ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd21g16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 492 e-136
2dbj|AK119540.1| Oryza sativa (japonica cultivar-group) cDNA clon... 492 e-136
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 492 e-136
4emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa... 492 e-136
5dbj|AK067367.1| Oryza sativa (japonica cultivar-group) cDNA clon... 476 e-131
6dbj|AK062059.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 4e-48
7gb|AY109575.1| Zea mays CL1708_1 mRNA sequence 151 3e-33
8gb|AY107637.1| Zea mays PCO086097 mRNA sequence 101 3e-18
9ref|NM_001036666.1| Arabidopsis thaliana EMB2726; RNA binding / ... 56 2e-04
10ref|NM_119050.2| Arabidopsis thaliana EMB2726; RNA binding / str... 56 2e-04
11gb|AY661462.1| Arabidopsis thaliana chloroplast polyprotein of e... 56 2e-04
12emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, ... 56 2e-04
13emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, B... 56 2e-04
14emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, B... 56 2e-04
15gb|AY056792.1| Arabidopsis thaliana AT4g29060/F19B15_90 mRNA, co... 56 2e-04
16emb|BX828821.1|CNS0A2AV Arabidopsis thaliana Full-length cDNA Co... 56 2e-04
17emb|BX842656.1| Bdellovibrio bacteriovorus complete genome, stra... 54 6e-04
18dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, comple... 48 0.037
19dbj|BS000097.1| Pan troglodytes chromosome 22 clone:RP43-016D07,... 46 0.15
20gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complet... 44 0.58
21emb|CR727630.2|CNS0GODW Tetraodon nigroviridis full-length cDNA 44 0.58
22emb|CR664157.2|CNS0FBFN Tetraodon nigroviridis full-length cDNA 44 0.58
23emb|CR662603.2|CNS0FA8H Tetraodon nigroviridis full-length cDNA 44 0.58
24emb|CR645115.2|CNS0EWQP Tetraodon nigroviridis full-length cDNA 44 0.58
25emb|BX927154.1| Corynebacterium glutamicum ATCC 13032, IS finger... 44 0.58
26gb|AC144473.8| Medicago truncatula clone mth2-15l5, complete seq... 44 0.58
27dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 44 0.58
28gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete... 42 2.3
29gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 42 2.3
30emb|BX276104.14| Mouse DNA sequence from clone RP24-313E3 on chr... 42 2.3
31gb|AF512506.1| Morone saxatilis class IIIB myosin short isoform ... 42 2.3
32dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 42 2.3
33gb|AC174772.1| Gasterosteus aculeatus clone VMRC28-84K14, comple... 42 2.3
34gb|AC146967.3| Bos taurus clone RP42-279M12, complete sequence 40 9.1
35gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome... 40 9.1
36gb|AF025679.2| Schistosoma mansoni clone pSmPf5 SR2 subfamily B ... 40 9.1
37gb|AC104514.2| Drosophila melanogaster clone BACR22L21, complete... 40 9.1
38gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence 40 9.1
39gb|AY603485.1| Exostoma labiatum ribosomal protein S7 (rpS7) gen... 40 9.1
40gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 9.1
41gb|DP000008.1| Bos taurus target 1 genomic scaffold 40 9.1
42gb|AC115361.5| Mus musculus BAC clone RP24-76P12 from chromosome... 40 9.1
43gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 9.1
44emb|AL022337.19|HS796E4 Human DNA sequence from clone CTA-796E4 ... 40 9.1
45emb|X83598.1|TTRTP T.thermophilus rpsB, tsf and pyrH genes 40 9.1
46emb|BX897699.1| Bartonella henselae strain Houston-1, complete g... 40 9.1
47emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on ch... 40 9.1
48gb|AC112165.2| Homo sapiens chromosome 5 clone CTB-128F12, compl... 40 9.1
49gb|AC113370.2| Homo sapiens chromosome 5 clone RP11-124O5, compl... 40 9.1
50gb|AC093294.3| Homo sapiens chromosome 5 clone RP11-524C16, comp... 40 9.1
51gb|AC091500.1|AC091500 Drosophila melanogaster, chromosome 2R, r... 40 9.1
52dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
53dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
54dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 9.1
55dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 9.1
56emb|BX005447.8| Zebrafish DNA sequence from clone DKEY-29B14, co... 40 9.1
57emb|BX088551.7| Zebrafish DNA sequence from clone CH211-106A19 i... 40 9.1
58gb|AC153868.3| Mus musculus BAC RP23-384D16 (Roswell Park Cancer... 40 9.1
59gb|AC153578.4| Mus musculus 6 BAC RP23-218P2 (Roswell Park Cance... 40 9.1
60gb|AF025673.1|AF025673 Schistosoma mansoni SR2 subfamily A non-L... 40 9.1
61gb|U50042.1|DDU50042 Dictyostelium discoideum repE homolog of UV... 40 9.1
62gb|AE003801.4| Drosophila melanogaster chromosome 2R, section 49... 40 9.1
63emb|CR942373.2| Xenopus tropicalis finished cDNA, clone TGas090b21 40 9.1
64gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 9.1
65gb|AC004640.1|AC004640 Drosophila melanogaster DNA sequence (P1s... 40 9.1
66gb|AC122284.5| Mus musculus BAC clone RP23-246A5 from 6, complet... 40 9.1
67gb|AC142414.3| Mus musculus BAC clone RP23-372N15 from 8, comple... 40 9.1
68emb|AL806516.4| Mouse DNA sequence from clone RP23-453N20 on chr... 40 9.1
69gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome... 40 9.1
70dbj|AB238686.1| Thiobacillus thioparus scnC, orf1, orf2, orf3, o... 40 9.1 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  492 bits (248), Expect = e-136
 Identities = 380/424 (89%)
 Strand = Plus / Plus

