ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd22a14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469113.1| Oryza sativa (japonica cultivar-group), mRNA 264 2e-67
2dbj|AK111718.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 2e-67
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 168 1e-38
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
5gb|AC135600.3| Oryza sativa chromosome 3 BAC OSJNBb0047K21 genom... 168 1e-38
6dbj|AK111930.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
7gb|AC097529.2| Homo sapiens BAC clone RP11-669F3 from 4, complet... 44 0.39
8emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome 42 1.5
9gb|AC097721.3| Homo sapiens BAC clone RP11-36O6 from 2, complete... 42 1.5
10gb|AC124536.4| Mus musculus BAC clone RP23-332H4 from chromosome... 40 6.1
11gb|AC102092.7| Mus musculus chromosome 3, clone RP23-20B1, compl... 40 6.1
12emb|AL139351.37| Human DNA sequence from clone RP11-321P16 on ch... 40 6.1
13emb|AL096794.3|HSDJ454N4 Human DNA sequence from clone RP3-454N4... 40 6.1
14emb|BX842641.1| Neurospora crassa DNA linkage group I BAC contig... 40 6.1
15emb|BX842595.1| Neurospora crassa DNA linkage group II BAC clone... 40 6.1
16gb|AC090630.10| Homo sapiens 12 BAC RP11-630C16 (Roswell Park Ca... 40 6.1
17gb|AC023688.4| Drosophila melanogaster X BAC RP98-42F7 (Roswell ... 40 6.1
18gb|AC087664.5| Homo sapiens chromosome 8, clone RP11-379I19, com... 40 6.1
19gb|AC011118.13| Homo sapiens chromosome 8, clone RP11-163D8, com... 40 6.1
20gb|AC023690.3| Drosophila melanogaster X BAC RP98-6M20 (Roswell ... 40 6.1
21gb|AC090687.6| Homo sapiens chromosome 8, clone RP11-468A19, com... 40 6.1
22dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
23emb|BX842600.1| Neurospora crassa DNA linkage group II BAC clone... 40 6.1
24gb|AE003488.3| Drosophila melanogaster chromosome X, section 40 ... 40 6.1
25gb|AC006197.1|AC006197 Homo sapiens, clone hRPK.2_A_1, complete ... 40 6.1
26gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
27emb|AL928744.3|CNS08CBH Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.1
28emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.1
29gb|AC116954.4| Mus musculus BAC clone RP23-387L22 from 1, comple... 40 6.1 
>ref|XM_469113.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2094

 Score =  264 bits (133), Expect = 2e-67
 Identities = 280/329 (85%)
 Strand = Plus / Plus

                                                                        
Query: 54   tcctgttgatggcatcctatctgcacttgccccagctgcatctgtgagtgaagttgatga 113
            |||| |||||||||| | ||| || |||||||||||||||||||||||||  ||||| ||
Sbjct: 720  tcctattgatggcattccatcagctcttgccccagctgcatctgtgagtgttgttgacga 779

                                                                        
Query: 114  cttaccagcagaactccactgccaactatgtaataaggtgatggcagatgcggttttaac 173
            ||| ||||| || ||||| ||||  ||||||||||| ||||||||||||||||| || ||
Sbjct: 780  cttgccagctgagctccattgccggctatgtaataaagtgatggcagatgcggtgttgac 839

                                                                        
Query: 174  aagcaagtgctgcttcgtcagtttctgtgataaatgtattcgagattacattattacaca 233
            ||||||||||||||||| |||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 840  aagcaagtgctgcttcgacagtttctgtgataaatgcattcgtgattacatcattacaca 899

                                                                        
Query: 234  atcgaagtgcatttgtggagtgaaggtacttgcagattccctcatcccaaatcccacagt 293
            ||| ||||||||||||||||| ||||| |||||||||  ||| || || || |  ||| |
Sbjct: 900  atccaagtgcatttgtggagtcaaggttcttgcagatgacctgattcccaaccaaacact 959

