| Clone Name | basd21g18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118924 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 118865 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118864 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 118805 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118804 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 118745 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 118744 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 118707 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96232 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 96291 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96292 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 96351 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96352 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 96411 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 96412 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 96449
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118924 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 118865 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118864 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 118805 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118804 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 118745 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 118744 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 118707 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96232 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 96291 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96292 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 96351 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96352 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 96411 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 96412 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 96449
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118873 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 118814 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118813 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 118754 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118753 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 118694 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 118693 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 118656 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96177 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 96236 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96237 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 96296 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96297 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 96356 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 96357 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 96394
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508810 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 31508869 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508870 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 31508929 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508930 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 31508989 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 31508990 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 31509027 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513292 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 11513233 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513232 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 11513173 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513172 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 11513113 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 11513112 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 11513075 Score = 272 bits (137), Expect = 4e-70 Identities = 140/141 (99%) Strand = Plus / Minus Query: 78 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 138 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 198 atgcataggtaggggagcgtt 218 |||||| |||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgtt 27320523 Score = 115 bits (58), Expect = 6e-23 Identities = 61/62 (98%) Strand = Plus / Minus Query: 5 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 64 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 25722165 aaacagcccggatcaccagctaaggcccctaaatgaccgcttagtgataaaggaggtggg 25722106 Query: 65 gg 66 || Sbjct: 25722105 gg 25722104 Score = 63.9 bits (32), Expect = 2e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggccc 32 |||||||||||||||||||||||||||||||| Sbjct: 28582259 agggaaacagcccggatcaccagctaaggccc 28582290
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83786 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 83727 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83726 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 83667 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83666 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 83607 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 83606 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 83569
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 362 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 302 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 242 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 241 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 204
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118893 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 118834 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118833 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 118774 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118773 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 118714 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 118713 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 118676 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96225 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 96284 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96285 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 96344 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96345 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 96404 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 96405 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 96442
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123273 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 123332 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123333 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 123392 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123393 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 123452 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 123453 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 123490 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14999 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 15058 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15059 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 15118 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15119 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 15178 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 15179 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 15216
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141807 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 141866 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141867 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 141926 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141927 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 141986 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 141987 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 142024
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43883 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 43824 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43823 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 43764 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43763 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 43704 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 43703 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 43666 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21234 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 21293 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21294 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 21353 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21354 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 21413 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 21414 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 21451
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63864 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 63805 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63804 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 63745 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63744 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 63685 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 63684 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 63647
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 513 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 454 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 394 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 334 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 333 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 296
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269159 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 9269218 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269219 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 9269278 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269279 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 9269338 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 9269339 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 9269376 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228659 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 9228718 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228719 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 9228778 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228779 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 9228838 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 9228839 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 9228876 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165247 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 9165306 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165307 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 9165366 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165367 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 9165426 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 9165427 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 9165464 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057073 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 9057132 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057133 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 9057192 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057193 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 9057252 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 9057253 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 9057290
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939144 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 19939203 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939204 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 19939263 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939264 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 19939323 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 19939324 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 19939361 Score = 416 bits (210), Expect = e-113 Identities = 216/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388011 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 10388070 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388071 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 10388130 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388131 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 10388190 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||| ||||||| Sbjct: 10388191 agctgtgggatgtcaaaatgcatcggtaggagagcgtt 10388228 Score = 416 bits (210), Expect = e-113 Identities = 216/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276287 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 10276228 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276227 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 10276168 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10276167 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccga 10276108 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 10276107 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 10276070 Score = 77.8 bits (39), Expect = 1e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 132 gatcgagcgcccttgcgctgaagatgaacggggctaagc 170 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 48.1 bits (24), Expect = 0.011 Identities = 51/60 (85%) Strand = Plus / Minus Query: 73 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 132 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241122 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 9241063 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241062 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 9241003 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241002 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 9240943 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 9240942 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 9240905 Score = 109 bits (55), Expect = 4e-21 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 20 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 73 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 74 acagccaggaggtttgcctagaagcagccaccctttaaagag 115 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 52.0 bits (26), Expect = 7e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||| |||||| ||||||||||| |||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgtt 3580248 Score = 48.1 bits (24), Expect = 0.011 Identities = 36/40 (90%) Strand = Plus / Minus Query: 145 tgcgctgaagatgaacggggctaagcgatctgccgaagct 184 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 2.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 19 accagctaaggcccctaaatgaccgctcagtgataaagga 58 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599326 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 31599385 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599386 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 31599445 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599446 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 31599505 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 31599506 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 31599543 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510055 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 11509996 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509995 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 11509936 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509935 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 11509876 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 11509875 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 11509838 Score = 272 bits (137), Expect = 4e-70 Identities = 140/141 (99%) Strand = Plus / Minus Query: 78 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 138 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 198 atgcataggtaggggagcgtt 218 |||||| |||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgtt 27411846 Score = 115 bits (58), Expect = 6e-23 Identities = 61/62 (98%) Strand = Plus / Minus Query: 5 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 64 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 25813474 aaacagcccggatcaccagctaaggcccctaaatgaccgcttagtgataaaggaggtggg 25813415 Query: 65 gg 66 || Sbjct: 25813414 gg 25813413 Score = 63.9 bits (32), Expect = 2e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggccc 32 |||||||||||||||||||||||||||||||| Sbjct: 28673583 agggaaacagcccggatcaccagctaaggccc 28673614
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526642 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 33526701 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526702 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 33526761 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526762 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 33526821 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 33526822 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 33526859 Score = 333 bits (168), Expect = 1e-88 Identities = 195/204 (95%), Gaps = 5/204 (2%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527767 agggaaacagcctggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 527826 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct: 527827 tgggggtgcaaagac-----ggaggtttgcctaaaagcagccaccctttaaagagtgcgt 527881 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 527882 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccaa 527941 Query: 181 agctgtgggatgtcaaaatgcata 204 ||||||||||||||||||| |||| Sbjct: 527942 agctgtgggatgtcaaaatacata 527965 Score = 67.9 bits (34), Expect = 1e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 132 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 173 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46899 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 46840 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46839 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 46780 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46779 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 46720 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 46719 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 46682
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71839 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 71898 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71899 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 71958 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71959 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 72018 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 72019 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 72056
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122723 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 122664 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122663 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 122604 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122603 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 122544 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 122543 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 122506 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100114 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 100173 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100174 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 100233 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100234 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 100293 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 100294 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 100331
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52335 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 52276 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52275 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 52216 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52215 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 52156 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 52155 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 52118
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 611 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 670 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 671 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 730 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 731 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 790 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 791 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 828
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 140 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 200 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 260 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 261 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 298
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 806 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 865 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 866 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 925 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 926 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 985 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 986 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 1023
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 80 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 140 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 200 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 201 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 238
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 736 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 796 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 856 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 857 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 894
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 867 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 927 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 987 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 988 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 1025
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 486 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 546 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 606 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 607 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 644
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 686 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 687 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 746 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 806 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 807 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 844
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 806 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 865 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 866 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 925 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 926 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 985 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 986 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 1023
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 488 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 548 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 549 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 608 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 609 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 646
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950420 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 19950479 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950480 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 19950539 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950540 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 19950599 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 19950600 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 19950637 Score = 416 bits (210), Expect = e-113 Identities = 216/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394050 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 10394109 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394110 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 10394169 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394170 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 10394229 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||| ||||||| Sbjct: 10394230 agctgtgggatgtcaaaatgcatcggtaggagagcgtt 10394267 Score = 416 bits (210), Expect = e-113 Identities = 216/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282326 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 10282267 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282266 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 10282207 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10282206 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccga 10282147 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 10282146 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 10282109 Score = 77.8 bits (39), Expect = 1e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 132 gatcgagcgcccttgcgctgaagatgaacggggctaagc 170 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 48.1 bits (24), Expect = 0.011 Identities = 51/60 (85%) Strand = Plus / Minus Query: 73 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 132 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123440 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 123381 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123380 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 123321 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123320 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 123261 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 123260 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 123223 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100791 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 100850 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100851 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 100910 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100911 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 100970 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 100971 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 101008
