ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd21k02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ249847.1|LMU249847 Lolium multiflorum mRNA for cysteine protease (see1 gene) Length = 1345 Score = 620 bits (313), Expect = e-174 Identities = 478/533 (89%) Strand = Plus / Plus Query: 13 ctgggaggagttccaggcgacccgtctcggcgcggcgcagacctgctcggcgacgctcgc 72 |||||||||||||||||| ||| || ||||| ||||||||||||||||| |||||||| Sbjct: 365 ctgggaggagttccaggccaccaagcttggcgccgcgcagacctgctcggccacgctcgc 424 Query: 73 cggcaaccacctcatgcgggacgccgccgcgctcccggagaccaaagactggagggagga 132 |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 425 cggcaaccacctgatgcgggacgccaacgcgctcccggagaccaaagactggagggagac 484 Query: 133 tgggatcgtcagccccgtcaaaaaccaggcccattgcggctcctgctggacgttcagcac 192 ||||||||| ||||| || ||| ||||||| ||||||||||||||||| |||||||| Sbjct: 485 tgggatcgttagccctgtgaaagaccaggcaagctgcggctcctgctggaccttcagcac 544 Query: 193 tactggcgcacttgaggcagcatatactcaggccactggaaagaacatctctctttctga 252 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 tactggagcacttgaggcagcatatactcaggccactggaaagaacatctctctttctga 604 Query: 253 gcaacagctggttgactgtgctggtgggttcaataactttggatgcaacggaggccttcc 312 ||||||||||||||||||||| |||| | ||| || ||||||||||||||||| ||||| Sbjct: 605 gcaacagctggttgactgtgccggtgcatacaacaattttggatgcaacggaggtcttcc 664 Query: 313 atcccaggcgtttgagtacatcaaatacaatggcgggatcgacaccgaggagtcctaccc 372 ||||||||| |||||||||||||| |||||||| || || |||||||||||||| ||||| Sbjct: 665 atcccaggcatttgagtacatcaagtacaatggtggcattgacaccgaggagtcttaccc 724 Query: 373 ttacaagggtgtcaatggtgtctgccattacaaggctgaaaatgctgcggttcaggtttt 432 |||||||||||||||||| |||||| | |||| | ||||||||||||| ||||||||| Sbjct: 725 ttacaagggtgtcaatggcgtctgcaaatacaggcctgaaaatgctgcagttcaggttgc 784 Query: 433 ggactcagtaaacatcacactgaatgccgaggatgaactgaagaacgccgttgggttggt 492 |||||| || |||||||| |||||||| ||||||||||||||||| || || |||||||| Sbjct: 785 ggactcggtcaacatcactctgaatgctgaggatgaactgaagaatgctgtcgggttggt 844 Query: 493 tcgcccagtgagtgtggcctttcaggtgattgacggtttcaggcagtacaaga 545 ||||||||| ||||| |||||| ||||||| |||||||||| ||||||||||| Sbjct: 845 tcgcccagtcagtgttgcctttgaggtgatcgacggtttcaagcagtacaaga 897
>emb|X05167.1|HVLEU Barley gene for thiol protease aleurain Length = 5372 Score = 523 bits (264), Expect = e-145 Identities = 267/268 (99%) Strand = Plus / Plus Query: 187 cagcactactggcgcacttgaggcagcatatactcaggccactggaaagaacatctctct 246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4107 cagcactactggcgcacttgaggcagcatatactcaggccactggaaagaacatctctct 4166 Query: 247 ttctgagcaacagctggttgactgtgctggtgggttcaataactttggatgcaacggagg 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4167 ttctgagcaacagctggttgactgtgctggtgggttcaataactttggatgcaacggagg 4226 Query: 307 ccttccatcccaggcgtttgagtacatcaaatacaatggcgggatcgacaccgaggagtc 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4227 ccttccatcccaggcgtttgagtacatcaaatacaatggcgggatcgacaccgaggagtc 4286 Query: 367 ctacccttacaagggtgtcaatggtgtctgccattacaaggctgaaaatgctgcggttca 426 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4287 ctacccttacaagggtgtcaatggcgtctgccattacaaggctgaaaatgctgcggttca 4346 Query: 427 ggttttggactcagtaaacatcacactg 454 |||||||||||||||||||||||||||| Sbjct: 4347 ggttttggactcagtaaacatcacactg 4374 Score = 210 bits (106), Expect = 4e-51 Identities = 113/114 (99%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 2 cggacatgagnctgggaggagttccaggcgacccgtctcggcgcggcgcagacctgctcg 61 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2003 cggacatgag-ctgggaggagttccaggcgacccgtctcggcgcggcgcagacctgctcg 2061 Query: 62 gcgacgctcgccggcaaccacctcatgcgggacgccgccgcgctcccggagacc 115 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2062 gcgacgctcgccggcaaccacctcatgcgggacgccgccgcgctcccggagacc 2115 Score = 174 bits (88), Expect = 2e-40 Identities = 91/92 (98%) Strand = Plus / Plus Query: 454 gaatgccgaggatgaactgaagaacgccgttgggttggttcgcccagtgagtgtggcctt 513 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 4468 gaatgccgaggatgaactgaagaacgccgtcgggttggttcgcccagtgagtgtggcctt 4527 Query: 514 tcaggtgattgacggtttcaggcagtacaaga 545 |||||||||||||||||||||||||||||||| Sbjct: 4528 tcaggtgattgacggtttcaggcagtacaaga 4559 Score = 147 bits (74), Expect = 4e-32 Identities = 74/74 (100%) Strand = Plus / Plus Query: 116 aaagactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccattgcggctcc 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2702 aaagactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccattgcggctcc 2761 Query: 176 tgctggacgttcag 189 |||||||||||||| Sbjct: 2762 tgctggacgttcag 2775
>dbj|AK066748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074D19, full insert sequence Length = 1486 Score = 446 bits (225), Expect = e-122 Identities = 466/545 (85%), Gaps = 1/545 (0%) Strand = Plus / Plus Query: 1 gcggacatgagnctgggaggagttccaggcgacccgtctcggcgcggcgcagacctgctc 60 ||||||||||| |||||||||||||||||||| ||| |||||||||||||||| |||||| Sbjct: 394 gcggacatgag-ctgggaggagttccaggcgagccggctcggcgcggcgcagaactgctc 452 Query: 61 ggcgacgctcgccggcaaccacctcatgcgggacgccgccgcgctcccggagaccaaaga 120 ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 453 ggcgacgctcgccggcaaccaccggatgcgcgacgccgccgctctcccggagaccaaaga 512 Query: 121 ctggagggaggatgggatcgtcagccccgtcaaaaaccaggcccattgcggctcctgctg 180 ||||||||||||||||||||| |||||||| ||| |||||| || || || ||||| || Sbjct: 513 ctggagggaggatgggatcgtgagccccgtgaaagaccagggtcactgtggttcctgttg 572 Query: 181 gacgttcagcactactggcgcacttgaggcagcatatactcaggccactggaaagaacat 240 ||| |||||||| ||||| | ||||||||||||||||||||||||||||| ||| | Sbjct: 573 gaccttcagcaccactggttctcttgaggcagcatatactcaggccactgggaagcctgt 632 Query: 241 ctctctttctgagcaacagctggttgactgtgctggtgggttcaataactttggatgcaa 300 ||||||||||||||| ||||||||||| |||||| || | |||||| || ||||||| Sbjct: 633 ctctctttctgagcagcagctggttgattgtgctactgcatacaataatttcggatgcag 692 Query: 301 cggaggccttccatcccaggcgtttgagtacatcaaatacaatggcgggatcgacaccga 360 |||||||| ||||| ||||| ||||||||||||||||||||||| || | ||||| || Sbjct: 693 tggaggcctaccatctcaggcctttgagtacatcaaatacaatggtggccttgacactga 752 Query: 361 ggagtcctacccttacaagggtgtcaatggtgtctgccattacaaggctgaaaatgctgc 420 ||| | |||||||||| |||||||||||| |||| ||||||||| ||||||| | || Sbjct: 753 agaggcttacccttacacgggtgtcaatggcatctgtcattacaagcctgaaaacgttgg 812 Query: 421 ggttcaggttttggactcagtaaacatcacactgaatgccgaggatgaactgaagaacgc 480 || ||||||||||||| || |||||||| ||| ||| |||||||| |||||||| || Sbjct: 813 agtcaaggttttggactccgttaacatcaccctgggtgctgaggatgagctgaagaatgc 872 Query: 481 cgttgggttggttcgcccagtgagtgtggcctttcaggtgattgacggtttcaggcagta 540 ||||| | ||||| ||||| ||||| |||||||||||||| ||||||||||| ||| Sbjct: 873 tgttggacttgttcgtccagttagtgttgcctttcaggtgatcaacggtttcaggatgta 932 Query: 541 caaga 545 ||||| Sbjct: 933 caaga 937
>dbj|D90408.1|RICOZC Oryza sativa (japonica cultivar-group) mRNA for oryzain gamma, complete cds Length = 1468 Score = 406 bits (205), Expect = e-110 Identities = 461/545 (84%), Gaps = 1/545 (0%) Strand = Plus / Plus Query: 1 gcggacatgagnctgggaggagttccaggcgacccgtctcggcgcggcgcagacctgctc 60 ||||||||||| |||||||||||||||||||| ||| |||||||||||||||| |||||| Sbjct: 377 gcggacatgag-ctgggaggagttccaggcgagccggctcggcgcggcgcagaactgctc 435 Query: 61 ggcgacgctcgccggcaaccacctcatgcgggacgccgccgcgctcccggagaccaaaga 120 ||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||||||| Sbjct: 436 ggcgacgctcgccggcaaccaccggatgcgcgacgcgcccgctctcccggagaccaaaga 495 Query: 121 ctggagggaggatgggatcgtcagccccgtcaaaaaccaggcccattgcggctcctgctg 180 ||||||||||||||||||||| |||||||| ||| |||||| || || |||||||| || Sbjct: 496 ctggagggaggatgggatcgtgagccccgtgaaagaccagggtcactgtggctcctgttg 555 Query: 181 gacgttcagcactactggcgcacttgaggcagcatatactcaggccactggaaagaacat 240 | | |||||||| |||||| | ||||||||| |||||||||||||||||| | | Sbjct: 556 gcccttcagcaccactggctctcttgaggcacgatatactcaggccactgggccgcctgt 615 Query: 241 ctctctttctgagcaacagctggttgactgtgctggtgggttcaataactttggatgcaa 300 ||||||||||||||| ||||||| ||| |||||| | | | |||||| || ||||||| Sbjct: 616 ctctctttctgagcagcagctggctgattgtgctactcgatacaataatttcggatgcag 675 Query: 301 cggaggccttccatcccaggcgtttgagtacatcaaatacaatggcgggatcgacaccga 360 |||||||| ||||| ||||| ||||||||||||||||||||||| || | ||||| || Sbjct: 676 tggaggcctaccatctcaggcctttgagtacatcaaatacaatggtggccttgacactga 735 Query: 361 ggagtcctacccttacaagggtgtcaatggtgtctgccattacaaggctgaaaatgctgc 420 ||| | |||||||||| |||||||||||| |||| ||||||||| ||||||| |||| Sbjct: 736 agaggcttacccttacacgggtgtcaatggcatctgtcattacaagcctgaaaacgctgg 795 Query: 421 ggttcaggttttggactcagtaaacatcacactgaatgccgaggatgaactgaagaacgc 480 || ||||||||||||| || |||||||| ||| ||| |||||||| |||||||| || Sbjct: 796 agtcaaggttttggactccgttaacatcaccctggttgctgaggatgagctgaagaatgc 855 Query: 481 cgttgggttggttcgcccagtgagtgtggcctttcaggtgattgacggtttcaggcagta 540 ||||| | ||||| ||||| ||||| |||||||||||||| ||||||||||| ||| Sbjct: 856 tgttggacttgttcgtccagttagtgttgcctttcaggtgatcaacggtttcaggatgta 915 Query: 541 caaga 545 ||||| Sbjct: 916 caaga 920
