| Clone Name | basd22a08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ARVC_HUMAN (O00192) Armadillo repeat protein deleted in velo-car... | 83 | 2e-16 | 2 | ARVC_MOUSE (P98203) Armadillo repeat protein deleted in velo-car... | 77 | 1e-14 | 3 | CTND1_HUMAN (O60716) Catenin delta-1 (p120 catenin) (p120(ctn)) ... | 49 | 3e-06 | 4 | CTND1_XENLA (Q8AXM9) Catenin delta-1 (p120 catenin) (p120(ctn)) ... | 43 | 3e-04 | 5 | CTND1_MOUSE (P30999) Catenin delta-1 (p120 catenin) (p120(ctn)) ... | 41 | 0.001 |
|---|
>ARVC_HUMAN (O00192) Armadillo repeat protein deleted in velo-cardio-facial| syndrome Length = 962 Score = 83.2 bits (204), Expect = 2e-16 Identities = 42/67 (62%), Positives = 49/67 (73%), Gaps = 2/67 (2%) Frame = +1 Query: 1 KEGWNKANFQTAVXTL--PKGSKGNGKSGFDDSTLPLVDKSQVNKKSGSRDMIPMGELGP 174 K+GW KA FQ+A T PKG+ G GFDDSTLPLVDKS +K+GSRD+IPM LGP Sbjct: 841 KDGWTKARFQSAAATAKGPKGALSPG--GFDDSTLPLVDKSLEGEKTGSRDVIPMDALGP 898 Query: 175 DGYXTID 195 DGY T+D Sbjct: 899 DGYSTVD 905
>ARVC_MOUSE (P98203) Armadillo repeat protein deleted in velo-cardio-facial| syndrome homolog Length = 962 Score = 77.4 bits (189), Expect = 1e-14 Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 1/66 (1%) Frame = +1 Query: 1 KEGWNKANFQTAVXTLPKGSKGNGKSG-FDDSTLPLVDKSQVNKKSGSRDMIPMGELGPD 177 ++GW K+ FQ+A + KG KG SG FDDSTLPLVDKS +KS +RD+IPM LGPD Sbjct: 842 RDGWTKSRFQSA--STAKGPKGTPSSGGFDDSTLPLVDKSLDGEKSNTRDVIPMDTLGPD 899 Query: 178 GYXTID 195 GY T+D Sbjct: 900 GYATVD 905
>CTND1_HUMAN (O60716) Catenin delta-1 (p120 catenin) (p120(ctn))| (Cadherin-associated Src substrate) (CAS) (p120(cas)) Length = 968 Score = 49.3 bits (116), Expect = 3e-06 Identities = 23/57 (40%), Positives = 33/57 (57%) Frame = +1 Query: 1 KEGWNKANFQTAVXTLPKGSKGNGKSGFDDSTLPLVDKSQVNKKSGSRDMIPMGELG 171 KEGW K++FQ L S+ +DDSTLPL+D++Q + K R+ I M +G Sbjct: 841 KEGWKKSDFQV---NLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIQMSNMG 894
>CTND1_XENLA (Q8AXM9) Catenin delta-1 (p120 catenin) (p120(ctn)) (Xp120(ctn))| Length = 859 Score = 42.7 bits (99), Expect = 3e-04 Identities = 20/61 (32%), Positives = 33/61 (54%) Frame = +1 Query: 1 KEGWNKANFQTAVXTLPKGSKGNGKSGFDDSTLPLVDKSQVNKKSGSRDMIPMGELGPDG 180 K+GW K++FQ + + G+DDSTLPL+D++ N+K IP+ + D Sbjct: 761 KDGWKKSDFQVSTAAT------SSVQGYDDSTLPLIDRNLKNEKKSVNADIPLNDFIADQ 814 Query: 181 Y 183 + Sbjct: 815 F 815
>CTND1_MOUSE (P30999) Catenin delta-1 (p120 catenin) (p120(ctn))| (Cadherin-associated Src substrate) (CAS) (p120(cas)) Length = 911 Score = 40.8 bits (94), Expect = 0.001 Identities = 18/40 (45%), Positives = 25/40 (62%) Frame = +1 Query: 1 KEGWNKANFQTAVXTLPKGSKGNGKSGFDDSTLPLVDKSQ 120 KEGW K++FQ L S+ +DDSTLPL+D++Q Sbjct: 835 KEGWKKSDFQV---NLNNASRSQSSHSYDDSTLPLIDRNQ 871 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.307 0.132 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,222,199 Number of Sequences: 219361 Number of extensions: 574219 Number of successful extensions: 788 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 781 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 784 length of database: 80,573,946 effective HSP length: 40 effective length of database: 71,799,506 effective search space used: 1723188144 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (22.0 bits)