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118867 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 118808 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118807 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 118748 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118747 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 118688 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 118687 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 118650 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96172 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 96231 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96232 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 96291 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96292 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 96351 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 96352 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 96389
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119059 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 119000 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118999 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 118940 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118939 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 118880 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 118879 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 118842 Score = 424 bits (214), Expect = e-116 Identities = 217/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95835 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 95894 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95895 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 95954 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95955 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 96014 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 96015 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 96052
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 416 bits (210), Expect = e-113 Identities = 216/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117840 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 117781 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117780 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 117721 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 117720 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccga 117661 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 117660 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 117623
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 416 bits (210), Expect = e-113 Identities = 216/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94403 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 94462 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94463 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 94522 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94523 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 94582 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||| ||||||| Sbjct: 94583 agctgtgggatgtcaaaatgcatcggtaggagagcgtt 94620
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 416 bits (210), Expect = e-113 Identities = 216/218 (99%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57612 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 57553 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57552 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 57493 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 57492 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccga 57433 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 57432 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 57395
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 416 bits (210), Expect = e-113 Identities = 216/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28467 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 28526 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28527 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 28586 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28587 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 28646 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||| ||||||| Sbjct: 28647 agctgtgggatgtcaaaatgcatcggtaggagagcgtt 28684
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 416 bits (210), Expect = e-113 Identities = 216/218 (99%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 805 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgatagaggagg 864 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 865 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 924 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 925 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 984 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 985 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 1022
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 385 bits (194), Expect = e-104 Identities = 212/218 (97%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1002 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 1061 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1062 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1121 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 1122 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 1181 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 1182 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 1219
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 385 bits (194), Expect = e-104 Identities = 212/218 (97%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131995 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 131936 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 131935 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 131876 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 131875 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 131816 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 131815 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 131778 Score = 385 bits (194), Expect = e-104 Identities = 212/218 (97%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104769 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 104828 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 104829 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 104888 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 104889 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 104948 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 104949 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 104986
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 385 bits (194), Expect = e-104 Identities = 212/218 (97%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126864 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 126805 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 126804 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 126745 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 126744 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 126685 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 126684 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 126647 Score = 385 bits (194), Expect = e-104 Identities = 212/218 (97%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108058 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 108117 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 108118 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 108177 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 108178 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 108237 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 108238 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 108275
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 385 bits (194), Expect = e-104 Identities = 212/218 (97%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132956 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 132897 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 132896 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 132837 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 132836 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 132777 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 132776 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 132739 Score = 385 bits (194), Expect = e-104 Identities = 212/218 (97%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105693 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 105752 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105753 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 105812 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 105813 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 105872 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 105873 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 105910
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 377 bits (190), Expect = e-101 Identities = 211/218 (96%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138501 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 138442 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 138441 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 138382 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 138381 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 138322 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| |||||||||||||| Sbjct: 138321 agctgtgggatgtaaaaatgcatcggtaggggagcgtt 138284 Score = 377 bits (190), Expect = e-101 Identities = 211/218 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110596 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 110655 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 110656 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 110715 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 110716 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 110775 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| |||||||||||||| Sbjct: 110776 agctgtgggatgtaaaaatgcatcggtaggggagcgtt 110813
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 377 bits (190), Expect = e-101 Identities = 211/218 (96%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134898 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 134839 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134838 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 134779 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 134778 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 134719 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| |||||||||||||| Sbjct: 134718 agctgtgggatgtaaaaatgcatcggtaggggagcgtt 134681 Score = 377 bits (190), Expect = e-101 Identities = 211/218 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107008 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 107067 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107068 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 107127 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 107128 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 107187 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| |||||||||||||| Sbjct: 107188 agctgtgggatgtaaaaatgcatcggtaggggagcgtt 107225
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 377 bits (190), Expect = e-101 Identities = 212/218 (97%), Gaps = 1/218 (0%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 122664 agggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaaggagg 122605 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 122604 tgggggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgt 122545 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122544 aatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccga 122486 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 122485 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 122448 Score = 377 bits (190), Expect = e-101 Identities = 212/218 (97%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 100073 agggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaaggagg 100132 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 100133 tgggggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgt 100192 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100193 aatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccga 100251 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 100252 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 100289
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 377 bits (190), Expect = e-101 Identities = 211/218 (96%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138577 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 138518 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 138517 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 138458 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 138457 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 138398 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| |||||||||||||| Sbjct: 138397 agctgtgggatgtaaaaatgcatcggtaggggagcgtt 138360 Score = 377 bits (190), Expect = e-101 Identities = 211/218 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111368 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 111427 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 111428 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 111487 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 111488 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 111547 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| |||||||||||||| Sbjct: 111548 agctgtgggatgtaaaaatgcatcggtaggggagcgtt 111585
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 377 bits (190), Expect = e-101 Identities = 211/218 (96%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141104 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 141045 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 141044 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 140985 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 140984 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 140925 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| |||||||||||||| Sbjct: 140924 agctgtgggatgtaaaaatgcatcggtaggggagcgtt 140887 Score = 377 bits (190), Expect = e-101 Identities = 211/218 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112553 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 112612 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 112613 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 112672 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 112673 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 112732 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| |||||||||||||| Sbjct: 112733 agctgtgggatgtaaaaatgcatcggtaggggagcgtt 112770
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 377 bits (190), Expect = e-101 Identities = 211/218 (96%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133988 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 133929 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 133928 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 133869 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 133868 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 133809 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| |||||||||||||| Sbjct: 133808 agctgtgggatgtaaaaatgcatcggtaggggagcgtt 133771 Score = 377 bits (190), Expect = e-101 Identities = 211/218 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106294 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 106353 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106354 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 106413 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 106414 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 106473 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| |||||||||||||| Sbjct: 106474 agctgtgggatgtaaaaatgcatcggtaggggagcgtt 106511
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 377 bits (190), Expect = e-101 Identities = 211/218 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1000 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 1059 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1060 taggggtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1119 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 1120 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 1179 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| ||||||||||||| Sbjct: 1180 agctgtgggatgtaaaaatgcatccgtaggggagcgtt 1217
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 377 bits (190), Expect = e-101 Identities = 211/218 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1023 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 1082 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1083 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1142 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 1143 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 1202 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| |||||||||||||| Sbjct: 1203 agctgtgggatgtaaaaatgcatcggtaggggagcgtt 1240
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 377 bits (190), Expect = e-101 Identities = 212/218 (97%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 6426 agggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaaggagg 6485 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 6486 tgggggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgt 6545 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6546 aatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccga 6604 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 6605 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 6642
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 377 bits (190), Expect = e-101 Identities = 211/218 (96%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135177 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 135118 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135117 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 135058 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 135057 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 134998 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| |||||||||||||| Sbjct: 134997 agctgtgggatgtaaaaatgcatcggtaggggagcgtt 134960 Score = 377 bits (190), Expect = e-101 Identities = 211/218 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107230 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 107289 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107290 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 107349 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 107350 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 107409 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| |||||||||||||| Sbjct: 107410 agctgtgggatgtaaaaatgcatcggtaggggagcgtt 107447
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 377 bits (190), Expect = e-101 Identities = 212/218 (97%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1014 agggaaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaaggagg 1073 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1074 tgggggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgt 1133 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1134 aatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccga 1192 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||| |||||||||||||| Sbjct: 1193 agctgtgggatgtcaaaatgcatcggtaggggagcgtt 1230
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 371 bits (187), Expect = e-100 Identities = 208/215 (96%) Strand = Plus / Minus Query: 4 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 63 ||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 568 gaaacagcccggatccccagctaaggcccttaaatgaccgctcaatgataaaggaggtgg 509 Query: 64 gggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaat 123 |||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 508 gggtgcaaagccagccatgaagtttgcctagaagcagccaccctttaaagagtgcgtaat 449 Query: 124 agctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagc 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 agctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagc 389 Query: 184 tgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||||||||||||||| |||||||||||||| Sbjct: 388 tgtgggatgtcaaaatgcatcggtaggggagcgtt 354
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 369 bits (186), Expect = 2e-99 Identities = 210/218 (96%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130664 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 130605 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 130604 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 130545 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 130544 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 130485 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 130484 agctgtgggatgtaaaaatacatcggtaggggagcgtt 130447 Score = 369 bits (186), Expect = 2e-99 Identities = 210/218 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103971 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 104030 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 104031 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 104090 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 104091 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 104150 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 104151 agctgtgggatgtaaaaatacatcggtaggggagcgtt 104188
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 369 bits (186), Expect = 2e-99 Identities = 210/218 (96%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135935 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 135876 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135875 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 135816 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 135815 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 135756 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 135755 agctgtgggatgtaaaaatacatcggtaggggagcgtt 135718 Score = 369 bits (186), Expect = 2e-99 Identities = 210/218 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107622 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 107681 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107682 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 107741 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 107742 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 107801 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 107802 agctgtgggatgtaaaaatacatcggtaggggagcgtt 107839
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 369 bits (186), Expect = 2e-99 Identities = 210/218 (96%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 141876 agggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 141817 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 141816 taggggtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 141757 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 141756 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 141697 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 141696 agctgtgggatgtaaaaatacatcggtaggggagcgtt 141659 Score = 369 bits (186), Expect = 2e-99 Identities = 210/218 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 111452 agggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 111511 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 111512 taggggtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 111571 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 111572 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 111631 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 111632 agctgtgggatgtaaaaatacatcggtaggggagcgtt 111669
