (40), Expect = 1e-11 Identities = 56/60 (93%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 576 |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggc-ttggttaagg 170883 Score = 79.8 bits (40), Expect = 1e-11 Identities = 56/60 (93%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 576 |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggc-ttggttaagg 122043 Score = 71.9 bits (36), Expect = 3e-09 Identities = 82/96 (85%), Gaps = 1/96 (1%) Strand = Plus / Minus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 648 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 170874 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 170815 Query: 649 cctgggtgatctatccatgaccaggatgaagcttgg 684 || |||||||||| |||||||||||||||||||||| Sbjct: 170814 cc-gggtgatctaaccatgaccaggatgaagcttgg 170780 Score = 71.9 bits (36), Expect = 3e-09 Identities = 82/96 (85%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 648 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 122052 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 122111 Query: 649 cctgggtgatctatccatgaccaggatgaagcttgg 684 || |||||||||| |||||||||||||||||||||| Sbjct: 122112 cc-gggtgatctaaccatgaccaggatgaagcttgg 122146 Score = 48.1 bits (24), Expect = 0.039 Identities = 63/76 (82%) Strand = Plus / Minus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 ||||||||||| |||||||| || ||||||| || || |||| ||||||||||||| Sbjct: 171465 gggcgtagcaaccgacgaaaccctccggggagctggaagcaagctctgatccggagattc 171406 Query: 62 ccaaataggtcaacct 77 || |||||| |||||| Sbjct: 171405 ccgaatagggcaacct 171390 Score = 48.1 bits (24), Expect = 0.039 Identities = 63/76 (82%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 ||||||||||| |||||||| || ||||||| || || |||| ||||||||||||| Sbjct: 121461 gggcgtagcaaccgacgaaaccctccggggagctggaagcaagctctgatccggagattc 121520 Query: 62 ccaaataggtcaacct 77 || |||||| |||||| Sbjct: 121521 ccgaatagggcaacct 121536
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 186 bits (94), Expect = 7e-44 Identities = 205/238 (86%), Gaps = 8/238 (3%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 508 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 509 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 565 ||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 797 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 110 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 169 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 170 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 209 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239 Score = 89.7 bits (45), Expect = 1e-14 Identities = 88/101 (87%), Gaps = 6/101 (5%) Strand = Plus / Plus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 643 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 644 cgaaccctgggtgatctatccatgaccaggatgaagcttgg 684 ||||||| |||||||||| ||||||||||||||||||||| Sbjct: 876 cgaaccc-gggtgatctaatcatgaccaggatgaagcttgg 915
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 7e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 504 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 110 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 169 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 170 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 79.8 bits (40), Expect = 1e-11 Identities = 56/60 (93%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 576 |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggc-ttggttaagg 634 Score = 71.9 bits (36), Expect = 3e-09 Identities = 82/96 (85%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 589 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 648 |||||||| ||||||||||||||| | ||||| ||||||| | || ||||||||| Sbjct: 643 ccggagccagagcgaaagcgagtctgataagggcctgtgtcacttcctagagacccgaac 702 Query: 649 cctgggtgatctatccatgaccaggatgaagcttgg 684 || |||||||||| |||||||||||||||||||||| Sbjct: 703 cc-gggtgatctaaccatgaccaggatgaagcttgg 737 Score = 48.1 bits (24), Expect = 0.039 Identities = 63/76 (82%) Strand = Plus / Plus Query: 2 gggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagattc 61 ||||||||||| |||||||| || ||||||| || || |||| ||||||||||||| Sbjct: 52 gggcgtagcaaccgacgaaaccctccggggagctggaagcaagctctgatccggagattc 111 Query: 62 ccaaataggtcaacct 77 || |||||| |||||| Sbjct: 112 ccgaatagggcaacct 127
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 3e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 447 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 448 cccagtgggtagtgaaatagaacgtgaaaccgt 480 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 139 bits (70), Expect = 1e-29 Identities = 148/170 (87%), Gaps = 8/170 (4%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaagg 576 |||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggctt-ggttaagg 687 Query: 577 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgc 634 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| Sbjct: 688 a----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcacttt 743 Query: 635 ttatggacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 684 |||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 744 ttatggacccgaaccc-gggtgatctaaccatgaccaggatgaagcttgg 792 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 109 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 