                                                                            
Query: 14       acaagaagtcgtctcgcctaaccgctgaaggcctgattggatcgtacatccacgacaacc 73
                |||||||||| |||||||||||||| |||||||| |||||  | |||||||| ||||| |
Sbjct: 21699324 acaagaagtcctctcgcctaaccgccgaaggcctaattggcgcctacatccatgacaatc 21699383

                                                                            
Query: 74       gcataggatgcatgattgaaatcaactctgagaccgacttcgtggctcgcaatgagaaat 133
                | || || ||||||||||| ||||| || ||||||||||||||||||||||| ||||| |
Sbjct: 21699384 ggattggttgcatgattgagatcaattccgagaccgacttcgtggctcgcaacgagaagt 21699443

                                                                            
Query: 134      tcaaggagctggtgaatgacctcgcaatgcaagtggtggcatgcccgcaggtcgaatatg 193
                |||||||||||||||| |||||||| ||||| ||||||||||| || ||||| || ||||
Sbjct: 21699444 tcaaggagctggtgaacgacctcgcgatgcaggtggtggcatgtccacaggttgagtatg 21699503

                                                                            
Query: 194      tctcaatggacgacataccagagagtattgtcagcaaggagaaggagattgagatgcaga 253
                |||| || || ||||| ||||||||| |||||| ||||||||| ||||||||||||||||
Sbjct: 21699504 tctccatagaggacatcccagagagtgttgtcatcaaggagaaagagattgagatgcaga 21699563

                                                                            
Query: 254      gggaggacctgcagtcaaaacccgagaacatcagggagaagatcgtggaagggcggatat 313
                | |||||||| ||||| ||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct: 21699564 gagaggaccttcagtccaaacctgagaacatcagggagaagatcgtcgaaggccggatat 21699623

                                                                            
Query: 314      cgaagaggctcggcgtgatggccctcctggagcagcccttcatcaaggatgacagcaaga 373
                ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 21699624 cgaagaggctcggcgtgctggccctcctggagcagcctttcatcaaggatgacagcaaga 21699683

                                                                            
Query: 374      cggtgaaggatctcgtgaaggagacgatcgctggtctgggggagaacatcaaggtacgga 433
                ||||||||||||| |||||||||||||||||    || ||||||||||||||||||||||
Sbjct: 21699684 cggtgaaggatcttgtgaaggagacgatcgccacccttggggagaacatcaaggtacgga 21699743

                    
Query: 434      ggtt 437
                ||||
Sbjct: 21699744 ggtt 21699747



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                  
Query: 495      cctgacatcaggagttgggcacattttgattcat 528
                ||||||||||||||||||||| ||||||||||||
Sbjct: 21699802 cctgacatcaggagttgggcatattttgattcat 21699835



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 647      tgtagatgacaagagagatcaa 668
                ||||||||||||||||||||||
Sbjct: 21699969 tgtagatgacaagagagatcaa 21699990



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 340      ctggagcagcccttcatcaaggatgaca 367
                |||||||| |||||||||||| ||||||
Sbjct: 21698789 ctggagcaacccttcatcaagaatgaca 21698816



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 244      gagatgcagagggaggacct 263
                ||||||||||||||||||||
Sbjct: 21698693 gagatgcagagggaggacct 21698712
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>dbj|AK119540.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C06, full
            insert sequence
          Length = 1368

 Score =  492 bits (248), Expect = e-136
 Identities = 380/424 (89%)
 Strand = Plus / Plus

                                                                        
Query: 14   acaagaagtcgtctcgcctaaccgctgaaggcctgattggatcgtacatccacgacaacc 73
            |||||||||| |||||||||||||| |||||||| |||||  | |||||||| ||||| |
Sbjct: 678  acaagaagtcctctcgcctaaccgccgaaggcctaattggcgcctacatccatgacaatc 737

                                                                        
Query: 74   gcataggatgcatgattgaaatcaactctgagaccgacttcgtggctcgcaatgagaaat 133
            | || || ||||||||||| ||||| || ||||||||||||||||||||||| ||||| |
Sbjct: 738  ggattggttgcatgattgagatcaattccgagaccgacttcgtggctcgcaacgagaagt 797

                                                                        
Query: 134  tcaaggagctggtgaatgacctcgcaatgcaagtggtggcatgcccgcaggtcgaatatg 193
            |||||||||||||||| |||||||| ||||| ||||||||||| || ||||| || ||||
Sbjct: 798  tcaaggagctggtgaacgacctcgcgatgcaggtggtggcatgtccacaggttgagtatg 857

                                                                        
Query: 194  tctcaatggacgacataccagagagtattgtcagcaaggagaaggagattgagatgcaga 253
            |||| || || ||||| ||||||||| |||||| ||||||||| ||||||||||||||||
Sbjct: 858  tctccatagaggacatcccagagagtgttgtcatcaaggagaaagagattgagatgcaga 917

                                                                        
Query: 254  gggaggacctgcagtcaaaacccgagaacatcagggagaagatcgtggaagggcggatat 313
            | |||||||| ||||| ||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct: 918  gagaggaccttcagtccaaacctgagaacatcagggagaagatcgtcgaaggccggatat 977

                                                                        
Query: 314  cgaagaggctcggcgtgatggccctcctggagcagcccttcatcaaggatgacagcaaga 373
            ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 978  cgaagaggctcggcgtgctggccctcctggagcagcctttcatcaaggatgacagcaaga 1037

                                                                        
Query: 374  cggtgaaggatctcgtgaaggagacgatcgctggtctgggggagaacatcaaggtacgga 433
            ||||||||||||| |||||||||||||||||    || ||||||||||||||||||||||
Sbjct: 1038 cggtgaaggatcttgtgaaggagacgatcgccacccttggggagaacatcaaggtacgga 1097