>gb|AY106223.1| Zea mays PCO114759 mRNA sequence Length = 1532 Score = 345 bits (174), Expect = 9e-92 Identities = 456/548 (83%), Gaps = 4/548 (0%) Strand = Plus / Plus Query: 1 gcggacatgagnctgggaggagttccaggcgacccgtctcggcgcggcgcagacctgctc 60 ||||||||||| |||||||||||||| |||||||| |||||||| || |||| |||||| Sbjct: 406 gcggacatgag-ctgggaggagttccgtgcgacccggctcggcgcagcccagaactgctc 464 Query: 61 ggcgacgctcgccggcaaccacctcatgcgggacgccgccg---cgctcccggagaccaa 117 || ||||| |||||||||||| |||| | |||||||| |||| |||||||| || Sbjct: 465 cgccacgcttaccggcaaccaccggatgcacgccgccgccgttgcgctgccggagacgaa 524 Query: 118 agactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccattgcggctcctg 177 ||||||||||||||||||||| || ||||| || |||||||||| ||| || || || || Sbjct: 525 agactggagggaggatgggattgtgagcccagtgaaaaaccagggccactgtggatcatg 584 Query: 178 ctggacgttcagcactactggcgcacttgaggcagcatatactcaggccactggaaagaa 237 |||||| |||||||||||||||||||||||||| |||||||| ||||| ||||| ||| Sbjct: 585 ctggaccttcagcactactggcgcacttgaggctgcatatacccaggcaactggcaagcc 644 Query: 238 catctctctttctgagcaacagctggttgactgtgctggtgggttcaataactttggatg 297 ||||||||| |||||||||||||| |||||||||| | || ||||| || || ||||| Sbjct: 645 catctctctctctgagcaacagcttgttgactgtggttttgcattcaacaatttcggatg 704 Query: 298 caacggaggccttccatcccaggcgtttgagtacatcaaatacaatggcgggatcgacac 357 |||||||||||||||||||||||| ||||| ||||||||||||||||| || | ||||| Sbjct: 705 caacggaggccttccatcccaggcctttgaatacatcaaatacaatggtggccttgacac 764 Query: 358 cgaggagtcctacccttacaagggtgtcaatggtgtctgccattacaaggctgaaaatgc 417 ||||| || ||||||||| | ||||||||||| ||||| | | ||| ||| |||| Sbjct: 765 tgaggaatcttacccttaccaaggtgtcaatggaatctgcaagtttaagaatgagaatgt 824 Query: 418 tgcggttcaggttttggactcagtaaacatcacactgaatgccgaggatgaactgaagaa 477 || || ||||||||||||| || |||||||| ||| ||| ||||||||||||||| | Sbjct: 825 tggagtcaaggttttggactcggttaacatcaccctgggtgctgaggatgaactgaagga 884 Query: 478 cgccgttgggttggttcgcccagtgagtgtggcctttcaggtgattgacggtttcaggca 537 || ||||| ||||||||||||| ||||| ||||| ||||||| |||||||||| Sbjct: 885 tgctgttggtctggttcgcccagttagtgttgccttcgaggtgatcactggtttcaggct 944 Query: 538 gtacaaga 545 |||||||| Sbjct: 945 gtacaaga 952
>dbj|D45403.1|MZECYPA Corn mRNA for cysteine proteinase, clone CCP2, complete cds Length = 1382 Score = 345 bits (174), Expect = 9e-92 Identities = 456/548 (83%), Gaps = 4/548 (0%) Strand = Plus / Plus Query: 1 gcggacatgagnctgggaggagttccaggcgacccgtctcggcgcggcgcagacctgctc 60 ||||||||||| |||||||||||||| |||||||| |||||||| || |||| |||||| Sbjct: 373 gcggacatgag-ctgggaggagttccgtgcgacccggctcggcgcagcccagaactgctc 431 Query: 61 ggcgacgctcgccggcaaccacctcatgcgggacgccgccg---cgctcccggagaccaa 117 || ||||| |||||||||||| ||||| | |||||||| |||| |||||||| || Sbjct: 432 cgccacgcttaccggcaaccaccggatgcgcgccgccgccgttgcgctgccggagacgaa 491 Query: 118 agactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccattgcggctcctg 177 ||||||||||||||||||||| || ||||| || |||||||||| ||| || || || || Sbjct: 492 agactggagggaggatgggattgtgagcccagtgaaaaaccagggccactgtggatcatg 551 Query: 178 ctggacgttcagcactactggcgcacttgaggcagcatatactcaggccactggaaagaa 237 |||||| |||||||||||||| ||||||||||| |||||||| ||||| ||||| ||| Sbjct: 552 ctggaccttcagcactactggtgcacttgaggctgcatatacccaggcaactggcaagcc 611 Query: 238 catctctctttctgagcaacagctggttgactgtgctggtgggttcaataactttggatg 297 ||||||||| |||||||||||||| |||||||||| | || ||||| || || ||||| Sbjct: 612 catctctctctctgagcaacagcttgttgactgtggttttgcattcaacaatttcggatg 671 Query: 298 caacggaggccttccatcccaggcgtttgagtacatcaaatacaatggcgggatcgacac 357 |||||||||||||||||||||||| ||||| ||||||||||||||||| || | ||||| Sbjct: 672 caacggaggccttccatcccaggcctttgaatacatcaaatacaatggtggccttgacac 731 Query: 358 cgaggagtcctacccttacaagggtgtcaatggtgtctgccattacaaggctgaaaatgc 417 ||||| || ||||||||| | ||||||||||| ||||| | | ||| ||| |||| Sbjct: 732 tgaggaatcttacccttaccaaggtgtcaatggaatctgcaagtttaagaatgagaatgt 791 Query: 418 tgcggttcaggttttggactcagtaaacatcacactgaatgccgaggatgaactgaagaa 477 || || ||||||||||||| || |||||||| ||| ||| ||||||||||||||| | Sbjct: 792 tggagtcaaggttttggactcggttaacatcaccctgggtgctgaggatgaactgaagga 851 Query: 478 cgccgttgggttggttcgcccagtgagtgtggcctttcaggtgattgacggtttcaggca 537 || ||||| ||||||||||||| ||||| ||||| ||||||| |||||||||| Sbjct: 852 tgctgttggtctggttcgcccagttagtgttgccttcgaggtgatcactggtttcaggct 911 Query: 538 gtacaaga 545 |||||||| Sbjct: 912 gtacaaga 919
>emb|X99936.1|ZMSEE1 Z.mays mRNA for cysteine proteinase, See1 Length = 1412 Score = 321 bits (162), Expect = 1e-84 Identities = 453/548 (82%), Gaps = 4/548 (0%) Strand = Plus / Plus Query: 1 gcggacatgagnctgggaggagttccaggcgacccgtctcggcgcggcgcagacctgctc 60 ||||||||||| |||||||||||||| |||||||| ||||| || || |||| |||||| Sbjct: 384 gcggacatgag-ctgggaggagttccgtgcgacccggctcggtgcagcccagaactgctc 442 Query: 61 ggcgacgctcgccggcaaccacctcatgcgggacgccgccg---cgctcccggagaccaa 117 || ||||| |||||||||||| ||||| | |||||||| |||| |||||||| || Sbjct: 443 cgccacgcttaccggcaaccaccggatgcgcgccgccgccgttgcgctgccggagacgaa 502 Query: 118 agactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccattgcggctcctg 177 ||||||||||||||||||||| || ||||| || |||||||||| ||| || || || || Sbjct: 503 agactggagggaggatgggattgtgagcccagtgaaaaaccagggccactgtggatcatg 562 Query: 178 ctggacgttcagcactactggcgcacttgaggcagcatatactcaggccactggaaagaa 237 |||||| |||||||||||||| ||||||||||| |||||||| ||||| ||||| ||| Sbjct: 563 ctggaccttcagcactactggtgcacttgaggctgcatatacccaggcaactggcaagcc 622 Query: 238 catctctctttctgagcaacagctggttgactgtgctggtgggttcaataactttggatg 297 ||||||||| |||||||||||||| |||||||||| | | ||||| || || ||||| Sbjct: 623 catctctctctctgagcaacagcttgttgactgtggtttggcattcaacaatttcggatg 682 Query: 298 caacggaggccttccatcccaggcgtttgagtacatcaaatacaatggcgggatcgacac 357 |||||||||||||||||||||||| ||||| ||||||||||||||||| || | ||||| Sbjct: 683 caacggaggccttccatcccaggcctttgaatacatcaaatacaatggtggccttgacac 742 Query: 358 cgaggagtcctacccttacaagggtgtcaatggtgtctgccattacaaggctgaaaatgc 417 ||||| || ||||||||| | ||||||||||| ||| | | | ||| ||| |||| Sbjct: 743 tgaggaatcttacccttaccaaggtgtcaatggaatctccaagtttaagaatgagaatgt 802 Query: 418 tgcggttcaggttttggactcagtaaacatcacactgaatgccgaggatgaactgaagaa 477 || || ||||||||||||| || |||||||| ||| ||| ||||||||||||||| | Sbjct: 803 tggagtcaaggttttggactcggttaacatcaccctgggtgctgaggatgaactgaagga 862 Query: 478 cgccgttgggttggttcgcccagtgagtgtggcctttcaggtgattgacggtttcaggca 537 || ||||| ||||||||||||| ||||| ||||| ||||||| |||||||||| Sbjct: 863 tgctgttggtctggttcgcccagttagtgttgccttcgaggtgatcactggtttcaggct 922 Query: 538 gtacaaga 545 |||||||| Sbjct: 923 gtacaaga 930
>emb|Y10780.1|SSY10780 S.stapfianus pSD.18 mRNA Length = 292 Score = 232 bits (117), Expect = 1e-57 Identities = 237/277 (85%) Strand = Plus / Plus Query: 143 agccccgtcaaaaaccaggcccattgcggctcctgctggacgttcagcactactggcgca 202 |||||||| |||||||||| || || || |||||||||||||||||||||||||| ||| Sbjct: 11 agccccgtaaaaaaccagggtcactgtgggtcctgctggacgttcagcactactggtgca 70 Query: 203 cttgaggcagcatatactcaggccactggaaagaacatctctctttctgagcaacagctg 262 ||||||||||| |||||||||||||| || || ||||||||| ||||| ||||| || Sbjct: 71 cttgaggcagcctatactcaggccacggggaaacccatctctctctctgaacaacaactt 130 Query: 263 gttgactgtgctggtgggttcaataactttggatgcaacggaggccttccatcccaggcg 322 ||||| ||||||||| | ||| || || |||||||| |||||||||||||||||||| Sbjct: 131 gttgattgtgctggtccatacaacaatttcggatgcaatggaggccttccatcccaggct 190 Query: 323 tttgagtacatcaaatacaatggcgggatcgacaccgaggagtcctacccttacaagggt 382 |||||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||| Sbjct: 191 tttgagtacatcaaatacaatggcggccttgacactgaggaatcttacccttacaagggt 250 Query: 383 gtcaatggtgtctgccattacaaggctgaaaatgctg 419 ||||||| || || |||||||| | |||||||||| Sbjct: 251 gtcaatgaagtttgtcattacaaacccgaaaatgctg 287