                                                                        
Query: 294  tagaagcacaatcagcaatttgttaggaacaaggacttgcagcactgccagcggtacagg 353
            | | ||||||||||||||| || | | ||||||| || ||||||   | || ||||||||
Sbjct: 960  tcggagcacaatcagcaatatgctggcaacaagggctagcagcatcactagtggtacagg 1019

                                         
Query: 354  gaagcacagaagttcttcaggaagcaacg 382
            ||||||||| || |||||||| |||||||
Sbjct: 1020 gaagcacaggagctcttcaggcagcaacg 1048
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>dbj|AK111718.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021J03, full
            insert sequence
          Length = 2874

 Score =  264 bits (133), Expect = 2e-67
 Identities = 280/329 (85%)
 Strand = Plus / Plus

                                                                        
Query: 54   tcctgttgatggcatcctatctgcacttgccccagctgcatctgtgagtgaagttgatga 113
            |||| |||||||||| | ||| || |||||||||||||||||||||||||  ||||| ||
Sbjct: 1224 tcctattgatggcattccatcagctcttgccccagctgcatctgtgagtgttgttgacga 1283

                                                                        
Query: 114  cttaccagcagaactccactgccaactatgtaataaggtgatggcagatgcggttttaac 173
            ||| ||||| || ||||| ||||  ||||||||||| ||||||||||||||||| || ||
Sbjct: 1284 cttgccagctgagctccattgccggctatgtaataaagtgatggcagatgcggtgttgac 1343

                                                                        
Query: 174  aagcaagtgctgcttcgtcagtttctgtgataaatgtattcgagattacattattacaca 233
            ||||||||||||||||| |||||||||||||||||| ||||| |||||||| ||||||||
Sbjct: 1344 aagcaagtgctgcttcgacagtttctgtgataaatgcattcgtgattacatcattacaca 1403

                                                                        
Query: 234  atcgaagtgcatttgtggagtgaaggtacttgcagattccctcatcccaaatcccacagt 293
            ||| ||||||||||||||||| ||||| |||||||||  ||| || || || |  ||| |
Sbjct: 1404 atccaagtgcatttgtggagtcaaggttcttgcagatgacctgattcccaaccaaacact 1463

                                                                        
Query: 294  tagaagcacaatcagcaatttgttaggaacaaggacttgcagcactgccagcggtacagg 353
            | | ||||||||||||||| || | | ||||||| || ||||||   | || ||||||||
Sbjct: 1464 tcggagcacaatcagcaatatgctggcaacaagggctagcagcatcactagtggtacagg 1523

                                         
Query: 354  gaagcacagaagttcttcaggaagcaacg 382
            ||||||||| || |||||||| |||||||
Sbjct: 1524 gaagcacaggagctcttcaggcagcaacg 1552
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  168 bits (85), Expect = 1e-38
 Identities = 139/157 (88%)
 Strand = Plus / Minus

                                                                            
Query: 54       tcctgttgatggcatcctatctgcacttgccccagctgcatctgtgagtgaagttgatga 113
                |||| |||||||||| | ||| || |||||||||||||||||||||||||  ||||| ||
Sbjct: 25521200 tcctattgatggcattccatcagctcttgccccagctgcatctgtgagtgttgttgacga 25521141

                                                                            
Query: 114      cttaccagcagaactccactgccaactatgtaataaggtgatggcagatgcggttttaac 173
                ||| ||||| || ||||| ||||  ||||||||||| ||||||||||||||||| || ||
Sbjct: 25521140 cttgccagctgagctccattgccggctatgtaataaagtgatggcagatgcggtgttgac 25521081

                                                     
Query: 174      aagcaagtgctgcttcgtcagtttctgtgataaatgt 210
                ||||||||||||||||| |||||||||||||||||||
Sbjct: 25521080 aagcaagtgctgcttcgacagtttctgtgataaatgt 25521044



 Score =  103 bits (52), Expect = 5e-19
 Identities = 142/172 (82%)
 Strand = Plus / Minus

