| Clone Name | basd21f14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF314182.2|AF314182 Triticum aestivum triose phosphate translocator (tpt1) mRNA, complete cds Length = 1484 Score = 274 bits (138), Expect = 7e-71 Identities = 153/158 (96%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctcaataattg 60 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 785 ccaagaaagccatgactgatatggatagcaccaacgtgtatgcttacatctcaataattg 844 Query: 61 ctctagttgtctgcataccacctgcacttattattgaaggaccacaactaatgcagtatg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 845 ctctagttgtctgcataccacctgcacttattattgaaggaccacaactaatgcagtacg 904 Query: 121 gattaaacgatgcaattgcaaaagtaggtctgacaaaa 158 |||||||||||||||||||||||||||| |||||||| Sbjct: 905 gattaaacgatgcaattgcaaaagtaggaatgacaaaa 942
>gb|AY028422.1| Oryza sativa triose phosphate/phosphate translocator mRNA, complete cds Length = 1541 Score = 266 bits (134), Expect = 2e-68 Identities = 152/158 (96%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctcaataattg 60 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 830 ccaagaaagccatgactgatatggatagcaccaacgtgtatgcttacatctcaataattg 889 Query: 61 ctctagttgtctgcataccacctgcacttattattgaaggaccacaactaatgcagtatg 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 890 ctctagttgtctgcataccacctgcacttattattgaaggaccacaactagtgcagtacg 949 Query: 121 gattaaacgatgcaattgcaaaagtaggtctgacaaaa 158 |||||||||||||||||||||||||||| |||||||| Sbjct: 950 gattaaacgatgcaattgcaaaagtaggaatgacaaaa 987
>dbj|AK073395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044E21, full insert sequence Length = 1467 Score = 155 bits (78), Expect = 5e-35 Identities = 120/134 (89%) Strand = Plus / Plus Query: 12 atgactgacatggatagcaccaacgtgtatgcttacatctcaataattgctctagttgtc 71 |||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||| Sbjct: 763 atgactgacatggatagcaccaacctgtatgcgtacatctcaataattgctctccttgtc 822 Query: 72 tgcataccacctgcacttattattgaaggaccacaactaatgcagtatggattaaacgat 131 ||||| || |||||| |||||||||||||||| |||||| ||||| ||||||| || ||| Sbjct: 823 tgcatccctcctgcaattattattgaaggacctcaactagtgcagcatggattcaaagat 882 Query: 132 gcaattgcaaaagt 145 || ||||| ||||| Sbjct: 883 gctattgctaaagt 896
>dbj|AK059788.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-D11, full insert sequence Length = 1464 Score = 155 bits (78), Expect = 5e-35 Identities = 120/134 (89%) Strand = Plus / Plus Query: 12 atgactgacatggatagcaccaacgtgtatgcttacatctcaataattgctctagttgtc 71 |||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||| Sbjct: 804 atgactgacatggatagcaccaacctgtatgcgtacatctcaataattgctctccttgtc 863 Query: 72 tgcataccacctgcacttattattgaaggaccacaactaatgcagtatggattaaacgat 131 ||||| || |||||| |||||||||||||||| |||||| ||||| ||||||| || ||| Sbjct: 864 tgcatccctcctgcaattattattgaaggacctcaactagtgcagcatggattcaaagat 923 Query: 132 gcaattgcaaaagt 145 || ||||| ||||| Sbjct: 924 gctattgctaaagt 937
>emb|Z26595.1|CHZMCPT Z.mays zmcpt mRNA triose phosphate/phosphate translocator Length = 1588 Score = 153 bits (77), Expect = 2e-34 Identities = 137/157 (87%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctcaataattg 60 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 838 ccaagaaagctatgactgacatggatagcaccaacgtgtatgcttacatctcaataatcg 897 Query: 61 ctctagttgtctgcataccacctgcacttattattgaaggaccacaactaatgcagtatg 120 ||||| |||| ||||| ||||||||| | || ||||||| || | ||||||||| ||| Sbjct: 898 ctctaattgtttgcattccacctgcattgatctttgaagggcccaagctaatgcagcatg 957 Query: 121 gattaaacgatgcaattgcaaaagtaggtctgacaaa 157 |||| | ||||| ||||||||||||||| ||||||| Sbjct: 958 gatttagtgatgccattgcaaaagtaggtttgacaaa 994
>gb|AY103868.1| Zea mays PCO116159 mRNA sequence Length = 1612 Score = 153 bits (77), Expect = 2e-34 Identities = 137/157 (87%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctcaataattg 60 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 851 ccaagaaagctatgactgacatggatagcaccaacgtgtatgcttacatctcaataatcg 910 Query: 61 ctctagttgtctgcataccacctgcacttattattgaaggaccacaactaatgcagtatg 120 ||||| |||| ||||| ||||||||| | || ||||||| || | ||||||||| ||| Sbjct: 911 ctctaattgtttgcattccacctgcattgatctttgaagggcccaagctaatgcagcatg 970 Query: 121 gattaaacgatgcaattgcaaaagtaggtctgacaaa 157 |||| | ||||| ||||||||||||||| ||||||| Sbjct: 971 gatttagtgatgccattgcaaaagtaggtttgacaaa 1007