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 174 bits (88), Expect = 2e-40 Identities = 208/248 (83%) Strand = Plus / Plus Query: 203 cttgaggcagcatatactcaggccactggaaagaacatctctctttctgagcaacagctg 262 ||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||| Sbjct: 16387714 cttgaggcagcatatactcaggccactgggaagcctgtctctctttctgagcagcagctg 16387773 Query: 263 gttgactgtgctggtgggttcaataactttggatgcaacggaggccttccatcccaggcg 322 ||||| |||||| || | |||||| || ||||||| |||||||| ||||| ||||| Sbjct: 16387774 gttgattgtgctactgcatacaataatttcggatgcagtggaggcctaccatctcaggcc 16387833 Query: 323 tttgagtacatcaaatacaatggcgggatcgacaccgaggagtcctacccttacaagggt 382 ||||||||||||||||||||||| || | ||||| || ||| | |||||||||| |||| Sbjct: 16387834 tttgagtacatcaaatacaatggtggccttgacactgaagaggcttacccttacacgggt 16387893 Query: 383 gtcaatggtgtctgccattacaaggctgaaaatgctgcggttcaggttttggactcagta 442 |||||||| |||| ||||||||| ||||||| | || || ||||||||||||| || Sbjct: 16387894 gtcaatggcatctgtcattacaagcctgaaaacgttggagtcaaggttttggactccgtt 16387953 Query: 443 aacatcac 450 |||||||| Sbjct: 16387954 aacatcac 16387961 Score = 157 bits (79), Expect = 5e-35 Identities = 107/115 (93%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 1 gcggacatgagnctgggaggagttccaggcgacccgtctcggcgcggcgcagacctgctc 60 ||||||||||| |||||||||||||||||||| ||| |||||||||||||||| |||||| Sbjct: 16385086 gcggacatgag-ctgggaggagttccaggcgagccggctcggcgcggcgcagaactgctc 16385144 Query: 61 ggcgacgctcgccggcaaccacctcatgcgggacgccgccgcgctcccggagacc 115 ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 16385145 ggcgacgctcgccggcaaccaccggatgcgcgacgccgccgctctcccggagacc 16385199 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 116 aaagactggagggaggatgggatcgtcagccccgtcaaaaaccagg 161 |||||||||||||||||||||||||| |||||||| ||| |||||| Sbjct: 16385898 aaagactggagggaggatgggatcgtgagccccgtgaaagaccagg 16385943 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 461 gaggatgaactgaagaacgccgttgggttggttcgcccagtgagtgtggcctttcaggtg 520 |||||||| |||||||| || ||||| | ||||| ||||| ||||| |||||||||||| Sbjct: 16388064 gaggatgagctgaagaatgctgttggacttgttcgtccagttagtgttgcctttcaggtg 16388123 Query: 521 attgacggtttcaggcagtacaaga 545 || ||||||||||| |||||||| Sbjct: 16388124 atcaacggtttcaggatgtacaaga 16388148
>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0046G12 Length = 189391 Score = 174 bits (88), Expect = 2e-40 Identities = 208/248 (83%) Strand = Plus / Plus Query: 203 cttgaggcagcatatactcaggccactggaaagaacatctctctttctgagcaacagctg 262 ||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||| Sbjct: 76261 cttgaggcagcatatactcaggccactgggaagcctgtctctctttctgagcagcagctg 76320 Query: 263 gttgactgtgctggtgggttcaataactttggatgcaacggaggccttccatcccaggcg 322 ||||| |||||| || | |||||| || ||||||| |||||||| ||||| ||||| Sbjct: 76321 gttgattgtgctactgcatacaataatttcggatgcagtggaggcctaccatctcaggcc 76380 Query: 323 tttgagtacatcaaatacaatggcgggatcgacaccgaggagtcctacccttacaagggt 382 ||||||||||||||||||||||| || | ||||| || ||| | |||||||||| |||| Sbjct: 76381 tttgagtacatcaaatacaatggtggccttgacactgaagaggcttacccttacacgggt 76440 Query: 383 gtcaatggtgtctgccattacaaggctgaaaatgctgcggttcaggttttggactcagta 442 |||||||| |||| ||||||||| ||||||| | || || ||||||||||||| || Sbjct: 76441 gtcaatggcatctgtcattacaagcctgaaaacgttggagtcaaggttttggactccgtt 76500 Query: 443 aacatcac 450 |||||||| Sbjct: 76501 aacatcac 76508 Score = 157 bits (79), Expect = 5e-35 Identities = 107/115 (93%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 1 gcggacatgagnctgggaggagttccaggcgacccgtctcggcgcggcgcagacctgctc 60 ||||||||||| |||||||||||||||||||| ||| |||||||||||||||| |||||| Sbjct: 73633 gcggacatgag-ctgggaggagttccaggcgagccggctcggcgcggcgcagaactgctc 73691 Query: 61 ggcgacgctcgccggcaaccacctcatgcgggacgccgccgcgctcccggagacc 115 ||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| Sbjct: 73692 ggcgacgctcgccggcaaccaccggatgcgcgacgccgccgctctcccggagacc 73746 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 116 aaagactggagggaggatgggatcgtcagccccgtcaaaaaccagg 161 |||||||||||||||||||||||||| |||||||| ||| |||||| Sbjct: 74445 aaagactggagggaggatgggatcgtgagccccgtgaaagaccagg 74490 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 461 gaggatgaactgaagaacgccgttgggttggttcgcccagtgagtgtggcctttcaggtg 520 |||||||| |||||||| || ||||| | ||||| ||||| ||||| |||||||||||| Sbjct: 76611 gaggatgagctgaagaatgctgttggacttgttcgtccagttagtgttgcctttcaggtg 76670 Query: 521 attgacggtttcaggcagtacaaga 545 || ||||||||||| |||||||| Sbjct: 76671 atcaacggtttcaggatgtacaaga 76695
>emb|X58859.1|HVTHIOL Barley DNA with region homologous to thiol protease (aleurain) Length = 3333 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 24 tccaggcgacccgtctcggcgcggcgcagacctgctcggcgacgctcgccggcaaccacc 83 ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 863 tccaggcgacccgactcggtgtggcgcagacctgctcggcgacgctcgccggcaaccacc 922 Query: 84 tcatgcgggacgccgccgcgctcccggagacc 115 | |||||||||||||||||||||||||||||| Sbjct: 923 tgatgcgggacgccgccgcgctcccggagacc 954
>dbj|AB032168.1| Nicotiana tabacum NTCP-23 mRNA for cysteine protease, complete cds Length = 1340 Score = 117 bits (59), Expect = 4e-23 Identities = 194/239 (81%) Strand = Plus / Plus Query: 107 ccggagaccaaagactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccat 166 |||||||| ||||||||| |||| | |||||| |||||||| ||||| ||||||| | | Sbjct: 464 ccggagacgaaagactggcgggaagctgggattgtcagcccagtcaagaaccagggcaag 523 Query: 167 tgcggctcctgctggacgttcagcactactggcgcacttgaggcagcatatactcaggcc 226 ||||| || |||||||| |||||||||||||| ||||| || |||||||||| || || Sbjct: 524 tgcggatcttgctggacattcagcactactggtgcactagaagcagcatatagccaagca 583 Query: 227 actggaaagaacatctctctttctgagcaacagctggttgactgtgctggtgggttcaat 286 ||| ||| |||||||| |||||||| ||||| || ||||||||||| | || ||| Sbjct: 584 tttgggaagggaatctctctatctgagcagcagcttgtggactgtgctggagcttttaat 643 Query: 287 aactttggatgcaacggaggccttccatcccaggcgtttgagtacatcaaatacaatgg 345 |||||||| ||||| || || || ||||| || || |||||||| || |||| |||||| Sbjct: 644 aactttggctgcaatggtgggctcccatcacaagcctttgagtatattaaatccaatgg 702
>gb|DQ492683.1| Medicago sativa cysteine protease (CP1) mRNA, complete cds Length = 1346 Score = 111 bits (56), Expect = 2e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 230 ggaaagaacatctctctttctgagcaacagctggttgactgtgctggtgggttcaataac 289 |||||||| ||||||||||||||||| ||||| || ||||||||||||| ||||||||| Sbjct: 569 ggaaagaatatctctctttctgagcagcagctagtggactgtgctggtgctttcaataac 628 Query: 290 tttggatgcaacggaggccttccatcccaggcgtttgagtacatcaaatacaatgg 345 ||||| ||||| || || || |||||||| || ||||| ||||| ||||||||||| Sbjct: 629 tttggctgcaatggtgggctgccatcccaagcctttgaatacattaaatacaatgg 684
>emb|X93220.2|CACG2 Cicer arietinum partial mRNA for cysteine proteinase (cacG2 gene) Length = 1484 Score = 109 bits (55), Expect = 1e-20 Identities = 148/179 (82%) Strand = Plus / Plus Query: 167 tgcggctcctgctggacgttcagcactactggcgcacttgaggcagcatatactcaggcc 226 ||||| || |||||||| |||||||| ||||| ||| | || ||||| || | |||||| Sbjct: 481 tgcggatcatgctggacattcagcacaactggagcattggaagcagcttacgcacaggcc 540 Query: 227 actggaaagaacatctctctttctgagcaacagctggttgactgtgctggtgggttcaat 286 ||||||||| ||||||||||||||||| ||||| || |||||||||||| |||||| Sbjct: 541 tttggaaagaatatctctctttctgagcagcagctagtggactgtgctggttctttcaat 600 Query: 287 aactttggatgcaacggaggccttccatcccaggcgtttgagtacatcaaatacaatgg 345 |||||||| |||| ||| || | |||||||| || ||||| ||||| ||||||||||| Sbjct: 601 aactttggctgcagcggtggtttgccatcccaagcctttgaatacattaaatacaatgg 659
>gb|U31094.1|PHU31094 Petunia hybrida thiol protease homolog P21 (PeTh3) mRNA, complete cds Length = 1347 Score = 103 bits (52), Expect = 6e-19 Identities = 190/236 (80%) Strand = Plus / Plus Query: 110 gagaccaaagactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccattgc 169 ||||| |||||||||||||| | |||||| |||||||| ||||| || |||| | | ||| Sbjct: 442 gagacgaaagactggagggaagctgggattgtcagcccagtcaagaatcagggcaagtgc 501 Query: 170 ggctcctgctggacgttcagcactactggcgcacttgaggcagcatatactcaggccact 229 || || |||||||| |||||||| ||||| ||| | |||||||||||||| || | Sbjct: 502 ggttcttgctggacattcagcaccactggtgcattggaggcagcatatacccaaaaattt 561 Query: 230 ggaaagaacatctctctttctgagcaacagctggttgactgtgctggtgggttcaataac 289 || ||| ||||| || |||||||| ||||| || ||||||||||| | || |||||| Sbjct: 562 gggaagggaatctcgctatctgagcagcagcttgtagactgtgctggagcttttaataac 621 Query: 290 tttggatgcaacggaggccttccatcccaggcgtttgagtacatcaaatacaatgg 345 ||||| |||||||| || || ||||| || || ||||||||||| |||| |||||| Sbjct: 622 tttggctgcaacggtggactcccatcacaagcctttgagtacattaaatccaatgg 677