168 |||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 169 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 1e-42 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 447 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 448 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 504 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 505 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 558 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 113 bits (57), Expect = 8e-22 Identities = 160/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 17 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 76 ||||| ||||||||||| || || |||||| |||||| |||| ||| |||||| ||||| Sbjct: 49 cgaaacgcttcggggagctggcaacaagcatcgatccgaagatccccgaatagggcaacc 108 Query: 77 tttta-aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 135 | ||| ||||||| |||||| ||| | || |||| |||| ||||| |||||||| Sbjct: 109 tcttagaactgcccactgaattcataggtgggtcagaggcaactcagcgaattgaaacat 168 Query: 136 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 195 ||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 169 cttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagcggcgagcggaatgg 228 Query: 196 gagcagcctaaac 208 || |||||||||| Sbjct: 229 gaacagcctaaac 241 Score = 81.8 bits (41), Expect = 3e-12 Identities = 78/88 (88%), Gaps = 3/88 (3%) Strand = Plus / Plus Query: 599 agcgaaagcgagtcttaatagggcgat--tgtcactgcttatggacccgaaccctgggtg 656 ||||||||||||||| ||||||||| | ||||| | |||||||||||||||| ||| || Sbjct: 643 agcgaaagcgagtctgaatagggcgctaatgtcatttcttatggacccgaacc-tggatg 701 Query: 657 atctatccatgaccaggatgaagcttgg 684 ||||| ||||| |||||||||||||||| Sbjct: 702 atctaaccatggccaggatgaagcttgg 729
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 1e-42 Identities = 137/152 (90%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgt 480 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 153 bits (77), Expect = 9e-34 Identities = 167/197 (84%) Strand = Plus / Plus Query: 14 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 73 |||||| | ||||||||||| || || |||| | |||||| |||||||| |||||| || Sbjct: 53 cgacgatacgcttcggggagctggaatcaagctttgatccgaagattcccgaatagggca 112 Query: 74 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 133 ||||| || ||| |||| ||||| ||| |||| ||||||||||| |||||| |||||| Sbjct: 113 accttatatacttcctgttgaattcatagacaggtaagagacaacccggcgaattgaaac 172 Query: 134 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 193 |||||||||||| | ||||||||||||||| ||||||||| |||||| ||||||||||| Sbjct: 173 atcttagtagccggtggaaaagaaagcaaacgcgattcccttagtagtggcgagcgaaaa 232 Query: 194 gggagcagcctaaaccg 210 |||| ||| |||||||| Sbjct: 233 gggatcagtctaaaccg 249 Score = 109 bits (55), Expect = 1e-20 Identities = 86/95 (90%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 588 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 647 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 648 ccctgggtgatctatccatgaccaggatgaagctt 682 ||| |||||||||| |||||||||||||||||||| Sbjct: 682 ccc-gggtgatctaaccatgaccaggatgaagctt 715 Score = 97.6 bits (49), Expect = 5e-17 Identities = 59/61 (96%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 516 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaag 575 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc-ttggttaag 614 Query: 576 g 576 | Sbjct: 615 g 615
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 2e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 449 ccagtgggtagtgaaatagaacgtgaaacc 478 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 97.6 bits (49), Expect = 5e-17 Identities = 79/87 (90%), Gaps = 4/87 (4%) Strand = Plus / Plus Query: 599 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaaccctgggt 655 ||||||||||||||||||||||||| || |||||| ||||||||||||||||| |||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggacccgaaccc-gggt 717 Query: 656 gatctatccatgaccaggatgaagctt 682 ||||||| |||||||||| |||||||| Sbjct: 718 gatctattcatgaccaggttgaagctt 744 Score = 93.7 bits (47), Expect = 7e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 23 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 82 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 83 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 142 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 143 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 202 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 203 ctaaacc 209 ||||||| Sbjct: 253 ctaaacc 259 Score = 83.8 bits (42), Expect = 7e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 566 |||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 631
