Clone Information

BLAST Search Result

Clone Name	basd20p12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS12_HORVU (Q9XHS0) 40S ribosomal protein S12	146	1e-35
2	RS12C_ARATH (Q9SKZ3) 40S ribosomal protein S12-3	108	3e-24
3	RS12A_ARATH (Q9S9P1) 40S ribosomal protein S12-1	105	3e-23
4	RS12_PIG (P46405) 40S ribosomal protein S12	86	2e-17
5	RS12_CHICK (P84175) 40S ribosomal protein S12	86	2e-17
6	RS12_XENLA (P47840) 40S ribosomal protein S12	82	2e-16
7	RS12_RAT (P63324) 40S ribosomal protein S12	82	2e-16
8	RS12_ORENI (O13019) 40S ribosomal protein S12	82	2e-16
9	RS12_MOUSE (P63323) 40S ribosomal protein S12	82	2e-16
10	RS12_CYAPA (Q9SMI3) 40S ribosomal protein S12	82	4e-16
11	RS12_DROME (P80455) 40S ribosomal protein S12	81	5e-16
12	RS12_HUMAN (P25398) 40S ribosomal protein S12	80	1e-15
13	RS12_CAEEL (P49196) 40S ribosomal protein S12	76	2e-14
14	RS12B_SCHPO (O74322) 40S ribosomal protein S12-B	75	4e-14
15	RS12A_SCHPO (O14062) 40S ribosomal protein S12-A	75	5e-14
16	RS12_ERYGR (O59936) 40S ribosomal protein S12	70	1e-12
17	RS12_PLAF7 (O97249) 40S ribosomal protein S12	62	3e-10
18	RS12_TRYBB (Q03253) 40S ribosomal protein S12	61	6e-10
19	RS12_YEAST (P48589) 40S ribosomal protein S12	49	2e-06
20	RL7A_AERPE (Q9YAX7) 50S ribosomal protein L7Ae	43	2e-04
21	RL7A_SULAC (Q4J8P1) 50S ribosomal protein L7Ae	39	0.002
22	RL7A_NANEQ (P62427) 50S ribosomal protein L7Ae	38	0.007
23	RL7A_SULTO (Q971C9) 50S ribosomal protein L7Ae	36	0.020
24	RL7A_PYRAE (Q8ZTA5) 50S ribosomal protein L7Ae	36	0.026
25	RL7A_SULSO (P55858) 50S ribosomal protein L7Ae	35	0.034
26	RL7A_ARCFU (O29494) 50S ribosomal protein L7Ae	35	0.034
27	RL7A_PYRKO (Q5JGR3) 50S ribosomal protein L7Ae	34	0.10
28	RL7A_PYRHO (P62009) 50S ribosomal protein L7Ae	33	0.13
29	RL7A_PYRFU (Q8U160) 50S ribosomal protein L7Ae	33	0.13
30	RL7A_PYRAB (P62008) 50S ribosomal protein L7Ae	33	0.13
31	NHP2_YEAST (P32495) H/ACA ribonucleoprotein complex subunit 2 (H...	33	0.13
32	NOLA2_CAEBR (Q60YI3) Putative H/ACA ribonucleoprotein complex su...	31	0.85
33	SNU13_YEAST (P39990) 13 kDa ribonucleoprotein-associated protein	31	0.85
34	RL7A_THEAC (Q9HJ56) 50S ribosomal protein L7Ae	30	1.4
35	NOLA2_CAEEL (Q9XXD4) Putative H/ACA ribonucleoprotein complex su...	30	1.4
36	LRP8_MOUSE (Q924X6) Low-density lipoprotein receptor-related pro...	30	1.4
37	EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-...	29	2.5
38	EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-...	29	2.5
39	RL7A_METKA (Q8TV03) 50S ribosomal protein L7Ae	29	2.5
40	Y018_MYCGE (P47264) Hypothetical ATP-dependent helicase MG018 (E...	29	2.5
41	EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-...	29	3.2
42	YL_DROME (P98163) Putative vitellogenin receptor precursor (Prot...	29	3.2
43	EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EX...	29	3.2
44	RL7A_THEVO (Q97BK8) 50S ribosomal protein L7Ae	29	3.2
45	EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXP...	28	4.2
46	SCC2_ASHGO (Q750S2) Sister chromatid cohesion protein 2	28	4.2
47	EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EX...	28	4.2
48	LRP8_HUMAN (Q14114) Low-density lipoprotein receptor-related pro...	28	5.5
49	SYY_RICPR (Q9ZCZ4) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosin...	28	5.5
50	NHPX_DROME (Q9U3Z7) NHP2-like protein (Hoi-polloi protein)	28	7.2
51	EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EX...	28	7.2
52	VS09_ROTGA (P18570) Glycoprotein VP7 precursor (Outer shell glyc...	28	7.2
53	EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EX...	28	7.2
54	EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EX...	28	7.2
55	EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EX...	28	7.2
56	NOLA2_ARATH (Q9LEY9) H/ACA ribonucleoprotein complex subunit 2-l...	28	7.2
57	MCPI_MELCP (P82968) Protease inhibitor (McaPI)	27	9.4
58	Y080_PYRFU (Q8U4K5) UPF0100 protein PF0080	27	9.4
59	THIC_COXBU (Q83EJ0) Thiamine biosynthesis protein thiC	27	9.4
60	ATS16_HUMAN (Q8TE57) ADAMTS-16 precursor (EC 3.4.24.-) (A disint...	27	9.4
61	VLDLR_CHICK (P98165) Very low-density lipoprotein receptor precu...	27	9.4