>ref|NM_188702.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1254 Score = 129 bits (65), Expect = 3e-27 Identities = 134/157 (85%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctcaataattg 60 |||| ||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||| Sbjct: 830 ccaagaaagctatgactgatatggatagcaccaatgtgtatgcttatatctcaataattg 889 Query: 61 ctctagttgtctgcataccacctgcacttattattgaaggaccacaactaatgcagtatg 120 | || |||| ||||| ||||| ||| | || || || ||||| |||||| ||||| ||| Sbjct: 890 cccttattgtgtgcattccaccagcagtgatcatcgagggacctcaactattgcagcatg 949 Query: 121 gattaaacgatgcaattgcaaaagtaggtctgacaaa 157 | || ||||||||||||||||||||||| ||||||| Sbjct: 950 gttttaacgatgcaattgcaaaagtaggcttgacaaa 986
>emb|AJ437264.1|OSA437264 Oryza sativa partial mRNA for phosphate translocator-like protein Length = 537 Score = 129 bits (65), Expect = 3e-27 Identities = 134/157 (85%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctcaataattg 60 |||| ||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||| Sbjct: 362 ccaagaaagctatgactgatatggatagcaccaatgtgtatgcttatatctcaataattg 421 Query: 61 ctctagttgtctgcataccacctgcacttattattgaaggaccacaactaatgcagtatg 120 | || |||| ||||| ||||| ||| | || || || ||||| |||||| ||||| ||| Sbjct: 422 cccttattgtgtgcattccaccagcagtgatcatcgagggacctcaactattgcagcatg 481 Query: 121 gattaaacgatgcaattgcaaaagtaggtctgacaaa 157 | || ||||||||||||||||||||||| ||||||| Sbjct: 482 gttttaacgatgcaattgcaaaagtaggcttgacaaa 518
>dbj|AK099799.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097M22, full insert sequence Length = 1605 Score = 129 bits (65), Expect = 3e-27 Identities = 134/157 (85%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctcaataattg 60 |||| ||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||| Sbjct: 862 ccaagaaagctatgactgatatggatagcaccaatgtgtatgcttatatctcaataattg 921 Query: 61 ctctagttgtctgcataccacctgcacttattattgaaggaccacaactaatgcagtatg 120 | || |||| ||||| ||||| ||| | || || || ||||| |||||| ||||| ||| Sbjct: 922 cccttattgtgtgcattccaccagcagtgatcatcgagggacctcaactattgcagcatg 981 Query: 121 gattaaacgatgcaattgcaaaagtaggtctgacaaa 157 | || ||||||||||||||||||||||| ||||||| Sbjct: 982 gttttaacgatgcaattgcaaaagtaggcttgacaaa 1018
>gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B04, complete sequence Length = 95383 Score = 101 bits (51), Expect = 6e-19 Identities = 72/79 (91%) Strand = Plus / Plus Query: 14 gactgacatggatagcaccaacgtgtatgcttacatctcaataattgctctagttgtctg 73 |||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||| Sbjct: 83881 gactgacatggatagcaccaacctgtatgcgtacatctcaataattgctctccttgtctg 83940 Query: 74 cataccacctgcacttatt 92 ||| || |||||| ||||| Sbjct: 83941 catccctcctgcaattatt 83959 Score = 50.1 bits (25), Expect = 0.002 Identities = 46/53 (86%) Strand = Plus / Plus Query: 93 attgaaggaccacaactaatgcagtatggattaaacgatgcaattgcaaaagt 145 ||||||||||| |||||| ||||| ||||||| || ||||| ||||| ||||| Sbjct: 86047 attgaaggacctcaactagtgcagcatggattcaaagatgctattgctaaagt 86099
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 101 bits (51), Expect = 6e-19 Identities = 72/79 (91%) Strand = Plus / Plus Query: 14 gactgacatggatagcaccaacgtgtatgcttacatctcaataattgctctagttgtctg 73 |||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||| Sbjct: 8505611 gactgacatggatagcaccaacctgtatgcgtacatctcaataattgctctccttgtctg 8505670 Query: 74 cataccacctgcacttatt 92 ||| || |||||| ||||| Sbjct: 8505671 catccctcctgcaattatt 8505689 Score = 50.1 bits (25), Expect = 0.002 Identities = 46/53 (86%) Strand = Plus / Plus Query: 93 attgaaggaccacaactaatgcagtatggattaaacgatgcaattgcaaaagt 145 ||||||||||| |||||| ||||| ||||||| || ||||| ||||| ||||| Sbjct: 8507777 attgaaggacctcaactagtgcagcatggattcaaagatgctattgctaaagt 8507829
