>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast|
            precursor (EC 1.4.7.1) (Fd-GOGAT)
          Length = 1616

 Score =  174 bits (442), Expect = 1e-43
 Identities = 87/97 (89%), Positives = 89/97 (91%)
 Frame = +1

Query: 13   LAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAY 192
            LAY+LDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGS KG  IL EWEAY
Sbjct: 1520 LAYILDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSEKGIAILREWEAY 1579

Query: 193  LPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQSAK 303
            LPLFWQLVPPSEEDSPEACAEFERVLA+Q T   SAK
Sbjct: 1580 LPLFWQLVPPSEEDSPEACAEFERVLAKQATTQLSAK 1616

>GLTB_SPIOL (Q43155) Ferredoxin-dependent glutamate synthase, chloroplast (EC|
            1.4.7.1) (Fd-GOGAT)
          Length = 1517

 Score =  144 bits (362), Expect = 2e-34
 Identities = 70/96 (72%), Positives = 83/96 (86%)
 Frame = +1

Query: 13   LAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAY 192
            LAY+LDEDDTL+PKVNKEIVK+QRV AP GQMQLK LIEA+VEKTGS+KGA IL +W+ Y
Sbjct: 1423 LAYILDEDDTLIPKVNKEIVKIQRVTAPVGQMQLKNLIEAHVEKTGSSKGASILKDWDKY 1482

Query: 193  LPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQSA 300
            LPLFWQLVPPSEED+PEA A FE+ +  +  ++QSA
Sbjct: 1483 LPLFWQLVPPSEEDTPEASAMFEQ-MTSEGASLQSA 1517

>GLTB1_ARATH (Q9ZNZ7) Ferredoxin-dependent glutamate synthase 1, chloroplast|
            precursor (EC 1.4.7.1) (Fd-GOGAT 1)
          Length = 1648

 Score =  140 bits (353), Expect = 2e-33
 Identities = 66/91 (72%), Positives = 79/91 (86%)
 Frame = +1

Query: 13   LAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAY 192
            LAY+LDEDDTL+PK+N+EIVK+QRV APAG++QLK LIEA+VEKTGS+KGA IL+EWE Y
Sbjct: 1554 LAYLLDEDDTLLPKINREIVKIQRVTAPAGELQLKSLIEAHVEKTGSSKGATILNEWEKY 1613

Query: 193  LPLFWQLVPPSEEDSPEACAEFERVLARQKT 285
            LPLFWQLVPPSEED+PEA A + R    + T
Sbjct: 1614 LPLFWQLVPPSEEDTPEASAAYVRTSTGEVT 1644

>GLTB2_ARATH (Q9T0P4) Ferredoxin-dependent glutamate synthase 2, chloroplast|
            precursor (EC 1.4.7.1) (Fd-GOGAT 2)
          Length = 1629

 Score =  124 bits (312), Expect = 1e-28
 Identities = 57/78 (73%), Positives = 70/78 (89%)
 Frame = +1

Query: 13   LAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAY 192
            LAY+LDED+TL+PK+NKEIVK+QRV +P GQ QLK LI+A+VEKTGS+KGA I+ EW+ Y
Sbjct: 1529 LAYILDEDNTLLPKMNKEIVKIQRVTSPVGQTQLKSLIQAHVEKTGSSKGAMIVEEWDKY 1588

Query: 193  LPLFWQLVPPSEEDSPEA 246
            L +FWQLVPPSEED+PEA
Sbjct: 1589 LAMFWQLVPPSEEDTPEA 1606

>GLTS_SYNY3 (P55038) Ferredoxin-dependent glutamate synthase 2 (EC 1.4.7.1)|
            (FD-GOGAT)
          Length = 1556

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 46/78 (58%), Positives = 54/78 (69%)
 Frame = +1

Query: 13   LAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAY 192
            LAY LDE   L  K+N EI+ +QR+ A  G+ QLK LI A+VE TGS KG  IL+ W  Y
Sbjct: 1464 LAYFLDEVGDLPEKINPEIITLQRITASKGEEQLKSLITAHVEHTGSPKGKAILANWSDY 1523

Query: 193  LPLFWQLVPPSEEDSPEA 246
            L  FWQ VPPSE+DSPEA
Sbjct: 1524 LGKFWQAVPPSEKDSPEA 1541

>GLTB_PORPU (P51375) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1538

 Score = 89.4 bits (220), Expect = 6e-18
 Identities = 43/77 (55%), Positives = 52/77 (67%)
 Frame = +1

Query: 13   LAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAY 192
            LAY LDE++  + +VN EIVK+QRV   AG+ QLK LIE +  KTGS K   IL  W  Y
Sbjct: 1449 LAYFLDEENKFIERVNSEIVKVQRVITKAGEQQLKNLIENHSAKTGSLKAHNILENWNTY 1508