                
Query: 434  ggtt 437
            ||||
Sbjct: 1098 ggtt 1101



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                              
Query: 495  cctgacatcaggagttgggcacattttgattcat 528
            ||||||||||||||||||||| ||||||||||||
Sbjct: 1156 cctgacatcaggagttgggcatattttgattcat 1189



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 647  tgtagatgacaagagagatcaa 668
            ||||||||||||||||||||||
Sbjct: 1323 tgtagatgacaagagagatcaa 1344



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 340 ctggagcagcccttcatcaaggatgaca 367
           |||||||| |||||||||||| ||||||
Sbjct: 281 ctggagcaacccttcatcaagaatgaca 308



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 244 gagatgcagagggaggacct 263
           ||||||||||||||||||||
Sbjct: 185 gagatgcagagggaggacct 204
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  492 bits (248), Expect = e-136
 Identities = 380/424 (89%)
 Strand = Plus / Plus

                                                                            
Query: 14       acaagaagtcgtctcgcctaaccgctgaaggcctgattggatcgtacatccacgacaacc 73
                |||||||||| |||||||||||||| |||||||| |||||  | |||||||| ||||| |
Sbjct: 21627669 acaagaagtcctctcgcctaaccgccgaaggcctaattggcgcctacatccatgacaatc 21627728

                                                                            
Query: 74       gcataggatgcatgattgaaatcaactctgagaccgacttcgtggctcgcaatgagaaat 133
                | || || ||||||||||| ||||| || ||||||||||||||||||||||| ||||| |
Sbjct: 21627729 ggattggttgcatgattgagatcaattccgagaccgacttcgtggctcgcaacgagaagt 21627788

                                                                            
Query: 134      tcaaggagctggtgaatgacctcgcaatgcaagtggtggcatgcccgcaggtcgaatatg 193
                |||||||||||||||| |||||||| ||||| ||||||||||| || ||||| || ||||
Sbjct: 21627789 tcaaggagctggtgaacgacctcgcgatgcaggtggtggcatgtccacaggttgagtatg 21627848

                                                                            
Query: 194      tctcaatggacgacataccagagagtattgtcagcaaggagaaggagattgagatgcaga 253
                |||| || || ||||| ||||||||| |||||| ||||||||| ||||||||||||||||
Sbjct: 21627849 tctccatagaggacatcccagagagtgttgtcatcaaggagaaagagattgagatgcaga 21627908

                                                                            
Query: 254      gggaggacctgcagtcaaaacccgagaacatcagggagaagatcgtggaagggcggatat 313
                | |||||||| ||||| ||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct: 21627909 gagaggaccttcagtccaaacctgagaacatcagggagaagatcgtcgaaggccggatat 21627968

                                                                            
Query: 314      cgaagaggctcggcgtgatggccctcctggagcagcccttcatcaaggatgacagcaaga 373
                ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 21627969 cgaagaggctcggcgtgctggccctcctggagcagcctttcatcaaggatgacagcaaga 21628028

                                                                            
Query: 374      cggtgaaggatctcgtgaaggagacgatcgctggtctgggggagaacatcaaggtacgga 433
                ||||||||||||| |||||||||||||||||    || ||||||||||||||||||||||
Sbjct: 21628029 cggtgaaggatcttgtgaaggagacgatcgccacccttggggagaacatcaaggtacgga 21628088

                    
Query: 434      ggtt 437
                ||||
Sbjct: 21628089 ggtt 21628092



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                  
Query: 495      cctgacatcaggagttgggcacattttgattcat 528
                ||||||||||||||||||||| ||||||||||||
Sbjct: 21628147 cctgacatcaggagttgggcatattttgattcat 21628180



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 647      tgtagatgacaagagagatcaa 668
                ||||||||||||||||||||||
Sbjct: 21628314 tgtagatgacaagagagatcaa 21628335



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 340      ctggagcagcccttcatcaaggatgaca 367
                |||||||| |||||||||||| ||||||
Sbjct: 21627134 ctggagcaacccttcatcaagaatgaca 21627161



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 244      gagatgcagagggaggacct 263
                ||||||||||||||||||||
Sbjct: 21627038 gagatgcagagggaggacct 21627057
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>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 186030

 Score =  492 bits (248), Expect = e-136
 Identities = 380/424 (89%)
 Strand = Plus / Minus

                                                                          
Query: 14     acaagaagtcgtctcgcctaaccgctgaaggcctgattggatcgtacatccacgacaacc 73
              |||||||||| |||||||||||||| |||||||| |||||  | |||||||| ||||| |
Sbjct: 113227 acaagaagtcctctcgcctaaccgccgaaggcctaattggcgcctacatccatgacaatc 113168

                                                                          
Query: 74     gcataggatgcatgattgaaatcaactctgagaccgacttcgtggctcgcaatgagaaat 133
              | || || ||||||||||| ||||| || ||||||||||||||||||||||| ||||| |
Sbjct: 113167 ggattggttgcatgattgagatcaattccgagaccgacttcgtggctcgcaacgagaagt 113108

                                                                          
Query: 134    tcaaggagctggtgaatgacctcgcaatgcaagtggtggcatgcccgcaggtcgaatatg 193
              |||||||||||||||| |||||||| ||||| ||||||||||| || ||||| || ||||
Sbjct: 113107 tcaaggagctggtgaacgacctcgcgatgcaggtggtggcatgtccacaggttgagtatg 113048

                                                                          
Query: 194    tctcaatggacgacataccagagagtattgtcagcaaggagaaggagattgagatgcaga 253
              |||| || || ||||| ||||||||| |||||| ||||||||| ||||||||||||||||
Sbjct: 113047 tctccatagaggacatcccagagagtgttgtcatcaaggagaaagagattgagatgcaga 112988

