>SRBP2_CRIGR (Q60429) Sterol regulatory element-binding protein 2 (SREBP-2)|
           (Sterol regulatory element-binding transcription factor
           2)
          Length = 1139

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 9/55 (16%)
 Frame = +1

Query: 307 PDLTALTTKIHEGA----ALYTTGGKITTSMPXMLG-----VSMCQELMKKMAPP 444
           P LTALTT +  GA     L  + G I T+MP M+G     +      +K++ PP
Sbjct: 270 PALTALTTPLQTGALQVPTLVGSNGTILTTMPVMMGQEKVPIKQVPGGVKQLEPP 324

>Y4KF_RHISN (P55526) Hypothetical 47.4 kDa protein y4kF|
          Length = 434

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -2

Query: 480 NVGLGKLHPHGGRWRHL-LHQLLAHGDAEHXRHRRRDLAP 364
           + G G    HGGR RH+  H+   HG +E    RRRD  P
Sbjct: 364 DTGYGGFGAHGGRNRHIDEHRFRIHG-SESRSDRRRDACP 402

>SRBP2_HUMAN (Q12772) Sterol regulatory element-binding protein 2 (SREBP-2)|
           (Sterol regulatory element-binding transcription factor
           2)
          Length = 1141

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
 Frame = +1

Query: 307 PDLTALTTKIHEGA----ALYTTGGKITTSMPXMLG-----VSMCQELMKKMAPP 444
           P LTALTT I   A     L  + G I T+MP M+G     +      +K++ PP
Sbjct: 272 PALTALTTPIQTAALQVPTLVGSSGTILTTMPVMMGQEKVPIKQVPGGVKQLEPP 326

>CY11_SOLTU (P25076) Cytochrome c1, heme protein, mitochondrial precursor|
           (Clone PC13III)
          Length = 320

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 22/97 (22%), Positives = 31/97 (31%), Gaps = 27/97 (27%)
 Frame = +1

Query: 136 QRGQKVFMQVCAGCHVM--LPYAGVPAAAQGEVRXXXXXXXXX----------------- 258
           +RG +V+ QVCA CH M  + Y  +   A  E                            
Sbjct: 106 RRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGK 165

Query: 259 --------XXXXXXXXXQSGGSYTPDLTALTTKIHEG 345
                             +GG+Y PDL+ +T   H G
Sbjct: 166 LSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNG 202

>SPRT_PHOLL (Q7N118) Protein sprT|
          Length = 194

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 17/71 (23%), Positives = 30/71 (42%)
 Frame = -2

Query: 468 GKLHPHGGRWRHLLHQLLAHGDAEHXRHRRRDLAPRGVQSRTFMDFCGESGEVRRVRASG 289
           GK+ PHG +WR ++ ++L         +R        V+S+TF  +C        +R   
Sbjct: 90  GKVPPHGKQWRWMMEEVL-----NVPANRTHKFKIDSVRSQTFTYYCNCQQHELTLRRHN 144

Query: 288 LGSRSRHRFLC 256
              R    ++C
Sbjct: 145 KILRGESHYIC 155

>CY12_SOLTU (P29610) Cytochrome c1, heme protein, mitochondrial precursor|
           (Clone PC18I) (Fragment)
          Length = 260

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 136 QRGQKVFMQVCAGCHVM 186
           +RG +V+ QVCA CH M
Sbjct: 46  RRGHQVYQQVCASCHSM 62


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,845,712
Number of Sequences: 219361
Number of extensions: 864116
Number of successful extensions: 2964
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2960
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)