                                                                            
Query: 211      attcgagattacattattacacaatcgaagtgcatttgtggagtgaaggtacttgcagat 270
                ||||| |||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||
Sbjct: 25520579 attcgtgattacatcattacacaatccaagtgcatttgtggagtcaaggttcttgcagat 25520520

                                                                            
Query: 271      tccctcatcccaaatcccacagttagaagcacaatcagcaatttgttaggaacaaggact 330
                  ||| || || || |  ||| || | ||||||||||||||| || | | ||||||| ||
Sbjct: 25520519 gacctgattcccaaccaaacacttcggagcacaatcagcaatatgctggcaacaagggct 25520460

                                                                    
Query: 331      tgcagcactgccagcggtacagggaagcacagaagttcttcaggaagcaacg 382
                 ||||||   | || ||||||||||||||||| || |||||||| |||||||
Sbjct: 25520459 agcagcatcactagtggtacagggaagcacaggagctcttcaggcagcaacg 25520408
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  168 bits (85), Expect = 1e-38
 Identities = 139/157 (88%)
 Strand = Plus / Minus

                                                                            
Query: 54       tcctgttgatggcatcctatctgcacttgccccagctgcatctgtgagtgaagttgatga 113
                |||| |||||||||| | ||| || |||||||||||||||||||||||||  ||||| ||
Sbjct: 25612509 tcctattgatggcattccatcagctcttgccccagctgcatctgtgagtgttgttgacga 25612450

                                                                            
Query: 114      cttaccagcagaactccactgccaactatgtaataaggtgatggcagatgcggttttaac 173
                ||| ||||| || ||||| ||||  ||||||||||| ||||||||||||||||| || ||
Sbjct: 25612449 cttgccagctgagctccattgccggctatgtaataaagtgatggcagatgcggtgttgac 25612390

                                                     
Query: 174      aagcaagtgctgcttcgtcagtttctgtgataaatgt 210
                ||||||||||||||||| |||||||||||||||||||
Sbjct: 25612389 aagcaagtgctgcttcgacagtttctgtgataaatgt 25612353



 Score =  103 bits (52), Expect = 5e-19
 Identities = 142/172 (82%)
 Strand = Plus / Minus

                                                                            
Query: 211      attcgagattacattattacacaatcgaagtgcatttgtggagtgaaggtacttgcagat 270
                ||||| |||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||
Sbjct: 25611888 attcgtgattacatcattacacaatccaagtgcatttgtggagtcaaggttcttgcagat 25611829

                                                                            
Query: 271      tccctcatcccaaatcccacagttagaagcacaatcagcaatttgttaggaacaaggact 330
                  ||| || || || |  ||| || | ||||||||||||||| || | | ||||||| ||
Sbjct: 25611828 gacctgattcccaaccaaacacttcggagcacaatcagcaatatgctggcaacaagggct 25611769

                                                                    
Query: 331      tgcagcactgccagcggtacagggaagcacagaagttcttcaggaagcaacg 382
                 ||||||   | || ||||||||||||||||| || |||||||| |||||||
Sbjct: 25611768 agcagcatcactagtggtacagggaagcacaggagctcttcaggcagcaacg 25611717
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>gb|AC135600.3| Oryza sativa chromosome 3 BAC OSJNBb0047K21 genomic sequence, complete
             sequence
          Length = 117046

 Score =  168 bits (85), Expect = 1e-38
 Identities = 139/157 (88%)
 Strand = Plus / Plus

                                                                         
Query: 54    tcctgttgatggcatcctatctgcacttgccccagctgcatctgtgagtgaagttgatga 113
             |||| |||||||||| | ||| || |||||||||||||||||||||||||  ||||| ||
Sbjct: 13652 tcctattgatggcattccatcagctcttgccccagctgcatctgtgagtgttgttgacga 13711

                                                                         
Query: 114   cttaccagcagaactccactgccaactatgtaataaggtgatggcagatgcggttttaac 173
             ||| ||||| || ||||| ||||  ||||||||||| ||||||||||||||||| || ||
Sbjct: 13712 cttgccagctgagctccattgccggctatgtaataaagtgatggcagatgcggtgttgac 13771