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 369 bits (186), Expect = 2e-99 Identities = 210/218 (96%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135589 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 135530 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135529 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 135470 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 135469 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 135410 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 135409 agctgtgggatgtaaaaatacatcggtaggggagcgtt 135372 Score = 369 bits (186), Expect = 2e-99 Identities = 210/218 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106836 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 106895 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106896 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 106955 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 106956 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 107015 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 107016 agctgtgggatgtaaaaatacatcggtaggggagcgtt 107053
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 369 bits (186), Expect = 2e-99 Identities = 210/218 (96%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133220 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 133161 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 133160 taggggtgcagagacagccaggaggtttgcctagaagccgccacccttgaaagagtgcgt 133101 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 133100 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 133041 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| |||||||||||||| Sbjct: 133040 agctgtgggatgtaaaaatgcatcggtaggggagcgtt 133003 Score = 369 bits (186), Expect = 2e-99 Identities = 210/218 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104751 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 104810 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 104811 taggggtgcagagacagccaggaggtttgcctagaagccgccacccttgaaagagtgcgt 104870 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 104871 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 104930 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| |||||||||||||| Sbjct: 104931 agctgtgggatgtaaaaatgcatcggtaggggagcgtt 104968
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 369 bits (186), Expect = 2e-99 Identities = 210/218 (96%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138706 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 138647 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 138646 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 138587 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 138586 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 138527 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 138526 agctgtgggatgtaaaaatacatcggtaggggagcgtt 138489 Score = 369 bits (186), Expect = 2e-99 Identities = 210/218 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110593 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 110652 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 110653 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 110712 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 110713 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 110772 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 110773 agctgtgggatgtaaaaatacatcggtaggggagcgtt 110810
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 369 bits (186), Expect = 2e-99 Identities = 210/218 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1004 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 1063 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1064 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1123 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 1124 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 1183 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| |||| |||| |||||||||||||| Sbjct: 1184 agctgtgggatgtaaaaaggcatcggtaggggagcgtt 1221
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 131772 agggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 131713 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 131712 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 131653 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 131652 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 131593 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 131592 agctgtgggatgtaaaaatacatcggtaggggagcgtt 131555 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 105106 agggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 105165 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105166 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 105225 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 105226 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 105285 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 105286 agctgtgggatgtaaaaatacatcggtaggggagcgtt 105323
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135297 agggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 135238 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135237 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 135178 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 135177 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 135118 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 135117 agctgtgggatgtaaaaatacatcggtaggggagcgtt 135080 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107333 agggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 107392 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107393 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 107452 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 107453 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 107512 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 107513 agctgtgggatgtaaaaatacatcggtaggggagcgtt 107550
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2527 agggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 2586 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2587 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 2646 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 2647 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 2706 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 2707 agctgtgggatgtaaaaatacatcggtaggggagcgtt 2744
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134543 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 134484 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134483 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 134424 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||| Sbjct: 134423 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccga 134364 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 134363 agctgtgggatgtaaaaatacatcggtaggggagcgtt 134326 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106493 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 106552 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106553 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 106612 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||| Sbjct: 106613 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccga 106672 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 106673 agctgtgggatgtaaaaatacatcggtaggggagcgtt 106710
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1499 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 1558 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1559 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1618 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 1619 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 1678 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| |||| ||| |||||||||||||| Sbjct: 1679 agctgtgggatgtaaaaaaacatcggtaggggagcgtt 1716
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134678 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 134619 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134618 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 134559 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||| Sbjct: 134558 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccga 134499 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 134498 agctgtgggatgtaaaaatacatcggtaggggagcgtt 134461 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106665 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 106724 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106725 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 106784 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||| Sbjct: 106785 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccga 106844 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 106845 agctgtgggatgtaaaaatacatcggtaggggagcgtt 106882
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134676 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 134617 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134616 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 134557 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||| Sbjct: 134556 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccga 134497 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 134496 agctgtgggatgtaaaaatacatcggtaggggagcgtt 134459 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106662 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 106721 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106722 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 106781 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||| Sbjct: 106782 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccga 106841 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 106842 agctgtgggatgtaaaaatacatcggtaggggagcgtt 106879
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134588 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 134529 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134528 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 134469 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||| Sbjct: 134468 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccga 134409 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 134408 agctgtgggatgtaaaaatacatcggtaggggagcgtt 134371 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106540 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 106599 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106600 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 106659 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||| Sbjct: 106660 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccga 106719 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 106720 agctgtgggatgtaaaaatacatcggtaggggagcgtt 106757
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135295 agggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 135236 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 135235 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 135176 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 135175 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 135116 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 135115 agctgtgggatgtaaaaatacatcggtaggggagcgtt 135078 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107331 agggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 107390 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107391 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 107450 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 107451 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 107510 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 107511 agctgtgggatgtaaaaatacatcggtaggggagcgtt 107548
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129527 agggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 129468 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 129467 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 129408 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 129407 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 129348 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| |||||| || |||||||||||||| Sbjct: 129347 agctgtgggatgtaaaaatgaatcggtaggggagcgtt 129310 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102929 agggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 102988 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 102989 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 103048 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 103049 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 103108 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| |||||| || |||||||||||||| Sbjct: 103109 agctgtgggatgtaaaaatgaatcggtaggggagcgtt 103146
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 131765 agggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 131706 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 131705 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 131646 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 131645 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 131586 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 131585 agctgtgggatgtaaaaatacatcggtaggggagcgtt 131548 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 105104 agggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 105163 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 105164 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 105223 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 105224 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 105283 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 105284 agctgtgggatgtaaaaatacatcggtaggggagcgtt 105321
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135026 agggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 134967 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134966 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 134907 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 134906 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 134847 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 134846 agctgtgggatgtaaaaatacatcggtaggggagcgtt 134809 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107112 agggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 107171 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 107172 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 107231 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 107232 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 107291 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 107292 agctgtgggatgtaaaaatacatcggtaggggagcgtt 107329
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134555 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 134496 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 134495 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 134436 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||| Sbjct: 134435 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccga 134376 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 134375 agctgtgggatgtaaaaatacatcggtaggggagcgtt 134338 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106507 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 106566 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 106567 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 106626 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||| Sbjct: 106627 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccga 106686 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 106687 agctgtgggatgtaaaaatacatcggtaggggagcgtt 106724
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 361 bits (182), Expect = 6e-97 Identities = 209/218 (95%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1100 agggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 1159 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1160 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1219 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 1220 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 1279 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 1280 agctgtgggatgtaaaaatacatcggtaggggagcgtt 1317
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 359 bits (181), Expect = 2e-96 Identities = 205/213 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 334 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 335 taggggtgcagagacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 394 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 395 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 454 Query: 181 agctgtgggatgtcaaaatgcataggtagggga 213 |||||||||||||||||||| || ||||||||| Sbjct: 455 agctgtgggatgtcaaaatgaatcggtagggga 487
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 353 bits (178), Expect = 1e-94 Identities = 208/218 (95%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130788 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 130729 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 130728 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 130669 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||| Sbjct: 130668 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccga 130609 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| |||| ||| |||||||||||||| Sbjct: 130608 agctgtgggatgtaaaaaaacatcggtaggggagcgtt 130571 Score = 353 bits (178), Expect = 1e-94 Identities = 208/218 (95%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102657 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 102716 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 102717 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 102776 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||| Sbjct: 102777 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccga 102836 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| |||| ||| |||||||||||||| Sbjct: 102837 agctgtgggatgtaaaaaaacatcggtaggggagcgtt 102874
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 353 bits (178), Expect = 1e-94 Identities = 208/218 (95%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2772 agggaaacagtccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 2831 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2832 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 2891 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 2892 aatagcscactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 2951 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 2952 agctgtgggatgtaaaaatacatcggtaggggagcgtt 2989
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 353 bits (178), Expect = 1e-94 Identities = 208/218 (95%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1017 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 1076 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 1077 taggggtgcaaagacagccacgaggtttgcctagaagcagccacccttgaaagagtgcgt 1136 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| || |||||||||||||| ||||||||||| Sbjct: 1137 aatagctcactgatcgagcgctcttgcgcccaaaatgaacggggctaaacgatctgccga 1196 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| |||||||||||||| Sbjct: 1197 agctgtgggatgtaaaaatgcatcggtaggggagcgtt 1234
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 353 bits (178), Expect = 1e-94 Identities = 208/218 (95%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130864 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 130805 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 130804 taggggtgcagagacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 130745 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 130744 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 130685 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| |||| | || |||||||||||||| Sbjct: 130684 agctgtgggatgtaaaaaagaatcggtaggggagcgtt 130647 Score = 353 bits (178), Expect = 1e-94 Identities = 208/218 (95%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104530 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 104589 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 104590 taggggtgcagagacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 104649 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 104650 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 104709 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| |||| | || |||||||||||||| Sbjct: 104710 agctgtgggatgtaaaaaagaatcggtaggggagcgtt 104747
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 345 bits (174), Expect = 3e-92 Identities = 192/198 (96%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139364 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 139305 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 139304 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 139245 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 139244 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 139185 Query: 181 agctgtgggatgtcaaaa 198 ||||||||||||| |||| Sbjct: 139184 agctgtgggatgtaaaaa 139167 Score = 345 bits (174), Expect = 3e-92 Identities = 192/198 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110696 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 110755 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 110756 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 110815 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 110816 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 110875 Query: 181 agctgtgggatgtcaaaa 198 ||||||||||||| |||| Sbjct: 110876 agctgtgggatgtaaaaa 110893
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 345 bits (174), Expect = 3e-92 Identities = 207/218 (94%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1009 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 1068 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 1069 taggggtgcagagacagccaggaggtttgcctaaaagcagccacccttgaaagagtgcgt 1128 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| Sbjct: 1129 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaaacgatctgccga 1188 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| |||| ||| |||||||||||||| Sbjct: 1189 agctgtgggatgtaaaaaaacatcggtaggggagcgtt 1226
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 345 bits (174), Expect = 3e-92 Identities = 207/218 (94%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1023 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 1082 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||| |||||||||||| |||||||||||||| ||||||||||| Sbjct: 1083 taggggtgcacagacagccaagaggtttgcctaaaagcagccacccttgaaagagtgcgt 1142 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 1143 aataactcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 1202 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| ||||||||||||| Sbjct: 1203 agctgtgggatgtaaaaatgcatccgtaggggagcgtt 1240
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 345 bits (174), Expect = 3e-92 Identities = 208/218 (95%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 464 agggaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 523 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | ||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 524 taggggtgcga-gacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 582 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 583 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 642 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 643 agctgtgggatgtaaaaatacatcggtaggggagcgtt 680
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 341 bits (172), Expect = 5e-91 Identities = 187/192 (97%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 540 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 541 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 600 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 601 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 660 Query: 181 agctgtgggatg 192 |||||||||||| Sbjct: 661 agctgtgggatg 672
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 337 bits (170), Expect = 9e-90 Identities = 206/218 (94%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5223 agggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 5282 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5283 taggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 5342 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 5343 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 5402 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||| | |||||| || |||||||||||||| Sbjct: 5403 agctgtgggatctaaaaatgaatcggtaggggagcgtt 5440
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 337 bits (170), Expect = 9e-90 Identities = 206/218 (94%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 22702 agggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 22643 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 22642 taggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 22583 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 22582 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 22523 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||| | |||||| || |||||||||||||| Sbjct: 22522 agctgtgggatctaaaaatgaatcggtaggggagcgtt 22485
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 337 bits (170), Expect = 9e-90 Identities = 191/198 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 984 agggaaacagcccggatcaccagctaaggcccctaaatgaccgcccagtgataaaggagg 1043 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1044 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1103 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 1104 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 1163 Query: 181 agctgtgggatgtcaaaa 198 ||||||||||||| |||| Sbjct: 1164 agctgtgggatgtaaaaa 1181