>gb|DQ084022.1| Nicotiana benthamiana cysteine proteinase aleuran type mRNA, complete cds Length = 1326 Score = 101 bits (51), Expect = 2e-18 Identities = 192/239 (80%) Strand = Plus / Plus Query: 107 ccggagaccaaagactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccat 166 |||||||| |||||||||||||| | |||||| |||||||| ||||| ||||||| | | Sbjct: 466 ccggagacgaaagactggagggaagctgggattgtcagcccagtcaagaaccagggcaag 525 Query: 167 tgcggctcctgctggacgttcagcactactggcgcacttgaggcagcatatactcaggcc 226 ||||| || |||||||| |||||||||||||| ||||| || ||||||||| || || Sbjct: 526 tgcggatcttgctggacattcagcactactggtgcactagaagcagcatatggccaagca 585 Query: 227 actggaaagaacatctctctttctgagcaacagctggttgactgtgctggtgggttcaat 286 ||| ||| || ||||| ||||| || ||||| || ||||||||||| | || ||| Sbjct: 586 tttgggaagggaatttctctatctgaacagcagcttgtggactgtgctggagcttttaat 645 Query: 287 aactttggatgcaacggaggccttccatcccaggcgtttgagtacatcaaatacaatgg 345 |||||||| ||||| || || || ||||| || || |||||||| || |||| |||||| Sbjct: 646 aactttggctgcaatggtgggctcccatcacaagcctttgagtatattaaatccaatgg 704
>gb|AF213939.1|AF213939 Prunus dulcis cysteine protease (CYP1) mRNA, partial cds Length = 536 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 176 tgctggacgttcagcactactggcgcacttgaggcagcatatactcaggccactggaaag 235 |||||||| |||||||| ||||| || ||||||||||| ||| ||||| |||||| Sbjct: 22 tgctggacattcagcaccactggggctcttgaggcagcttatgtgcaggcattcggaaag 81 Query: 236 aacatctctctttctgagcaacagctggttgactgtgctggtgggttcaataactttgga 295 | |||||||| |||||||| ||||| || || |||||||| | |||||||||||||| Sbjct: 82 caaatctctctctctgagcagcagcttgtggattgtgctggagctttcaataactttggc 141 Query: 296 tgcaacggaggccttccatcccaggcgtttgagtacatcaaatacaatggcgggatcgac 355 ||| | || || | ||||| || || |||||||||||||||||||| ||||| ||||| Sbjct: 142 tgccatggtgggttgccatctcaagcttttgagtacatcaaatacaacggcggtctcgac 201 Query: 356 accgagg 362 ||||||| Sbjct: 202 accgagg 208
>gb|U93166.1|PAU93166 Prunus armeniaca cysteine protease mRNA, complete cds Length = 1444 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 176 tgctggacgttcagcactactggcgcacttgaggcagcatatactcaggccactggaaag 235 |||||||| |||||||| ||||| || ||||||||||| ||| ||||| ||||| Sbjct: 574 tgctggacattcagcaccactggggctcttgaggcagcttatgtgcaggcattccgaaag 633 Query: 236 aacatctctctttctgagcaacagctggttgactgtgctggtgggttcaataactttgga 295 | |||||||| |||||||| ||||| || || |||||||| | |||||||||||||| Sbjct: 634 caaatctctctctctgagcagcagcttgtggattgtgctggagctttcaataactttggc 693 Query: 296 tgcaacggaggccttccatcccaggcgtttgagtacatcaaatacaatggcgggatcgac 355 ||| | || || | ||||| || || |||||||||||||||||||||||||| ||||| Sbjct: 694 tgccatggtgggttgccatctcaagcttttgagtacatcaaatacaatggcggtctcgac 753 Query: 356 accgagg 362 ||||||| Sbjct: 754 accgagg 760
>gb|DQ209288.1| Brassica napus cysteine protease mRNA, complete cds Length = 1223 Score = 81.8 bits (41), Expect = 2e-12 Identities = 206/259 (79%), Gaps = 4/259 (1%) Strand = Plus / Plus Query: 107 ccggagaccaaagactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccat 166 ||||| |||||||||||||| || ||||| || || ||||| |||||| |||||| | Sbjct: 427 ccggaaaccaaagactggagagaagatggtattgttagccctgtcaaagaccaggggggt 486 Query: 167 tgcggctcctgctggacgttcagcactactggcgcacttgaggcagcatatactcaggcc 226 || || || |||||||| ||||| |||||||| || ||||||||||| ||| || || Sbjct: 487 tgtggatcgtgctggacattcagtactactggagcgcttgaggcagcttatcaccaagca 546 Query: 227 actggaaa--gaacatctctctttctgagcaacagctggttgactgtgctggtgggttca 284 |||||| ||| ||| |||| ||||||||||||| || || |||||||| | |||| Sbjct: 547 tttggaaaaggaatatcactct--ctgagcaacagcttgtggattgtgctggagctttca 604 Query: 285 ataactttggatgcaacggaggccttccatcccaggcgtttgagtacatcaaatacaatg 344 | |||| ||| ||||| || |||||||| ||||| || ||||| |||||||||| ||| | Sbjct: 605 acaactatggctgcaatggtggccttccttcccaagcctttgaatacatcaaatccaacg 664 Query: 345 gcgggatcgacaccgagga 363 |||| ||||||| ||||| Sbjct: 665 gcggcctcgacacggagga 683
>gb|AF454960.1|AF454960 Brassica oleracea senescence-associated cysteine protease (CP5) mRNA, complete cds Length = 1332 Score = 81.8 bits (41), Expect = 2e-12 Identities = 206/259 (79%), Gaps = 4/259 (1%) Strand = Plus / Plus Query: 107 ccggagaccaaagactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccat 166 ||||| |||||||||||||| || ||||| || || ||||| |||||| |||||| | Sbjct: 458 ccggaaaccaaagactggagagaagatggtattgttagccctgtcaaagaccaggggggt 517 Query: 167 tgcggctcctgctggacgttcagcactactggcgcacttgaggcagcatatactcaggcc 226 || || || |||||||| ||||| |||||||| || ||||||||||| ||| || || Sbjct: 518 tgtggatcgtgctggacattcagtactactggagcgcttgaggcagcttatcaccaagca 577 Query: 227 actggaaa--gaacatctctctttctgagcaacagctggttgactgtgctggtgggttca 284 |||||| ||| ||| |||| ||||||||||||| || || |||||||| | |||| Sbjct: 578 tttggaaaaggaatatcactct--ctgagcaacagcttgtggattgtgctggagctttca 635 Query: 285 ataactttggatgcaacggaggccttccatcccaggcgtttgagtacatcaaatacaatg 344 | |||| ||| ||||| || |||||||| ||||| || ||||| |||||||||| ||| | Sbjct: 636 acaactatggctgcaatggtggccttccttcccaagcctttgaatacatcaaatccaacg 695 Query: 345 gcgggatcgacaccgagga 363 |||| ||||||| ||||| Sbjct: 696 gcggcctcgacacggagga 714
>emb|AM260512.1| Platanus acerifolia partial mRNA for cysteine protease-like protein (cys gene) Length = 278 Score = 73.8 bits (37), Expect = 5e-10 Identities = 157/197 (79%) Strand = Plus / Plus Query: 104 ctcccggagaccaaagactggagggaggatgggatcgtcagccccgtcaaaaaccaggcc 163 ||||| ||||| ||||||||||| || || || || |||||||| || ||||| || | | Sbjct: 53 ctccctgagacgaaagactggagagaagaaggcatagtcagcccagttaaaaatcaaggc 112 Query: 164 cattgcggctcctgctggacgttcagcactactggcgcacttgaggcagcatatactcag 223 || || || || ||||||||||||||||| || || || || |||||||||||| | ||| Sbjct: 113 cactgtggatcttgctggacgttcagcaccaccggagctctggaggcagcatatgcacag 172 Query: 224 gccactggaaagaacatctctctttctgagcaacagctggttgactgtgctggtgggttc 283 || ||||| ||||||||| || || || ||||| || ||||||||||| | ||| Sbjct: 173 gcattcggaaatggcatctctctgtcagaacagcagctcgtggactgtgctggagcattc 232 Query: 284 aataactttggatgcaa 300 ||||||||||| ||||| Sbjct: 233 aataactttggttgcaa 249
>emb|Z68291.1|PSRNACP P.sativum mRNA for cysteine protease Length = 1381 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 230 ggaaagaacatctctctttctgagcaacagctggttgactgtgctggtgggttcaataac 289 |||||||| ||||||||||||||||| ||| | || || |||||||||| ||||||||| Sbjct: 554 ggaaagaatatctctctttctgagcagcagttagtggattgtgctggtgctttcaataac 613 Query: 290 tttggatgcaacggaggccttccatcccaggcgtttgagtacatcaaatacaatgg 345 ||||| |||| ||| || | || || || || ||||| ||||| ||||||||||| Sbjct: 614 tttggctgcagcggcgggttaccgtcacaagcctttgaatacataaaatacaatgg 669
>emb|AJ278699.1|PSA278699 Pisum sativum mRNA for protease (elsa gene) Length = 1361 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 230 ggaaagaacatctctctttctgagcaacagctggttgactgtgctggtgggttcaataac 289 |||||||| ||||||||||||||||| ||| | || || |||||||||| ||||||||| Sbjct: 550 ggaaagaatatctctctttctgagcagcagttagtggattgtgctggtgctttcaataac 609 Query: 290 tttggatgcaacggaggccttccatcccaggcgtttgagtacatcaaatacaatgg 345 ||||| |||| ||| || | || || || || ||||| ||||| ||||||||||| Sbjct: 610 tttggctgcagcggcgggttaccgtcacaagcctttgaatacataaaatacaatgg 665
>ref|NM_125429.2| Arabidopsis thaliana AALP; cysteine-type endopeptidase/ cysteine-type peptidase AT5G60360 (AALP) transcript variant AT5G60360.1 mRNA, complete cds Length = 1468 Score = 69.9 bits (35), Expect = 8e-09 Identities = 176/223 (78%) Strand = Plus / Plus Query: 116 aaagactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccattgcggctcc 175 ||||||||||| || ||||| ||||| || || |||||| | |||| ||| || || Sbjct: 580 aaagactggagagaagatggtatcgttagtccggtcaaagatcagggaggttgtggatct 639 Query: 176 tgctggacgttcagcactactggcgcacttgaggcagcatatactcaggccactggaaag 235 |||||||| |||||||| ||||| || ||||||||||| || |||||| |||||| Sbjct: 640 tgctggacattcagcacaactggagctcttgaggcagcttaccatcaggcatttggaaaa 699 Query: 236 aacatctctctttctgagcaacagctggttgactgtgctggtgggttcaataactttgga 295 || ||||| |||||||||||||| || || |||||||| | |||||||||| ||| Sbjct: 700 ggaatttctctctctgagcaacagcttgtggattgtgctggagctttcaataactatggt 759 Query: 296 tgcaacggaggccttccatcccaggcgtttgagtacatcaaat 338 ||||| || |||||||| || || || ||||| |||||||||| Sbjct: 760 tgcaatggtggccttccttctcaagcctttgaatacatcaaat 802