                                                                          
Query: 254    gggaggacctgcagtcaaaacccgagaacatcagggagaagatcgtggaagggcggatat 313
              | |||||||| ||||| ||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct: 112987 gagaggaccttcagtccaaacctgagaacatcagggagaagatcgtcgaaggccggatat 112928

                                                                          
Query: 314    cgaagaggctcggcgtgatggccctcctggagcagcccttcatcaaggatgacagcaaga 373
              ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 112927 cgaagaggctcggcgtgctggccctcctggagcagcctttcatcaaggatgacagcaaga 112868

                                                                          
Query: 374    cggtgaaggatctcgtgaaggagacgatcgctggtctgggggagaacatcaaggtacgga 433
              ||||||||||||| |||||||||||||||||    || ||||||||||||||||||||||
Sbjct: 112867 cggtgaaggatcttgtgaaggagacgatcgccacccttggggagaacatcaaggtacgga 112808

                  
Query: 434    ggtt 437
              ||||
Sbjct: 112807 ggtt 112804



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                
Query: 495    cctgacatcaggagttgggcacattttgattcat 528
              ||||||||||||||||||||| ||||||||||||
Sbjct: 112749 cctgacatcaggagttgggcatattttgattcat 112716



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 647    tgtagatgacaagagagatcaa 668
              ||||||||||||||||||||||
Sbjct: 112582 tgtagatgacaagagagatcaa 112561



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 244    gagatgcagagggaggacct 263
              ||||||||||||||||||||
Sbjct: 113858 gagatgcagagggaggacct 113839



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 340    ctggagcagcccttcatcaaggatgaca 367
              |||||||| |||||||||||| ||||||
Sbjct: 113762 ctggagcaacccttcatcaagaatgaca 113735
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>dbj|AK067367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106B18, full
            insert sequence
          Length = 3861

 Score =  476 bits (240), Expect = e-131
 Identities = 378/424 (89%)
 Strand = Plus / Plus

                                                                        
Query: 14   acaagaagtcgtctcgcctaaccgctgaaggcctgattggatcgtacatccacgacaacc 73
            |||||||||| |||||||||||||| || ||||| |||||  | |||||||| ||||| |
Sbjct: 3171 acaagaagtcctctcgcctaaccgccgagggcctaattggcgcctacatccatgacaatc 3230

                                                                        
Query: 74   gcataggatgcatgattgaaatcaactctgagaccgacttcgtggctcgcaatgagaaat 133
            | || || ||||||||||| ||||| || ||||||||||||||||||||||| ||||| |
Sbjct: 3231 ggattggttgcatgattgagatcaattccgagaccgacttcgtggctcgcaacgagaagt 3290

                                                                        
Query: 134  tcaaggagctggtgaatgacctcgcaatgcaagtggtggcatgcccgcaggtcgaatatg 193
            |||||||||||||||| |||||||| ||||| ||||||||||| || ||||| || ||||
Sbjct: 3291 tcaaggagctggtgaacgacctcgcgatgcaggtggtggcatgtccacaggttgagtatg 3350

                                                                        
Query: 194  tctcaatggacgacataccagagagtattgtcagcaaggagaaggagattgagatgcaga 253
            |||| || || ||||| ||||||||| |||||| ||||||||| ||||||||||||||||
Sbjct: 3351 tctccatagaggacatcccagagagtgttgtcatcaaggagaaagagattgagatgcaga 3410

                                                                        
Query: 254  gggaggacctgcagtcaaaacccgagaacatcagggagaagatcgtggaagggcggatat 313
            | |||||||| ||||| ||||| ||||||||||||||||||||||| ||||| |||||||
Sbjct: 3411 gagaggaccttcagtccaaacctgagaacatcagggagaagatcgtcgaaggccggatat 3470

                                                                        
Query: 314  cgaagaggctcggcgtgatggccctcctggagcagcccttcatcaaggatgacagcaaga 373
            ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3471 cgaagaggctcggcgtgctggccctcctggagcagcctttcatcaaggatgacagcaaga 3530

                                                                        
Query: 374  cggtgaaggatctcgtgaaggagacgatcgctggtctgggggagaacatcaaggtacgga 433
            ||||||||||||| ||| |||||||||||||    || ||||||||||||||||||||||
Sbjct: 3531 cggtgaaggatcttgtggaggagacgatcgccacccttggggagaacatcaaggtacgga 3590

                
Query: 434  ggtt 437
            ||||
Sbjct: 3591 ggtt 3594



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                              
Query: 495  cctgacatcaggagttgggcacattttgattcat 528
            ||||||||||||||||||||| ||||||||||||
Sbjct: 3649 cctgacatcaggagttgggcatattttgattcat 3682



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 647  tgtagatgacaagagagatcaa 668
            ||||||||||||||||||||||
Sbjct: 3816 tgtagatgacaagagagatcaa 3837



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 340  ctggagcagcccttcatcaaggatgaca 367
            |||||||| |||||||||||| ||||||
Sbjct: 2774 ctggagcaacccttcatcaagaatgaca 2801



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 244  gagatgcagagggaggacct 263
            ||||||||||||||||||||
Sbjct: 2678 gagatgcagagggaggacct 2697
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>dbj|AK062059.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-C08, full
           insert sequence
          Length = 404

 Score =  200 bits (101), Expect = 4e-48
 Identities = 128/137 (93%)
 Strand = Plus / Plus

                                                                       
Query: 301 gaagggcggatatcgaagaggctcggcgtgatggccctcctggagcagcccttcatcaag 360
           ||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 1   gaaggccggatatcgaagaggctcggcgtgctggccctcctggagcagcctttcatcaag 60