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 337 bits (170), Expect = 9e-90 Identities = 206/218 (94%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1011 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcaatgataaaggagg 1070 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||| |||||||||||| |||||||||||||| ||||||||||| Sbjct: 1071 taggggtgcacagacagccacgaggtttgcctataagcagccacccttgaaagagtgcgt 1130 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||| Sbjct: 1131 aatagctcactgatcgagcgctcttgcgcccaagatgaacggggctaaacgatctgccga 1190 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| |||||||||||||| Sbjct: 1191 agctgtgggatgtaaaaatgcatcggtaggggagcgtt 1228
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 337 bits (170), Expect = 9e-90 Identities = 206/218 (94%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1022 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 1081 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 1082 taggggtgcagagacagccaagaggtttgcctagaagcagccacccttgaaagagtgcgt 1141 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| || |||||||||||||||||||||||||| Sbjct: 1142 aatagctcactgatccagcgctcttgcgcccaaaatgaacggggctaagcgatctgccga 1201 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||||||| ||||||||||||| Sbjct: 1202 agctgtgggatgtaaaaatgcatccgtaggggagcgtt 1239
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 337 bits (170), Expect = 9e-90 Identities = 206/218 (94%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1007 agggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggagg 1066 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1067 taggagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1126 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||||||| ||||||| |||||||| Sbjct: 1127 aatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccga 1186 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||| ||| |||||||||||||| Sbjct: 1187 agctgtgggatgtcaaaatacatcggtaggggagcgtt 1224
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 337 bits (170), Expect = 9e-90 Identities = 206/218 (94%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5495 agggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 5554 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5555 taggagtgcagagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgt 5614 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| Sbjct: 5615 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccga 5674 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| |||||| || |||||||||||||| Sbjct: 5675 agctgtgggatgtaaaaatgaatcggtaggggagcgtt 5712
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 337 bits (170), Expect = 9e-90 Identities = 206/218 (94%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5495 agggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 5554 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5555 taggagtgcagagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgt 5614 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| Sbjct: 5615 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccga 5674 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| |||||| || |||||||||||||| Sbjct: 5675 agctgtgggatgtaaaaatgaatcggtaggggagcgtt 5712
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 333 bits (168), Expect = 1e-88 Identities = 195/204 (95%), Gaps = 5/204 (2%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167968 agggaaacagcctggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 168027 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct: 168028 tgggggtgcaaagac-----ggaggtttgcctaaaagcagccaccctttaaagagtgcgt 168082 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 168083 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccaa 168142 Query: 181 agctgtgggatgtcaaaatgcata 204 ||||||||||||||||||| |||| Sbjct: 168143 agctgtgggatgtcaaaatacata 168166
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 333 bits (168), Expect = 1e-88 Identities = 195/204 (95%), Gaps = 5/204 (2%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2372 agggaaacagcctggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 2431 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct: 2432 tgggggtgcaaagac-----ggaggtttgcctaaaagcagccaccctttaaagagtgcgt 2486 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2487 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccaa 2546 Query: 181 agctgtgggatgtcaaaatgcata 204 ||||||||||||||||||| |||| Sbjct: 2547 agctgtgggatgtcaaaatacata 2570
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 333 bits (168), Expect = 1e-88 Identities = 193/200 (96%), Gaps = 1/200 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177847 agggaaagagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 177906 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 177907 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 177966 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgat-ctgccg 179 ||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| Sbjct: 177967 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatcctgccg 178026 Query: 180 aagctgtgggatgtcaaaat 199 |||||||||||||||||||| Sbjct: 178027 aagctgtgggatgtcaaaat 178046 Score = 48.1 bits (24), Expect = 0.011 Identities = 51/60 (85%) Strand = Plus / Plus Query: 73 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 132 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.011 Identities = 51/60 (85%) Strand = Plus / Plus Query: 73 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 132 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 aggcccctaaatgaccgctcag 48 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 329 bits (166), Expect = 2e-87 Identities = 205/218 (94%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1007 agggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggagg 1066 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1067 taggagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1126 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||||||| ||||||| |||||||| Sbjct: 1127 aatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccga 1186 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||||||||||||| ||| |||||||||||||| Sbjct: 1187 agctgtgggatgtcaaaaaacatcggtaggggagcgtt 1224
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 329 bits (166), Expect = 2e-87 Identities = 205/218 (94%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 117142 agggaaacagcccagatcaccagctaaggcccctaaatgaccgctaagtggtaaaggagg 117083 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 117082 taggagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 117023 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||||||| ||||||| |||||||| Sbjct: 117022 aatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccga 116963 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||| ||| |||||||||||||| Sbjct: 116962 agctgtgggatgtcaaaatacatcggtaggggagcgtt 116925 Score = 329 bits (166), Expect = 2e-87 Identities = 205/218 (94%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 90960 agggaaacagcccagatcaccagctaaggcccctaaatgaccgctaagtggtaaaggagg 91019 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 91020 taggagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 91079 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||||||| ||||||| |||||||| Sbjct: 91080 aatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccga 91139 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||| ||| |||||||||||||| Sbjct: 91140 agctgtgggatgtcaaaatacatcggtaggggagcgtt 91177
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 323 bits (163), Expect = 1e-85 Identities = 166/167 (99%) Strand = Plus / Plus Query: 52 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 111 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 112 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 172 atctgccgaagctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgtt 167
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 321 bits (162), Expect = 5e-85 Identities = 204/218 (93%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 115204 aggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggagg 115145 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 115144 taggagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 115085 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||| Sbjct: 115084 aatagctcactgatcaagcgctcttgcgccgaagatgaatgggactaagcggtctgccga 115025 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||| ||| |||||||||||||| Sbjct: 115024 agctgtgggatgtcaaaatacatcggtaggggagcgtt 114987 Score = 321 bits (162), Expect = 5e-85 Identities = 204/218 (93%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 86916 aggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggagg 86975 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 86976 taggagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 87035 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||| Sbjct: 87036 aatagctcactgatcaagcgctcttgcgccgaagatgaatgggactaagcggtctgccga 87095 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||| ||| |||||||||||||| Sbjct: 87096 agctgtgggatgtcaaaatacatcggtaggggagcgtt 87133
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 321 bits (162), Expect = 5e-85 Identities = 204/218 (93%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 87265 aggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgatgaaggaag 87324 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | | |||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 87325 tacgagtgcaaagacagccaggaggtttgcctagaagcagccaaccttgaaagagtgcgt 87384 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||| Sbjct: 87385 aatagctcactgatcgagcgctcttgcgccgaagatgaacgggactaagcgatctgccga 87444 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||| ||| |||||||||||||| Sbjct: 87445 agctgtgggatgtcaaaatacatcggtaggggagcgtt 87482
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 317 bits (160), Expect = 8e-84 Identities = 169/172 (98%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 122203 agggaaacagcctggatcaccagctaaggcccctaaatgaccgctcaatgataaaggagg 122144 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122143 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 122084 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcga 172 ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 122083 aatagctcactaatcgagcgcccttgcgctgaagatgaacggggctaagcga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 317 bits (160), Expect = 8e-84 Identities = 169/172 (98%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 12824744 agggaaacagcctggatcaccagctaaggcccctaaatgaccgctcaatgataaaggagg 12824685 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824684 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 12824625 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcga 172 ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 12824624 aatagctcactaatcgagcgcccttgcgctgaagatgaacggggctaagcga 12824573
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 315 bits (159), Expect = 3e-83 Identities = 183/191 (95%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 115465 agggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggagg 115406 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 115405 taggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 115346 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 115345 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccga 115286 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 115285 agctgtgggat 115275
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 313 bits (158), Expect = 1e-82 Identities = 203/218 (93%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 144935 aggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggagg 144994 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 144995 taggagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 145054 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| |||||||| |||| ||||||| |||||||| Sbjct: 145055 aatagctcactgatcaagcgctcttgcgccgaagatgagcgggactaagcggtctgccga 145114 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||||||||||||| ||| |||||||||||||| Sbjct: 145115 agctgtgggatgtcaaaaaacatcggtaggggagcgtt 145152 Score = 313 bits (158), Expect = 1e-82 Identities = 203/218 (93%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 87916 aggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggagg 87857 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 87856 taggagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 87797 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| |||||||| |||| ||||||| |||||||| Sbjct: 87796 aatagctcactgatcaagcgctcttgcgccgaagatgagcgggactaagcggtctgccga 87737 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||||||||||||| ||| |||||||||||||| Sbjct: 87736 agctgtgggatgtcaaaaaacatcggtaggggagcgtt 87699
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 313 bits (158), Expect = 1e-82 Identities = 173/178 (97%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 556 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 557 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 616 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 178 ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 617 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgcc 674
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 313 bits (158), Expect = 1e-82 Identities = 204/218 (93%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 1020 agggaaacagccctgatcacccgctaaggcccctaaatgatcgctcagtgataaaggagg 1079 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||| || |||||||||||||| ||||||||||| Sbjct: 1080 taggggtgcagagacagccaggaggtttgc-tataagcagccacccttgaaagagtgcgt 1138 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| Sbjct: 1139 aatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagtgatctgccga 1198 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| |||| |||| |||||||||||||| Sbjct: 1199 agctgtgggatgtaaaaaggcatcggtaggggagcgtt 1236
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 313 bits (158), Expect = 1e-82 Identities = 203/218 (93%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 4900 agggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggagg 4959 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4960 taagagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 5019 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||| Sbjct: 5020 aatagctcactgatcaagcgctcttgcgccgaagatgaatgggactaagcggtctgccga 5079 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||||||||| |||| ||| |||||||||||||| Sbjct: 5080 agctgtgggatgtcgaaatacatcggtaggggagcgtt 5117
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 313 bits (158), Expect = 1e-82 Identities = 203/218 (93%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||||||||||||||||||||||||| |||| | ||||||| Sbjct: 991 agggaaacagcccagatcaccagctaaggcccctaaatgaccgctaagtggtgaaggagg 1050 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1051 taggggtgcaaagacagccaggaggtttgcctagaagcagccatccttgaaagagtgcgt 1110 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||| Sbjct: 1111 aatagctcactgatcaagcgctcttgcgccgaagatgaatgggactaagcggtctgccga 1170 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||| ||| |||||||||||||| Sbjct: 1171 agctgtgggatgtcaaaatacatcggtaggggagcgtt 1208
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 313 bits (158), Expect = 1e-82 Identities = 203/218 (93%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1010 agggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggagg 1069 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1070 taagagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1129 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||| Sbjct: 1130 aatagctcactgatcaagcgctcttgcgccgaagatgaatgggactaagcggtctgccga 1189 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||||||||| |||| ||| |||||||||||||| Sbjct: 1190 agctgtgggatgtcgaaatacatcggtaggggagcgtt 1227
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 313 bits (158), Expect = 1e-82 Identities = 203/218 (93%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 150235 agggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggagg 150176 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 150175 taagagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 150116 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||| Sbjct: 150115 aatagctcactgatcaagcgctcttgcgccgaagatgaatgggactaagcggtctgccga 150056 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||||||||| |||| ||| |||||||||||||| Sbjct: 150055 agctgtgggatgtcgaaatacatcggtaggggagcgtt 150018 Score = 313 bits (158), Expect = 1e-82 Identities = 203/218 (93%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 118431 agggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggagg 118490 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 118491 taagagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 118550 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||| Sbjct: 118551 aatagctcactgatcaagcgctcttgcgccgaagatgaatgggactaagcggtctgccga 118610 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||||||||| |||| ||| |||||||||||||| Sbjct: 118611 agctgtgggatgtcgaaatacatcggtaggggagcgtt 118648
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 313 bits (158), Expect = 1e-82 Identities = 203/218 (93%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1010 agggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggagg 1069 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1070 taagagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1129 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||| Sbjct: 1130 aatagctcactgatcaagcgctcttgcgccgaagatgaatgggactaagcggtctgccga 1189 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||||||||| |||| ||| |||||||||||||| Sbjct: 1190 agctgtgggatgtcgaaatacatcggtaggggagcgtt 1227
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 305 bits (154), Expect = 3e-80 Identities = 202/218 (92%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 89352 aggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgatgaaggaag 89411 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | | |||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 89412 tacgagtgcaaagacagccaggaggtttgcctagaagcagccaaccttgaaagagtgcgt 89471 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| | ||||| ||||||||||||| |||||||||||||||| Sbjct: 89472 aatagctcactgatcgagcgctcgtgcgccgaagatgaacgggactaagcgatctgccga 89531 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 89532 agctgtgggatgtaaaaatacatcggtaggggagcgtt 89569
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 299 bits (151), Expect = 2e-78 Identities = 203/219 (92%), Gaps = 1/219 (0%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 51682 agggaaacagcccggatcaccagctaaggcccctaattgatcgctcagtgataaaggagg 51623 Query: 61 tg-ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcg 119 | |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 51622 ttaggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcg 51563 Query: 120 taatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccg 179 |||||||| ||||||||||||| ||||||| ||| ||||||||||||||||||| |||| Sbjct: 51562 taatagcttactgatcgagcgctcttgcgccgaatatgaacggggctaagcgattcgccg 51503 Query: 180 aagctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||||||||| |||| ||| |||||||||||||| Sbjct: 51502 aagctgtgggatgtaaaaagacatcggtaggggagcgtt 51464 Score = 299 bits (151), Expect = 2e-78 Identities = 203/219 (92%), Gaps = 1/219 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 38146 agggaaacagcccggatcaccagctaaggcccctaattgatcgctcagtgataaaggagg 38205 Query: 61 tg-ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcg 119 | |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 38206 ttaggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcg 38265 Query: 120 taatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccg 179 |||||||| ||||||||||||| ||||||| ||| ||||||||||||||||||| |||| Sbjct: 38266 taatagcttactgatcgagcgctcttgcgccgaatatgaacggggctaagcgattcgccg 38325 Query: 180 aagctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||||||||| |||| ||| |||||||||||||| Sbjct: 38326 aagctgtgggatgtaaaaagacatcggtaggggagcgtt 38364
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 299 bits (151), Expect = 2e-78 Identities = 203/219 (92%), Gaps = 1/219 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 5074 agggaaacagcccggatcaccagctaaggcccctaattgatcgctcagtgataaaggagg 5133 Query: 61 tg-ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcg 119 | |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 5134 ttaggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcg 5193 Query: 120 taatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccg 179 |||||||| ||||||||||||| ||||||| ||| ||||||||||||||||||| |||| Sbjct: 5194 taatagcttactgatcgagcgctcttgcgccgaatatgaacggggctaagcgattcgccg 5253 Query: 180 aagctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||||||||| |||| ||| |||||||||||||| Sbjct: 5254 aagctgtgggatgtaaaaagacatcggtaggggagcgtt 5292
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 297 bits (150), Expect = 7e-78 Identities = 183/194 (94%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1105 agggaaacagcccagaccaccagctaaggcccctaaatgaccgctcagtggcaaaggagg 1164 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1165 tgagagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1224 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||| Sbjct: 1225 aatagctcactgatcgagcgctcttgcgccgaagatgaacgggactaagcggtctgccga 1284 Query: 181 agctgtgggatgtc 194 |||||||||||||| Sbjct: 1285 agctgtgggatgtc 1298
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 297 bits (150), Expect = 7e-78 Identities = 183/194 (94%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 988 agggaaacagcccagaccaccagctaaggcccctaaatgaccgctcagtggcaaaggagg 1047 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1048 tgagagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1107 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||| Sbjct: 1108 aatagctcactgatcgagcgctcttgcgccgaagatgaacgggactaagcggtctgccga 1167 Query: 181 agctgtgggatgtc 194 |||||||||||||| Sbjct: 1168 agctgtgggatgtc 1181
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 297 bits (150), Expect = 7e-78 Identities = 183/194 (94%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||| Sbjct: 947 agggaaacagcccagatcactagctaaggccccaaaatgaccgctcagtgataaaggagg 1006 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1007 tgggagtgcaaagacatccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1066 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||| ||| ||||||| |||||||| Sbjct: 1067 aatagctcactgatcgagcgctcttgcgccgaagatgaatgggactaagcggtctgccga 1126 Query: 181 agctgtgggatgtc 194 |||||||||||||| Sbjct: 1127 agctgtgggatgtc 1140
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 297 bits (150), Expect = 7e-78 Identities = 201/218 (92%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| ||||||| ||||||||||||||||||||||| |||| ||||||||| Sbjct: 1011 aggggaacagcccagatcaccggctaaggcccctaaatgaccgctaagtggtaaaggagg 1070 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || |||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1071 taggagtgcaaagacagccaggaggtttgcctagaagcagccatccttgaaagagtgcgt 1130 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||| Sbjct: 1131 aatagctcactgatcaagcgctcttgcgccgaagatgaatgggactaagcggtctgccga 1190 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||| ||| |||||||||||||| Sbjct: 1191 agctgtgggatgtcaaaatacatcggtaggggagcgtt 1228
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 297 bits (150), Expect = 7e-78 Identities = 183/194 (94%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1001 agggaaacagcccagaccaccagctaaggcccctaaatgaccgctcagtggcaaaggagg 1060 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1061 tgagagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1120 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||| Sbjct: 1121 aatagctcactgatcgagcgctcttgcgccgaagatgaacgggactaagcggtctgccga 1180 Query: 181 agctgtgggatgtc 194 |||||||||||||| Sbjct: 1181 agctgtgggatgtc 1194
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 291 bits (147), Expect = 5e-76 Identities = 186/199 (93%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 1003 agggaaacagcccagatcaccagctaaggcccctaattgatcgctcagtgataaaggagg 1062 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 1063 taggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaatagtgcgt 1122 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| ||||||||||||| ||||||| |||||| ||||||||||||||||| ||||| Sbjct: 1123 aatagcttactgatcgagcgctcttgcgccgaagattaacggggctaagcgatccgccga 1182 Query: 181 agctgtgggatgtcaaaat 199 ||||||||||||| ||||| Sbjct: 1183 agctgtgggatgtaaaaat 1201
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 289 bits (146), Expect = 2e-75 Identities = 200/218 (91%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| |||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 145547 aggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtgaaggagg 145488 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || ||||| |||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 145487 taggagtgcagagacagccaggaagtttgcctagaagcagccacccttgaaagagtgcgt 145428 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||| ||||||||| ||||||| |||||||| Sbjct: 145427 aatagctcactgatcaagcgctcttgcgccgaaaatgaacgggactaagcggtctgccga 145368 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||||||||||||| ||| |||||||||||||| Sbjct: 145367 agctgtgggatgtcaaaaaacatcggtaggggagcgtt 145330 Score = 289 bits (146), Expect = 2e-75 Identities = 200/218 (91%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| |||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 112915 aggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtgaaggagg 112974 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || ||||| |||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 112975 taggagtgcagagacagccaggaagtttgcctagaagcagccacccttgaaagagtgcgt 113034 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||| ||||||||| ||||||| |||||||| Sbjct: 113035 aatagctcactgatcaagcgctcttgcgccgaaaatgaacgggactaagcggtctgccga 113094 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||||||||||||| ||| |||||||||||||| Sbjct: 113095 agctgtgggatgtcaaaaaacatcggtaggggagcgtt 113132