Query: 193  LPLFWQLVPPSEEDSPE 243
            LP FWQ+VPPSE +  E
Sbjct: 1509 LPQFWQVVPPSEANIEE 1525

>GLTB_CYACA (O19906) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1549

 Score = 76.3 bits (186), Expect = 6e-14
 Identities = 38/77 (49%), Positives = 50/77 (64%)
 Frame = +1

Query: 13   LAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAY 192
            +AY LDE   L  KVN +IV++QRV     + QL  LIE +V KTGS K   IL +WE +
Sbjct: 1461 IAYFLDEYSNLPEKVNLDIVRIQRVVTNEARKQLIQLIEKHVLKTGSKKAVLILQQWEIF 1520

Query: 193  LPLFWQLVPPSEEDSPE 243
            +  FWQ+VPPSE ++ E
Sbjct: 1521 IHYFWQIVPPSESETSE 1537

>GLTB_ANTSP (Q06434) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1536

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 37/73 (50%), Positives = 47/73 (64%)
 Frame = +1

Query: 13   LAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAY 192
            +AY LDED+TL  K+N EIVK QR+     + QLK ++E Y  KT S K   IL  W  Y
Sbjct: 1449 IAYFLDEDNTLKNKLNTEIVKAQRLLTKESEEQLKNIMELYEIKTKSEKAKLILDNWSQY 1508

Query: 193  LPLFWQLVPPSEE 231
            L  F+Q+VPPSE+
Sbjct: 1509 LAKFYQIVPPSEQ 1521

>GLTB_AZOBR (Q05755) Glutamate synthase [NADPH] large chain precursor (EC|
            1.4.1.13) (Glutamate synthase alpha subunit)
            (NADPH-GOGAT) (GLTS alpha chain)
          Length = 1515

 Score = 55.8 bits (133), Expect = 8e-08
 Identities = 29/69 (42%), Positives = 42/69 (60%)
 Frame = +1

Query: 13   LAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAY 192
            +AY+ D DD+L   +N E V  QR+     + QLK LIE +V +T S   A+IL++W   
Sbjct: 1427 MAYVYDLDDSLPLYINDESVIFQRIEVGHYESQLKHLIEEHVTETQSRFAAEILNDWARE 1486

Query: 193  LPLFWQLVP 219
            +  FWQ+VP
Sbjct: 1487 VTKFWQVVP 1495

>GLTB_ECOLI (P09831) Glutamate synthase [NADPH] large chain precursor (EC|
            1.4.1.13) (Glutamate synthase alpha subunit)
            (NADPH-GOGAT) (GLTS alpha chain)
          Length = 1517

 Score = 50.1 bits (118), Expect = 4e-06
 Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
 Frame = +1

Query: 16   AYMLDEDDTLVPKVNKEIVKMQRVNAPA-GQMQLKGLIEAYVEKTGSTKGAKILSEWEAY 192
            AY+LDE      +VN E+V++  V+A A  +  L+GLI  +V+ TGS +G +IL+ W  +
Sbjct: 1425 AYVLDESGDFRKRVNPELVEVLSVDALAIHEEHLRGLITEHVQHTGSQRGEEILANWSTF 1484

Query: 193  LPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQ 294
               F  LV P   D         R  A  +   Q
Sbjct: 1485 ATKF-ALVKPKSSDVKALLGHRSRSAAELRVQAQ 1517

>GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.1.13)|
            (NADPH-GOGAT)
          Length = 2111

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 28/97 (28%), Positives = 47/97 (48%)
 Frame = +1

Query: 13   LAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAY 192
            +AY+ D       K+N E+V +  V   A    L+GLI+ +   TGS    +ILS++  +
Sbjct: 1483 IAYVYDMQMDFAGKINTEMVDISSVTDAAEIAFLRGLIQDHRHYTGSQVADRILSDFPRH 1542

Query: 193  LPLFWQLVPPSEEDSPEACAEFERVLARQKTAVQSAK 303
            L  F +++P           E++ VL R+    + AK
Sbjct: 1543 LSRFVKVLP----------REYKAVLEREAAKKEEAK 1569

>GLTA_BACSU (P39812) Glutamate synthase [NADPH] large chain (EC 1.4.1.13)|
            (NADPH-GOGAT)
          Length = 1520

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = +1

Query: 13   LAYMLDED-DTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEA 189
            +AY+L ED      K N E++  + +       Q+K ++E +   T S K   +L +WE 
Sbjct: 1402 IAYVLTEDVKRFKRKCNLEMILFESLEDEKEIQQIKAMLERHTAYTNSQKAEDLLDQWED 1461