                                                                       
Query: 361 gatgacagcaagacggtgaaggatctcgtgaaggagacgatcgctggtctgggggagaac 420
           |||||||||||||||||||||||||| |||||||||||||||||    || |||||||||
Sbjct: 61  gatgacagcaagacggtgaaggatcttgtgaaggagacgatcgccacccttggggagaac 120

                            
Query: 421 atcaaggtacggaggtt 437
           |||||||||||||||||
Sbjct: 121 atcaaggtacggaggtt 137



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 495 cctgacatcaggagttgggcacattttgattcat 528
           ||||||||||||||||||||| ||||||||||||
Sbjct: 192 cctgacatcaggagttgggcatattttgattcat 225



 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 647 tgtagatgacaagagagatcaa 668
           ||||||||||||||||||||||
Sbjct: 359 tgtagatgacaagagagatcaa 380
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>gb|AY109575.1| Zea mays CL1708_1 mRNA sequence
          Length = 2612

 Score =  151 bits (76), Expect = 3e-33
 Identities = 118/132 (89%)
 Strand = Plus / Plus

                                                                        
Query: 335  ccctcctggagcagcccttcatcaaggatgacagcaagacggtgaaggatctcgtgaagg 394
            |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2231 ccctcctggagcagccctacatcaaggacgacagcaagacggtgaaggatctcgtgaagg 2290

                                                                        
Query: 395  agacgatcgctggtctgggggagaacatcaaggtacggaggtttgtcaggtataccctcg 454
            ||||| ||||    || ||||||||||| ||||| |||||||||||| |||| ||||| |
Sbjct: 2291 agacggtcgcctcactcggggagaacattaaggtgcggaggtttgtccggtacaccctgg 2350

                        
Query: 455  gcgaaaactgat 466
            |||| |||||||
Sbjct: 2351 gcgagaactgat 2362



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 566  actcggttccatgtataattttgtatcacctgttact 602
            |||||||||||| | |||||  |||||||||||||||
Sbjct: 2483 actcggttccatctgtaattccgtatcacctgttact 2519
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>gb|AY107637.1| Zea mays PCO086097 mRNA sequence
          Length = 551

 Score =  101 bits (51), Expect = 3e-18
 Identities = 160/195 (82%), Gaps = 1/195 (0%)
 Strand = Plus / Plus

                                                                       
Query: 14  acaagaagtcgtctcgcctaaccgctgaaggcctgattggatcgtacatccacgacaacc 73
           ||||||| || ||||| ||| |||| ||||| ||| | || || ||||||||||||| ||
Sbjct: 298 acaagaaatcctctcggctagccgccgaaggactggtcggctcctacatccacgacagcc 357

                                                                       
Query: 74  gcataggatgcatgattgaaatcaactctgagaccgacttcgtggctcgcaatgagaaat 133
           |||| || |||||||| ||  ||||||| ||||||||||||||||| ||||| || || |
Sbjct: 358 gcatcgggtgcatgatcgaggtcaactccgagaccgacttcgtggcccgcaacgacaagt 417

                                                                       
Query: 134 tcaaggagctggtgaatgacct-cgcaatgcaagtggtggcatgcccgcaggtcgaatat 192
            || |||||||||||| ||||| ||| |||||||||||  | || |||||| |||| || 
Sbjct: 418 ccagggagctggtgaacgacctccgcgatgcaagtggtaacgtgtccgcagttcgactac 477

                          
Query: 193 gtctcaatggacgac 207
           |||||  ||||||||
Sbjct: 478 gtctcgttggacgac 492
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>ref|NM_001036666.1| Arabidopsis thaliana EMB2726; RNA binding / structural constituent of
            ribosome / translation elongation factor AT4G29060
            (EMB2726) transcript variant AT4G29060.2 mRNA, complete
            cds
          Length = 2616

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                        
Query: 238  gagattgagatgcagagggaggacctgcagtcaaaacccgagaacatcagggagaagatc 297
            |||||||||||||| || ||||| ||   ||| ||||| |||||||| ||||||||||| 
Sbjct: 2134 gagattgagatgcaaagagaggatcttttgtcgaaaccagagaacataagggagaagatt 2193

                    
Query: 298  gtggaagg 305
            ||||||||
Sbjct: 2194 gtggaagg 2201
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>ref|NM_119050.2| Arabidopsis thaliana EMB2726; RNA binding / structural constituent of
            ribosome / translation elongation factor AT4G29060
            (EMB2726) transcript variant AT4G29060.1 mRNA, complete
            cds
          Length = 3348

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                        
Query: 238  gagattgagatgcagagggaggacctgcagtcaaaacccgagaacatcagggagaagatc 297
            |||||||||||||| || ||||| ||   ||| ||||| |||||||| ||||||||||| 
Sbjct: 2866 gagattgagatgcaaagagaggatcttttgtcgaaaccagagaacataagggagaagatt 2925

                    
Query: 298  gtggaagg 305
            ||||||||
Sbjct: 2926 gtggaagg 2933
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>gb|AY661462.1| Arabidopsis thaliana chloroplast polyprotein of elongation factor Ts
            precursor, mRNA, complete cds, alternatively spliced;
            nuclear gene for chloroplast product
          Length = 2133

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                        
Query: 238  gagattgagatgcagagggaggacctgcagtcaaaacccgagaacatcagggagaagatc 297
            |||||||||||||| || ||||| ||   ||| ||||| |||||||| ||||||||||| 
Sbjct: 1903 gagattgagatgcaaagagaggatcttttgtcgaaaccagagaacataagggagaagatt 1962

                    
Query: 298  gtggaagg 305
            ||||||||
Sbjct: 1963 gtggaagg 1970
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>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70
          Length = 198429