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 289 bits (146), Expect = 2e-75 Identities = 185/198 (93%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| || ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 990 aggggaacagcccagaccaccagctaaggcccctaaatgaccgctcagtggcaaaggagg 1049 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1050 tgagagtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1109 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||| Sbjct: 1110 aatagctcactgatcgagcgctcttgcgccgaagatgaacgggactaagcggtctgccga 1169 Query: 181 agctgtgggatgtcaaaa 198 |||||||||||||||||| Sbjct: 1170 agctgtgggatgtcaaaa 1187
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 283 bits (143), Expect = 1e-73 Identities = 176/187 (94%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1393 agggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggcaaaggagg 1452 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1453 tgagagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1512 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| |||||||| Sbjct: 1513 aatagctcactgatcgagcgctcttgcgccgaaaatgaacgggactaagcggtctgccga 1572 Query: 181 agctgtg 187 ||||||| Sbjct: 1573 agctgtg 1579
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 283 bits (143), Expect = 1e-73 Identities = 182/195 (93%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| || ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 124275 aggggaacagcccagaccaccagctaaggcccctaaatgaccgctcagtggcaaaggagg 124216 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 124215 tgagagtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 124156 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||| Sbjct: 124155 aatagctcactgatcgagcgctcttgcgccgaagatgaacgggactaagcggtctgccga 124096 Query: 181 agctgtgggatgtca 195 ||||||||||||||| Sbjct: 124095 agctgtgggatgtca 124081 Score = 283 bits (143), Expect = 1e-73 Identities = 182/195 (93%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| || ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95591 aggggaacagcccagaccaccagctaaggcccctaaatgaccgctcagtggcaaaggagg 95650 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 95651 tgagagtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 95710 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||| Sbjct: 95711 aatagctcactgatcgagcgctcttgcgccgaagatgaacgggactaagcggtctgccga 95770 Query: 181 agctgtgggatgtca 195 ||||||||||||||| Sbjct: 95771 agctgtgggatgtca 95785
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 281 bits (142), Expect = 4e-73 Identities = 199/218 (91%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2818 agggaaacaacctggatcaccagctaaggcccctaaatgactgctcagtgataaaggagg 2759 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | ||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||| Sbjct: 2758 taggggtgcaaagacagccaggaggtttgcctagaagcaaccacccttgaaaaagtgcgt 2699 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||| ||||||||| ||||| | |||||||| ||||||||||||||| || Sbjct: 2698 aatagctcactaatcgagcgcacttgcaccaaagatgaattgggctaagcgatctgttga 2639 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||| |||||||||||||||||| | |||||||||||| Sbjct: 2638 agctatgggatgtcaaaatgcatcgataggggagcgtt 2601
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 281 bits (142), Expect = 4e-73 Identities = 142/142 (100%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 867 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 927 Query: 121 aatagctcactgatcgagcgcc 142 |||||||||||||||||||||| Sbjct: 928 aatagctcactgatcgagcgcc 949
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 280 bits (141), Expect = 2e-72 Identities = 166/173 (95%), Gaps = 1/173 (0%) Strand = Plus / Plus Query: 46 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 105 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 106 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 165 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 166 taagcgatctgccgaagctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgtt 172
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 274 bits (138), Expect = 1e-70 Identities = 198/218 (90%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| ||| ||||| |||||||||||||||||||||||||||| ||||| | Sbjct: 5560 aggggaacagcccagattaccagataaggcccctaaatgaccgctcagtgatgaaggatg 5501 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5500 tatgagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 5441 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| ||||||||||||| ||||| | ||||||||||||| |||||||||||||||| Sbjct: 5440 aatagcttactgatcgagcgctcttgcaccgaagatgaacgggactaagcgatctgccga 5381 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||| || ||| ||| |||||||||||||| Sbjct: 5380 agctgtgggatatctaaaaacatcggtaggggagcgtt 5343
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 274 bits (138), Expect = 1e-70 Identities = 198/218 (90%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 5039 agggaaacagcccagatcaccagctaaggcccctaaatggccgctaagtggtaaaggagg 5098 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||| Sbjct: 5099 tgggagtgcaaagacaatcagtaggtttgcctagaagcagccatccttaaaagagtgcgt 5158 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||||||| ||||||| |||||||| Sbjct: 5159 aatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccga 5218 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||| ||| |||||||||||||| Sbjct: 5219 agctgtgggatgtaaaataacatcggtaggggagcgtt 5256
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 274 bits (138), Expect = 1e-70 Identities = 198/218 (90%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 1006 agggaaacagcccagatcaccagctaaggcccctaaatggccgctaagtggtaaaggagg 1065 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||| Sbjct: 1066 tgggagtgcaaagacaatcagtaggtttgcctagaagcagccatccttaaaagagtgcgt 1125 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||||||| ||||||| |||||||| Sbjct: 1126 aatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccga 1185 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||| ||| |||||||||||||| Sbjct: 1186 agctgtgggatgtaaaataacatcggtaggggagcgtt 1223
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 274 bits (138), Expect = 1e-70 Identities = 198/218 (90%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 127435 aggggaacagcccagatcaccagctaaggcccctaaatgactgctcagtggtaaaggagg 127376 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 127375 taggagtgcaaagacagccaggaggtttgcctagaagcagccacccttaaaagagtgcgt 127316 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||| ||| ||| ||||||||| ||||| | |||||||| Sbjct: 127315 aatagctcactgatcaagcgctcttacgccgaaaatgaacgggactaagtggtctgccga 127256 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||| ||||||||| ||| |||||||||||||| Sbjct: 127255 agctgtgagatgtcaaaggacatcggtaggggagcgtt 127218 Score = 274 bits (138), Expect = 1e-70 Identities = 198/218 (90%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 96012 aggggaacagcccagatcaccagctaaggcccctaaatgactgctcagtggtaaaggagg 96071 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 96072 taggagtgcaaagacagccaggaggtttgcctagaagcagccacccttaaaagagtgcgt 96131 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||| ||| ||| ||||||||| ||||| | |||||||| Sbjct: 96132 aatagctcactgatcaagcgctcttacgccgaaaatgaacgggactaagtggtctgccga 96191 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||| ||||||||| ||| |||||||||||||| Sbjct: 96192 agctgtgagatgtcaaaggacatcggtaggggagcgtt 96229
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 272 bits (137), Expect = 4e-70 Identities = 140/141 (99%) Strand = Plus / Minus Query: 78 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 138 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 198 atgcataggtaggggagcgtt 218 |||||| |||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgtt 20730
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 272 bits (137), Expect = 4e-70 Identities = 179/193 (92%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| ||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 1038 aggggaacagcccagatcaccagctaaggcccctaaatgaccgctaagttataaaggagg 1097 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1098 taggggtgcatagacagccaggaggtttgcctagaagaagccaccctttaaagagtgcgt 1157 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| ||||||||||||| ||||||| ||| ||||||||| ||||||||| ||||| Sbjct: 1158 aatagctaactgatcgagcgctcttgcgccgaatatgaacgggaataagcgatccgccga 1217 Query: 181 agctgtgggatgt 193 ||||||||||||| Sbjct: 1218 agctgtgggatgt 1230
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 272 bits (137), Expect = 4e-70 Identities = 179/193 (92%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||| | Sbjct: 952 agggaaacagcccagatcaccagttaaggcccctaaatgaccgctaagtgataaaggatg 1011 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 1012 tgagagtgcaaagacagccaggaggtttgcctagaagcagctacccttgaaagagtgcgt 1071 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||||||||| ||||||| ||||||||| ||| ||||||| |||||||| Sbjct: 1072 aatagctcactgatcgagcgctcttgcgccgaagatgaatgggactaagcggtctgccga 1131 Query: 181 agctgtgggatgt 193 ||||||| ||||| Sbjct: 1132 agctgtgagatgt 1144
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 266 bits (134), Expect = 3e-68 Identities = 197/218 (90%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 1001 agggaaacagcccagaccaccagctaaggcccctaaatggccgctaagtggtaaaggagg 1060 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||||||||| ||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1061 tgggagtgcaaagacaatcaggaggtttgcctagaagcagccatccttaaaagagtgcgt 1120 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| || |||| ||||||||| ||| ||||||| |||||||| Sbjct: 1121 aatagctcactgatcaagcgctctcgcgccgaagatgaatgggactaagcggtctgccga 1180 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||||||| ||||| ||| |||||||||||||| Sbjct: 1181 agctgtgggatgctaaaatacatcggtaggggagcgtt 1218
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 266 bits (134), Expect = 3e-68 Identities = 197/218 (90%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||||||||||||||||||| ||||| |||| ||||| ||| Sbjct: 1006 agggaaacagcccagatcaccagctaaggcccctaaatggccgctaagtggtaaagaagg 1065 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||||||||| ||| ||||||||||||||||||||| |||| ||||||||||| Sbjct: 1066 tgggagtgcaaagacaatcagtaggtttgcctagaagcagccatccttaaaagagtgcgt 1125 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||||||| ||||||| |||||||| Sbjct: 1126 aatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccga 1185 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||| ||| ||| |||||||||||||| Sbjct: 1186 agctgtgggatgtaaaataacatcggtaggggagcgtt 1223
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 248 bits (125), Expect = 6e-63 Identities = 176/193 (91%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| ||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 1009 aggggaacagcccagatcaccagctaaggcccctaaatgaccgctaagttataaaggagg 1068 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1069 taggggtgcatagacaaccaggaggtttgcctagaagaagccaccctttaaagagtgcgt 1128 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| ||||||||||||| ||||||| ||| ||||| ||| ||||||| | ||||| Sbjct: 1129 aatagctaactgatcgagcgctcttgcgccgaatatgaatgggaataagcgacccgccga 1188 Query: 181 agctgtgggatgt 193 ||||||||||||| Sbjct: 1189 agctgtgggatgt 1201
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 248 bits (125), Expect = 6e-63 Identities = 197/220 (89%), Gaps = 2/220 (0%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| |||||||||||||||||||| ||||||||||||||| | ||||||| Sbjct: 138260 aggggaacagcccagatcaccagctaaggcccctgaatgaccgctcagtggtgaaggagg 138201 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||| Sbjct: 138200 taggagtgcaaagacagccgggaggtttgcccagaagcagccacccttgaaagagtgcgt 138141 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 | ||||||||||||| ||||| | ||||| || |||||||||| ||||||| |||||||| Sbjct: 138140 agtagctcactgatcaagcgctcctgcgccgaggatgaacgggactaagcggtctgccga 138081 Query: 181 agctgtgggatgtc--aaaatgcataggtaggggagcgtt 218 |||||||||||||| | ||| ||| |||||||||||||| Sbjct: 138080 agctgtgggatgtcgaacaatacatcggtaggggagcgtt 138041 Score = 248 bits (125), Expect = 6e-63 Identities = 197/220 (89%), Gaps = 2/220 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| |||||||||||||||||||| ||||||||||||||| | ||||||| Sbjct: 83617 aggggaacagcccagatcaccagctaaggcccctgaatgaccgctcagtggtgaaggagg 83676 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | || |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||| Sbjct: 83677 taggagtgcaaagacagccgggaggtttgcccagaagcagccacccttgaaagagtgcgt 83736 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 | ||||||||||||| ||||| | ||||| || |||||||||| ||||||| |||||||| Sbjct: 83737 agtagctcactgatcaagcgctcctgcgccgaggatgaacgggactaagcggtctgccga 83796 Query: 181 agctgtgggatgtc--aaaatgcataggtaggggagcgtt 218 |||||||||||||| | ||| ||| |||||||||||||| Sbjct: 83797 agctgtgggatgtcgaacaatacatcggtaggggagcgtt 83836
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 228 bits (115), Expect = 6e-57 Identities = 172/191 (90%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 1002 agggaaacagcccagatcaccagctaaggcccctaaatgaccgctaagtggtaaaggagg 1061 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1062 tgagaatgctgaaacaaccaggaggtttgcttagaagcagccaccctttaaagagtgcgt 1121 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| | ||||| ||||||| ||| ||||||||| ||||||| |||||||| Sbjct: 1122 aatagctcactggtggagcgttcttgcgccgaaaatgaacgggactaagcggtctgccga 1181 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 1182 agctgtgggat 1192
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 224 bits (113), Expect = 9e-56 Identities = 125/129 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19152902 agggaaacaacccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 19152961 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19152962 tgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 19153021 Query: 121 aatagctca 129 ||| |||| Sbjct: 19153022 tatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 224 bits (113), Expect = 9e-56 Identities = 125/129 (96%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76297 agggaaacaacccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 76356 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76357 tgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 76416 Query: 121 aatagctca 129 ||| |||| Sbjct: 76417 tatatctca 76425
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 222 bits (112), Expect = 3e-55 Identities = 172/192 (89%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||| | Sbjct: 988 agggaaacagcccagatcaccagctaaggccccagaatggccgctcagtgataaaggatg 1047 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | |||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1048 tgagagtgcccagacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1107 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| ||||||| ||| ||||||||| ||||||| ||||||| Sbjct: 1108 aatagctcactggtcaagcgctcttgcgccgaaaatgaacgggactaagcggcctgccga 1167 Query: 181 agctgtgggatg 192 ||||||| |||| Sbjct: 1168 agctgtgagatg 1179
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 218 bits (110), Expect = 5e-54 Identities = 173/194 (89%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||||||||||||||||||| ||||| |||| |||||| | Sbjct: 988 agggaaacagcccagatcaccagctaaggcccctaaatggccgctaagtggcaaaggatg 1047 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1048 tgagagtgcagagacaaccaggaggtttgcctagaagcagccacccttaaaagagtgcgt 1107 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| ||||||| ||| ||| ||||| ||||||| ||||||| Sbjct: 1108 aatagctcactggtcaagcgctcttgcgccgaaaatggacgggactaagcggcctgccga 1167 Query: 181 agctgtgggatgtc 194 ||||||| |||||| Sbjct: 1168 agctgtgagatgtc 1181
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 218 bits (110), Expect = 5e-54 Identities = 173/194 (89%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||||||||||||||||||| ||||| |||| |||||| | Sbjct: 114674 agggaaacagcccagatcaccagctaaggcccctaaatggccgctaagtggcaaaggatg 114615 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 114614 tgagagtgcagagacaaccaggaggtttgcctagaagcagccacccttaaaagagtgcgt 114555 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| ||||||| ||| ||| ||||| ||||||| ||||||| Sbjct: 114554 aatagctcactggtcaagcgctcttgcgccgaaaatggacgggactaagcggcctgccga 114495 Query: 181 agctgtgggatgtc 194 ||||||| |||||| Sbjct: 114494 agctgtgagatgtc 114481 Score = 218 bits (110), Expect = 5e-54 Identities = 173/194 (89%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||||||||||||||||||| ||||| |||| |||||| | Sbjct: 87314 agggaaacagcccagatcaccagctaaggcccctaaatggccgctaagtggcaaaggatg 87373 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 87374 tgagagtgcagagacaaccaggaggtttgcctagaagcagccacccttaaaagagtgcgt 87433 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| ||||||| ||| ||| ||||| ||||||| ||||||| Sbjct: 87434 aatagctcactggtcaagcgctcttgcgccgaaaatggacgggactaagcggcctgccga 87493 Query: 181 agctgtgggatgtc 194 ||||||| |||||| Sbjct: 87494 agctgtgagatgtc 87507
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 218 bits (110), Expect = 5e-54 Identities = 191/218 (87%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| || |||||| |||||||||||||| | |||| |||| |||||||| Sbjct: 4022 aggggaacagcccagaccaccagttaaggcccctaaataatcgctaagtggcaaaggagg 4081 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||||| ||||||||||||||||||| |||||||||| | |||| ||||||||||| Sbjct: 4082 tgagagtgcagagacagccaggaggtttgcttagaagcagcaatccttgaaagagtgcgt 4141 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||||||| ||||||||| |||||| Sbjct: 4142 aatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaagcgatttgccga 4201 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 | ||||||||||| || | ||| |||||||||||||| Sbjct: 4202 aactgtgggatgtttaagtacatcggtaggggagcgtt 4239
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 214 bits (108), Expect = 8e-53 Identities = 168/188 (89%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| ||||| ||||||||||| ||||||| Sbjct: 606 agggaaacagcccagaccaccagctaaggtccccaaatggtcgctcagtgattaaggagg 665 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| ||||| |||||||||||||||||||||||| | |||| ||||||||||| Sbjct: 666 tgggagtgcacagacaaccaggaggtttgcctagaagcagcaatccttgaaagagtgcgt 725 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| | ||||| ||| |||||||||||||||||| ||||||| Sbjct: 726 aatagctcactggtcaagcgctcctgcgccgaaaatgaacggggctaagcgacctgccga 785 Query: 181 agctgtgg 188 |||||||| Sbjct: 786 agctgtgg 793
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 212 bits (107), Expect = 3e-52 Identities = 170/191 (89%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||| |||| ||||| |||| ||||||||| Sbjct: 1139 agggaaacagcccagatcaccagctaaggcccctcaatggccgctaagtggtaaaggagg 1198 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | |||| | ||| ||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 1199 tgagaatgcagaaacaaccaggaggtttgcttagaagcagcaaccctttaaagagtgcgt 1258 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| | ||||| ||||||| ||| ||||||||| ||||||| |||||||| Sbjct: 1259 aatagctcactggtggagcgttcttgcgccgaaaatgaacgggactaagcggtctgccga 1318 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 1319 agctgtgggat 1329
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 212 bits (107), Expect = 3e-52 Identities = 110/111 (99%) Strand = Plus / Plus Query: 108 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 168 agcgatctgccgaagctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgtt 111
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 210 bits (106), Expect = 1e-51 Identities = 190/218 (87%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| || |||||| |||||||||||||| | |||| |||| |||||||| Sbjct: 988 aggggaacagcccagaccaccagttaaggcccctaaataatcgctaagtggcaaaggagg 1047 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||||| ||||||||||||||||||| |||||||||| | |||| ||||||||||| Sbjct: 1048 tgagagtgcagagacagccaggaggtttgcttagaagcagcaatccttgaaagagtgcgt 1107 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||| ||| ||||||||| |||||| Sbjct: 1108 aatagctcactgatcaagcgctcttgcgccgaagatgaatgggactaagcgatttgccga 1167 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 | ||||||||||| || | ||| |||||||||||||| Sbjct: 1168 aactgtgggatgtttaagtacatcggtaggggagcgtt 1205
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 204 bits (103), Expect = 8e-50 Identities = 169/191 (88%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || || | |||||||||||||||||| || |||||||||||||| Sbjct: 991 agggaaacagcccagaccatcggctaaggcccctaaatgattactaagtgataaaggagg 1050 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | |||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1051 tgagagtgcccagacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1110 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| ||||||| ||| ||||||||| ||||| ||||||||| Sbjct: 1111 aatagctcactggtcaagcgctcttgcgccgaaaatgaacgggactaagtaatctgccga 1170 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 1171 agctgtgggat 1181
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 204 bits (103), Expect = 8e-50 Identities = 166/187 (88%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||| |||||||||| ||||||||||| |||| |||||||| Sbjct: 981 agggaaacagcccagatcaccatctaaggccccaaaatgaccgctaagtggcaaaggagg 1040 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | | ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1041 taagagtgcaaagacaaccaggaggtttgcctagaagcagccacccttaaaagagtgcgt 1100 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| || |||| ||| | ||||||| ||||||| |||||||| Sbjct: 1101 aatagctcactggtcaagcgctctcgcgccgaaaacgaacgggactaagcggtctgccga 1160 Query: 181 agctgtg 187 || |||| Sbjct: 1161 agttgtg 1167
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 204 bits (103), Expect = 8e-50 Identities = 166/187 (88%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||| ||||||||||||||||| ||| |||| |||||||| Sbjct: 1008 agggaaacagcccagatcaccagttaaggcccctaaatgactgctaagtggcaaaggagg 1067 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | |||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1068 tgagagtgcttagacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1127 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| ||||||| || ||||||||| |||||| |||||||| Sbjct: 1128 aatagctcactggtcaagcgctcttgcgcctaaaatgaacgggactaagcagtctgccga 1187 Query: 181 agctgtg 187 ||||||| Sbjct: 1188 agctgtg 1194
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 204 bits (103), Expect = 8e-50 Identities = 166/187 (88%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 996 agggaaacagcccagatcaccagctaaggcccctaaatggccgctaagtgataaaggagg 1055 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||| | ||| ||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 1056 tgagaatgctgaaacaaccaggaggtttgcttagaagcagccacccttaaaagagtgcgt 1115 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| | ||||| ||||||| ||| ||||||||| ||||||| ||||||| Sbjct: 1116 aatagctcactggtggagcgttcttgcgccgaaaatgaacgggactaagcggcctgccga 1175 Query: 181 agctgtg 187 ||||||| Sbjct: 1176 agctgtg 1182
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 204 bits (103), Expect = 8e-50 Identities = 166/187 (88%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||| ||||||||||||||||| ||| |||| |||||||| Sbjct: 2777 agggaaacagcccagatcaccagttaaggcccctaaatgactgctaagtggcaaaggagg 2836 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | |||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2837 tgagagtgcttagacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 2896 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| ||||||| || ||||||||| |||||| |||||||| Sbjct: 2897 aatagctcactggtcaagcgctcttgcgcctaaaatgaacgggactaagcagtctgccga 2956 Query: 181 agctgtg 187 ||||||| Sbjct: 2957 agctgtg 2963
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 202 bits (102), Expect = 3e-49 Identities = 190/218 (87%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| || |||||| |||||||||||||| | |||| |||| |||||||| Sbjct: 988 aggggaacagcccagaccaccagttaaggcccctaaataatcgctaagtggcaaaggagg 1047 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||||| ||||||||||||||||||| |||||||||| | |||| ||||||||||| Sbjct: 1048 tgagagtgcagagacagccaggaggtttgcttagaagcagcaatccttgaaagagtgcgt 1107 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| ||||||| ||||||||| ||| ||||||||| |||||| Sbjct: 1108 aatagctcactgatcaagcgctcttgcgccgaagatgaatgggactaagcgatttgccga 1167 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 | ||||||||||| ||| ||| |||||||||||||| Sbjct: 1168 aactgtgggatgt-ttaatacatcggtaggggagcgtt 1204
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 198 bits (100), Expect = 5e-48 Identities = 167/188 (88%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| ||||||| ||| |||||||||||||| Sbjct: 604 agggaaacagcccagaccaccagctaaggtccccaaatgactgctaagtgataaaggagg 663 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||||| |||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 664 tgagagtgcactgacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 723 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| ||| ||| ||| |||||||||||||||| ||| |||| Sbjct: 724 aatagctcactggtcaagcgctctt-cgccgaaaatgaacggggctaagcagtctaccga 782 Query: 181 agctgtgg 188 |||||||| Sbjct: 783 agctgtgg 790