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 2e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 449 ccagtgggtagtgaaatagaacgtgaaacc 478 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 124 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 183 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 184 cgagcgaaatgggagcagcctaaacc 209 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 65.9 bits (33), Expect = 2e-07 Identities = 43/45 (95%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 640 gacccgaaccctgggtgatctatccatgaccaggatgaagcttgg 684 ||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 547 gacccgaaccc-gggtgatctaaccatgaccaggatgaagcttgg 590 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgact 552 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 2e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 449 ccagtgggtagtgaaatagaacgtgaaacc 478 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 97.6 bits (49), Expect = 5e-17 Identities = 79/87 (90%), Gaps = 4/87 (4%) Strand = Plus / Plus Query: 599 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaaccctgggt 655 ||||||||||||||||||||||||| || |||||| ||||||||||||||||| |||| Sbjct: 659 agcgaaagcgagtcttaatagggcgtaaatggtcacttcttatggacccgaaccc-gggt 717 Query: 656 gatctatccatgaccaggatgaagctt 682 ||||||| |||||||||| |||||||| Sbjct: 718 gatctattcatgaccaggttgaagctt 744 Score = 93.7 bits (47), Expect = 7e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 23 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 82 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 83 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 142 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 143 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 202 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 203 ctaaacc 209 ||||||| Sbjct: 253 ctaaacc 259 Score = 83.8 bits (42), Expect = 7e-13 Identities = 48/50 (96%) Strand = Plus / Plus Query: 517 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 566 |||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 631
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 332 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 391 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 392 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 451 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 452 gtgggtagtgaaatagaacgtgaaaccgt 480 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 83.8 bits (42), Expect = 7e-13 Identities = 76/86 (88%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 599 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccctgggtgat 658 |||||||||||||| |||||||||||| ||||| || | ||||||||||| ||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaaccc-gggtgat 320 Query: 659 ctatccatgaccaggatgaagcttgg 684 ||| ||||| |||||||||||||||| Sbjct: 321 ctaaccatgtccaggatgaagcttgg 346 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 516 tctgaccgcgtgcctgttgaagaatgagccggcga 550 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 6e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 449 ccagt-gggtagtgaaatagaacgtgaaaccgt 480 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 6e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 109 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 168 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 169 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 210 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 103 bits (52), Expect = 8e-19 Identities = 139/165 (84%), Gaps = 6/165 (3%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctttggttaaggg 577 ||||||| ||||||||||||||||||||||||||| ||| |||||||| |||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggctt-ggttaagga 772 Query: 578 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 637 || | || |||||| ||||||||| |||||||||||||| |||||| ||| Sbjct: 773 aaaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactcttta 828 Query: 638 tggacccgaaccctgggtgatctatccatgaccaggatgaagctt 682 ||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 829 tggacccgaaccc-gggtgatctaaccatgaccaggatgaagctt 872
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 329 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 388 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 389 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 448 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 449 ccagtgggtagtgaaatagaacgtgaaaccgtg 481 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 99.6 bits (50), Expect = 1e-17 Identities = 84/94 (89%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 591 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaaccc 650 |||||| |||||||||||||||| ||||||||| |||||| | |||| ||||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 651 tgggtgatctatccatgaccaggatgaagcttgg 684 |||||||||| ||||| |||||||||||||||| Sbjct: 532 -gggtgatctaaccatggccaggatgaagcttgg 564 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 122 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 181 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 182 ggcgagcgaaatgggagcagcctaaacc 209 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 518 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 558 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,677,427 Number of Sequences: 3902068 Number of extensions: 4677427 Number of successful extensions: 133806 Number of sequences better than 10.0: 26664 Number of HSP's better than 10.0 without gapping: 26493 Number of HSP's successfully gapped in prelim test: 206 Number of HSP's that attempted gapping in prelim test: 85125 Number of HSP's gapped (non-prelim): 46098 length of query: 695 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 672 effective length of database: 17,143,297,704 effective search space: 11520296057088 effective search space used: 11520296057088 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