>ref|NM_001037029.1| Arabidopsis thaliana AALP; cysteine-type endopeptidase/ cysteine-type peptidase AT5G60360 (AALP) transcript variant AT5G60360.2 mRNA, complete cds Length = 1466 Score = 69.9 bits (35), Expect = 8e-09 Identities = 176/223 (78%) Strand = Plus / Plus Query: 116 aaagactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccattgcggctcc 175 ||||||||||| || ||||| ||||| || || |||||| | |||| ||| || || Sbjct: 580 aaagactggagagaagatggtatcgttagtccggtcaaagatcagggaggttgtggatct 639 Query: 176 tgctggacgttcagcactactggcgcacttgaggcagcatatactcaggccactggaaag 235 |||||||| |||||||| ||||| || ||||||||||| || |||||| |||||| Sbjct: 640 tgctggacattcagcacaactggagctcttgaggcagcttaccatcaggcatttggaaaa 699 Query: 236 aacatctctctttctgagcaacagctggttgactgtgctggtgggttcaataactttgga 295 || ||||| |||||||||||||| || || |||||||| | |||||||||| ||| Sbjct: 700 ggaatttctctctctgagcaacagcttgtggattgtgctggagctttcaataactatggt 759 Query: 296 tgcaacggaggccttccatcccaggcgtttgagtacatcaaat 338 ||||| || |||||||| || || || ||||| |||||||||| Sbjct: 760 tgcaatggtggccttccttctcaagcctttgaatacatcaaat 802
>gb|BT000676.1| Arabidopsis thaliana clone RAFL08-12-G17 (R11172) putative cysteine proteinase AALP (At5g60360) mRNA, complete cds Length = 1331 Score = 69.9 bits (35), Expect = 8e-09 Identities = 176/223 (78%) Strand = Plus / Plus Query: 116 aaagactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccattgcggctcc 175 ||||||||||| || ||||| ||||| || || |||||| | |||| ||| || || Sbjct: 501 aaagactggagagaagatggtatcgttagtccggtcaaagatcagggaggttgtggatct 560 Query: 176 tgctggacgttcagcactactggcgcacttgaggcagcatatactcaggccactggaaag 235 |||||||| |||||||| ||||| || ||||||||||| || |||||| |||||| Sbjct: 561 tgctggacattcagcacaactggagctcttgaggcagcttaccatcaggcatttggaaaa 620 Query: 236 aacatctctctttctgagcaacagctggttgactgtgctggtgggttcaataactttgga 295 || ||||| |||||||||||||| || || |||||||| | |||||||||| ||| Sbjct: 621 ggaatttctctctctgagcaacagcttgtggattgtgctggagctttcaataactatggt 680 Query: 296 tgcaacggaggccttccatcccaggcgtttgagtacatcaaat 338 ||||| || |||||||| || || || ||||| |||||||||| Sbjct: 681 tgcaatggtggccttccttctcaagcctttgaatacatcaaat 723
>gb|BT000674.1| Arabidopsis thaliana clone RAFL05-19-H13 (R10283) putative cysteine proteinase AALP (At5g60360) mRNA, complete cds Length = 1366 Score = 69.9 bits (35), Expect = 8e-09 Identities = 176/223 (78%) Strand = Plus / Plus Query: 116 aaagactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccattgcggctcc 175 ||||||||||| || ||||| ||||| || || |||||| | |||| ||| || || Sbjct: 498 aaagactggagagaagatggtatcgttagtccggtcaaagatcagggaggttgtggatct 557 Query: 176 tgctggacgttcagcactactggcgcacttgaggcagcatatactcaggccactggaaag 235 |||||||| |||||||| ||||| || ||||||||||| || |||||| |||||| Sbjct: 558 tgctggacattcagcacaactggagctcttgaggcagcttaccatcaggcatttggaaaa 617 Query: 236 aacatctctctttctgagcaacagctggttgactgtgctggtgggttcaataactttgga 295 || ||||| |||||||||||||| || || |||||||| | |||||||||| ||| Sbjct: 618 ggaatttctctctctgagcaacagcttgtggattgtgctggagctttcaataactatggt 677 Query: 296 tgcaacggaggccttccatcccaggcgtttgagtacatcaaat 338 ||||| || |||||||| || || || ||||| |||||||||| Sbjct: 678 tgcaatggtggccttccttctcaagcctttgaatacatcaaat 720
>gb|BT000673.1| Arabidopsis thaliana clone RAFL07-10-L02 (R10707) putative cysteine proteinase AALP (At5g60360) mRNA, complete cds Length = 1409 Score = 69.9 bits (35), Expect = 8e-09 Identities = 176/223 (78%) Strand = Plus / Plus Query: 116 aaagactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccattgcggctcc 175 ||||||||||| || ||||| ||||| || || |||||| | |||| ||| || || Sbjct: 505 aaagactggagagaagatggtatcgttagtccggtcaaagatcagggaggttgtggatct 564 Query: 176 tgctggacgttcagcactactggcgcacttgaggcagcatatactcaggccactggaaag 235 |||||||| |||||||| ||||| || ||||||||||| || |||||| |||||| Sbjct: 565 tgctggacattcagcacaactggagctcttgaggcagcttaccatcaggcatttggaaaa 624 Query: 236 aacatctctctttctgagcaacagctggttgactgtgctggtgggttcaataactttgga 295 || ||||| |||||||||||||| || || |||||||| | |||||||||| ||| Sbjct: 625 ggaatttctctctctgagcaacagcttgtggattgtgctggagctttcaataactatggt 684 Query: 296 tgcaacggaggccttccatcccaggcgtttgagtacatcaaat 338 ||||| || |||||||| || || || ||||| |||||||||| Sbjct: 685 tgcaatggtggccttccttctcaagcctttgaatacatcaaat 727
>emb|Z48736.1|LECYP3GN L.esculentum cyp-3 gene for pre-pro-cysteine proteinase Length = 1388 Score = 69.9 bits (35), Expect = 8e-09 Identities = 143/179 (79%) Strand = Plus / Plus Query: 167 tgcggctcctgctggacgttcagcactactggcgcacttgaggcagcatatactcaggcc 226 ||||| || |||||||| |||||||||||||| ||||| |||||||| ||| | || || Sbjct: 494 tgcggatcttgctggacattcagcactactggtgcactagaggcagcctatgcccaagca 553 Query: 227 actggaaagaacatctctctttctgagcaacagctggttgactgtgctggtgggttcaat 286 ||| ||| |||||||| || ||||| ||||| || ||||||||||| | || ||| Sbjct: 554 tttgggaagggaatctctctgtcagagcagcagcttgtggactgtgctggagcttttaat 613 Query: 287 aactttggatgcaacggaggccttccatcccaggcgtttgagtacatcaaatacaatgg 345 |||||||| ||||| ||||| | || || || || ||||||||||| |||| |||||| Sbjct: 614 aactttggttgcaatggagggttgccttctcaagcatttgagtacattaaattcaatgg 672
>gb|AF360273.1| Arabidopsis thaliana putative cysteine proteinase AALP (At5g60360) mRNA, complete cds Length = 1370 Score = 69.9 bits (35), Expect = 8e-09 Identities = 176/223 (78%) Strand = Plus / Plus Query: 116 aaagactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccattgcggctcc 175 ||||||||||| || ||||| ||||| || || |||||| | |||| ||| || || Sbjct: 472 aaagactggagagaagatggtatcgttagtccggtcaaagatcagggaggttgtggatct 531 Query: 176 tgctggacgttcagcactactggcgcacttgaggcagcatatactcaggccactggaaag 235 |||||||| |||||||| ||||| || ||||||||||| || |||||| |||||| Sbjct: 532 tgctggacattcagcacaactggagctcttgaggcagcttaccatcaggcatttggaaaa 591 Query: 236 aacatctctctttctgagcaacagctggttgactgtgctggtgggttcaataactttgga 295 || ||||| |||||||||||||| || || |||||||| | |||||||||| ||| Sbjct: 592 ggaatttctctctctgagcaacagcttgtggattgtgctggagctttcaataactatggt 651 Query: 296 tgcaacggaggccttccatcccaggcgtttgagtacatcaaat 338 ||||| || |||||||| || || || ||||| |||||||||| Sbjct: 652 tgcaatggtggccttccttctcaagcctttgaatacatcaaat 694
>emb|BX829791.1|CNS0A01S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB37ZD08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1282 Score = 69.9 bits (35), Expect = 8e-09 Identities = 176/223 (78%) Strand = Plus / Plus Query: 116 aaagactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccattgcggctcc 175 ||||||||||| || ||||| ||||| || || |||||| | |||| ||| || || Sbjct: 505 aaagactggagagaagatggtatcgttagtccggtcaaagatcagggaggttgtggatct 564 Query: 176 tgctggacgttcagcactactggcgcacttgaggcagcatatactcaggccactggaaag 235 |||||||| |||||||| ||||| || ||||||||||| || |||||| |||||| Sbjct: 565 tgctggacattcagcacaactggagctcttgaggcagcttaccatcaggcatttggaaaa 624 Query: 236 aacatctctctttctgagcaacagctggttgactgtgctggtgggttcaataactttgga 295 || ||||| |||||||||||||| || || |||||||| | |||||||||| ||| Sbjct: 625 ggaatttctctctctgagcaacagcttgtggattgtgctggagctttcaataactatggt 684 Query: 296 tgcaacggaggccttccatcccaggcgtttgagtacatcaaat 338 ||||| || |||||||| || || || ||||| |||||||||| Sbjct: 685 tgcaatggtggccttccttctcaagcctttgaatacatcaaat 727
>dbj|AB011483.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUF9 Length = 77298 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 242 tctctttctgagcaacagctggttgactgtgctggtgggttcaataactttggatgcaac 301 ||||| |||||||||||||| || || |||||||| | |||||||||| ||| ||||| Sbjct: 1852 tctctctctgagcaacagcttgtggattgtgctggagctttcaataactatggttgcaat 1911 Query: 302 ggaggccttccatcccaggcgtttgagtacatcaaat 338 || |||||||| || || || ||||| |||||||||| Sbjct: 1912 ggtggccttccttctcaagcctttgaatacatcaaat 1948
>gb|AF083703.1| Arabidopsis thaliana clone sps232 unknown mRNA Length = 1355 Score = 61.9 bits (31), Expect = 2e-06 Identities = 175/223 (78%) Strand = Plus / Plus Query: 116 aaagactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccattgcggctcc 175 ||||||||||| || ||||| ||||| || || |||||| | |||| ||| || || Sbjct: 498 aaagactggagagaagatggtatcgttagtccggtcaaagatcagggaggttgtggatct 557 Query: 176 tgctggacgttcagcactactggcgcacttgaggcagcatatactcaggccactggaaag 235 |||||||| |||||||| ||||| || ||||||||||| || |||||| |||||| Sbjct: 558 tgctggacattcagcacaactggagctcttgaggcagcttaccatcaggcatttggaaaa 617 Query: 236 aacatctctctttctgagcaacagctggttgactgtgctggtgggttcaataactttgga 295 || ||||| |||||||||||||| || || |||||||| | |||||||||| ||| Sbjct: 618 ggaatatctctctctgagcaacagcttgtggattgtgctggagctttcaataactatggt 677 Query: 296 tgcaacggaggccttccatcccaggcgtttgagtacatcaaat 338 ||||| || |||||||| || || || ||||| ||||| |||| Sbjct: 678 tgcaatggtggccttccttctcaagcctttgaatacataaaat 720