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 196 bits (99), Expect = 2e-47 Identities = 168/191 (87%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | | || |||||||||||||| Sbjct: 2686 agggaaacagcccagaccaccagctaaggtccccaaatcatcactaagtgataaaggagg 2745 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| ||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2746 tgggagtgcacagacaactaggaggtttgcctagaagcagccacccttgaaagagtgcgt 2805 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||| || ||||| | ||||| ||| ||||||||||||||| ||| | |||| Sbjct: 2806 aatagctcactagtcaagcgctcctgcgccgaaaatgaacggggctaagtgatgtaccga 2865 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 2866 agctgtgggat 2876
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 196 bits (99), Expect = 2e-47 Identities = 168/191 (87%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || ||||||||||||||||||||| | ||| |||||||||||||| Sbjct: 2541 agggaaacagcccagaccaccagctaaggcccctaaataattgctaagtgataaaggagg 2600 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||| ||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 2601 tgggaatgcatagacaaccaggaggtttgcttagaagcagcaaccctttaaagagtgcgt 2660 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || || | | ||||| ||| ||||||||| |||||| || |||||| Sbjct: 2661 aatagctcactggtcaagtgatcctgcgccgaaaatgaacgggactaagcaatttgccga 2720 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 2721 agctgtgggat 2731
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 194 bits (98), Expect = 8e-47 Identities = 164/186 (88%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||| ||||||||||||||| ||||| |||||||||| |||||||| Sbjct: 170495 agggaaacagcccagattaccagctaaggccccaaaatggccgctcagtggcaaaggagg 170436 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | |||| ||||| |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 170435 tgagagtgcccagacaaccaggaggtttgcctagaagcagccatccttcaaagagtgcgt 170376 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| || |||| ||| ||||||||| ||||||| ||||||| Sbjct: 170375 aatagctcactggtcaagcgctctcgcgccgaaaatgaacgggactaagcggcctgccga 170316 Query: 181 agctgt 186 |||||| Sbjct: 170315 agctgt 170310 Score = 194 bits (98), Expect = 8e-47 Identities = 164/186 (88%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||| ||||||||||||||| ||||| |||||||||| |||||||| Sbjct: 122431 agggaaacagcccagattaccagctaaggccccaaaatggccgctcagtggcaaaggagg 122490 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | |||| ||||| |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 122491 tgagagtgcccagacaaccaggaggtttgcctagaagcagccatccttcaaagagtgcgt 122550 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| || |||| ||| ||||||||| ||||||| ||||||| Sbjct: 122551 aatagctcactggtcaagcgctctcgcgccgaaaatgaacgggactaagcggcctgccga 122610 Query: 181 agctgt 186 |||||| Sbjct: 122611 agctgt 122616
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 194 bits (98), Expect = 8e-47 Identities = 164/186 (88%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||| ||||||||||||||| ||||| |||||||||| |||||||| Sbjct: 1022 agggaaacagcccagattaccagctaaggccccaaaatggccgctcagtggcaaaggagg 1081 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | |||| ||||| |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1082 tgagagtgcccagacaaccaggaggtttgcctagaagcagccatccttgaaagagtgcgt 1141 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| || |||| ||| ||||||||| ||||||| ||||||| Sbjct: 1142 aatagctcactggtcaagcgctctcgcgccgaaaatgaacgggactaagcggcctgccga 1201 Query: 181 agctgt 186 |||||| Sbjct: 1202 agctgt 1207
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 194 bits (98), Expect = 8e-47 Identities = 101/102 (99%) Strand = Plus / Plus Query: 117 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 176 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 60 Query: 177 ccgaagctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||||||||||||||||||||||||| |||||||||||||| Sbjct: 61 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgtt 102
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 192 bits (97), Expect = 3e-46 Identities = 166/189 (87%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||||||||||||| ||||||||||| |||| |||||| | Sbjct: 1126 agggaaacagcccagatcaccagctaaggccccaaaatgaccgctaagtggcaaaggatg 1185 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||| | ||| |||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 1186 tgagaatgctgaaacaaccagaaggtttgcttagaagcagccaccctttaaagagtgcgt 1245 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| | ||||| ||||||| ||| ||||||||| ||||||| |||||||| Sbjct: 1246 aatagctcactggtagagcgttcttgcgccgaaaatgaacgggactaagcggtctgccga 1305 Query: 181 agctgtggg 189 ||||||||| Sbjct: 1306 agctgtggg 1314
>gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genomic sequence, complete sequence Length = 114068 Score = 192 bits (97), Expect = 3e-46 Identities = 125/133 (93%), Gaps = 1/133 (0%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| Sbjct: 57138 agggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaaggagg 57079 Query: 61 tgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagtgcg 119 | |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| ||| Sbjct: 57078 taggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagcgcg 57019 Query: 120 taatagctcactg 132 ||||||||||||| Sbjct: 57018 taatagctcactg 57006
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 192 bits (97), Expect = 3e-46 Identities = 125/133 (93%), Gaps = 1/133 (0%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| Sbjct: 129344 agggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaaggagg 129285 Query: 61 tgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagtgcg 119 | |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| ||| Sbjct: 129284 taggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagcgcg 129225 Query: 120 taatagctcactg 132 ||||||||||||| Sbjct: 129224 taatagctcactg 129212 Score = 48.1 bits (24), Expect = 0.011 Identities = 51/60 (85%) Strand = Plus / Minus Query: 73 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 132 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 192 bits (97), Expect = 3e-46 Identities = 169/193 (87%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||| ||||||||| |||| | ||| |||| ||||||||| Sbjct: 1434 agggaaacagcccagaccaccagttaaggccccaaaataatagctaagtggtaaaggagg 1493 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||| |||||||||||||||||||||||| | |||||||||||||||| Sbjct: 1494 tgggagtgcttagacaaccaggaggtttgcctagaagcagcaatcctttaaagagtgcgt 1553 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| ||||||| ||| ||||| ||| |||||| || |||||| Sbjct: 1554 aatagctcactggtcaagcgctcttgcgccgaaaatgaaagggactaagctatttgccga 1613 Query: 181 agctgtgggatgt 193 ||||||||||||| Sbjct: 1614 agctgtgggatgt 1626
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 188 bits (95), Expect = 5e-45 Identities = 168/191 (87%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | |||| |||||||||||||| Sbjct: 603 agggaaacagcccagaccaccagctaaggtccccaaatcatcgctaagtgataaaggagg 662 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||||| ||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 663 tgagagtgcacagacaactaggaggtttgcctagaagcagccacccttgaaagagtgcgt 722 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||| || ||||| | | ||| ||| ||||||||||||||||||| | |||| Sbjct: 723 aatagctcactagtcaagcgctcct-cgccgaaaatgaacggggctaagcgatgtaccga 781 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 782 agctgtgggat 792
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 188 bits (95), Expect = 5e-45 Identities = 168/191 (87%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | |||| ||||| |||||||| Sbjct: 603 agggaaacagcccagaccaccagctaaggtccccaaatcatcgctaagtgagaaaggagg 662 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||||| ||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 663 tgagagtgcatagacaactaggaggtttgcctagaagcagccacccttgaaagagtgcgt 722 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||| || ||||| ||| ||| ||| ||||||||||||||||||| | |||| Sbjct: 723 aatagctcactagtcaagcgctctt-cgccgaaaatgaacggggctaagcgatgtaccga 781 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 782 agctgtgggat 792
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 188 bits (95), Expect = 5e-45 Identities = 167/191 (87%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | |||| |||||||||||||| Sbjct: 603 agggaaacagcccagaccaccagctaaggtccccaaatcatcgctaagtgataaaggagg 662 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||| ||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 663 tgagattgcctagacaactaggaggtttgcctagaagcagccacccttgaaagagtgcgt 722 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||| || |||| ||||||| ||| ||||||||||||||||||| | |||| Sbjct: 723 aatagctcactagtcaagcgatcttgcgccgaaaatgaacggggctaagcgatgtaccga 782 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 783 agctgtgggat 793
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 188 bits (95), Expect = 5e-45 Identities = 167/191 (87%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | |||| |||||||||||||| Sbjct: 5434381 agggaaacagcccagaccaccagctaaggtccccaaatcatcgctaagtgataaaggagg 5434322 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||| ||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5434321 tgagattgcctagacaactaggaggtttgcctagaagcagccacccttgaaagagtgcgt 5434262 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||| || |||| ||||||| ||| ||||||||||||||||||| | |||| Sbjct: 5434261 aatagctcactagtcaagcgatcttgcgccgaaaatgaacggggctaagcgatgtaccga 5434202 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 5434201 agctgtgggat 5434191 Score = 188 bits (95), Expect = 5e-45 Identities = 167/191 (87%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | |||| |||||||||||||| Sbjct: 3897057 agggaaacagcccagaccaccagctaaggtccccaaatcatcgctaagtgataaaggagg 3897116 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||| ||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 3897117 tgagattgcctagacaactaggaggtttgcctagaagcagccacccttgaaagagtgcgt 3897176 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||| || |||| ||||||| ||| ||||||||||||||||||| | |||| Sbjct: 3897177 aatagctcactagtcaagcgatcttgcgccgaaaatgaacggggctaagcgatgtaccga 3897236 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 3897237 agctgtgggat 3897247 Score = 188 bits (95), Expect = 5e-45 Identities = 167/191 (87%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | |||| |||||||||||||| Sbjct: 2807102 agggaaacagcccagaccaccagctaaggtccccaaatcatcgctaagtgataaaggagg 2807043 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||| ||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2807042 tgagattgcctagacaactaggaggtttgcctagaagcagccacccttgaaagagtgcgt 2806983 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||| || |||| ||||||| ||| ||||||||||||||||||| | |||| Sbjct: 2806982 aatagctcactagtcaagcgatcttgcgccgaaaatgaacggggctaagcgatgtaccga 2806923 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 2806922 agctgtgggat 2806912 Score = 188 bits (95), Expect = 5e-45 Identities = 167/191 (87%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | |||| |||||||||||||| Sbjct: 1005900 agggaaacagcccagaccaccagctaaggtccccaaatcatcgctaagtgataaaggagg 1005959 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||| ||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1005960 tgagattgcctagacaactaggaggtttgcctagaagcagccacccttgaaagagtgcgt 1006019 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||| || |||| ||||||| ||| ||||||||||||||||||| | |||| Sbjct: 1006020 aatagctcactagtcaagcgatcttgcgccgaaaatgaacggggctaagcgatgtaccga 1006079 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 1006080 agctgtgggat 1006090
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 188 bits (95), Expect = 5e-45 Identities = 167/191 (87%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||||||||||||| ||||| |||| |||||||| Sbjct: 1023 agggaaacagcccagaccaccagctaaggcccctaaatggccgctaagtggcaaaggagg 1082 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || |||||||||| |||| |||||||| ||||||||||||||||| ||||||||||| Sbjct: 1083 tgaaaatgcaaagacaaccagaaggtttgcttagaagcagccacccttaaaagagtgcgt 1142 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| | ||||| |||||| ||| ||||||||| ||||||| ||||||| Sbjct: 1143 aatagctcactggtagagcgtttttgcgccgaaaatgaacgggactaagcggcctgccga 1202 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 1203 agctgtgggat 1213
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 188 bits (95), Expect = 5e-45 Identities = 167/191 (87%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | |||| |||||||||||||| Sbjct: 5944421 agggaaacagcccagaccaccagctaaggtccccaaatcatcgctaagtgataaaggagg 5944362 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||| ||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5944361 tgagattgcctagacaactaggaggtttgcctagaagcagccacccttgaaagagtgcgt 5944302 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||| || |||| ||||||| ||| ||||||||||||||||||| | |||| Sbjct: 5944301 aatagctcactagtcaagcgatcttgcgccgaaaatgaacggggctaagcgatgtaccga 5944242 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 5944241 agctgtgggat 5944231 Score = 188 bits (95), Expect = 5e-45 Identities = 167/191 (87%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | |||| |||||||||||||| Sbjct: 4916777 agggaaacagcccagaccaccagctaaggtccccaaatcatcgctaagtgataaaggagg 4916718 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||| ||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4916717 tgagattgcctagacaactaggaggtttgcctagaagcagccacccttgaaagagtgcgt 4916658 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||| || |||| ||||||| ||| ||||||||||||||||||| | |||| Sbjct: 4916657 aatagctcactagtcaagcgatcttgcgccgaaaatgaacggggctaagcgatgtaccga 4916598 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 4916597 agctgtgggat 4916587 Score = 188 bits (95), Expect = 5e-45 Identities = 167/191 (87%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | |||| |||||||||||||| Sbjct: 2503519 agggaaacagcccagaccaccagctaaggtccccaaatcatcgctaagtgataaaggagg 2503578 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||| ||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2503579 tgagattgcctagacaactaggaggtttgcctagaagcagccacccttgaaagagtgcgt 2503638 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||| || |||| ||||||| ||| ||||||||||||||||||| | |||| Sbjct: 2503639 aatagctcactagtcaagcgatcttgcgccgaaaatgaacggggctaagcgatgtaccga 2503698 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 2503699 agctgtgggat 2503709 Score = 188 bits (95), Expect = 5e-45 Identities = 167/191 (87%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | |||| |||||||||||||| Sbjct: 2378728 agggaaacagcccagaccaccagctaaggtccccaaatcatcgctaagtgataaaggagg 2378787 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||| ||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2378788 tgagattgcctagacaactaggaggtttgcctagaagcagccacccttgaaagagtgcgt 2378847 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||| || |||| ||||||| ||| ||||||||||||||||||| | |||| Sbjct: 2378848 aatagctcactagtcaagcgatcttgcgccgaaaatgaacggggctaagcgatgtaccga 2378907 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 2378908 agctgtgggat 2378918
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 182 bits (92), Expect = 3e-43 Identities = 164/188 (87%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||||| || ||||| |||||||| Sbjct: 2518 agggaaacagcccagaccaccagctaaggtccccaaatgataactaagtgagaaaggagg 2577 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| |||| |||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 2578 tgggagtgcattgacaaccaggaggtttgcctagaagcagcaacccttaaaagagtgcgt 2637 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| | ||||| ||| ||||||||||||||| |||| |||| Sbjct: 2638 aatagctcactggtcaagcgctcctgcgccgaaaatgaacggggctaagttatctaccga 2697 Query: 181 agctgtgg 188 |||||||| Sbjct: 2698 agctgtgg 2705
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 180 bits (91), Expect = 1e-42 Identities = 167/191 (87%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | ||| |||||||||||||| Sbjct: 603 agggaaacagcccagaccaccagctaaggtccccaaatcattgctaagtgataaaggagg 662 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| ||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 663 tgggagtgcagagacaactaggaggtttgcctagaagcagccacccttaaaagagtgcgt 722 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||| || ||||| | | ||| ||| |||||||||||||||| || | |||| Sbjct: 723 aatagctcactagtcaagcgctcct-cgccgaaaatgaacggggctaagcaatgtaccga 781 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 782 agctgtgggat 792
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 180 bits (91), Expect = 1e-42 Identities = 166/191 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | | || |||||||||||||| Sbjct: 603 agggaaacagcccagaccaccagctaaggtccccaaatcatcactaagtgataaaggagg 662 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | |||| ||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 663 tgagattgcatagacaactaggaggtttgcctagaagcagccacccttgaaagagtgcgt 722 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||| || |||| ||||||| ||| ||||||||||||||| ||| | |||| Sbjct: 723 aatagctcactagtcaagcggtcttgcgccgaaaatgaacggggctaagtgatgtaccga 782 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 783 agctgtgggat 793
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 180 bits (91), Expect = 1e-42 Identities = 187/218 (85%), Gaps = 2/218 (0%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||| ||||| |||||||||||||| | || |||||||||||||| Sbjct: 18058 agggaaacagcccagattaccagttaaggcccctaaataattactaagtgataaaggagg 17999 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| ||||| ||||||||||||||||||||||| | |||||||||||||||| Sbjct: 17998 tgggagtgcatagacaatcaggaggtttgcctagaagcagcaatcctttaaagagtgcgt 17939 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| ||||| || | ||||| ||| ||||| ||| ||||| || |||||| Sbjct: 17938 aatagctcactgttcgagtgctcctgcgccgaaaatgaatgggactaagtaatttgccga 17879 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||| ||||| |||| ||| |||||||||||||| Sbjct: 17878 agctgtaagatgttaaaa--catcggtaggggagcgtt 17843 Score = 180 bits (91), Expect = 1e-42 Identities = 187/218 (85%), Gaps = 2/218 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||| ||||| |||||||||||||| | || |||||||||||||| Sbjct: 2808 agggaaacagcccagattaccagttaaggcccctaaataattactaagtgataaaggagg 2867 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| ||||| ||||||||||||||||||||||| | |||||||||||||||| Sbjct: 2868 tgggagtgcatagacaatcaggaggtttgcctagaagcagcaatcctttaaagagtgcgt 2927 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| ||||| || | ||||| ||| ||||| ||| ||||| || |||||| Sbjct: 2928 aatagctcactgttcgagtgctcctgcgccgaaaatgaatgggactaagtaatttgccga 2987 Query: 181 agctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||| ||||| |||| ||| |||||||||||||| Sbjct: 2988 agctgtaagatgttaaaa--catcggtaggggagcgtt 3023
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 180 bits (91), Expect = 1e-42 Identities = 166/191 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||| ||||||||||||| |||| ||||| |||| ||||||||| Sbjct: 969 agggaaacagcccagatcatcagctaaggccccagaatggccgctaagtggtaaaggagg 1028 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | |||| | ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1029 tgagaatgcagaaacagccaggaggtttgcttagaagcagccaccctttaaagagtgcgt 1088 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| | ||||| ||||||| ||| || ||||| ||||||| ||||||| Sbjct: 1089 aatagctcactggtggagcgttcttgcgccgaaaattcacgggactaagcggcctgccga 1148 Query: 181 agctgtgggat 191 |||| |||||| Sbjct: 1149 agctatgggat 1159
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 180 bits (91), Expect = 1e-42 Identities = 189/219 (86%), Gaps = 2/219 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| || || | ||||||||||| ||||| ||||| |||| |||||| | Sbjct: 978 aggggaacagcccagaccatcggctaaggcccccaaatggccgctaagtggcaaaggatg 1037 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1038 tgggagtgctcagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 1097 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggct-aagcgatctgccg 179 ||||||||||||||| ||||| | |||| |||||||||||| || ||||| |||||| Sbjct: 1098 aatagctcactgatcaagcgctcccgcgccaaagatgaacgggactcaagcggcctgccg 1157 Query: 180 aagctgtgggatgtcaaaatgcataggtaggggagcgtt 218 | || |||||||| |||| |||| |||||||||||||| Sbjct: 1158 aggccatgggatgt-aaaaagcatcggtaggggagcgtt 1195
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 180 bits (91), Expect = 1e-42 Identities = 189/219 (86%), Gaps = 2/219 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| || || | ||||||||||| ||||| ||||| |||| |||||| | Sbjct: 991 aggggaacagcccagaccatcggctaaggcccccaaatggccgctaagtggcaaaggatg 1050 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1051 tgggagtgctcagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 1110 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggct-aagcgatctgccg 179 ||||||||||||||| ||||| | |||| |||||||||||| || ||||| |||||| Sbjct: 1111 aatagctcactgatcaagcgctcccgcgccaaagatgaacgggactcaagcggcctgccg 1170 Query: 180 aagctgtgggatgtcaaaatgcataggtaggggagcgtt 218 | || |||||||| |||| |||| |||||||||||||| Sbjct: 1171 aggccatgggatgt-aaaaagcatcggtaggggagcgtt 1208
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 180 bits (91), Expect = 1e-42 Identities = 189/219 (86%), Gaps = 2/219 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| || || | ||||||||||| ||||| ||||| |||| |||||| | Sbjct: 5565 aggggaacagcccagaccatcggctaaggcccccaaatggccgctaagtggcaaaggatg 5624 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5625 tgggagtgctcagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 5684 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggct-aagcgatctgccg 179 ||||||||||||||| ||||| | |||| |||||||||||| || ||||| |||||| Sbjct: 5685 aatagctcactgatcaagcgctcccgcgccaaagatgaacgggactcaagcggcctgccg 5744 Query: 180 aagctgtgggatgtcaaaatgcataggtaggggagcgtt 218 | || |||||||| |||| |||| |||||||||||||| Sbjct: 5745 aggccatgggatgt-aaaaagcatcggtaggggagcgtt 5782
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 176 bits (89), Expect = 2e-41 Identities = 149/169 (88%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| || ||||||||||||||||| Sbjct: 603 agggaaacagcccagaccaccagctaaggtccccaaataacacctcagtgataaaggagg 662 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||| |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 663 tgggaatgcagagacaaccaggaggtttgcctagaagcagccatccttaaaagagtgcgt 722 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 169 |||||||||||| || |||| | ||||| ||| ||||||||||||||| Sbjct: 723 aatagctcactggtcaagcgttcctgcgccgaaaatgaacggggctaag 771
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 176 bits (89), Expect = 2e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||| ||| |||||| ||||||||||||||||||||| || ||| |||||||||| Sbjct: 984 aggggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggagg 1043 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||| Sbjct: 1044 taggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgt 1103 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||| Sbjct: 1104 aatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccga 1163 Query: 181 agctgtgggatgt 193 ||| ||||||||| Sbjct: 1164 agccgtgggatgt 1176
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 176 bits (89), Expect = 2e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||| ||| |||||| ||||||||||||||||||||| || ||| |||||||||| Sbjct: 985 aggggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggagg 1044 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||| Sbjct: 1045 taggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgt 1104 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||| Sbjct: 1105 aatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccga 1164 Query: 181 agctgtgggatgt 193 ||| ||||||||| Sbjct: 1165 agccgtgggatgt 1177
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 176 bits (89), Expect = 2e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||| ||| |||||| ||||||||||||||||||||| || ||| |||||||||| Sbjct: 985 aggggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggagg 1044 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||| Sbjct: 1045 taggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgt 1104 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||| Sbjct: 1105 aatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccga 1164 Query: 181 agctgtgggatgt 193 ||| ||||||||| Sbjct: 1165 agccgtgggatgt 1177
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 176 bits (89), Expect = 2e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||| ||| |||||| ||||||||||||||||||||| || ||| |||||||||| Sbjct: 985 aggggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggagg 1044 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||| Sbjct: 1045 taggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgt 1104 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||| Sbjct: 1105 aatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccga 1164 Query: 181 agctgtgggatgt 193 ||| ||||||||| Sbjct: 1165 agccgtgggatgt 1177
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 176 bits (89), Expect = 2e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||| ||| |||||| ||||||||||||||||||||| || ||| |||||||||| Sbjct: 985 aggggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggagg 1044 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||| Sbjct: 1045 taggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgt 1104 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||| Sbjct: 1105 aatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccga 1164 Query: 181 agctgtgggatgt 193 ||| ||||||||| Sbjct: 1165 agccgtgggatgt 1177