Query: 190  YLPLFWQLVP 219
             +  F +++P
Sbjct: 1462 SVKKFVKVIP 1471

>DMXL1_MOUSE (Q6PNC0) Protein DmX-like 1 (X-like 1 protein)|
          Length = 3013

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +2

Query: 197  HSSGSWCHPAKKTLLKLVLSLREYLPGKKQLYNLLSDTSQS 319
            +SS S  HP KKTL + + SL + + GKK +++   D   S
Sbjct: 1267 NSSSSGLHPPKKTLTRSMTSLAQKICGKKSIFDPSVDMEDS 1307

>DAPA_PROMM (Q7V990) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)|
          Length = 302

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 22/67 (32%), Positives = 35/67 (52%)
 Frame = +1

Query: 4   GTRLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEW 183
           G++LA    +D  L+P ++   V +  V +     +LK +IEAY+    + +GA  LS  
Sbjct: 189 GSKLAVYSGDDGLLLPMLSVGAVGVVSVASHLVGRRLKAMIEAYL----NGQGALALSYH 244

Query: 184 EAYLPLF 204
           E   PLF
Sbjct: 245 EQLQPLF 251

>DAPA_PROMA (P49423) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)|
          Length = 302

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 22/67 (32%), Positives = 34/67 (50%)
 Frame = +1

Query: 4   GTRLAYMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEW 183
           G+RLA    +D  L+P ++   V +  V +    M+LK +IEAY     + + +  LS  
Sbjct: 189 GSRLAIYSGDDGLLLPMLSVGAVGVVSVASHIVGMRLKAMIEAYF----AGENSLALSHH 244

Query: 184 EAYLPLF 204
           E   PLF
Sbjct: 245 EQLQPLF 251

>POTE1_MOUSE (Q91WC1) Protection of telomeres 1 (mPot1) (POT1-like telomere|
           end-binding protein)
          Length = 640

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 540 IYRGGCLGCKTLQKNPRRNLQARFQKMPWT 451
           ++  GC  C +L+  P +NL +RF K PWT
Sbjct: 504 VHHYGCKQCSSLK--PIQNLNSRFHKGPWT 531

>ACN9_RAT (Q6TUF2) ACN9 protein homolog, mitochondrial precursor (Liver|
           regeneration-related protein LRRGT00092)
          Length = 125

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
 Frame = +1

Query: 46  VPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEK-------TGSTKGAKILSEWEAYLPLF 204
           V  + + I+++ R   P     LK L + YV+         G  +  + L EWE Y  + 
Sbjct: 9   VRSLYRRILQLHRALPP----DLKALGDQYVKDEFRRHKTVGPGEAQRFLKEWETYAAVL 64

Query: 205 WQLVPPSEEDSP-EAC 249
           WQ    S + S  +AC
Sbjct: 65  WQQAKDSRQSSSGKAC 80

>APC2_YEAST (Q12440) Anaphase-promoting complex subunit 2|
          Length = 853

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = -1

Query: 237 RVFFAGWHQLPEEWQICLPLAQ----NFSTFRAARFFNIGLNQALELHLPSWSINSLHLD 70
           R+F   ++ L E+W  CL L +     F+    + +   G+   LE   P+   +  +L+
Sbjct: 516 RLFTLKFYTLDEKWTRCLKLIREKIVKFTETSHSNYITNGILGLLETTAPAADADQSNLN 575

Query: 69  NLLVNLWD 46
           ++ V LWD
Sbjct: 576 SIDVMLWD 583

>NEUT_HUMAN (P30990) Neurotensin/neuromedin N precursor [Contains: Large|
           neuromedin N (NmN-125); Neuromedin N (NmN) (NN);
           Neurotensin (NT); Tail peptide]
          Length = 170

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 12/49 (24%), Positives = 24/49 (48%)
 Frame = -1

Query: 198 WQICLPLAQNFSTFRAARFFNIGLNQALELHLPSWSINSLHLDNLLVNL 52
           W +C    +      A    N+  ++  + H+PSW +  L++ +L+ NL
Sbjct: 20  WSLCSDSEEEMKALEADFLTNMHTSKISKAHVPSWKMTLLNVCSLVNNL 68

>DMXL1_HUMAN (Q9Y485) Protein DmX-like 1 (X-like 1 protein)|
          Length = 3027

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +2

Query: 200  SSGSWCHPAKKTLLKLVLSLREYLPGKKQLYNLLSDTSQS 319
            +S S  HP KKTL + + SL + + GKK  ++   D   S
Sbjct: 1270 NSSSGLHPPKKTLTRSMTSLAQKICGKKTAFDPSVDMEDS 1309


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,504,369
Number of Sequences: 219361
Number of extensions: 1425095
Number of successful extensions: 4147
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4146
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)