>gb|AY383240.1| Glycine max cysteine proteinase mRNA, partial cds Length = 937 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 239 atctctctttctgagcaacagctggttgactgtgctggtgggttcaataactttggatgc 298 ||||||||||||||||| ||||| || ||||||||||| ||||| |||||||| ||| Sbjct: 73 atctctctttctgagcagcagctagtggactgtgctggccctttcaacaactttggctgc 132 Query: 299 aacggaggccttccatcccaggcgtttgagtacatcaaatacaatgg 345 | || || | ||||| || || ||||||||||| ||||||||||| Sbjct: 133 catggtgggttgccatcacaagcctttgagtacattaaatacaatgg 179 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Plus Query: 491 gttcgcccagtgagtgtggcctttcaggtg 520 ||||| ||||| |||||||||||||||||| Sbjct: 325 gttcggccagttagtgtggcctttcaggtg 354
>gb|AY017412.1| Nicotiana tabacum NTCP23-like cysteine proteinase gene, complete cds Length = 2966 Score = 61.9 bits (31), Expect = 2e-06 Identities = 127/159 (79%) Strand = Plus / Plus Query: 187 cagcactactggcgcacttgaggcagcatatactcaggccactggaaagaacatctctct 246 |||||||||||| ||||| || |||||||||| || || ||| ||| |||||||| Sbjct: 2029 cagcactactggtgcactagaagcagcatatagccaagcatttgggaagggaatctctct 2088 Query: 247 ttctgagcaacagctggttgactgtgctggtgggttcaataactttggatgcaacggagg 306 |||||||| ||||| || ||||||||||| | || ||||||||||| ||||| || || Sbjct: 2089 atctgagcagcagcttgtggactgtgctggagcttttaataactttggctgcaatggtgg 2148 Query: 307 ccttccatcccaggcgtttgagtacatcaaatacaatgg 345 || ||||| || || |||||||| || |||| |||||| Sbjct: 2149 gctcccatcacaagcctttgagtatattaaatccaatgg 2187
>gb|AY088662.1| Arabidopsis thaliana clone 8989 mRNA, complete sequence Length = 1352 Score = 61.9 bits (31), Expect = 2e-06 Identities = 175/223 (78%) Strand = Plus / Plus Query: 116 aaagactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccattgcggctcc 175 ||||||||||| || ||||| ||||| || || |||||| | |||| ||| || || Sbjct: 512 aaagactggagagaagatggtatcgttagtccggtcaaagatcagggaggttgtggatct 571 Query: 176 tgctggacgttcagcactactggcgcacttgaggcagcatatactcaggccactggaaag 235 |||||||| |||||||| ||||| || ||||||||||| || |||||| |||||| Sbjct: 572 tgctggacattcagcacaactggagctcttgaggcagcttaccatcaggcatttggaaaa 631 Query: 236 aacatctctctttctgagcaacagctggttgactgtgctggtgggttcaataactttgga 295 || ||||| |||||||||||||| || || |||||||| | |||||||||| ||| Sbjct: 632 ggaatatctctctctgagcaacagcttgtggattgtgctggagctttcaataactatggt 691 Query: 296 tgcaacggaggccttccatcccaggcgtttgagtacatcaaat 338 ||||| || |||||||| || || || ||||| ||||| |||| Sbjct: 692 tgcaatggtggccttccttctcaagcctttgaatacataaaat 734
>gb|AF233883.1|AF233883 Arabidopsis thaliana AALP protein mRNA, complete cds Length = 1305 Score = 61.9 bits (31), Expect = 2e-06 Identities = 175/223 (78%) Strand = Plus / Plus Query: 116 aaagactggagggaggatgggatcgtcagccccgtcaaaaaccaggcccattgcggctcc 175 ||||||||||| || ||||| ||||| || || |||||| | |||| ||| || || Sbjct: 442 aaagactggagagaagatggtatcgttagtccggtcaaagatcagggaggttgtggatct 501 Query: 176 tgctggacgttcagcactactggcgcacttgaggcagcatatactcaggccactggaaag 235 |||||||| |||||||| ||||| || ||||||||||| || |||||| |||||| Sbjct: 502 tgctggacattcagcacaactggagctcttgaggcagcttaccatcaggcatttggaaaa 561 Query: 236 aacatctctctttctgagcaacagctggttgactgtgctggtgggttcaataactttgga 295 || ||||| |||||||||||||| || || |||||||| | |||||||||| ||| Sbjct: 562 ggaatatctctctctgagcaacagcttgtggattgtgctggagctttcaataactatggt 621 Query: 296 tgcaacggaggccttccatcccaggcgtttgagtacatcaaat 338 ||||| || |||||||| || || || ||||| ||||| |||| Sbjct: 622 tgcaatggtggccttccttctcaagcctttgaatacataaaat 664
>ref|NM_114400.2| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type peptidase AT3G45310 transcript variant AT3G45310.1 mRNA, complete cds Length = 1418 Score = 54.0 bits (27), Expect = 5e-04 Identities = 102/127 (80%) Strand = Plus / Plus Query: 251 gagcaacagctggttgactgtgctggtgggttcaataactttggatgcaacggaggcctt 310 ||||||||||| || || ||||||||| |||||||||||||| || | || || ||| Sbjct: 589 gagcaacagcttgtggattgtgctggtactttcaataactttggttgtcatggtggactt 648 Query: 311 ccatcccaggcgtttgagtacatcaaatacaatggcgggatcgacaccgaggagtcctac 370 || || || || ||||| ||||| |||||||| || ||| ||||||| |||||| | || Sbjct: 649 ccttctcaagcctttgaatacattaaatacaacggtgggctcgacacggaggaggcttat 708 Query: 371 ccttaca 377 ||||||| Sbjct: 709 ccttaca 715 Score = 48.1 bits (24), Expect = 0.030 Identities = 48/56 (85%) Strand = Plus / Plus Query: 464 gatgaactgaagaacgccgttgggttggttcgcccagtgagtgtggcctttcaggt 519 |||||||||||| |||| || |||||||| | |||||||||||||| ||| |||| Sbjct: 802 gatgaactgaagcacgcggtcgggttggtaaggccagtgagtgtggcgtttgaggt 857
>ref|NM_001035735.1| Arabidopsis thaliana cysteine-type endopeptidase/ cysteine-type peptidase AT3G45310 transcript variant AT3G45310.2 mRNA, complete cds Length = 1442 Score = 54.0 bits (27), Expect = 5e-04 Identities = 102/127 (80%) Strand = Plus / Plus Query: 251 gagcaacagctggttgactgtgctggtgggttcaataactttggatgcaacggaggcctt 310 ||||||||||| || || ||||||||| |||||||||||||| || | || || ||| Sbjct: 616 gagcaacagcttgtggattgtgctggtactttcaataactttggttgtcatggtggactt 675 Query: 311 ccatcccaggcgtttgagtacatcaaatacaatggcgggatcgacaccgaggagtcctac 370 || || || || ||||| ||||| |||||||| || ||| ||||||| |||||| | || Sbjct: 676 ccttctcaagcctttgaatacattaaatacaacggtgggctcgacacggaggaggcttat 735 Query: 371 ccttaca 377 ||||||| Sbjct: 736 ccttaca 742 Score = 48.1 bits (24), Expect = 0.030 Identities = 48/56 (85%) Strand = Plus / Plus Query: 464 gatgaactgaagaacgccgttgggttggttcgcccagtgagtgtggcctttcaggt 519 |||||||||||| |||| || |||||||| | |||||||||||||| ||| |||| Sbjct: 829 gatgaactgaagcacgcggtcgggttggtaaggccagtgagtgtggcgtttgaggt 884
>emb|AL132953.2|ATF18N11 Arabidopsis thaliana DNA chromosome 3, BAC clone F18N11 Length = 91274 Score = 54.0 bits (27), Expect = 5e-04 Identities = 102/127 (80%) Strand = Plus / Minus Query: 251 gagcaacagctggttgactgtgctggtgggttcaataactttggatgcaacggaggcctt 310 ||||||||||| || || ||||||||| |||||||||||||| || | || || ||| Sbjct: 60151 gagcaacagcttgtggattgtgctggtactttcaataactttggttgtcatggtggactt 60092 Query: 311 ccatcccaggcgtttgagtacatcaaatacaatggcgggatcgacaccgaggagtcctac 370 || || || || ||||| ||||| |||||||| || ||| ||||||| |||||| | || Sbjct: 60091 ccttctcaagcctttgaatacattaaatacaacggtgggctcgacacggaggaggcttat 60032 Query: 371 ccttaca 377 ||||||| Sbjct: 60031 ccttaca 60025 Score = 48.1 bits (24), Expect = 0.030 Identities = 48/56 (85%) Strand = Plus / Minus Query: 464 gatgaactgaagaacgccgttgggttggttcgcccagtgagtgtggcctttcaggt 519 |||||||||||| |||| || |||||||| | |||||||||||||| ||| |||| Sbjct: 59861 gatgaactgaagcacgcggtcgggttggtaaggccagtgagtgtggcgtttgaggt 59806
>gb|AY091771.1| Arabidopsis thaliana AT3g45310/F18N11_70 mRNA, complete cds Length = 1402 Score = 54.0 bits (27), Expect = 5e-04 Identities = 102/127 (80%) Strand = Plus / Plus Query: 251 gagcaacagctggttgactgtgctggtgggttcaataactttggatgcaacggaggcctt 310 ||||||||||| || || ||||||||| |||||||||||||| || | || || ||| Sbjct: 587 gagcaacagcttgtggattgtgctggtactttcaataactttggttgtcatggtggactt 646 Query: 311 ccatcccaggcgtttgagtacatcaaatacaatggcgggatcgacaccgaggagtcctac 370 || || || || ||||| ||||| |||||||| || ||| ||||||| |||||| | || Sbjct: 647 ccttctcaagcctttgaatacattaaatacaacggtgggctcgacacggaggaggcttat 706 Query: 371 ccttaca 377 ||||||| Sbjct: 707 ccttaca 713 Score = 48.1 bits (24), Expect = 0.030 Identities = 48/56 (85%) Strand = Plus / Plus Query: 464 gatgaactgaagaacgccgttgggttggttcgcccagtgagtgtggcctttcaggt 519 |||||||||||| |||| || |||||||| | |||||||||||||| ||| |||| Sbjct: 800 gatgaactgaagcacgcggtcgggttggtaaggccagtgagtgtggcgtttgaggt 855
>gb|AF019147.1|AF019147 Zea mays cysteine proteinase Mir3 (mir3) mRNA, complete cds Length = 1830 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 320 gcgtttgagtacatcaaatacaatggcgggatcgacaccgaggagtcctacccttacaag 379 |||||||||| ||||| |||||||||| |||||||||||| || |||||||||||| Sbjct: 717 gcgtttgagttcatcatcaacaatggcggaatcgacaccgagaaggattacccttacaag 776 Query: 380 gg 381 || Sbjct: 777 gg 778