                                                  
Query: 174   aagcaagtgctgcttcgtcagtttctgtgataaatgt 210
             ||||||||||||||||| |||||||||||||||||||
Sbjct: 13772 aagcaagtgctgcttcgacagtttctgtgataaatgt 13808



 Score =  103 bits (52), Expect = 5e-19
 Identities = 142/172 (82%)
 Strand = Plus / Plus

                                                                         
Query: 211   attcgagattacattattacacaatcgaagtgcatttgtggagtgaaggtacttgcagat 270
             ||||| |||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||
Sbjct: 14273 attcgtgattacatcattacacaatccaagtgcatttgtggagtcaaggttcttgcagat 14332

                                                                         
Query: 271   tccctcatcccaaatcccacagttagaagcacaatcagcaatttgttaggaacaaggact 330
               ||| || || || |  ||| || | ||||||||||||||| || | | ||||||| ||
Sbjct: 14333 gacctgattcccaaccaaacacttcggagcacaatcagcaatatgctggcaacaagggct 14392

                                                                 
Query: 331   tgcagcactgccagcggtacagggaagcacagaagttcttcaggaagcaacg 382
              ||||||   | || ||||||||||||||||| || |||||||| |||||||
Sbjct: 14393 agcagcatcactagtggtacagggaagcacaggagctcttcaggcagcaacg 14444
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>dbj|AK111930.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-A06, full
           insert sequence
          Length = 1413

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 346 ggtacagggaagcacagaagttcttcaggaagcaacg 382
           ||||||||||||||||| || |||||||| |||||||
Sbjct: 39  ggtacagggaagcacaggagctcttcaggcagcaacg 75
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>gb|AC097529.2| Homo sapiens BAC clone RP11-669F3 from 4, complete sequence
          Length = 54264

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 32/34 (94%), Gaps = 1/34 (2%)
 Strand = Plus / Minus

                                               
Query: 309   caatttgttaggaacaaggact-tgcagcactgc 341
             ||||||| |||||||||||||| |||||||||||
Sbjct: 33155 caatttgctaggaacaaggactctgcagcactgc 33122
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>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 54      tcctgttgatggcatcctatctgcacttg 82
               ||||||||| |||||||||||||| ||||
Sbjct: 3511944 tcctgttgaaggcatcctatctgctcttg 3511972
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>gb|AC097721.3| Homo sapiens BAC clone RP11-36O6 from 2, complete sequence
          Length = 144493

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 263   ttgcagattccctcatcccaa 283
             |||||||||||||||||||||
Sbjct: 74501 ttgcagattccctcatcccaa 74481
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>gb|AC124536.4| Mus musculus BAC clone RP23-332H4 from chromosome 3, complete sequence
          Length = 165047

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   ctcatcccaaatcccacagt 293
             ||||||||||||||||||||
Sbjct: 70403 ctcatcccaaatcccacagt 70384
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>gb|AC102092.7| Mus musculus chromosome 3, clone RP23-20B1, complete sequence
          Length = 234874

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   ctcatcccaaatcccacagt 293
             ||||||||||||||||||||
Sbjct: 43891 ctcatcccaaatcccacagt 43910
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>emb|AL139351.37| Human DNA sequence from clone RP11-321P16 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 97512

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    tctgcacttgccccagctgc 92
             ||||||||||||||||||||
Sbjct: 38354 tctgcacttgccccagctgc 38335
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>emb|AL096794.3|HSDJ454N4 Human DNA sequence from clone RP3-454N4 on chromosome 6q16.3-21,
             complete sequence
          Length = 80869

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   gattccctcatcccaaatcc 287
             ||||||||||||||||||||
Sbjct: 18255 gattccctcatcccaaatcc 18274
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>emb|BX842641.1| Neurospora crassa DNA linkage group I BAC contig B22I21
          Length = 124321

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 113  acttaccagcagaactccac 132
            ||||||||||||||||||||
Sbjct: 8757 acttaccagcagaactccac 8738
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>emb|BX842595.1| Neurospora crassa DNA linkage group II BAC clone B24N4
          Length = 64258

