ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd21f14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TPT_MAIZE (P49133) Triose phosphate/phosphate translocator, chlo... 96 3e-20
2TPT_SPIOL (P11869) Triose phosphate/phosphate translocator, chlo... 96 4e-20
3TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chlo... 95 6e-20
4TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chl... 94 1e-19
5TPT_PEA (P21727) Triose phosphate/phosphate translocator, chloro... 92 4e-19
6TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chlo... 89 3e-18
7TPT_FLATR (P49132) Triose phosphate/phosphate translocator, chlo... 88 7e-18
8GPT1_ARATH (Q9M5A9) Glucose-6-phosphate/phosphate translocator 1... 37 0.019
9GPT2_ARATH (Q94B38) Glucose-6-phosphate/phosphate translocator 2... 34 0.096

>TPT_MAIZE (P49133) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 409

 Score = 95.9 bits (237), Expect = 3e-20
 Identities = 46/52 (88%), Positives = 50/52 (96%)
 Frame = +3

Query: 3   KKAMTDMDSTNVYAYISIIALVVCIPPALIIEGPQLMQYGLNDAIAKVGLTK 158
           KKAMTDMDSTNVYAYISIIAL+VCIPPALI EGP+LMQ+G +DAIAKVGLTK
Sbjct: 270 KKAMTDMDSTNVYAYISIIALIVCIPPALIFEGPKLMQHGFSDAIAKVGLTK 321



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>TPT_SPIOL (P11869) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (p36) (E29)
          Length = 404

 Score = 95.5 bits (236), Expect = 4e-20
 Identities = 44/52 (84%), Positives = 50/52 (96%)
 Frame = +3

Query: 3   KKAMTDMDSTNVYAYISIIALVVCIPPALIIEGPQLMQYGLNDAIAKVGLTK 158
           KKAMTDMDSTN+YAYISIIAL VC+PPA+I+EGPQLM++G NDAIAKVGLTK
Sbjct: 264 KKAMTDMDSTNIYAYISIIALFVCLPPAIIVEGPQLMKHGFNDAIAKVGLTK 315



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>TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (E29)
          Length = 414

 Score = 94.7 bits (234), Expect = 6e-20
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = +3

Query: 3   KKAMTDMDSTNVYAYISIIALVVCIPPALIIEGPQLMQYGLNDAIAKVGLTK 158
           KKAMTDMDSTNVYAYISIIAL+ C+PPA+ IEGPQL+Q+G NDAIAKVGLTK
Sbjct: 274 KKAMTDMDSTNVYAYISIIALIFCLPPAIFIEGPQLLQHGFNDAIAKVGLTK 325



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>TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 407

 Score = 94.0 bits (232), Expect = 1e-19
 Identities = 43/52 (82%), Positives = 50/52 (96%)
 Frame = +3

Query: 3   KKAMTDMDSTNVYAYISIIALVVCIPPALIIEGPQLMQYGLNDAIAKVGLTK 158
           KKAMTDMDSTNVYAYISIIAL VC+PPA+I+EGPQL+++G NDAIAKVG+TK
Sbjct: 267 KKAMTDMDSTNVYAYISIIALFVCLPPAIIVEGPQLLKHGFNDAIAKVGMTK 318



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>TPT_PEA (P21727) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (p36) (E30)
          Length = 402

 Score = 92.0 bits (227), Expect = 4e-19
 Identities = 44/52 (84%), Positives = 48/52 (92%)
 Frame = +3

Query: 3   KKAMTDMDSTNVYAYISIIALVVCIPPALIIEGPQLMQYGLNDAIAKVGLTK 158
           KKAMTDMDSTN+YAYISIIAL+VCIPPALIIEGP L++ G NDAIAKVGL K
Sbjct: 262 KKAMTDMDSTNIYAYISIIALIVCIPPALIIEGPTLLKTGFNDAIAKVGLVK 313



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>TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 408

 Score = 89.0 bits (219), Expect = 3e-18
 Identities = 40/52 (76%), Positives = 50/52 (96%)
 Frame = +3

Query: 3   KKAMTDMDSTNVYAYISIIALVVCIPPALIIEGPQLMQYGLNDAIAKVGLTK 158
           KKAMTDMDSTN+YAYISII+L+ CIPPA+I+EGPQL+++G +DAIAKVG+TK
Sbjct: 268 KKAMTDMDSTNLYAYISIISLLFCIPPAIILEGPQLLKHGFSDAIAKVGMTK 319



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>TPT_FLATR (P49132) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 407

 Score = 87.8 bits (216), Expect = 7e-18
 Identities = 40/52 (76%), Positives = 48/52 (92%)
 Frame = +3

Query: 3   KKAMTDMDSTNVYAYISIIALVVCIPPALIIEGPQLMQYGLNDAIAKVGLTK 158
           KKAMTDMDSTN+YAYISIIAL+ CIPPA++ EGPQL+++G NDAIAKVG+ K
Sbjct: 267 KKAMTDMDSTNLYAYISIIALLFCIPPAVLFEGPQLLKHGFNDAIAKVGMIK 318



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>GPT1_ARATH (Q9M5A9) Glucose-6-phosphate/phosphate translocator 1, chloroplast|
           precursor
          Length = 388

 Score = 36.6 bits (83), Expect = 0.019
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +3

Query: 3   KKAMT--DMDSTNVYAYISIIALVVCIPPALIIEGPQLMQYGLNDAIAKVG 149
           KK M    +   N YA +S+++L++  P A+ +EGPQ+   G   A+A VG
Sbjct: 259 KKGMKGKSVSGMNYYACLSMLSLLILTPFAIAVEGPQMWVDGWQTALATVG 309



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>GPT2_ARATH (Q94B38) Glucose-6-phosphate/phosphate translocator 2, chloroplast|
           precursor
          Length = 388

 Score = 34.3 bits (77), Expect = 0.096
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
 Frame = +3

Query: 3   KKAMT--DMDSTNVYAYISIIALVVCIPPALIIEGPQLMQYGLNDAIAKVG 149
           KK M    +   N YA +S+++LV+  P ++ +E PQ+   G  +A+++VG
Sbjct: 259 KKGMKGKSVSGMNYYACLSMMSLVILTPFSIAVEVPQMWAAGWQNAVSQVG 309


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,814,255
Number of Sequences: 219361
Number of extensions: 234520
Number of successful extensions: 542
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 80,573,946
effective HSP length: 28
effective length of database: 74,431,838
effective search space used: 1786364112
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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