>dbj|AB020492.1| Haemaphysalis longicornis mRNA for cathepsin L-like tick cysteine proteinase A, complete cds Length = 1142 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 149 gtcaaaaaccaggcccattgcggctcctgctggacgttcagcactactgg 198 ||||| ||||||| ||| ||||||||||||||| | |||||||| ||||| Sbjct: 456 gtcaagaaccagggccagtgcggctcctgctgggcattcagcaccactgg 505
>gb|AY336798.1| Rhipicephalus haemaphysaloides haemaphysaloides cathepsin L-like cysteine proteinase B (CysB) mRNA, complete cds Length = 1153 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 149 gtcaaaaaccaggcccattgcggctcctgctggacgttcagcactac 195 ||||| ||||||| || ||||||||||||||| | ||||||||||| Sbjct: 442 gtcaagaaccagggacagtgcggctcctgctgggcattcagcactac 488
>emb|Z92812.1|CET03E6 Caenorhabditis elegans Cosmid T03E6, complete sequence Length = 28082 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Minus Query: 351 tcgacaccgaggagtcctacccttacaaggg 381 |||||||||||||||| ||||| |||||||| Sbjct: 18530 tcgacaccgaggagtcatacccatacaaggg 18500
>emb|CR660840.2|CNS0F8VI Tetraodon nigroviridis full-length cDNA Length = 1326 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 139 cgtcagccccgtcaaaaaccaggcccattgcggctcctgctggacgttcagcact 193 ||||| |||||||||| |||||| || || |||||||||||| | ||||||||| Sbjct: 445 cgtcacccccgtcaaagaccagggtcagtgtggctcctgctgggccttcagcact 499
>ref|NM_074798.3| Caenorhabditis elegans CathePsin L family member (cpl-1) (cpl-1) mRNA, complete cds Length = 1192 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 351 tcgacaccgaggagtcctacccttacaaggg 381 |||||||||||||||| ||||| |||||||| Sbjct: 608 tcgacaccgaggagtcatacccatacaaggg 638
>gb|AY208824.1| Rhipicephalus appendiculatus midgut cysteine proteinase 5 mRNA, complete cds Length = 1160 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 156 accaggcccattgcggctcctgctggacgttcagcactactgg 198 |||||| ||| ||||||||||||||| | |||||| ||||||| Sbjct: 454 accagggccagtgcggctcctgctgggccttcagcgctactgg 496
>gb|AY208823.1| Rhipicephalus appendiculatus midgut cysteine proteinase 4 mRNA, complete cds Length = 1169 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 149 gtcaaaaaccaggcccattgcggctcctgctggacgttcagcactac 195 ||||| ||||||| ||| ||||||||||||||| | |||||| |||| Sbjct: 458 gtcaagaaccagggccagtgcggctcctgctgggcattcagctctac 504
>dbj|AB099890.1| Oryzias latipes ctsL mRNA for cathepsin L, complete cds Length = 1369 Score = 46.1 bits (23), Expect = 0.12 Identities = 53/63 (84%) Strand = Plus / Plus Query: 139 cgtcagccccgtcaaaaaccaggcccattgcggctcctgctggacgttcagcactactgg 198 ||||| ||||||||| |||||| || ||||||||||||||| | |||||||| || || Sbjct: 397 cgtcacccccgtcaaggaccagggtcagtgcggctcctgctgggccttcagcaccaccgg 456 Query: 199 cgc 201 ||| Sbjct: 457 cgc 459
>dbj|AB020961.1| Zea mays mRNA for cysteine protease component of protease-inhibitor complex, complete cds Length = 1828 Score = 46.1 bits (23), Expect = 0.12 Identities = 38/43 (88%) Strand = Plus / Plus Query: 339 acaatggcgggatcgacaccgaggagtcctacccttacaaggg 381 |||||||||| |||||||||||| || |||||||||||||| Sbjct: 735 acaatggcggaatcgacaccgagaaggattacccttacaaggg 777
>gb|AY336797.1| Rhipicephalus haemaphysaloides haemaphysaloides cathepsin L-like cysteine proteinase A (CysA) mRNA, complete cds Length = 1168 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 156 accaggcccattgcggctcctgctggacgttcag 189 |||||| ||| ||||||||||||||| ||||||| Sbjct: 455 accagggccagtgcggctcctgctgggcgttcag 488
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 gcgacccgtctcggcgcggcgc 50 |||||||||||||||||||||| Sbjct: 2597144 gcgacccgtctcggcgcggcgc 2597165
>emb|CR729959.2|CNS0GQ6L Tetraodon nigroviridis full-length cDNA Length = 1415 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Plus Query: 139 cgtcagccccgtcaaaaaccaggcccattgcggctcctgctggacgttcagcac 192 ||||| |||||||||| |||||| || || |||||||||||| | |||||||| Sbjct: 391 cgtcacccccgtcaaagaccagggtcagtgtggctcctgctgggccttcagcac 444
>emb|CR725293.2|CNS0GMKZ Tetraodon nigroviridis full-length cDNA Length = 1497 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Plus Query: 139 cgtcagccccgtcaaaaaccaggcccattgcggctcctgctggacgttcagcac 192 ||||| |||||||||| |||||| || || |||||||||||| | |||||||| Sbjct: 456 cgtcacccccgtcaaagaccagggtcagtgtggctcctgctgggccttcagcac 509
>emb|CR724591.2|CNS0GM1H Tetraodon nigroviridis full-length cDNA Length = 1486 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Plus Query: 139 cgtcagccccgtcaaaaaccaggcccattgcggctcctgctggacgttcagcac 192 ||||| |||||||||| |||||| || || |||||||||||| | |||||||| Sbjct: 454 cgtcacccccgtcaaagaccagggtcagtgtggctcctgctgggccttcagcac 507
>emb|CR650366.2|CNS0F0SK Tetraodon nigroviridis full-length cDNA Length = 1420 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Plus Query: 139 cgtcagccccgtcaaaaaccaggcccattgcggctcctgctggacgttcagcac 192 ||||| |||||||||| |||||| || || |||||||||||| | |||||||| Sbjct: 392 cgtcacccccgtcaaagaccagggtcagtgtggctcctgctgggccttcagcac 445
>emb|CR647255.2|CNS0EYE5 Tetraodon nigroviridis full-length cDNA Length = 1453 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Plus Query: 139 cgtcagccccgtcaaaaaccaggcccattgcggctcctgctggacgttcagcac 192 ||||| |||||||||| |||||| || || |||||||||||| | |||||||| Sbjct: 421 cgtcacccccgtcaaagaccagggtcagtgtggctcctgctgggccttcagcac 474
>emb|CR639173.3|CNS0ES5N Tetraodon nigroviridis full-length cDNA Length = 1142 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Plus Query: 139 cgtcagccccgtcaaaaaccaggcccattgcggctcctgctggacgttcagcac 192 ||||| |||||||||| |||||| || || |||||||||||| | |||||||| Sbjct: 257 cgtcacccccgtcaaagaccagggtcagtgtggctcctgctgggccttcagcac 310
>gb|AY373973.1| Helicoverpa armigera cathepsin L-like protease mRNA, complete cds Length = 1540 Score = 44.1 bits (22), Expect = 0.47 Identities = 40/46 (86%) Strand = Plus / Plus Query: 327 agtacatcaaatacaatggcgggatcgacaccgaggagtcctaccc 372 |||||||||| |||| ||||| |||||||||||| || ||||||| Sbjct: 751 agtacatcaaggacaacggcggcatcgacaccgagaaggcctaccc 796
>gb|AY208822.1| Rhipicephalus appendiculatus midgut cysteine proteinase 3 mRNA, complete cds Length = 1144 Score = 44.1 bits (22), Expect = 0.47 Identities = 34/38 (89%) Strand = Plus / Plus Query: 155 aaccaggcccattgcggctcctgctggacgttcagcac 192 ||||||| ||| ||||||||||||||| | |||||||| Sbjct: 443 aaccagggccagtgcggctcctgctgggccttcagcac 480
>gb|AY103676.1| Zea mays PCO102242 mRNA sequence Length = 1878 Score = 44.1 bits (22), Expect = 0.47 Identities = 52/62 (83%) Strand = Plus / Plus Query: 320 gcgtttgagtacatcaaatacaatggcgggatcgacaccgaggagtcctacccttacaag 379 |||||||||| ||||| |||| ||||| |||||||||||| || |||||||||||| Sbjct: 752 gcgtttgagttcatcatcaacaacggcggaatcgacaccgagaaggattacccttacaag 811 Query: 380 gg 381 || Sbjct: 812 gg 813
>ref|NM_196299.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0068A07.11), mRNA Length = 516 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 acgccgccgcgctcccggaga 113 ||||||||||||||||||||| Sbjct: 326 acgccgccgcgctcccggaga 346
>gb|AC068473.19| Homo sapiens chromosome 18, clone RP11-567M16, complete sequence Length = 175721 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atctctctttctgagcaacag 259 ||||||||||||||||||||| Sbjct: 109648 atctctctttctgagcaacag 109668
>emb|CR725700.2|CNS0GMWA Tetraodon nigroviridis full-length cDNA Length = 1282 Score = 42.1 bits (21), Expect = 1.9 Identities = 72/89 (80%) Strand = Plus / Plus Query: 254 caacagctggttgactgtgctggtgggttcaataactttggatgcaacggaggccttcca 313 ||||||||||| |||||||| | | ||||| ||| ||| ||||||||||| || || Sbjct: 509 caacagctggtggactgtgcgtgggacttcaacaaccatgggtgcaacggaggtctaccg 568 Query: 314 tcccaggcgtttgagtacatcaaatacaa 342 ||| |||||||| |||||||||||||| Sbjct: 569 agccaagcgtttgaatacatcaaatacaa 597
>emb|CR724005.2|CNS0GLL7 Tetraodon nigroviridis full-length cDNA Length = 859 Score = 42.1 bits (21), Expect = 1.9 Identities = 72/89 (80%) Strand = Plus / Plus Query: 254 caacagctggttgactgtgctggtgggttcaataactttggatgcaacggaggccttcca 313 ||||||||||| |||||||| | | ||||| ||| ||| ||||||||||| || || Sbjct: 84 caacagctggtggactgtgcgtgggacttcaacaaccatgggtgcaacggaggtctaccg 143 Query: 314 tcccaggcgtttgagtacatcaaatacaa 342 ||| |||||||| |||||||||||||| Sbjct: 144 agccaagcgtttgaatacatcaaatacaa 172