>gb|AY109671.1| Zea mays CL14476_1 mRNA sequence Length = 713 Score = 85.7 bits (43), Expect = 4e-14 Identities = 100/121 (82%) Strand = Plus / Minus Query: 25 atagcaccaacgtgtatgcttacatctcaataattgctctagttgtctgcataccacctg 84 |||| |||||| ||||||| ||||| |||||||||||||| |||||||||| || Sbjct: 713 atagtaccaacttgtatgcatacatatcaataattgctctctttgtctgcatnnnnnntg 654 Query: 85 cacttattattgaaggaccacaactaatgcagtatggattaaacgatgcaattgcaaaag 144 || |||||||||||||||| ||| || ||||| |||| || || ||||||||||| |||| Sbjct: 653 caattattattgaaggacctcaattagtgcagcatggttttaaagatgcaattgccaaag 594 Query: 145 t 145 | Sbjct: 593 t 593
>emb|X68077.1|PSPTCPA P. sativum mRNA for phosphate translocator Length = 1496 Score = 77.8 bits (39), Expect = 9e-12 Identities = 81/95 (85%) Strand = Plus / Plus Query: 6 aaagccatgactgacatggatagcaccaacgtgtatgcttacatctcaataattgctcta 65 |||||||||||||| |||||||| ||||| | ||||| ||||| ||||| ||||||||| Sbjct: 829 aaagccatgactgatatggatagtaccaatatctatgcctacatttcaatcattgctcta 888 Query: 66 gttgtctgcataccacctgcacttattattgaagg 100 ||||||||||||| || || | ||||||||||| Sbjct: 889 attgtctgcataccgccggccttaattattgaagg 923
>emb|X54639.1|PSCIRP36 P. sativum mRNA for chloroplast import receptor p36 Length = 1490 Score = 77.8 bits (39), Expect = 9e-12 Identities = 81/95 (85%) Strand = Plus / Plus Query: 6 aaagccatgactgacatggatagcaccaacgtgtatgcttacatctcaataattgctcta 65 |||||||||||||| |||||||| ||||| | ||||| ||||| ||||| ||||||||| Sbjct: 824 aaagccatgactgatatggatagtaccaatatctatgcctacatttcaatcattgctcta 883 Query: 66 gttgtctgcataccacctgcacttattattgaagg 100 ||||||||||||| || || | ||||||||||| Sbjct: 884 attgtctgcataccgccggccttaattattgaagg 918
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 73.8 bits (37), Expect = 1e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 14 gactgacatggatagcaccaacgtgtatgcttacatctcaataattgctctagttgtctg 73 |||||| |||||||||||||| ||||||||||| |||||||||||||| || |||| || Sbjct: 7718991 gactgatatggatagcaccaatgtgtatgcttatatctcaataattgcccttattgtgtg 7718932 Query: 74 cataccacc 82 ||| ||||| Sbjct: 7718931 cattccacc 7718923 Score = 61.9 bits (31), Expect = 5e-07 Identities = 52/59 (88%) Strand = Plus / Minus Query: 99 ggaccacaactaatgcagtatggattaaacgatgcaattgcaaaagtaggtctgacaaa 157 ||||| |||||| ||||| |||| || ||||||||||||||||||||||| ||||||| Sbjct: 7718816 ggacctcaactattgcagcatggttttaacgatgcaattgcaaaagtaggcttgacaaa 7718758
>dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0010K01 Length = 144404 Score = 73.8 bits (37), Expect = 1e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 14 gactgacatggatagcaccaacgtgtatgcttacatctcaataattgctctagttgtctg 73 |||||| |||||||||||||| ||||||||||| |||||||||||||| || |||| || Sbjct: 21572 gactgatatggatagcaccaatgtgtatgcttatatctcaataattgcccttattgtgtg 21513 Query: 74 cataccacc 82 ||| ||||| Sbjct: 21512 cattccacc 21504 Score = 61.9 bits (31), Expect = 5e-07 Identities = 52/59 (88%) Strand = Plus / Minus Query: 99 ggaccacaactaatgcagtatggattaaacgatgcaattgcaaaagtaggtctgacaaa 157 ||||| |||||| ||||| |||| || ||||||||||||||||||||||| ||||||| Sbjct: 21397 ggacctcaactattgcagcatggttttaacgatgcaattgcaaaagtaggcttgacaaa 21339
>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086P08 Length = 145312 Score = 73.8 bits (37), Expect = 1e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 14 gactgacatggatagcaccaacgtgtatgcttacatctcaataattgctctagttgtctg 73 |||||| |||||||||||||| ||||||||||| |||||||||||||| || |||| || Sbjct: 129567 gactgatatggatagcaccaatgtgtatgcttatatctcaataattgcccttattgtgtg 129508 Query: 74 cataccacc 82 ||| ||||| Sbjct: 129507 cattccacc 129499 Score = 61.9 bits (31), Expect = 5e-07 Identities = 52/59 (88%) Strand = Plus / Minus Query: 99 ggaccacaactaatgcagtatggattaaacgatgcaattgcaaaagtaggtctgacaaa 157 ||||| |||||| ||||| |||| || ||||||||||||||||||||||| ||||||| Sbjct: 129392 ggacctcaactattgcagcatggttttaacgatgcaattgcaaaagtaggcttgacaaa 129334