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                         
Query: 238   gagattgagatgcagagggaggacctgcagtcaaaacccgagaacatcagggagaagatc 297
             |||||||||||||| || ||||| ||   ||| ||||| |||||||| ||||||||||| 
Sbjct: 49165 gagattgagatgcaaagagaggatcttttgtcgaaaccagagaacataagggagaagatt 49224

                     
Query: 298   gtggaagg 305
             ||||||||
Sbjct: 49225 gtggaagg 49232
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>emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25O24 (ESSA project)
          Length = 97714

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                         
Query: 238   gagattgagatgcagagggaggacctgcagtcaaaacccgagaacatcagggagaagatc 297
             |||||||||||||| || ||||| ||   ||| ||||| |||||||| ||||||||||| 
Sbjct: 74196 gagattgagatgcaaagagaggatcttttgtcgaaaccagagaacataagggagaagatt 74255

                     
Query: 298   gtggaagg 305
             ||||||||
Sbjct: 74256 gtggaagg 74263
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>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project)
          Length = 101679

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                         
Query: 238   gagattgagatgcagagggaggacctgcagtcaaaacccgagaacatcagggagaagatc 297
             |||||||||||||| || ||||| ||   ||| ||||| |||||||| ||||||||||| 
Sbjct: 32692 gagattgagatgcaaagagaggatcttttgtcgaaaccagagaacataagggagaagatt 32751

                     
Query: 298   gtggaagg 305
             ||||||||
Sbjct: 32752 gtggaagg 32759
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>gb|AY056792.1| Arabidopsis thaliana AT4g29060/F19B15_90 mRNA, complete cds
          Length = 3226

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                        
Query: 238  gagattgagatgcagagggaggacctgcagtcaaaacccgagaacatcagggagaagatc 297
            |||||||||||||| || ||||| ||   ||| ||||| |||||||| ||||||||||| 
Sbjct: 2840 gagattgagatgcaaagagaggatcttttgtcgaaaccagagaacataagggagaagatt 2899

                    
Query: 298  gtggaagg 305
            ||||||||
Sbjct: 2900 gtggaagg 2907
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>emb|BX828821.1|CNS0A2AV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL42ZA04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 951

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 238 gagattgagatgcagagggaggacctgcagtcaaaacccgagaacatcagggagaagatc 297
           |||||||||||||| || ||||| ||   ||| ||||| |||||||| ||||||||||| 
Sbjct: 590 gagattgagatgcaaagagaggatcttttgtcgaaaccagagaacataagggagaagatt 649

                   
Query: 298 gtggaagg 305
           ||||||||
Sbjct: 650 gtggaagg 657
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>emb|BX842656.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 11/11
          Length = 307337

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                 
Query: 88     attgaaatcaactctgagaccgacttcgtggctcg 122
              |||||||||||||||||||| |||||||| |||||
Sbjct: 180406 attgaaatcaactctgagactgacttcgttgctcg 180440
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>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                       
Query: 89      ttgaaatcaactctgagaccgacttcgtggctcgcaatga 128
               |||||||||||||||| || |||||||| ||||| |||||
Sbjct: 1711134 ttgaaatcaactctgaaactgacttcgtagctcgtaatga 1711095
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>dbj|BS000097.1| Pan troglodytes chromosome 22 clone:RP43-016D07, map 22, complete
              sequences
          Length = 184809

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 508    gttgggcacattttgattcatca 530
              |||||||||||||||||||||||
Sbjct: 133873 gttgggcacattttgattcatca 133851
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>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 533     atgcatagctgttgctagtttg 554
               ||||||||||||||||||||||
Sbjct: 2205608 atgcatagctgttgctagtttg 2205587
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>emb|CR727630.2|CNS0GODW Tetraodon nigroviridis full-length cDNA
          Length = 1055

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 109 gacttcgtggctcgcaatgagaaattcaaggagctggt 146
           ||||| ||||||||||||||||| ||| || |||||||
Sbjct: 404 gactttgtggctcgcaatgagaagttccagcagctggt 441
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>emb|CR664157.2|CNS0FBFN Tetraodon nigroviridis full-length cDNA
          Length = 1131

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 109 gacttcgtggctcgcaatgagaaattcaaggagctggt 146
           ||||| ||||||||||||||||| ||| || |||||||
Sbjct: 411 gactttgtggctcgcaatgagaagttccagcagctggt 448
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>emb|CR662603.2|CNS0FA8H Tetraodon nigroviridis full-length cDNA
          Length = 1113

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 109 gacttcgtggctcgcaatgagaaattcaaggagctggt 146
           ||||| ||||||||||||||||| ||| || |||||||
Sbjct: 404 gactttgtggctcgcaatgagaagttccagcagctggt 441
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>emb|CR645115.2|CNS0EWQP Tetraodon nigroviridis full-length cDNA
          Length = 1143

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 109 gacttcgtggctcgcaatgagaaattcaaggagctggt 146
           ||||| ||||||||||||||||| ||| || |||||||
Sbjct: 403 gactttgtggctcgcaatgagaagttccagcagctggt 440
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>emb|BX927154.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5,
             complete genome; segment 7/10
          Length = 349575

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 95    tcaactctgagaccgacttcgt 116
             ||||||||||||||||||||||
Sbjct: 14688 tcaactctgagaccgacttcgt 14667
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>gb|AC144473.8| Medicago truncatula clone mth2-15l5, complete sequence
          Length = 128860