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 176 bits (89), Expect = 2e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||| ||| |||||| ||||||||||||||||||||| || ||| |||||||||| Sbjct: 984 aggggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggagg 1043 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||| Sbjct: 1044 taggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgt 1103 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||| Sbjct: 1104 aatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccga 1163 Query: 181 agctgtgggatgt 193 ||| ||||||||| Sbjct: 1164 agccgtgggatgt 1176
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 176 bits (89), Expect = 2e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||| ||| |||||| ||||||||||||||||||||| || ||| |||||||||| Sbjct: 985 aggggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggagg 1044 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||| Sbjct: 1045 taggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgt 1104 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||| Sbjct: 1105 aatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccga 1164 Query: 181 agctgtgggatgt 193 ||| ||||||||| Sbjct: 1165 agccgtgggatgt 1177
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 176 bits (89), Expect = 2e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||| ||| |||||| ||||||||||||||||||||| || ||| |||||||||| Sbjct: 985 aggggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggagg 1044 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||| Sbjct: 1045 taggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgt 1104 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||| Sbjct: 1105 aatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccga 1164 Query: 181 agctgtgggatgt 193 ||| ||||||||| Sbjct: 1165 agccgtgggatgt 1177
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 176 bits (89), Expect = 2e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||| ||| |||||| ||||||||||||||||||||| || ||| |||||||||| Sbjct: 984 aggggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggagg 1043 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||| Sbjct: 1044 taggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgt 1103 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||| Sbjct: 1104 aatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccga 1163 Query: 181 agctgtgggatgt 193 ||| ||||||||| Sbjct: 1164 agccgtgggatgt 1176
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 176 bits (89), Expect = 2e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||| ||| |||||| ||||||||||||||||||||| || ||| |||||||||| Sbjct: 985 aggggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggagg 1044 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||| Sbjct: 1045 taggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgt 1104 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||| Sbjct: 1105 aatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccga 1164 Query: 181 agctgtgggatgt 193 ||| ||||||||| Sbjct: 1165 agccgtgggatgt 1177
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 176 bits (89), Expect = 2e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||| ||| |||||| ||||||||||||||||||||| || ||| |||||||||| Sbjct: 985 aggggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggagg 1044 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||| Sbjct: 1045 taggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgt 1104 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||| Sbjct: 1105 aatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccga 1164 Query: 181 agctgtgggatgt 193 ||| ||||||||| Sbjct: 1165 agccgtgggatgt 1177
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 176 bits (89), Expect = 2e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||| ||| |||||| ||||||||||||||||||||| || ||| |||||||||| Sbjct: 985 aggggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggagg 1044 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||| Sbjct: 1045 taggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgt 1104 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||| Sbjct: 1105 aatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccga 1164 Query: 181 agctgtgggatgt 193 ||| ||||||||| Sbjct: 1165 agccgtgggatgt 1177
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 176 bits (89), Expect = 2e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||| ||| |||||| ||||||||||||||||||||| || ||| |||||||||| Sbjct: 985 aggggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggagg 1044 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||| Sbjct: 1045 taggggtgcataaacaaccaggaagtttgcctagaaggagccaccttttaaagagtgcgt 1104 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||| Sbjct: 1105 aatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccga 1164 Query: 181 agctgtgggatgt 193 ||| ||||||||| Sbjct: 1165 agccgtgggatgt 1177
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 176 bits (89), Expect = 2e-41 Identities = 164/189 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||| |||||||||||||| |||| ||||| |||| |||||||| Sbjct: 1059 agggaaacagcccagatcatcagctaaggcccctgaatggccgctaagtggcaaaggagg 1118 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1119 tgagaatgctgaaacaaccaggaggtttgcttagaagcagccaccctttaaagagtgcgt 1178 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| | |||| ||||||| ||| ||||||||| ||||||| ||||||| Sbjct: 1179 aatagctcactggtaaagcgttcttgcgccgaaaatgaacgggactaagcggcctgccga 1238 Query: 181 agctgtggg 189 ||||||||| Sbjct: 1239 agctgtggg 1247
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 176 bits (89), Expect = 2e-41 Identities = 167/193 (86%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||| |||||||||||||| ||| |||| |||||||| Sbjct: 114446 agggaaacagcccagaccaccagttaaggcccctaaatagtagctaagtggcaaaggagg 114387 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||| |||||||||||||||||||||||| | |||||||||||||||| Sbjct: 114386 tgggagtgcttagacaaccaggaggtttgcctagaagcagcaatcctttaaagagtgcgt 114327 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| | ||||| ||| ||||| ||| |||||| || |||||| Sbjct: 114326 aatagctcactggtcaagcgctcctgcgccgaaaatgaatgggactaagctatttgccga 114267 Query: 181 agctgtgggatgt 193 ||||||||||||| Sbjct: 114266 agctgtgggatgt 114254 Score = 176 bits (89), Expect = 2e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||| |||||||||||||| ||| |||| |||||||| Sbjct: 3071 agggaaacagcccagaccaccagttaaggcccctaaatagtagctaagtggcaaaggagg 3130 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||| |||||||||||||||||||||||| | |||||||||||||||| Sbjct: 3131 tgggagtgcttagacaaccaggaggtttgcctagaagcagcaatcctttaaagagtgcgt 3190 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| | ||||| ||| ||||| ||| |||||| || |||||| Sbjct: 3191 aatagctcactggtcaagcgctcctgcgccgaaaatgaatgggactaagctatttgccga 3250 Query: 181 agctgtgggatgt 193 ||||||||||||| Sbjct: 3251 agctgtgggatgt 3263
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 176 bits (89), Expect = 2e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || ||||||||||||||||||||| | ||| |||| |||||||| Sbjct: 189908 agggaaacagcccagaccaccagctaaggcccctaaataattgctaagtggcaaaggagg 189967 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||| ||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 189968 tgggaatgcatagacaaccaggaggtttgcttagaagcagcaaccctttaaagagtgcgt 190027 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || || | | ||||| ||| ||||||||| ||||| || |||||| Sbjct: 190028 aatagctcactggtcaagtgatcctgcgccgaaaatgaacgggactaagtaatttgccga 190087 Query: 181 agctgtgggatgt 193 ||||||||||||| Sbjct: 190088 agctgtgggatgt 190100 Score = 176 bits (89), Expect = 2e-41 Identities = 167/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || ||||||||||||||||||||| | ||| |||| |||||||| Sbjct: 151335 agggaaacagcccagaccaccagctaaggcccctaaataattgctaagtggcaaaggagg 151394 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||| ||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 151395 tgggaatgcatagacaaccaggaggtttgcttagaagcagcaaccctttaaagagtgcgt 151454 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || || | | ||||| ||| ||||||||| ||||| || |||||| Sbjct: 151455 aatagctcactggtcaagtgatcctgcgccgaaaatgaacgggactaagtaatttgccga 151514 Query: 181 agctgtgggatgt 193 ||||||||||||| Sbjct: 151515 agctgtgggatgt 151527
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 174 bits (88), Expect = 7e-41 Identities = 164/188 (87%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||||| || ||||| |||||||| Sbjct: 602 agggaaacagcccagaccaccagctaaggtccccaaatgataactaagtgagaaaggagg 661 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| |||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 662 tgggagtgcattgacaaccaggaggtttgcctagaagcagccacccttaaaagagtgcgt 721 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| | | ||| ||| ||||||||||||||| |||| |||| Sbjct: 722 aatagctcactggtcaagcgctcct-cgccgaaaatgaacggggctaagttatctaccga 780 Query: 181 agctgtgg 188 |||||||| Sbjct: 781 agctgtgg 788
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 174 bits (88), Expect = 7e-41 Identities = 163/188 (86%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || ||||| |||||||||| || | ||||||||||| ||||||| Sbjct: 2050869 agggaaacagcccagaccaccaactaaggcccccaagccatcgctcagtgattaaggagg 2050810 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 ||||||||| ||||| |||||||||| || ||||||||||||||||||||| ||||||| Sbjct: 2050809 tgggggtgcccagacaaccaggaggttggcttagaagcagccaccctttaaacagtgcgt 2050750 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 || |||| |||| || ||||||||||||| ||| ||| ||||||||||||||| ||||| Sbjct: 2050749 aacagctgactggtcaagcgcccttgcgccgaaaatggacggggctaagcgatgcgccga 2050690 Query: 181 agctgtgg 188 || ||||| Sbjct: 2050689 agttgtgg 2050682 Score = 174 bits (88), Expect = 7e-41 Identities = 163/188 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || ||||| |||||||||| || | ||||||||||| ||||||| Sbjct: 1450632 agggaaacagcccagaccaccaactaaggcccccaagccatcgctcagtgattaaggagg 1450691 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 ||||||||| ||||| |||||||||| || ||||||||||||||||||||| ||||||| Sbjct: 1450692 tgggggtgcccagacaaccaggaggttggcttagaagcagccaccctttaaacagtgcgt 1450751 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 || |||| |||| || ||||||||||||| ||| ||| ||||||||||||||| ||||| Sbjct: 1450752 aacagctgactggtcaagcgcccttgcgccgaaaatggacggggctaagcgatgcgccga 1450811 Query: 181 agctgtgg 188 || ||||| Sbjct: 1450812 agttgtgg 1450819
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 174 bits (88), Expect = 7e-41 Identities = 163/188 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | | || ||||| |||||||| Sbjct: 3328001 agggaaacagcccagaccaccagctaaggtccccaaatcatcactaagtgagaaaggagg 3328060 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| |||| |||||||||||||||||||||||| | |||| ||||||||||| Sbjct: 3328061 tgggagtgcattgacaaccaggaggtttgcctagaagcagcaatccttaaaagagtgcgt 3328120 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| | ||||| ||| ||||||||||||||| ||| | |||| Sbjct: 3328121 aatagctcactggtcaagcgctcctgcgccgaaaatgaacggggctaagtgatgtaccga 3328180 Query: 181 agctgtgg 188 |||||||| Sbjct: 3328181 agctgtgg 3328188 Score = 174 bits (88), Expect = 7e-41 Identities = 163/188 (86%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | | || ||||| |||||||| Sbjct: 2450727 agggaaacagcccagaccaccagctaaggtccccaaatcatcactaagtgagaaaggagg 2450668 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| |||| |||||||||||||||||||||||| | |||| ||||||||||| Sbjct: 2450667 tgggagtgcattgacaaccaggaggtttgcctagaagcagcaatccttaaaagagtgcgt 2450608 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| | ||||| ||| ||||||||||||||| ||| | |||| Sbjct: 2450607 aatagctcactggtcaagcgctcctgcgccgaaaatgaacggggctaagtgatgtaccga 2450548 Query: 181 agctgtgg 188 |||||||| Sbjct: 2450547 agctgtgg 2450540
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 172 bits (87), Expect = 3e-40 Identities = 166/191 (86%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | |||| |||||||||||||| Sbjct: 603 agggaaacagcccagaccaccagctaaggtccccaaatcatcgctaagtgataaaggagg 662 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||| ||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 663 tgagattgcctagacaactaggaggtttgcctagaagcagccacccttgaaagagtgcgt 722 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||| || |||| ||| ||| ||| ||||||||||||||||||| | |||| Sbjct: 723 aatagctcactagtcaagcgatctt-cgccgaaaatgaacggggctaagcgatgtaccga 781 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 782 agctgtgggat 792
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 172 bits (87), Expect = 3e-40 Identities = 162/187 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | |||| | |||||||||||| Sbjct: 603 agggaaacagcccagaccaccagctaaggtccccaaatcagcgctaattgataaaggagg 662 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| ||||| | ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 663 tgggagtgcatagacaactaggaggtttgcctagaagcagccacccttaaaagagtgcgt 722 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||| || ||||| | ||||| ||| |||||||||||| ||| || | |||| Sbjct: 723 aatagctcactagtcaagcgctcctgcgccgaatatgaacggggctgagccatgtaccga 782 Query: 181 agctgtg 187 | ||||| Sbjct: 783 aactgtg 789
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 172 bits (87), Expect = 3e-40 Identities = 165/191 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||||||||||||| ||||| |||| |||||||| Sbjct: 192854 agggaaacagcccagaccaccagctaaggcccctaaatggccgctaagtggcaaaggagg 192913 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || |||| ||||| |||| |||||||| |||||||||||| |||| ||||||||||| Sbjct: 192914 tgaaaatgcagagacaaccagaaggtttgcttagaagcagccatccttaaaagagtgcgt 192973 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| | ||||| |||||| ||| ||||||||| ||||||| ||||||| Sbjct: 192974 aatagctcactggtagagcgtttttgcgccgaaaatgaacgggactaagcggcctgccga 193033 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 193034 agctgtgggat 193044 Score = 172 bits (87), Expect = 3e-40 Identities = 165/191 (86%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||||||||||||| ||||| |||| |||||||| Sbjct: 143928 agggaaacagcccagaccaccagctaaggcccctaaatggccgctaagtggcaaaggagg 143869 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || |||| ||||| |||| |||||||| |||||||||||| |||| ||||||||||| Sbjct: 143868 tgaaaatgcagagacaaccagaaggtttgcttagaagcagccatccttaaaagagtgcgt 143809 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| | ||||| |||||| ||| ||||||||| ||||||| ||||||| Sbjct: 143808 aatagctcactggtagagcgtttttgcgccgaaaatgaacgggactaagcggcctgccga 143749 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 143748 agctgtgggat 143738
>gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit ribosomal RNA gene, partial sequence; and putative protein genes, complete cds; chloroplast Length = 6151 Score = 172 bits (87), Expect = 3e-40 Identities = 162/187 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||||||| | || |||| ||||||||| Sbjct: 998 agggaaacagcccagatcaccagctaaggcccctaaataagtactaagtggtaaaggagg 1057 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| |||||||||| ||||||||||||||||||||| |||| || |||||||| Sbjct: 1058 tgggagtgctaagacagccaaaaggtttgcctagaagcagccatccttgaacgagtgcgt 1117 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 || |||||| || |||||||| ||||||| ||| ||||||||| ||||| | |||||| Sbjct: 1118 aacagctcattggtcgagcgctcttgcgccgaaaatgaacgggactaagtactttgccga 1177 Query: 181 agctgtg 187 ||||||| Sbjct: 1178 agctgtg 1184
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 172 bits (87), Expect = 3e-40 Identities = 165/191 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||| |||||||||||| |||||| || | ||||| |||||||| Sbjct: 981 agggaaacagcccagatcactagctaaggccccaaaatgatcgttaagtgacaaaggagg 1040 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | |||| | ||| ||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 1041 tgagaatgcagaaacaaccaggaggtttgcttagaagcagccatcctttaaagagtgcgt 1100 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| | ||||| ||||||| ||| ||| |||| |||| |||||||||| Sbjct: 1101 aatagctcactggtggagcgttcttgcgccgaaaatgtccgggactaaatgatctgccga 1160 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 1161 agctgtgggat 1171
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 172 bits (87), Expect = 3e-40 Identities = 165/191 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||| |||||||||||| |||||| || | ||||| |||||||| Sbjct: 25790 agggaaacagcccagatcactagctaaggccccaaaatgatcgttaagtgacaaaggagg 25849 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | |||| | ||| ||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 25850 tgagaatgcagaaacaaccaggaggtttgcttagaagcagccatcctttaaagagtgcgt 25909 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| | ||||| ||||||| ||| ||| |||| |||| |||||||||| Sbjct: 25910 aatagctcactggtggagcgttcttgcgccgaaaatgtccgggactaaatgatctgccga 25969 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 25970 agctgtgggat 25980
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 170 bits (86), Expect = 1e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| |||||||||| ||||||| Sbjct: 602 agggaaacagcccagaccaccagctaaggtccccaaattgtagctcagtgattaaggagg 661 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 662 tgggattgcacagacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgt 721 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 170 |||||||||||| || |||| | ||||| ||| |||||||||||||||| Sbjct: 722 aatagctcactggtcaagcgatcctgcgccgaaaatgaacggggctaagc 771
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 168 bits (85), Expect = 5e-39 Identities = 149/169 (88%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| ||| || ||||| |||||||| Sbjct: 604 agggaaacagcccagaccaccagctaaggtccccaaataaccactaagtgagaaaggagg 663 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 664 tgggagtgcacagacaaccaggaggtttgcctagaagcagccatccttgaaagagtgcgt 723 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 169 |||||||||||| || ||||| | | ||| ||| ||||||||||||||| Sbjct: 724 aatagctcactggtcaagcgctcct-cgccgaaaatgaacggggctaag 771
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 168 bits (85), Expect = 5e-39 Identities = 166/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||| ||| |||||| ||||||||||||||||||||| || ||| |||||||||| Sbjct: 985 aggggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggagg 1044 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| | ||| |||||| ||||||||||||| |||||| |||||||||||||| Sbjct: 1045 taggggtgcataaacaaccaggaagtttgcctagaagaggccaccttttaaagagtgcgt 1104 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||| Sbjct: 1105 aatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccga 1164 Query: 181 agctgtgggatgt 193 ||| ||||||||| Sbjct: 1165 agccgtgggatgt 1177
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 168 bits (85), Expect = 5e-39 Identities = 166/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||| ||| |||||| ||||||||||||||||||||| || ||| |||||||||| Sbjct: 985 aggggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggagg 1044 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| | ||| |||||| | ||||||||||| ||||||| |||||||||||||| Sbjct: 1045 taggggtgcataaacaaccaggaagcttgcctagaagaagccaccttttaaagagtgcgt 1104 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||| Sbjct: 1105 aatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccga 1164 Query: 181 agctgtgggatgt 193 ||| ||||||||| Sbjct: 1165 agccgtgggatgt 1177
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 168 bits (85), Expect = 5e-39 Identities = 166/193 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||| ||| |||||| ||||||||||||||||||||| || ||| |||||||||| Sbjct: 985 aggggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggagg 1044 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 | |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||| Sbjct: 1045 taggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgt 1104 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||| |||||||||| || |||| || ||| ||||||||| || || ||| |||| Sbjct: 1105 aatagctaactgatcgagtgctcttgtgccgaatatgaacgggaataggcaatccaccga 1164 Query: 181 agctgtgggatgt 193 ||| ||||||||| Sbjct: 1165 agccgtgggatgt 1177
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 168 bits (85), Expect = 5e-39 Identities = 148/169 (87%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| || |||| | || |||||||||||||| Sbjct: 1659480 agggaaacagcccagaccaccagctaaggtcctcaaatcagaacttagtgataaaggagg 1659539 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1659540 tgggagtgcatagacaaccaggaggtttgcctagaagcagccatccttaaaagagtgcgt 1659599 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 169 |||||||||||| || ||||| | ||||| ||| ||||||||||||||| Sbjct: 1659600 aatagctcactggtcaagcgctcctgcgccgaaaatgaacggggctaag 1659648 Score = 168 bits (85), Expect = 5e-39 Identities = 148/169 (87%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| || |||| | || |||||||||||||| Sbjct: 1049264 agggaaacagcccagaccaccagctaaggtcctcaaatcagaacttagtgataaaggagg 1049205 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1049204 tgggagtgcatagacaaccaggaggtttgcctagaagcagccatccttaaaagagtgcgt 1049145 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 169 |||||||||||| || ||||| | ||||| ||| ||||||||||||||| Sbjct: 1049144 aatagctcactggtcaagcgctcctgcgccgaaaatgaacggggctaag 1049096
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 168 bits (85), Expect = 5e-39 Identities = 148/169 (87%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| || |||| | || |||||||||||||| Sbjct: 1242 agggaaacagcccagaccaccagctaaggtcctcaaatcagaacttagtgataaaggagg 1301 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1302 tgggagtgcatagacaaccaggaggtttgcctagaagcagccatccttaaaagagtgcgt 1361 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 169 |||||||||||| || ||||| | ||||| ||| ||||||||||||||| Sbjct: 1362 aatagctcactggtcaagcgctcctgcgccgaaaatgaacggggctaag 1410
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 168 bits (85), Expect = 5e-39 Identities = 160/185 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || | |||||||||| |||||||| | |||| |||||||||||||| Sbjct: 3196 agggaaacagcccagaccgccagctaaggtccctaaataagcgctaagtgataaaggagg 3255 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||| ||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 3256 tgggattgcccagacaaccaggaggtttgcctagaagcagccatcctcaaaggagtgcgt 3315 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| ||||||| | ||||| ||| ||||||||||||||||| | | |||| Sbjct: 3316 aatagctcactggtcgagcgatcctgcgccgaaaatgaacggggctaagcgttttaccga 3375 Query: 181 agctg 185 ||||| Sbjct: 3376 agctg 3380
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 168 bits (85), Expect = 5e-39 Identities = 148/169 (87%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| || |||| | || |||||||||||||| Sbjct: 2657306 agggaaacagcccagaccaccagctaaggtcctcaaatcagaacttagtgataaaggagg 2657247 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 2657246 tgggagtgcatagacaaccaggaggtttgcctagaagcagccatccttaaaagagtgcgt 2657187 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 169 |||||||||||| || ||||| | ||||| ||| ||||||||||||||| Sbjct: 2657186 aatagctcactggtcaagcgctcctgcgccgaaaatgaacggggctaag 2657138 Score = 168 bits (85), Expect = 5e-39 Identities = 148/169 (87%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| || |||| | || |||||||||||||| Sbjct: 571615 agggaaacagcccagaccaccagctaaggtcctcaaatcagaacttagtgataaaggagg 571674 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| ||||| |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 571675 tgggagtgcatagacaaccaggaggtttgcctagaagcagccatccttaaaagagtgcgt 571734 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 169 |||||||||||| || ||||| | ||||| ||| ||||||||||||||| Sbjct: 571735 aatagctcactggtcaagcgctcctgcgccgaaaatgaacggggctaag 571783
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 167 bits (84), Expect = 2e-38 Identities = 162/188 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||||| || ||||| |||||||| Sbjct: 2517 agggaaacagcccagaccaccagctaaggtccccaaatgataactaagtgagaaaggagg 2576 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| |||| |||||||||||||||||| ||||| | |||| ||||||||||| Sbjct: 2577 tgggagtgcattgacaaccaggaggtttgcctagaggcagcaatccttaaaagagtgcgt 2636 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| | ||||| ||| ||||||||||||||| |||| |||| Sbjct: 2637 aatagctcactggtcaagcgctcctgcgccgaaaatgaacggggctaagttatctaccga 2696 Query: 181 agctgtgg 188 |||||||| Sbjct: 2697 agctgtgg 2704
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 167 bits (84), Expect = 2e-38 Identities = 163/188 (86%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| ||||| ||| |||||||||||||| Sbjct: 603 agggaaacagcccagaccaccagctaaggtcccaaaatggatgctaagtgataaaggagg 662 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||| |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 663 tgggattgcagagacaaccaggaggtttgcctagaagcagccatccttaaaagagtgcgt 722 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || |||| | | ||| ||| |||||||||||||||| ||| |||| Sbjct: 723 aatagctcactggtcaagcgatcct-cgccgaaaatgaacggggctaagcattctaccga 781 Query: 181 agctgtgg 188 |||||||| Sbjct: 782 agctgtgg 789