>gb|AF223358.1| Mesembryanthemum crystallinum triose phosphate/phosphate translocator precursor (TPT) mRNA, complete cds Length = 1458 Score = 58.0 bits (29), Expect = 8e-06 Identities = 110/137 (80%) Strand = Plus / Plus Query: 9 gccatgactgacatggatagcaccaacgtgtatgcttacatctcaataattgctctagtt 68 |||||||| |||||||| || || ||||| ||||| ||||| | || || ||||| | Sbjct: 829 gccatgaccgacatggacagtactaacgtctatgcctacattaccatcatcgctctcttc 888 Query: 69 gtctgcataccacctgcacttattattgaaggaccacaactaatgcagtatggattaaac 128 || ||||| ||||||||||| ||||| || || || ||||| || ||||||| || ||| Sbjct: 889 gtttgcatcccacctgcactgattatcgagggtcctcaactcatcaagtatgggtttaac 948 Query: 129 gatgcaattgcaaaagt 145 ||||| ||||||||||| Sbjct: 949 gatgccattgcaaaagt 965
>emb|Z26633.1|CHFPCPT F.pringlei fpcpt mRNA for triose phosphate/phosphate translocator Length = 1317 Score = 56.0 bits (28), Expect = 3e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 6 aaagccatgactgacatggatagcaccaacgtgtatgcttacat 49 ||||| |||||||| |||||||| |||||| ||||||||||||| Sbjct: 819 aaagcaatgactgatatggatagtaccaacttgtatgcttacat 862
>gb|AY942814.1| Glycine max putative plastid triose phophate translocator mRNA, partial cds; nuclear gene for plastid product Length = 798 Score = 56.0 bits (28), Expect = 3e-05 Identities = 67/80 (83%) Strand = Plus / Plus Query: 6 aaagccatgactgacatggatagcaccaacgtgtatgcttacatctcaataattgctcta 65 |||||||||||||| ||||| || ||||| | ||||| ||||| || || ||||||||| Sbjct: 343 aaagccatgactgatatggacagtaccaatatctatgcctacatttccatcattgctcta 402 Query: 66 gttgtctgcataccacctgc 85 |||| || ||||||||||| Sbjct: 403 attgtgtgtataccacctgc 422
>emb|X13754.1|SOPHTRAN Spinach mRNA for chloroplast phosphate translocator protein Length = 1432 Score = 56.0 bits (28), Expect = 3e-05 Identities = 112/140 (80%) Strand = Plus / Plus Query: 6 aaagccatgactgacatggatagcaccaacgtgtatgcttacatctcaataattgctcta 65 |||||||||||||||||||| || ||||| | ||||| ||||| || ||||||||||| Sbjct: 814 aaagccatgactgacatggacagtaccaatatctatgcctacatttccataattgctctg 873 Query: 66 gttgtctgcataccacctgcacttattattgaaggaccacaactaatgcagtatggatta 125 |||| ||| | || |||||| | ||| | || || || ||||| ||| || |||| || Sbjct: 874 tttgtttgccttccccctgcaatcattgtcgagggtcctcaacttatgaagcatgggttc 933 Query: 126 aacgatgcaattgcaaaagt 145 |||||||| ||||| ||||| Sbjct: 934 aacgatgccattgcgaaagt 953
>gb|BT013330.1| Lycopersicon esculentum clone 135053F, mRNA sequence Length = 1501 Score = 54.0 bits (27), Expect = 1e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 6 aaagccatgactgacatggatagcaccaacgtgtatgcttacatctcaataattgctct 64 ||||| |||||||| |||||||| || ||||||||||| ||||| || || |||||||| Sbjct: 816 aaagctatgactgatatggatagtactaacgtgtatgcctacatatccatcattgctct 874
>emb|Z26632.1|CHFTCPT F.trinervia ftcpt mRNA for triose phosphate/phosphate translocator Length = 1441 Score = 54.0 bits (27), Expect = 1e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 6 aaagccatgactgacatggatagcaccaacgtgtatgcttacatctcaataattgctct 64 ||||| |||||||| |||||||| || ||| ||||||||||||| || || |||||||| Sbjct: 858 aaagcaatgactgatatggatagtactaacttgtatgcttacatttccatcattgctct 916
>emb|X92656.1|LETPT L.esculentum mRNA for triose phosphate translocator Length = 993 Score = 54.0 bits (27), Expect = 1e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 6 aaagccatgactgacatggatagcaccaacgtgtatgcttacatctcaataattgctct 64 ||||| |||||||| |||||||| || ||||||||||| ||||| || || |||||||| Sbjct: 571 aaagctatgactgatatggatagtactaacgtgtatgcctacatatccatcattgctct 629
>emb|X67045.1|STTPTMR S.tuberosum mRNA TPT for triose phosphate translocator Length = 1567 Score = 54.0 bits (27), Expect = 1e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 6 aaagccatgactgacatggatagcaccaacgtgtatgcttacatctcaataattgctct 64 ||||| |||||||| |||||||| || ||||||||||| ||||| || || |||||||| Sbjct: 916 aaagctatgactgatatggatagtactaacgtgtatgcctacatatccatcattgctct 974
>ref|NM_001036940.1| Arabidopsis thaliana APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT); triose-phosphate transporter AT5G46110 (APE2) transcript variant AT5G46110.3 mRNA, complete cds Length = 2000 Score = 40.1 bits (20), Expect = 1.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctc 52 |||| |||||||||||||| ||||| || || || || || ||||||||||| Sbjct: 1162 ccaagaaagccatgactgatatggacagtacaaatgtctacgcttacatctc 1213