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 126   tgagaaattcaaggagctggtgaatgacctcgcaatgcaagt 167
             |||||||||||||||| ||||  |||| || |||||||||||
Sbjct: 33902 tgagaaattcaaggagttggttgatgatcttgcaatgcaagt 33861
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>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 95      tcaactctgagaccgacttcgt 116
               ||||||||||||||||||||||
Sbjct: 2139613 tcaactctgagaccgacttcgt 2139592
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>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 89      ttgaaatcaactctgagaccgactt 113
               ||||||||||||||||||| |||||
Sbjct: 1883210 ttgaaatcaactctgagactgactt 1883186
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 95     tcaactctgagaccgacttcgtggc 119
              ||||||| |||||||||||||||||
Sbjct: 626675 tcaactccgagaccgacttcgtggc 626699
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>emb|BX276104.14| Mouse DNA sequence from clone RP24-313E3 on chromosome 4, complete
             sequence
          Length = 152376

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 229   aaggagaaggagattgagatg 249
             |||||||||||||||||||||
Sbjct: 94429 aaggagaaggagattgagatg 94449
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>gb|AF512506.1| Morone saxatilis class IIIB myosin short isoform mRNA, complete cds
          Length = 4020

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 336 cctcctggagcagcccttcatcaag 360
           |||||||||||| ||||||||||||
Sbjct: 879 cctcctggagcatcccttcatcaag 903
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 95      tcaactctgagaccgacttcgtggc 119
               ||||||| |||||||||||||||||
Sbjct: 2023666 tcaactccgagaccgacttcgtggc 2023642
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>gb|AC174772.1| Gasterosteus aculeatus clone VMRC28-84K14, complete sequence
          Length = 121286

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 336   cctcctggagcagcccttcatcaag 360
             |||||||||||| ||||||||||||
Sbjct: 45475 cctcctggagcatcccttcatcaag 45451
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>gb|AC146967.3| Bos taurus clone RP42-279M12, complete sequence
          Length = 186611

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 346    cagcccttcatcaaggatga 365
              ||||||||||||||||||||
Sbjct: 136244 cagcccttcatcaaggatga 136263
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>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence
          Length = 199737

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    gcagagggaggacctgcagt 268
              ||||||||||||||||||||
Sbjct: 128180 gcagagggaggacctgcagt 128161
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>gb|AF025679.2| Schistosoma mansoni clone pSmPf5 SR2 subfamily B non-LTR
            retrotransposon within SR2 subfamily B non-LTR
            retrotransposon
          Length = 3687

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 242  ttgagatgcagagggaggac 261
            ||||||||||||||||||||
Sbjct: 1105 ttgagatgcagagggaggac 1086
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>gb|AC104514.2| Drosophila melanogaster clone BACR22L21, complete sequence
          Length = 170718

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 549   agtttgtactcagttgtact 568
             ||||||||||||||||||||
Sbjct: 13502 agtttgtactcagttgtact 13521
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>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence
          Length = 279448

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   agaacatcagggagaagatc 297
             ||||||||||||||||||||
Sbjct: 38413 agaacatcagggagaagatc 38394
to top
>gb|AY603485.1| Exostoma labiatum ribosomal protein S7 (rpS7) gene, exons 2, 3 and
           partial cds
          Length = 167

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 agaacatcagggagaagatc 297
           ||||||||||||||||||||
Sbjct: 85  agaacatcagggagaagatc 66
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 343    gagcagcccttcatcaagga 362
              ||||||||||||||||||||
Sbjct: 692751 gagcagcccttcatcaagga 692770
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>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 346     cagcccttcatcaaggatga 365
               ||||||||||||||||||||
Sbjct: 2022304 cagcccttcatcaaggatga 2022323
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>gb|AC115361.5| Mus musculus BAC clone RP24-76P12 from chromosome 8, complete sequence
          Length = 235095

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 575   catgtataattttgtatcac 594
             ||||||||||||||||||||
Sbjct: 59206 catgtataattttgtatcac 59225
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 126     tgagaaattcaaggagctgg 145
               ||||||||||||||||||||
Sbjct: 2458746 tgagaaattcaaggagctgg 2458727
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>emb|AL022337.19|HS796E4 Human DNA sequence from clone CTA-796E4 on chromosome 22q11.22-12.1,
             complete sequence
          Length = 134205

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 229   aaggagaaggagattgagatgcagaggg 256
             |||||||||||||  |||||||||||||
Sbjct: 25771 aaggagaaggagagagagatgcagaggg 25744
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>emb|X83598.1|TTRTP T.thermophilus rpsB, tsf and pyrH genes
          Length = 1124

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 340 ctggagcagcccttcatcaaggatgaca 367
           ||||||||||||||| ||||||| ||||
Sbjct: 736 ctggagcagcccttcgtcaaggacgaca 763
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>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome
          Length = 1931047

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 277     gagaacatcagggagaagatcgtg 300
               ||||||| ||||||||||||||||
Sbjct: 1613932 gagaacaacagggagaagatcgtg 1613909
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>emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on chromosome 4, complete
              sequence
          Length = 192919

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 512    ggcacattttgattcatcat 531
              ||||||||||||||||||||
Sbjct: 105593 ggcacattttgattcatcat 105574
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>gb|AC112165.2| Homo sapiens chromosome 5 clone CTB-128F12, complete sequence
          Length = 113127

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 251   agagggaggacctgcagtca 270
             ||||||||||||||||||||
Sbjct: 91421 agagggaggacctgcagtca 91440
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>gb|AC113370.2| Homo sapiens chromosome 5 clone RP11-124O5, complete sequence
          Length = 189590

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 572   ttccatgtataattttgtat 591
             ||||||||||||||||||||
Sbjct: 20031 ttccatgtataattttgtat 20012
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>gb|AC093294.3| Homo sapiens chromosome 5 clone RP11-524C16, complete sequence
          Length = 171739

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 572    ttccatgtataattttgtat 591
              ||||||||||||||||||||
Sbjct: 138416 ttccatgtataattttgtat 138397
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>gb|AC091500.1|AC091500 Drosophila melanogaster, chromosome 2R, region 54F-55A, BAC clone
              BACR20E20, complete sequence
          Length = 164567