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 167 bits (84), Expect = 2e-38 Identities = 162/188 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| || ||||| |||||||||| || | ||||||||| | ||||||| Sbjct: 2313283 aggggaacagcccagaccaccaactaaggcccccaagacatcgctcagtggttaaggagg 2313342 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 ||||||||| |||||| |||||||||| || ||||||||||||||||||||| ||||||| Sbjct: 2313343 tgggggtgcgaagacaaccaggaggttggcttagaagcagccaccctttaaacagtgcgt 2313402 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 || |||| |||| || ||||||||||||| ||| ||||||||| ||||||||| ||||| Sbjct: 2313403 aacagctgactggtcaagcgcccttgcgccgaaaatgaacgggactaagcgatgcgccga 2313462 Query: 181 agctgtgg 188 || ||||| Sbjct: 2313463 agttgtgg 2313470 Score = 167 bits (84), Expect = 2e-38 Identities = 162/188 (86%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 |||| |||||||| || ||||| |||||||||| || | ||||||||| | ||||||| Sbjct: 1108564 aggggaacagcccagaccaccaactaaggcccccaagacatcgctcagtggttaaggagg 1108505 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 ||||||||| |||||| |||||||||| || ||||||||||||||||||||| ||||||| Sbjct: 1108504 tgggggtgcgaagacaaccaggaggttggcttagaagcagccaccctttaaacagtgcgt 1108445 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 || |||| |||| || ||||||||||||| ||| ||||||||| ||||||||| ||||| Sbjct: 1108444 aacagctgactggtcaagcgcccttgcgccgaaaatgaacgggactaagcgatgcgccga 1108385 Query: 181 agctgtgg 188 || ||||| Sbjct: 1108384 agttgtgg 1108377
>gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 165 bits (83), Expect = 7e-38 Identities = 165/191 (86%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || | |||||||||| ||| |||| | ||| |||||||||||||| Sbjct: 601 agggaaacagcccagaccgccagctaaggtccccaaataattgctaagtgataaaggagg 660 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| ||||| |||||||||||||||||||||||| | |||| ||||||||||| Sbjct: 661 tgggagtgcatagacaaccaggaggtttgcctagaagcagcaatccttgaaagagtgcgt 720 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| | | ||| ||| |||||||||||||||| || | |||| Sbjct: 721 aatagctcactggtcaagcgctcct-cgccgaaaatgaacggggctaagcaatttaccga 779 Query: 181 agctgtgggat 191 ||||| ||||| Sbjct: 780 agctgcgggat 790
>gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 165 bits (83), Expect = 7e-38 Identities = 165/191 (86%), Gaps = 1/191 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || | |||||||||| ||| |||| | ||| |||||||||||||| Sbjct: 601 agggaaacagcccagaccgccagctaaggtccccaaataattgctaagtgataaaggagg 660 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| ||||| |||||||||||||||||||||||| | |||| ||||||||||| Sbjct: 661 tgggagtgcatagacaaccaggaggtttgcctagaagcagcaatccttgaaagagtgcgt 720 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| | | ||| ||| |||||||||||||||| || | |||| Sbjct: 721 aatagctcactggtcaagcgctcct-cgccgaaaatgaacggggctaagcaatttaccga 779 Query: 181 agctgtgggat 191 ||||| ||||| Sbjct: 780 agctgcgggat 790
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 165 bits (83), Expect = 7e-38 Identities = 164/191 (85%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||| ||||||||||||||||||| | ||| |||| |||||| | Sbjct: 137478 agggaaacagcccagatcatcagctaaggcccctaaatggcagctaagtggcaaaggatg 137537 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | |||| ||||| |||| |||||||| |||||||||||| |||| ||||||||||| Sbjct: 137538 tgagaatgcagagacaaccagaaggtttgcttagaagcagccatccttaaaagagtgcgt 137597 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| | ||||| ||||||| ||| ||||||||| |||||| ||||||| Sbjct: 137598 aatagctcactggtagagcgttcttgcgccgaaaatgaacgggactaagctgcctgccga 137657 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 137658 agctgtgggat 137668 Score = 165 bits (83), Expect = 7e-38 Identities = 164/191 (85%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||| ||||||||||||||||||| | ||| |||| |||||| | Sbjct: 48066 agggaaacagcccagatcatcagctaaggcccctaaatggcagctaagtggcaaaggatg 48007 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | |||| ||||| |||| |||||||| |||||||||||| |||| ||||||||||| Sbjct: 48006 tgagaatgcagagacaaccagaaggtttgcttagaagcagccatccttaaaagagtgcgt 47947 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| | ||||| ||||||| ||| ||||||||| |||||| ||||||| Sbjct: 47946 aatagctcactggtagagcgttcttgcgccgaaaatgaacgggactaagctgcctgccga 47887 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 47886 agctgtgggat 47876
>gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5001 Score = 165 bits (83), Expect = 7e-38 Identities = 161/187 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| |||||||||||||||||||||||| | || |||| |||||||| Sbjct: 992 agggaaacagcccagatcaccagctaaggcccctaaataagtactaagtggcaaaggagg 1051 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| |||||||||| ||||||||||||||||||||| |||| || |||||||| Sbjct: 1052 tgggagtgctaagacagccaaaaggtttgcctagaagcagccatccttgaacgagtgcgt 1111 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 || |||||| || |||||||| ||||||| ||| ||||||||| ||||| | |||||| Sbjct: 1112 aacagctcattggtcgagcgctcttgcgccgaaaatgaacgggactaagtactttgccga 1171 Query: 181 agctgtg 187 ||||||| Sbjct: 1172 agctgtg 1178
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 163 bits (82), Expect = 3e-37 Identities = 124/138 (89%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||| |||||||||||||| | ||| |||||||||||||| Sbjct: 2726 agggaaacagcccagagcaccagttaaggcccctaaataattgctaagtgataaaggagg 2785 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| ||||| |||||||||||| |||||||||| | |||||||||||||||| Sbjct: 2786 tgggagtgcatagacaatcaggaggtttgcttagaagcagcaatcctttaaagagtgcgt 2845 Query: 121 aatagctcactgatcgag 138 |||||||||||||||||| Sbjct: 2846 aatagctcactgatcgag 2863
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 161 bits (81), Expect = 1e-36 Identities = 159/185 (85%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || | |||||||||| ||| |||| | |||| |||||||||||||| Sbjct: 320578 agggaaacagcccagaccgccagctaaggtcccaaaattaacgctaagtgataaaggagg 320637 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||| ||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 320638 tgggattgcccagacaaccaggaggtttgcctagaagcagccatcctcaaaggagtgcgt 320697 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| ||||||| | ||||| ||| ||||||||||||||||| | | |||| Sbjct: 320698 aatagctcactggtcgagcgatcctgcgccgaaaatgaacggggctaagcgttataccga 320757 Query: 181 agctg 185 ||||| Sbjct: 320758 agctg 320762
>gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, complete genome Length = 149705 Score = 161 bits (81), Expect = 1e-36 Identities = 162/189 (85%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||| |||||||||||||||| ||| |||| |||||||| Sbjct: 45065 agggaaacagcccagatcaccagataaggcccctaaatgatggctaagtggcaaaggagg 45006 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | || ||||| |||||||||| || |||||||||||| ||||| |||||||||| Sbjct: 45005 tgaacgcgcttagacaaccaggaggttggcttagaagcagccatcctttcaagagtgcgt 44946 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || |||| |||||| ||| ||||||||| |||||| ||||||||| Sbjct: 44945 aatagctcactggtccagcgtgtttgcgccgaaaatgaacgggactaagccatctgccga 44886 Query: 181 agctgtggg 189 ||||||||| Sbjct: 44885 agctgtggg 44877
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 161 bits (81), Expect = 1e-36 Identities = 148/169 (87%), Gaps = 1/169 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| || ||||||||||||||||| Sbjct: 603 agggaaacagcccagaccaccagctaaggtcccaaaataacacctcagtgataaaggagg 662 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||| |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 663 tgggaatgcagagacaaccaggaggtttgcctagaagcagccatccttaaaagagtgcgt 722 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 169 |||||||||||| || |||| | | ||| ||| ||||||||||||||| Sbjct: 723 aatagctcactggtcaagcgttcct-cgccgaaaatgaacggggctaag 770
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 161 bits (81), Expect = 1e-36 Identities = 159/185 (85%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || | |||||||||| ||| |||| | |||| |||||||||||||| Sbjct: 19879 agggaaacagcccagaccgccagctaaggtcccaaaattaacgctaagtgataaaggagg 19820 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||| ||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 19819 tgggattgcccagacaaccaggaggtttgcctagaagcagccatcctcaaaggagtgcgt 19760 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| ||||||| | ||||| ||| ||||||||||||||||| | | |||| Sbjct: 19759 aatagctcactggtcgagcgatcctgcgccgaaaatgaacggggctaagcgttataccga 19700 Query: 181 agctg 185 ||||| Sbjct: 19699 agctg 19695
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 161 bits (81), Expect = 1e-36 Identities = 159/185 (85%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || | |||||||||| ||| |||| | |||| |||||||||||||| Sbjct: 1633 agggaaacagcccagaccgccagctaaggtcccaaaattaacgctaagtgataaaggagg 1574 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||| ||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 1573 tgggattgcccagacaaccaggaggtttgcctagaagcagccatcctcaaaggagtgcgt 1514 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| ||||||| | ||||| ||| ||||||||||||||||| | | |||| Sbjct: 1513 aatagctcactggtcgagcgatcctgcgccgaaaatgaacggggctaagcgttataccga 1454 Query: 181 agctg 185 ||||| Sbjct: 1453 agctg 1449
>dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D Length = 149987 Score = 161 bits (81), Expect = 1e-36 Identities = 162/189 (85%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||| |||||||||||||||| ||| |||| |||||||| Sbjct: 20314 agggaaacagcccagatcaccagataaggcccctaaatgatggctaagtggcaaaggagg 20373 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | || ||||| |||||||||| || |||||||||||| ||||| |||||||||| Sbjct: 20374 tgaacgcgcttagacaaccaggaggttggcttagaagcagccatcctttcaagagtgcgt 20433 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || |||| |||||| ||| ||||||||| |||||| ||||||||| Sbjct: 20434 aatagctcactggtccagcgtgtttgcgccgaaaatgaacgggactaagccatctgccga 20493 Query: 181 agctgtggg 189 ||||||||| Sbjct: 20494 agctgtggg 20502
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 161 bits (81), Expect = 1e-36 Identities = 165/193 (85%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || ||||| ||||||||||||||| | ||| |||| |||||||| Sbjct: 2802 agggaaacagcccagaccaccatctaaggcccctaaataatagctaagtgggaaaggagg 2861 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 ||| |||| ||||| ||||||||||||| |||||||||| | |||||||||||||||| Sbjct: 2862 tggaagtgcttagacaaccaggaggtttgcttagaagcagcaatcctttaaagagtgcgt 2921 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| ||||| ||| ||||| ||| |||||| || |||||| Sbjct: 2922 aatagctcactggtcaagcgcttctgcgccgaaaatgaatgggactaagctatttgccga 2981 Query: 181 agctgtgggatgt 193 ||||||||||||| Sbjct: 2982 agctgtgggatgt 2994
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 161 bits (81), Expect = 1e-36 Identities = 96/101 (95%) Strand = Plus / Plus Query: 118 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 177 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 755 cgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgc 814 Query: 178 cgaagctgtgggatgtcaaaatgcataggtaggggagcgtt 218 |||||||| ||||||| ||||||||| |||||||||||||| Sbjct: 815 cgaagctgcgggatgtaaaaatgcatcggtaggggagcgtt 855
>gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 159 bits (80), Expect = 4e-36 Identities = 162/188 (86%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| ||||| ||| |||||||||||||| Sbjct: 603 agggaaacagcccagaccaccagctaaggtccccaaatggatgctaagtgataaaggagg 662 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||| |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 663 tgggattgcagagacaaccaggaggtttgcctagaagcagccatccttaaaagagtgcgt 722 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || |||| | | ||| ||| |||||||||||||||| || |||| Sbjct: 723 aatagctcactggtcaagcgatcct-cgccgaaaatgaacggggctaagcatcctaccga 781 Query: 181 agctgtgg 188 |||||||| Sbjct: 782 agctgtgg 789
>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 159 bits (80), Expect = 4e-36 Identities = 162/188 (86%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | | || ||||| |||||||| Sbjct: 604 agggaaacagcccagaccaccagctaaggtccccaaatcatcactaagtgagaaaggagg 663 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||||| |||| |||||||||||||||||||||||| | |||| ||||||||||| Sbjct: 664 tgggagtgcattgacaaccaggaggtttgcctagaagcagcaatccttaaaagagtgcgt 723 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || ||||| | | ||| ||| ||||||||||||||| ||| | |||| Sbjct: 724 aatagctcactggtcaagcgctcct-cgccgaaaatgaacggggctaagtgatgtaccga 782 Query: 181 agctgtgg 188 |||||||| Sbjct: 783 agctgtgg 790
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 159 bits (80), Expect = 4e-36 Identities = 158/184 (85%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || || ||||||||||||||||||| ||||| |||| |||||||| Sbjct: 993 agggaaacagcccagaccatcagctaaggcccctaaatggccgctaagtggcaaaggagg 1052 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1053 tgagaatgctgaaacaaccaggaggtttgcttagaagcagccaccctttaaagagtgcgt 1112 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| | |||| ||||||| ||| |||| |||| ||||||| ||||||| Sbjct: 1113 aatagctcactggtaaagcgttcttgcgccgaaaatgatcgggactaagcggcctgccga 1172 Query: 181 agct 184 |||| Sbjct: 1173 agct 1176
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 159 bits (80), Expect = 4e-36 Identities = 158/184 (85%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || || ||||||||||||||||||| ||||| |||| |||||||| Sbjct: 2875 agggaaacagcccagaccatcagctaaggcccctaaatggccgctaagtggcaaaggagg 2934 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2935 tgagaatgctgaaacaaccaggaggtttgcttagaagcagccaccctttaaagagtgcgt 2994 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| | |||| ||||||| ||| |||| |||| ||||||| ||||||| Sbjct: 2995 aatagctcactggtaaagcgttcttgcgccgaaaatgatcgggactaagcggcctgccga 3054 Query: 181 agct 184 |||| Sbjct: 3055 agct 3058
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 159 bits (80), Expect = 4e-36 Identities = 161/188 (85%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||| |||| | | || |||| |||||||| Sbjct: 2333834 agggaaacagcccagaccaccagctaaggtccccaaatcatcactaagtggcaaaggagg 2333775 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 ||||| ||| ||||| |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 2333774 tggggatgctcagacaaccaggaggtttgcctagaagcagccatccttaaaagagtgcgt 2333715 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || |||| | ||||| ||| ||||||||| ||||| ||| | |||| Sbjct: 2333714 aatagctcactggtcaagcgttcctgcgccgaaaatgaacgggactaagtgatgtaccga 2333655 Query: 181 agctgtgg 188 |||||||| Sbjct: 2333654 agctgtgg 2333647
>gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 3371 Score = 157 bits (79), Expect = 2e-35 Identities = 160/187 (85%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| ||||||||| ||||||||| ||| || ||| |||| |||||||| Sbjct: 994 agggaaacagcccagatcaccagttaaggccccaaaacgatagctaagtggaaaaggagg 1053 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||| |||||| |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 1054 tgggcatgcgaagacaaccaggaggtttgcctagaagcagccatccttgaaagagtgcgt 1113 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || |||| | ||||| ||| ||||| ||| ||||| ||||||||| Sbjct: 1114 aatagctcactggtcaagcgttcctgcgccgaaaatgaatgggactaagttatctgccga 1173 Query: 181 agctgtg 187 | ||||| Sbjct: 1174 aactgtg 1180
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 157 bits (79), Expect = 2e-35 Identities = 163/191 (85%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||| |||||||||||||| | ||| |||||||||||| | Sbjct: 39444 agggaaacagcccagaccaccagttaaggcccctaaataattgctaagtgataaaggatg 39385 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||| ||||| ||||||||| ||||||||||||| | |||||||||||||||| Sbjct: 39384 tgggaatgctgagacaatcaggaggttcgcctagaagcagctatcctttaaagagtgcgt 39325 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| | ||||| ||| |||| ||| ||||| || |||||| Sbjct: 39324 aatagctcactgatcaagcgcacctgcgccgaaaatgactgggactaagtaatttgccga 39265 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 39264 agctgtgggat 39254 Score = 157 bits (79), Expect = 2e-35 Identities = 163/191 (85%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||| |||||||||||||| | ||| |||||||||||| | Sbjct: 19956 agggaaacagcccagaccaccagttaaggcccctaaataattgctaagtgataaaggatg 20015 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||| ||||| ||||||||| ||||||||||||| | |||||||||||||||| Sbjct: 20016 tgggaatgctgagacaatcaggaggttcgcctagaagcagctatcctttaaagagtgcgt 20075 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 ||||||||||||||| ||||| | ||||| ||| |||| ||| ||||| || |||||| Sbjct: 20076 aatagctcactgatcaagcgcacctgcgccgaaaatgactgggactaagtaatttgccga 20135 Query: 181 agctgtgggat 191 ||||||||||| Sbjct: 20136 agctgtgggat 20146
>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3875 Score = 155 bits (78), Expect = 7e-35 Identities = 162/190 (85%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || || ||||||||||||| ||||| ||||| |||| |||||||| Sbjct: 1006 agggaaacagcccagaccatcagctaaggccccaaaatggccgctaagtggcaaaggagg 1065 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 || | ||| | ||| ||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 1066 tgagaatgctgaaacaaccaggaggtttgcttagaagcagccatcctttaaagagtgcgt 1125 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| | |||| ||||||| ||| |||| |||| ||||||| ||||||| Sbjct: 1126 aatagctcactggtaaagcgttcttgcgccgaaaatgatcgggactaagcggcctgccga 1185 Query: 181 agctgtggga 190 |||||||||| Sbjct: 1186 agctgtggga 1195
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 155 bits (78), Expect = 7e-35 Identities = 147/170 (86%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || ||||| |||||| ||| |||| |||||||||| ||||||| Sbjct: 1569784 agggaaacagcccagaccaccaactaaggtccccaaattgtagctcagtgattaaggagg 1569725 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||| |||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1569724 tgggattgcacagacaaccaggaggttggcctagaagcagccacccttgaaagagtgcgt 1569665 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 170 |||||||||||| || |||| | ||||| ||| |||||||||||||||| Sbjct: 1569664 aatagctcactggtcaagcgatcctgcgccgaaaatgaacggggctaagc 1569615
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 153 bits (77), Expect = 3e-34 Identities = 146/169 (86%) Strand = Plus / Minus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || | |||||||||| ||| |||| | | || |||||||||||||| Sbjct: 2137805 agggaaacagcccagaccgccagctaaggtccccaaatcaacactaagtgataaaggagg 2137746 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 2137745 tgggattgcatagacaaccaggaggtttgcctagaagcagccatcctcaaaggagtgcgt 2137686 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 169 |||||||||||| ||||||| | ||||| ||| ||||||||||||||| Sbjct: 2137685 aatagctcactggtcgagcgatcctgcgccgaaaatgaacggggctaag 2137637 Score = 153 bits (77), Expect = 3e-34 Identities = 146/169 (86%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || | |||||||||| ||| |||| | | || |||||||||||||| Sbjct: 477055 agggaaacagcccagaccgccagctaaggtccccaaatcaacactaagtgataaaggagg 477114 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 477115 tgggattgcatagacaaccaggaggtttgcctagaagcagccatcctcaaaggagtgcgt 477174 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 169 |||||||||||| ||||||| | ||||| ||| ||||||||||||||| Sbjct: 477175 aatagctcactggtcgagcgatcctgcgccgaaaatgaacggggctaag 477223
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 153 bits (77), Expect = 3e-34 Identities = 158/185 (85%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || | |||||||||| ||| |||| | |||| |||||||||||||| Sbjct: 3001 agggaaacagcccagaccgccagctaaggtcccaaaattaacgctaagtgataaaggagg 3060 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||| ||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 3061 tgggattgcccagacaaccaggaggtttgcctagaagcagccatcctcaaaggagtgcgt 3120 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| ||||||| | ||||| ||| ||||| ||||||||||| | | |||| Sbjct: 3121 aatagctcactggtcgagcgatcctgcgccgaaaatgaatggggctaagcgttataccga 3180 Query: 181 agctg 185 ||||| Sbjct: 3181 agctg 3185
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 153 bits (77), Expect = 3e-34 Identities = 158/185 (85%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || | |||||||||| ||| |||| | |||| |||||||||||||| Sbjct: 3002 agggaaacagcccagaccgccagctaaggtcccaaaattaacgctaagtgataaaggagg 3061 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||| ||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 3062 tgggattgcccagacaaccaggaggtttgcctagaagcagccatcctcaaaggagtgcgt 3121 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| ||||||| | ||||| ||| ||||| ||||||||||| | | |||| Sbjct: 3122 aatagctcactggtcgagcgatcctgcgccgaaaatgaatggggctaagcgttataccga 3181 Query: 181 agctg 185 ||||| Sbjct: 3182 agctg 3186
>gb|AY033297.1| Uncultured Synechococcus sp. MB11A04 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4141 Score = 153 bits (77), Expect = 3e-34 Identities = 158/185 (85%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || | |||||||||| ||| |||| | |||| |||||||||||||| Sbjct: 3226 agggaaacagcccagaccgccagctaaggtcccaaaattaacgctaagtgataaaggagg 3285 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||| ||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 3286 tgggattgcccagacaaccaggaggtttgcctagaagcagccatcctcaaaggagtgcgt 3345 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| ||||||| | ||||| ||| ||||| ||||||||||| | | |||| Sbjct: 3346 aatagctcactggtcgagcgatcctgcgccgaaaatgaatggggctaagcgttataccga 3405 Query: 181 agctg 185 ||||| Sbjct: 3406 agctg 3410
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 153 bits (77), Expect = 3e-34 Identities = 158/185 (85%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || | |||||||||| ||| |||| | |||| |||||||||||||| Sbjct: 316067 agggaaacagcccagaccgccagctaaggtcccaaaattaacgctaagtgataaaggagg 316126 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| ||| ||||| |||||||||||||||||||||||||| ||| || |||||||| Sbjct: 316127 tgggattgcccagacaaccaggaggtttgcctagaagcagccatcctcaaaggagtgcgt 316186 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| ||||||| | ||||| ||| ||||| ||||||||||| | | |||| Sbjct: 316187 aatagctcactggtcgagcgatcctgcgccgaaaatgaatggggctaagcgttataccga 316246 Query: 181 agctg 185 ||||| Sbjct: 316247 agctg 316251
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 153 bits (77), Expect = 3e-34 Identities = 164/193 (84%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||||||| |||| | || |||| |||||||| Sbjct: 188985 agggaaacagcccagaccaccagctaaggccccaaaataattactaagtggcaaaggagg 189044 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||| ||||||||||||| |||||||||| | |||||||||||||||| Sbjct: 189045 tgggaatgcatagacaaccaggaggtttgcttagaagcagcaatcctttaaagagtgcgt 189104 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || || | | ||||| ||| ||||||||| ||||| || |||||| Sbjct: 189105 aatagctcactggtcaagtgatcctgcgccgaaaatgaacgggactaagtaatttgccga 189164 Query: 181 agctgtgggatgt 193 ||||||||||||| Sbjct: 189165 agctgtgggatgt 189177 Score = 153 bits (77), Expect = 3e-34 Identities = 164/193 (84%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||||||| |||| | || |||| |||||||| Sbjct: 150542 agggaaacagcccagaccaccagctaaggccccaaaataattactaagtggcaaaggagg 150601 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||| ||||||||||||| |||||||||| | |||||||||||||||| Sbjct: 150602 tgggaatgcatagacaaccaggaggtttgcttagaagcagcaatcctttaaagagtgcgt 150661 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || || | | ||||| ||| ||||||||| ||||| || |||||| Sbjct: 150662 aatagctcactggtcaagtgatcctgcgccgaaaatgaacgggactaagtaatttgccga 150721 Query: 181 agctgtgggatgt 193 ||||||||||||| Sbjct: 150722 agctgtgggatgt 150734
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 151 bits (76), Expect = 1e-33 Identities = 161/188 (85%), Gaps = 1/188 (0%) Strand = Plus / Plus Query: 1 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 60 ||||||||||||| || |||||||||||| ||||||||| ||| |||| ||||||||| Sbjct: 603 agggaaacagcccagaccaccagctaaggtccctaaatggatgctaagtggtaaaggagg 662 Query: 61 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 120 |||| |||| ||||| |||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 663 tgggattgcagagacaaccaggaggtttgcctagaagcagccatccttaaaagagtgcgt 722 Query: 121 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 180 |||||||||||| || |||| | | ||| ||| ||||||||| |||||| || |||| Sbjct: 723 aatagctcactggtcaagcgatcct-cgccgaaaatgaacgggactaagcatcctaccga 781 Query: 181 agctgtgg 188 |||||||| Sbjct: 782 agctgtgg 789
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 151 bits (76), Expect = 1e-33 Identities = 187/220 (85%), Gaps = 3/220 (1%) Strand = Plus / Plus Query: 1 agggaaacagccc-ggatcaccagctaaggcccctaaatgaccgctcagtgataaaggag 59 ||||||||||||| ||| |||| |||||||||||| ||||| || ||||| ||||| Sbjct: 989 agggaaacagcccaggaccaccggctaaggcccctcaatgattcctaagtgacgaaggat 1048 Query: 60 gtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcg 119 ||| | ||||| ||||| |||| |||||||||||||||||||||||||| |||||||||| Sbjct: 1049 gtgagagtgcagagacaaccagaaggtttgcctagaagcagccacccttgaaagagtgcg 1108 Query: 120 taatagctcactgatcgagcgcccttgcgctgaagatgaacggggct-aagcgatctgcc 178 |||||||||||||||| ||||| || |||| ||| ||||| ||| || ||| ||||||| Sbjct: 1109 taatagctcactgatcaagcgctctggcgccgaaaatgaaagggactcaaggaatctgcc 1168 Query: 179 gaagctgtgggatgtcaaaatgcataggtaggggagcgtt 218 ||||| |||| |||| ||| | ||| |||||||||||||| Sbjct: 1169 gaagccgtggcatgt-aaattacatgggtaggggagcgtt 1207 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,549,147 Number of Sequences: 3902068 Number of extensions: 1549147 Number of successful extensions: 102567 Number of sequences better than 10.0: 2311 Number of HSP's better than 10.0 without gapping: 2337 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 90820 Number of HSP's gapped (non-prelim): 11170 length of query: 218 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 196 effective length of database: 17,147,199,772 effective search space: 3360851155312 effective search space used: 3360851155312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)