>ref|NM_180807.1| Arabidopsis thaliana APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT); antiporter/ triose-phosphate transporter AT5G46110 (APE2) transcript variant AT5G46110.1 mRNA, complete cds Length = 2048 Score = 40.1 bits (20), Expect = 1.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctc 52 |||| |||||||||||||| ||||| || || || || || ||||||||||| Sbjct: 1177 ccaagaaagccatgactgatatggacagtacaaatgtctacgcttacatctc 1228
>ref|NM_123979.2| Arabidopsis thaliana APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT); triose-phosphate transporter AT5G46110 (APE2) transcript variant AT5G46110.2 mRNA, complete cds Length = 2055 Score = 40.1 bits (20), Expect = 1.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctc 52 |||| |||||||||||||| ||||| || || || || || ||||||||||| Sbjct: 1184 ccaagaaagccatgactgatatggacagtacaaatgtctacgcttacatctc 1235
>gb|AY091414.1| Arabidopsis thaliana putative phosphate/triose-phosphate translocator precursor (At5g46110) mRNA, complete cds Length = 1264 Score = 40.1 bits (20), Expect = 1.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctc 52 |||| |||||||||||||| ||||| || || || || || ||||||||||| Sbjct: 806 ccaagaaagccatgactgatatggacagtacaaatgtctacgcttacatctc 857
>gb|AY050811.1| Arabidopsis thaliana putative phosphate/triose-phosphate translocator precursor protein (At5g46110) mRNA, complete cds Length = 1600 Score = 40.1 bits (20), Expect = 1.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctc 52 |||| |||||||||||||| ||||| || || || || || ||||||||||| Sbjct: 848 ccaagaaagccatgactgatatggacagtacaaatgtctacgcttacatctc 899
>gb|AY056790.1| Arabidopsis thaliana AT5g46110/MCL19_16 mRNA, complete cds Length = 1480 Score = 40.1 bits (20), Expect = 1.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctc 52 |||| |||||||||||||| ||||| || || || || || ||||||||||| Sbjct: 830 ccaagaaagccatgactgatatggacagtacaaatgtctacgcttacatctc 881
>gb|AY037211.1| Arabidopsis thaliana AT5g46110/MCL19_16 mRNA, complete cds Length = 1490 Score = 40.1 bits (20), Expect = 1.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctc 52 |||| |||||||||||||| ||||| || || || || || ||||||||||| Sbjct: 841 ccaagaaagccatgactgatatggacagtacaaatgtctacgcttacatctc 892
>emb|BX832228.1|CNS09ZKO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH5ZG03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1419 Score = 40.1 bits (20), Expect = 1.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctc 52 |||| |||||||||||||| ||||| || || || || || ||||||||||| Sbjct: 814 ccaagaaagccatgactgatatggacagtacaaatgtctacgcttacatctc 865
>emb|BX833081.1|CNS09Z0S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZC12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 626 Score = 40.1 bits (20), Expect = 1.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctc 52 |||| |||||||||||||| ||||| || || || || || ||||||||||| Sbjct: 15 ccaagaaagccatgactgatatggacagtacaaatgtctacgcttacatctc 66
>gb|AY087499.1| Arabidopsis thaliana clone 36058 mRNA, complete sequence Length = 1460 Score = 40.1 bits (20), Expect = 1.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctc 52 |||| |||||||||||||| ||||| || || || || || ||||||||||| Sbjct: 846 ccaagaaagccatgactgatatggacagtacaaatgtctacgcttacatctc 897
>gb|BT002683.1| Arabidopsis thaliana At5g46110/MCL19_16 gene, complete cds Length = 1233 Score = 40.1 bits (20), Expect = 1.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctc 52 |||| |||||||||||||| ||||| || || || || || ||||||||||| Sbjct: 806 ccaagaaagccatgactgatatggacagtacaaatgtctacgcttacatctc 857
>gb|AF173679.1|AF173679 Beta vulgaris phophate translocator (pt) mRNA, partial cds; nuclear gene for chloroplast product Length = 832 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 aaagccatgactgacatgga 25 |||||||||||||||||||| Sbjct: 433 aaagccatgactgacatgga 452