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 171   aacaagcaagtgctgcttcg 190
             ||||||||||||||||||||
Sbjct: 36345 aacaagcaagtgctgcttcg 36364
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>gb|AC090630.10| Homo sapiens 12 BAC RP11-630C16 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 184140

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 92   catctgtgagtgaagttgat 111
            ||||||||||||||||||||
Sbjct: 9335 catctgtgagtgaagttgat 9316
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>gb|AC023688.4| Drosophila melanogaster X BAC RP98-42F7 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 186714

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 303   aatcagcaatttgttaggaacaag 326
             ||||||||| ||||||||||||||
Sbjct: 37917 aatcagcaaattgttaggaacaag 37940
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>gb|AC087664.5| Homo sapiens chromosome 8, clone RP11-379I19, complete sequence
          Length = 199456

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    tagaagcacaatcagcaatt 313
              ||||||||||||||||||||
Sbjct: 135584 tagaagcacaatcagcaatt 135565
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>gb|AC011118.13| Homo sapiens chromosome 8, clone RP11-163D8, complete sequence
          Length = 135968

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 gtggagtgaaggtacttgca 267
           ||||||||||||||||||||
Sbjct: 674 gtggagtgaaggtacttgca 693
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>gb|AC023690.3| Drosophila melanogaster X BAC RP98-6M20 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 176233

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 303  aatcagcaatttgttaggaacaag 326
            ||||||||| ||||||||||||||
Sbjct: 6759 aatcagcaaattgttaggaacaag 6736
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>gb|AC090687.6| Homo sapiens chromosome 8, clone RP11-468A19, complete sequence
          Length = 150735

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 248  gtggagtgaaggtacttgca 267
            ||||||||||||||||||||
Sbjct: 4615 gtggagtgaaggtacttgca 4596
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 132      ctgccaactatgtaataagg 151
                ||||||||||||||||||||
Sbjct: 17891386 ctgccaactatgtaataagg 17891367
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>emb|BX842600.1| Neurospora crassa DNA linkage group II BAC clone B15P20
          Length = 74452

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   acttaccagcagaactccac 132
             ||||||||||||||||||||
Sbjct: 13774 acttaccagcagaactccac 13793
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>gb|AE003488.3| Drosophila melanogaster chromosome X, section 40 of 74 of the complete
             sequence
          Length = 315134

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 303   aatcagcaatttgttaggaacaag 326
             ||||||||| ||||||||||||||
Sbjct: 48193 aatcagcaaattgttaggaacaag 48170
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>gb|AC006197.1|AC006197 Homo sapiens, clone hRPK.2_A_1, complete sequence
          Length = 154354

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    catctgtgagtgaagttgat 111
             ||||||||||||||||||||
Sbjct: 25143 catctgtgagtgaagttgat 25162
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 132      ctgccaactatgtaataagg 151
                ||||||||||||||||||||
Sbjct: 17817761 ctgccaactatgtaataagg 17817742
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>emb|AL928744.3|CNS08CBH Oryza sativa chromosome 12, . BAC OSJNBa0041B10 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 147543

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    ctgccaactatgtaataagg 151
              ||||||||||||||||||||
Sbjct: 107114 ctgccaactatgtaataagg 107133
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>emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb0014C10 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 142246

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    ctgccaactatgtaataagg 151
              ||||||||||||||||||||
Sbjct: 110584 ctgccaactatgtaataagg 110565
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>gb|AC116954.4| Mus musculus BAC clone RP23-387L22 from 1, complete sequence
          Length = 191002

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      tttgacaactacaaaatgtc 23
              ||||||||||||||||||||
Sbjct: 128182 tttgacaactacaaaatgtc 128163


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,823,012
Number of Sequences: 3902068
Number of extensions: 3823012
Number of successful extensions: 67411
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 67285
Number of HSP's gapped (non-prelim): 122
length of query: 454
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 432
effective length of database: 17,147,199,772
effective search space: 7407590301504
effective search space used: 7407590301504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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