>emb|CR723850.2|CNS0GLGW Tetraodon nigroviridis full-length cDNA Length = 1275 Score = 42.1 bits (21), Expect = 1.9 Identities = 72/89 (80%) Strand = Plus / Plus Query: 254 caacagctggttgactgtgctggtgggttcaataactttggatgcaacggaggccttcca 313 ||||||||||| |||||||| | | ||||| ||| ||| ||||||||||| || || Sbjct: 504 caacagctggtggactgtgcgtgggacttcaacaaccatgggtgcaacggaggtctaccg 563 Query: 314 tcccaggcgtttgagtacatcaaatacaa 342 ||| |||||||| |||||||||||||| Sbjct: 564 agccaagcgtttgaatacatcaaatacaa 592
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 acgccgccgcgctcccggaga 113 ||||||||||||||||||||| Sbjct: 75290 acgccgccgcgctcccggaga 75270
>gb|AC182764.2| Gallus gallus BAC clone CH261-140B3 from chromosome 1, complete sequence Length = 192460 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 114 ccaaagactggagggaggatg 134 ||||||||||||||||||||| Sbjct: 65906 ccaaagactggagggaggatg 65926
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 acgccgccgcgctcccggaga 113 ||||||||||||||||||||| Sbjct: 12555203 acgccgccgcgctcccggaga 12555183 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ggacgccgccgcgctcccgg 110 |||||||||||||||||||| Sbjct: 15313914 ggacgccgccgcgctcccgg 15313933
>gb|AC006144.1|AC006144 Homo sapiens PAC clone RP1-296G17 from Xq23, complete sequence Length = 81184 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 cagtaaacatcacactgaatg 458 ||||||||||||||||||||| Sbjct: 57193 cagtaaacatcacactgaatg 57173
>dbj|AK061602.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G06, full insert sequence Length = 924 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 acgccgccgcgctcccggaga 113 ||||||||||||||||||||| Sbjct: 433 acgccgccgcgctcccggaga 453
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 acgccgccgcgctcccggaga 113 ||||||||||||||||||||| Sbjct: 12562543 acgccgccgcgctcccggaga 12562523 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ggacgccgccgcgctcccgg 110 |||||||||||||||||||| Sbjct: 15322155 ggacgccgccgcgctcccgg 15322174
>ref|XM_474131.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1377 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 339 acaatggcgggatcgacaccgaggagtcctacccttacaa 378 ||||||| || |||||||||||||| |||||||||||| Sbjct: 617 acaatggtggaatcgacaccgaggatgactacccttacaa 656
>ref|NM_196696.1| Oryza sativa (japonica cultivar-group) putative metal-binding protein (OSJNBa0046P18.5), mRNA Length = 1080 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ggacgccgccgcgctcccgg 110 |||||||||||||||||||| Sbjct: 621 ggacgccgccgcgctcccgg 640
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 gcggcgcagacctgctcggc 63 |||||||||||||||||||| Sbjct: 331232 gcggcgcagacctgctcggc 331213
>emb|AJ246003.1|HSA246003 Homo sapiens Spast gene for spastin protein Length = 110000 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 ccagtgagtgtggcctttca 516 |||||||||||||||||||| Sbjct: 77852 ccagtgagtgtggcctttca 77871
>gb|AF483210.1| Canis familiaris polycystin-1 (PKD1) gene, partial cds Length = 39089 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 acctcatgcgggacgccgcc 100 |||||||||||||||||||| Sbjct: 5170 acctcatgcgggacgccgcc 5151
>ref|XM_682929.1| PREDICTED: Danio rerio similar to cathepsin K preproprotein (LOC559573), mRNA Length = 1581 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 tgcggctcctgctggacgttcagc 190 ||||||||||||||| |||||||| Sbjct: 496 tgcggctcctgctgggcgttcagc 519
>emb|BX248517.10| Zebrafish DNA sequence from clone DKEY-30O16 in linkage group 16, complete sequence Length = 201353 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 tgcggctcctgctggacgttcagc 190 ||||||||||||||| |||||||| Sbjct: 79838 tgcggctcctgctgggcgttcagc 79861
>ref|NM_001017778.1| Danio rerio zgc:110367 (zgc:110367), mRNA Length = 1595 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 tgcggctcctgctggacgttcagc 190 ||||||||||||||| |||||||| Sbjct: 493 tgcggctcctgctgggcgttcagc 516
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 339 acaatggcgggatcgacaccgaggagtcctacccttacaa 378 ||||||| || |||||||||||||| |||||||||||| Sbjct: 33159164 acaatggtggaatcgacaccgaggatgactacccttacaa 33159125
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctgggaggagttccaggcga 32 |||||||||||||||||||| Sbjct: 21873069 ctgggaggagttccaggcga 21873088
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ggacgccgccgcgctcccgg 110 |||||||||||||||||||| Sbjct: 31277 ggacgccgccgcgctcccgg 31296
>gb|BC092901.1| Danio rerio zgc:110367, mRNA (cDNA clone MGC:110367 IMAGE:7404526), complete cds Length = 1595 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 tgcggctcctgctggacgttcagc 190 ||||||||||||||| |||||||| Sbjct: 493 tgcggctcctgctgggcgttcagc 516
>dbj|AP005460.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0610D01 Length = 146418 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctgggaggagttccaggcga 32 |||||||||||||||||||| Sbjct: 131150 ctgggaggagttccaggcga 131169
>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0006A22 Length = 190690 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ctgggaggagttccaggcga 32 |||||||||||||||||||| Sbjct: 95554 ctgggaggagttccaggcga 95573
>emb|AL954306.10| Zebrafish DNA sequence from clone CH211-113G11 in linkage group 16, complete sequence Length = 169830 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 tgcggctcctgctggacgttcagc 190 ||||||||||||||| |||||||| Sbjct: 154265 tgcggctcctgctgggcgttcagc 154288
>dbj|AK121500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022A11, full insert sequence Length = 752 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 339 acaatggcgggatcgacaccgaggagtcctacccttacaa 378 ||||||| || |||||||||||||| |||||||||||| Sbjct: 682 acaatggtggaatcgacaccgaggatgactacccttacaa 721
>dbj|AK098910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H09, full insert sequence Length = 1753 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 339 acaatggcgggatcgacaccgaggagtcctacccttacaa 378 ||||||| || |||||||||||||| |||||||||||| Sbjct: 682 acaatggtggaatcgacaccgaggatgactacccttacaa 721
>dbj|AK071913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065M08, full insert sequence Length = 1774 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 339 acaatggcgggatcgacaccgaggagtcctacccttacaa 378 ||||||| || |||||||||||||| |||||||||||| Sbjct: 682 acaatggtggaatcgacaccgaggatgactacccttacaa 721
>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete sequence Length = 118971 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 339 acaatggcgggatcgacaccgaggagtcctacccttacaa 378 ||||||| || |||||||||||||| |||||||||||| Sbjct: 49557 acaatggtggaatcgacaccgaggatgactacccttacaa 49518
>emb|AL121658.4|CNS01DS8 BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 563N04 of library RPCI-11 from chromosome 2 of Homo sapiens (Human) Length = 162692 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 497 ccagtgagtgtggcctttca 516 |||||||||||||||||||| Sbjct: 59112 ccagtgagtgtggcctttca 59131
>dbj|D90406.1|RICOZA Oryza sativa (japonica cultivar-group) mRNA for oryzain alpha, complete cds Length = 1929 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 339 acaatggcgggatcgacaccgaggagtcctacccttacaa 378 ||||||| || |||||||||||||| |||||||||||| Sbjct: 662 acaatggtggaatcgacaccgaggatgactacccttacaa 701
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 47 gcgcagacctgctcggcgacgctcgccg 74 |||| |||| |||||||||||||||||| Sbjct: 2661839 gcgcggaccggctcggcgacgctcgccg 2661812
>gb|AC153617.3| Mus musculus 6 BAC RP23-177G20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199525 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gaaagaacatctctctttct 250 |||||||||||||||||||| Sbjct: 89115 gaaagaacatctctctttct 89134
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 40.1 bits (20), Expect = 7.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 339 acaatggcgggatcgacaccgaggagtcctacccttacaa 378 ||||||| || |||||||||||||| |||||||||||| Sbjct: 41814 acaatggtggaatcgacaccgaggatgactacccttacaa 41775 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,389,605 Number of Sequences: 3902068 Number of extensions: 4389605 Number of successful extensions: 74139 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 73497 Number of HSP's gapped (non-prelim): 617 length of query: 545 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 522 effective length of database: 17,143,297,704 effective search space: 8948801401488 effective search space used: 8948801401488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