>emb|CT571265.12| Mouse DNA sequence from clone RP23-181D9 on chromosome 14, complete sequence Length = 206513 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 agttgtctgcataccacctgcact 88 |||||||||||||||||| ||||| Sbjct: 173893 agttgtctgcataccaccagcact 173916
>gb|AF097648.1|AF097648 Arabidopsis thaliana phosphate/triose-phosphate translocator precursor, mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1478 Score = 40.1 bits (20), Expect = 1.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctc 52 |||| |||||||||||||| ||||| || || || || || ||||||||||| Sbjct: 819 ccaagaaagccatgactgatatggacagtacaaatgtctacgcttacatctc 870
>gb|U13630.1|BOU13630 Brassica oleracea var. botrytis chloroplast phosphate/triose-phosphate translocator cTPT precursor (BOCTPT) mRNA, complete cds Length = 1498 Score = 40.1 bits (20), Expect = 1.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 1 ccaaaaaagccatgactgacatggatagcaccaacgtgtatgcttacatctc 52 |||| |||||||||||||| ||||| || || || || || ||||||||||| Sbjct: 802 ccaagaaagccatgactgatatggacagtacaaatgtctacgcttacatctc 853
>gb|BC043023.1| Mus musculus Bernardinelli-Seip congenital lipodystrophy 2 homolog (human), mRNA (cDNA clone MGC:57893 IMAGE:5689013), complete cds Length = 1577 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 48 atctcaataattgctctagttgt 70 |||||||||||||||| |||||| Sbjct: 931 atctcaataattgctccagttgt 909
>gb|AY575623.1| Aquilegia chrysantha clone D03 microsatellite sequence Length = 326 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 131 tgcaattgcaaaagtaggt 149 ||||||||||||||||||| Sbjct: 100 tgcaattgcaaaagtaggt 82
>gb|AC110816.7| Mus musculus BAC clone RP23-20P15 from chromosome 12, complete sequence Length = 216095 Score = 38.2 bits (19), Expect = 7.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 61 ctctagttgtctgcataccacctgcac 87 ||||||||| ||| ||||||||||||| Sbjct: 18366 ctctagttgcctgtataccacctgcac 18340
>ref|NM_008144.3| Mus musculus Bernardinelli-Seip congenital lipodystrophy 2 homolog (human) (Bscl2), mRNA Length = 1654 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 48 atctcaataattgctctagttgt 70 |||||||||||||||| |||||| Sbjct: 992 atctcaataattgctccagttgt 970
>ref|NM_007655.2| Mus musculus CD79A antigen (immunoglobulin-associated alpha) (Cd79a), mRNA Length = 1328 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 aaaagccatgactgacatg 23 ||||||||||||||||||| Sbjct: 665 aaaagccatgactgacatg 683
>gb|AC116480.10| Mus musculus chromosome 12, clone RP23-398M9, complete sequence Length = 194708 Score = 38.2 bits (19), Expect = 7.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 61 ctctagttgtctgcataccacctgcac 87 ||||||||| ||| ||||||||||||| Sbjct: 168167 ctctagttgcctgtataccacctgcac 168141
>emb|CR847563.12| Zebrafish DNA sequence from clone CH211-202H14 in linkage group 11, complete sequence Length = 204337 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 109 taatgcagtatggattaaa 127 ||||||||||||||||||| Sbjct: 123379 taatgcagtatggattaaa 123397
>gb|AC129217.3| Mus musculus BAC clone RP24-458M20 from chromosome 19, complete sequence Length = 175796 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 48 atctcaataattgctctagttgt 70 |||||||||||||||| |||||| Sbjct: 79296 atctcaataattgctccagttgt 79274
>gb|BC060048.1| Mus musculus Bernardinelli-Seip congenital lipodystrophy 2 homolog (human), mRNA (cDNA clone IMAGE:5685832), partial cds Length = 2835 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 48 atctcaataattgctctagttgt 70 |||||||||||||||| |||||| Sbjct: 1997 atctcaataattgctccagttgt 1975
>gb|BC061689.1| Mus musculus Bernardinelli-Seip congenital lipodystrophy 2 homolog (human), mRNA (cDNA clone MGC:67749 IMAGE:6306706), complete cds Length = 1717 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 48 atctcaataattgctctagttgt 70 |||||||||||||||| |||||| Sbjct: 1055 atctcaataattgctccagttgt 1033
>gb|AC115690.13| Mus musculus chromosome 12, clone RP24-537M9, complete sequence Length = 178140 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 aaaagccatgactgacatg 23 ||||||||||||||||||| Sbjct: 134358 aaaagccatgactgacatg 134340
