| Clone Name | basd22a02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SYP71_ARATH (Q9SF29) Syntaxin-71 (AtSYP71) | 79 | 4e-15 | 2 | SYP73_ARATH (Q94KK5) Syntaxin-73 (AtSYP73) | 64 | 1e-10 | 3 | SYP72_ARATH (Q94KK6) Syntaxin-72 (AtSYP72) | 64 | 1e-10 | 4 | BIN3_XENLA (Q5PPZ5) Bridging integrator 3 homolog | 29 | 2.7 | 5 | ZFPP_MYCLE (Q9CB36) Short-chain Z-isoprenyl diphosphate syntheta... | 28 | 8.0 |
|---|
>SYP71_ARATH (Q9SF29) Syntaxin-71 (AtSYP71)| Length = 266 Score = 78.6 bits (192), Expect = 4e-15 Identities = 35/55 (63%), Positives = 45/55 (81%) Frame = +2 Query: 95 MTVIDILTRVDAICQKYDKYDAEKLNGANVAGEDPFARLYGSVDAEISQCVEKAE 259 MTVIDILTRVD+IC+KYDKYD +K AN++G+D FARLYG+ + +I +EKAE Sbjct: 1 MTVIDILTRVDSICKKYDKYDVDKQREANISGDDAFARLYGAFETQIETALEKAE 55
>SYP73_ARATH (Q94KK5) Syntaxin-73 (AtSYP73)| Length = 263 Score = 63.9 bits (154), Expect = 1e-10 Identities = 27/55 (49%), Positives = 41/55 (74%) Frame = +2 Query: 95 MTVIDILTRVDAICQKYDKYDAEKLNGANVAGEDPFARLYGSVDAEISQCVEKAE 259 M VID++TRVD+IC+KY+KYD + ANV+G+D F+RLY +V+ + ++K E Sbjct: 1 MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTE 55
>SYP72_ARATH (Q94KK6) Syntaxin-72 (AtSYP72)| Length = 267 Score = 63.5 bits (153), Expect = 1e-10 Identities = 29/57 (50%), Positives = 40/57 (70%) Frame = +2 Query: 95 MTVIDILTRVDAICQKYDKYDAEKLNGANVAGEDPFARLYGSVDAEISQCVEKAEAA 265 M VIDI+ RVD IC+KYDKYD +K +G+D F+RL+ S+D++I + KAE A Sbjct: 1 MPVIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELA 57
>BIN3_XENLA (Q5PPZ5) Bridging integrator 3 homolog| Length = 252 Score = 29.3 bits (64), Expect = 2.7 Identities = 15/58 (25%), Positives = 30/58 (51%) Frame = +2 Query: 92 EMTVIDILTRVDAICQKYDKYDAEKLNGANVAGEDPFARLYGSVDAEISQCVEKAEAA 265 ++ + ++T +D ++ D ++ EK+N DP R Y SV ++ V++ E A Sbjct: 74 DVDFLQMVTALDTAMKRMDAFNQEKVNQIQKTVMDPLKR-YSSVFPSLNMAVKRREQA 130
>ZFPP_MYCLE (Q9CB36) Short-chain Z-isoprenyl diphosphate synthetase (EC| 2.5.1.-) (Z-FPP synthetase) (Z-isoprenyl diphosphate synthase) Length = 262 Score = 27.7 bits (60), Expect = 8.0 Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = +2 Query: 101 VIDILTRV-DAICQKYDKYDAEKLNGANVAGEDPFARLYGSVDA 229 +I+I+T V + IC +++ + + GE+P RL G+V++ Sbjct: 100 LIEIITDVVEEICAPANRWSVRTVGDLELLGEEPACRLRGAVES 143 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.312 0.136 0.453 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,155,619 Number of Sequences: 219361 Number of extensions: 314279 Number of successful extensions: 880 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 878 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 880 length of database: 80,573,946 effective HSP length: 65 effective length of database: 66,315,481 effective search space used: 1591571544 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)