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 549    agtttgtactcagttgtact 568
              ||||||||||||||||||||
Sbjct: 163367 agtttgtactcagttgtact 163386
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 603     atcgttcctggttccaaacc 622
               ||||||||||||||||||||
Sbjct: 6355279 atcgttcctggttccaaacc 6355298
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>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0515G01
          Length = 175072

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 603    atcgttcctggttccaaacc 622
              ||||||||||||||||||||
Sbjct: 126345 atcgttcctggttccaaacc 126364
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 340    ctggagcagcccttcatcaaggatgaca 367
              ||||||||||||||| ||||||| ||||
Sbjct: 821391 ctggagcagcccttcgtcaaggacgaca 821364
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 85      atgattgaaatcaactctgagaccgacttcgt 116
               ||||| || |||||||| ||||||||||||||
Sbjct: 4278575 atgatcgagatcaactccgagaccgacttcgt 4278544
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>emb|BX005447.8| Zebrafish DNA sequence from clone DKEY-29B14, complete sequence
          Length = 283185

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 536    catagctgttgctagtttgt 555
              ||||||||||||||||||||
Sbjct: 181024 catagctgttgctagtttgt 181005
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>emb|BX088551.7| Zebrafish DNA sequence from clone CH211-106A19 in linkage group 5,
             complete sequence
          Length = 184417

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 536   catagctgttgctagtttgt 555
             ||||||||||||||||||||
Sbjct: 69353 catagctgttgctagtttgt 69372
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>gb|AC153868.3| Mus musculus BAC RP23-384D16 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 211603

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 416    agaacatcaaggtacggaggtttg 439
              |||||||||||||| |||||||||
Sbjct: 188402 agaacatcaaggtagggaggtttg 188425
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>gb|AC153578.4| Mus musculus 6 BAC RP23-218P2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 228417

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 416    agaacatcaaggtacggaggtttg 439
              |||||||||||||| |||||||||
Sbjct: 109821 agaacatcaaggtagggaggtttg 109844
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>gb|AF025673.1|AF025673 Schistosoma mansoni SR2 subfamily A non-LTR retrotransposon,
           internal fragment BS7, reverse transcriptase (pol) gene,
           partial cds
          Length = 966

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 242 ttgagatgcagagggaggac 261
           ||||||||||||||||||||
Sbjct: 514 ttgagatgcagagggaggac 495
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>gb|U50042.1|DDU50042 Dictyostelium discoideum repE homolog of UV-damaged DNA binding
           protein (repE) gene, complete cds
          Length = 4122

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 576 atgtataattttgtatcacctgtt 599
           |||||||||||||||||| |||||
Sbjct: 350 atgtataattttgtatcaactgtt 373
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>gb|AE003801.4| Drosophila melanogaster chromosome 2R, section 49 of 73 of the complete
             sequence
          Length = 254899

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 549   agtttgtactcagttgtact 568
             ||||||||||||||||||||
Sbjct: 90624 agtttgtactcagttgtact 90643
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>emb|CR942373.2| Xenopus tropicalis finished cDNA, clone TGas090b21
          Length = 2585

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 249 gcagagggaggacctgcagt 268
           ||||||||||||||||||||
Sbjct: 740 gcagagggaggacctgcagt 759
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 340    ctggagcagcccttcatcaaggatgaca 367
              ||||||||||||||| ||||||| ||||
Sbjct: 492471 ctggagcagcccttcgtcaaggacgaca 492444
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>gb|AC004640.1|AC004640 Drosophila melanogaster DNA sequence (P1s DS07528 (D169) and DS06665
             (D220)), complete sequence
          Length = 79248

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 549   agtttgtactcagttgtact 568
             ||||||||||||||||||||
Sbjct: 67868 agtttgtactcagttgtact 67887
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>gb|AC122284.5| Mus musculus BAC clone RP23-246A5 from 6, complete sequence
          Length = 189521

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 416    agaacatcaaggtacggaggtttg 439
              |||||||||||||| |||||||||
Sbjct: 160292 agaacatcaaggtagggaggtttg 160269
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>gb|AC142414.3| Mus musculus BAC clone RP23-372N15 from 8, complete sequence
          Length = 192261

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 575   catgtataattttgtatcac 594
             ||||||||||||||||||||
Sbjct: 66698 catgtataattttgtatcac 66679
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>emb|AL806516.4| Mouse DNA sequence from clone RP23-453N20 on chromosome X, complete
             sequence
          Length = 179534

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 545   tgctagtttgtactcagttg 564
             ||||||||||||||||||||
Sbjct: 79674 tgctagtttgtactcagttg 79655
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>gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome 17, complete sequence
          Length = 224370

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 249    gcagagggaggacctgcagt 268
              ||||||||||||||||||||
Sbjct: 196271 gcagagggaggacctgcagt 196252
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>dbj|AB238686.1| Thiobacillus thioparus scnC, orf1, orf2, orf3, orf4, orf5 genes for
            thiocyanate hydrolase gamma subunit, thiocyanate
            hydrolase activator, putative ABC transporter subunit,
            putative ABC transporter subunit, putative ABC
            transporter subunit, putative ABC transporter subunit,
            partial and complete cds
          Length = 4910

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 369  caagacggtgaaggatctcg 388
            ||||||||||||||||||||
Sbjct: 2472 caagacggtgaaggatctcg 2491


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,070,384
Number of Sequences: 3902068
Number of extensions: 5070384
Number of successful extensions: 96298
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95772
Number of HSP's gapped (non-prelim): 519
length of query: 668
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 645
effective length of database: 17,143,297,704
effective search space: 11057427019080
effective search space used: 11057427019080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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