>gb|U86402.1|BSU86402 Bacillus subtilis DNA polymerase I gene, complete cds Length = 2814 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 2 caaaaaagccatgactgacatgg 24 |||||||||||||| |||||||| Sbjct: 2544 caaaaaagccatgattgacatgg 2566
>gb|AC161114.4| Mus musculus BAC clone RP24-338A5 from chromosome 12, complete sequence Length = 220746 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 aaaagccatgactgacatg 23 ||||||||||||||||||| Sbjct: 15649 aaaagccatgactgacatg 15631
>emb|AL607063.14| Human DNA sequence from clone RP11-409P6 on chromosome 10, complete sequence Length = 53595 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 77 accacctgcacttattattgaag 99 |||||||| |||||||||||||| Sbjct: 18976 accacctgtacttattattgaag 18954
>emb|Z99118.2|BSUB0015 Bacillus subtilis complete genome (section 15 of 21): from 2812801 to 3013507 Length = 200707 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 caaaaaagccatgactgacatgg 24 |||||||||||||| |||||||| Sbjct: 159640 caaaaaagccatgattgacatgg 159618
>gb|AC073153.16| Mus musculus Strain C57BL6/J chromosome 19 BAC, RP23-49P8 Complete Sequence, complete sequence Length = 220143 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 48 atctcaataattgctctagttgt 70 |||||||||||||||| |||||| Sbjct: 150701 atctcaataattgctccagttgt 150723
>emb|BX908810.1| Neurospora crassa DNA linkage group IV Cosmid contig G3C5 Length = 70104 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 71 ctgcataccacctgcactt 89 ||||||||||||||||||| Sbjct: 14852 ctgcataccacctgcactt 14870
>gb|AC104308.3| Homo sapiens chromosome 3 clone RP11-544F21, complete sequence Length = 174513 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 61 ctctagttgtctgcatacc 79 ||||||||||||||||||| Sbjct: 47869 ctctagttgtctgcatacc 47851
>dbj|AK143605.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F420015N21 product:CD79A antigen (immunoglobulin-associated alpha), full insert sequence Length = 1328 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 aaaagccatgactgacatg 23 ||||||||||||||||||| Sbjct: 665 aaaagccatgactgacatg 683
>gb|AC021576.12| Homo sapiens chromosome 8, clone RP11-700M17, complete sequence Length = 166450 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 61 ctctagttgtctgcatacc 79 ||||||||||||||||||| Sbjct: 130738 ctctagttgtctgcatacc 130720
>dbj|AK151606.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830032C24 product:Bernardinelli-Seip congenital lipodystrophy 2 homolog (human), full insert sequence Length = 1373 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 48 atctcaataattgctctagttgt 70 |||||||||||||||| |||||| Sbjct: 745 atctcaataattgctccagttgt 723
>dbj|AK155753.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730216A22 product:Bernardinelli-Seip congenital lipodystrophy 2 homolog (human), full insert sequence Length = 1913 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 48 atctcaataattgctctagttgt 70 |||||||||||||||| |||||| Sbjct: 1284 atctcaataattgctccagttgt 1262
>dbj|AK158901.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530001D05 product:Bernardinelli-Seip congenital lipodystrophy 2 homolog (human), full insert sequence Length = 1796 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 48 atctcaataattgctctagttgt 70 |||||||||||||||| |||||| Sbjct: 1168 atctcaataattgctccagttgt 1146
>dbj|AK170183.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630025I02 product:Bernardinelli-Seip congenital lipodystrophy 2 homolog (human), full insert sequence Length = 1371 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 48 atctcaataattgctctagttgt 70 |||||||||||||||| |||||| Sbjct: 743 atctcaataattgctccagttgt 721
>gb|AF366456.1|AF366456 Allium cepa clone API063 maintainer line sequence Length = 1258 Score = 38.2 bits (19), Expect = 7.6 Identities = 28/31 (90%) Strand = Plus / Minus Query: 118 atggattaaacgatgcaattgcaaaagtagg 148 ||||||| || |||||||| ||||||||||| Sbjct: 1251 atggatttaaagatgcaatcgcaaaagtagg 1221
>dbj|AK004634.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched library, clone:1200007G08 product:G protein gamma 3 linked gene, full insert sequence Length = 3494 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 48 atctcaataattgctctagttgt 70 |||||||||||||||| |||||| Sbjct: 2866 atctcaataattgctccagttgt 2844
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 37 tgtatgcttacatctcaataatt 59 ||||||||||||| ||||||||| Sbjct: 886905 tgtatgcttacatttcaataatt 886927
>gb|AF069954.2|AF069954 Mus musculus Gng3lg mRNA, complete cds Length = 1654 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 48 atctcaataattgctctagttgt 70 |||||||||||||||| |||||| Sbjct: 992 atctcaataattgctccagttgt 970
>gb|BC027633.1| Mus musculus CD79A antigen (immunoglobulin-associated alpha), mRNA (cDNA clone MGC:41188 IMAGE:1332396), complete cds Length = 1008 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 aaaagccatgactgacatg 23 ||||||||||||||||||| Sbjct: 661 aaaagccatgactgacatg 679
>gb|AC125468.5| Mus musculus BAC clone RP24-113D21 from 7, complete sequence Length = 197913 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 aaaagccatgactgacatg 23 ||||||||||||||||||| Sbjct: 9776 aaaagccatgactgacatg 9794
>dbj|AP005486.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1138_B05 Length = 113982 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 37 tgtatgcttacatctcaataatt 59 ||||||||||||| ||||||||| Sbjct: 85661 tgtatgcttacatttcaataatt 85683
>gb|AF008220.1|AF008220 Bacillus subtilis rrnB-dnaB genomic region Length = 220060 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 2 caaaaaagccatgactgacatgg 24 |||||||||||||| |||||||| Sbjct: 205723 caaaaaagccatgattgacatgg 205745
>gb|AC161441.21| Mus musculus chromosome 7, clone RP24-158L15, complete sequence Length = 159403 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 aaaagccatgactgacatg 23 ||||||||||||||||||| Sbjct: 51917 aaaagccatgactgacatg 51899
>emb|AL662893.12| Mouse DNA sequence from clone RP23-202G21 on chromosome 11, complete sequence Length = 205405 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 61 ctctagttgtctgcatacc 79 ||||||||||||||||||| Sbjct: 27063 ctctagttgtctgcatacc 27081
>emb|X13450.1|MMMB1 Murine B lymphocyte lineage restricted mb-1 mRNA Length = 985 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 aaaagccatgactgacatg 23 ||||||||||||||||||| Sbjct: 662 aaaagccatgactgacatg 680
>gb|M31773.1|MUSMB1AA Murine B cell 1 (mb-1) gene, complete cds Length = 5629 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 aaaagccatgactgacatg 23 ||||||||||||||||||| Sbjct: 4749 aaaagccatgactgacatg 4767
>dbj|AB041588.1| Mus musculus brain cDNA, clone MNCb-2630, similar to Mus musculus Gng3lg mRNA Length = 2626 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 48 atctcaataattgctctagttgt 70 |||||||||||||||| |||||| Sbjct: 1967 atctcaataattgctccagttgt 1945
>dbj|AB030196.1| Mus musculus mRNA, complete cds, clone:2-37 Length = 1425 Score = 38.2 bits (19), Expect = 7.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 48 atctcaataattgctctagttgt 70 |||||||||||||||| |||||| Sbjct: 786 atctcaataattgctccagttgt 764
>dbj|AP003351.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1184D12 Length = 176854 Score = 38.2 bits (19), Expect = 7.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 61 ctctagttgtctgcatacc 79 ||||||||||||||||||| Sbjct: 150891 ctctagttgtctgcatacc 150909 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,108,810 Number of Sequences: 3902068 Number of extensions: 1108810 Number of successful extensions: 72839 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72663 Number of HSP's gapped (non-prelim): 175 length of query: 158 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 136 effective length of database: 17,147,199,772 effective search space: 2332019168992 effective search space used: 2332019168992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)