>RS12_HORVU (Q9XHS0) 40S ribosomal protein S12|
          Length = 143

 Score =  146 bits (369), Expect = 1e-35
 Identities = 70/85 (82%), Positives = 72/85 (84%)
 Frame = +1

Query: 109 PVLGEPMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLV 288
           P+LGEPMDLMTALQLVMKKSSAHDGLVKGL E          Q+CVLAEDCDQPDYVKLV
Sbjct: 18  PILGEPMDLMTALQLVMKKSSAHDGLVKGLREAAKSIEKHAAQLCVLAEDCDQPDYVKLV 77

Query: 289 KALCAEHNVHLVTVPSAKTXGEWXG 363
           KALCAEHNVHLVTVPSAKT GEW G
Sbjct: 78  KALCAEHNVHLVTVPSAKTLGEWAG 102

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>RS12C_ARATH (Q9SKZ3) 40S ribosomal protein S12-3|
          Length = 144

 Score =  108 bits (270), Expect = 3e-24
 Identities = 50/84 (59%), Positives = 64/84 (76%)
 Frame = +1

Query: 112 VLGEPMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVK 291
           V+ E MD+ TAL+L ++KS A+ G+V+GL E          Q+CVLAEDC+QPDYVKLVK
Sbjct: 20  VIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVK 79

Query: 292 ALCAEHNVHLVTVPSAKTXGEWXG 363
           ALCA+H++ L+TVPSAKT GEW G
Sbjct: 80  ALCADHSIKLLTVPSAKTLGEWAG 103

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>RS12A_ARATH (Q9S9P1) 40S ribosomal protein S12-1|
          Length = 144

 Score =  105 bits (262), Expect = 3e-23
 Identities = 50/81 (61%), Positives = 61/81 (75%)
 Frame = +1

Query: 121 EPMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALC 300
           E MDLMTAL+L ++K+ A+ G+V+GL E          Q+ VLAEDC+QPDYVKLVKALC
Sbjct: 23  EDMDLMTALELTLRKARAYGGVVRGLHECAKLIEKRVAQLVVLAEDCNQPDYVKLVKALC 82

Query: 301 AEHNVHLVTVPSAKTXGEWXG 363
           A+H V L+TVPSAKT GEW G
Sbjct: 83  ADHEVRLLTVPSAKTLGEWAG 103

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>RS12_PIG (P46405) 40S ribosomal protein S12|
          Length = 131

 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 40/82 (48%), Positives = 52/82 (63%)
 Frame = +1

Query: 118 GEPMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKAL 297
           G  MD+ TALQ V+K +  HDGL +G+ E           +CVLA +CD+P YVKLV+AL
Sbjct: 8   GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEAL 67

Query: 298 CAEHNVHLVTVPSAKTXGEWXG 363
           CAEH ++L+ V   K  GEW G
Sbjct: 68  CAEHQINLIKVDDNKKLGEWVG 89

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>RS12_CHICK (P84175) 40S ribosomal protein S12|
          Length = 131

 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 40/82 (48%), Positives = 52/82 (63%)
 Frame = +1

Query: 118 GEPMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKAL 297
           G  MD+ TALQ V+K +  HDGL +G+ E           +CVLA +CD+P YVKLV+AL
Sbjct: 8   GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEAL 67

Query: 298 CAEHNVHLVTVPSAKTXGEWXG 363
           CAEH ++L+ V   K  GEW G
Sbjct: 68  CAEHQINLIKVDDNKKLGEWVG 89

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>RS12_XENLA (P47840) 40S ribosomal protein S12|
          Length = 131

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 39/82 (47%), Positives = 51/82 (62%)
 Frame = +1

Query: 118 GEPMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKAL 297
           G  MD+ TALQ V+K +  HDGL +G+ E           +CVLA +CD+P YVKLV+AL
Sbjct: 8   GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEAL 67

Query: 298 CAEHNVHLVTVPSAKTXGEWXG 363
           CAE  ++L+ V   K  GEW G
Sbjct: 68  CAEPQINLIKVDDNKKLGEWVG 89

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>RS12_RAT (P63324) 40S ribosomal protein S12|
          Length = 131

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 39/82 (47%), Positives = 51/82 (62%)
 Frame = +1

Query: 118 GEPMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKAL 297
           G  MD+ TALQ V+K +  HDGL +G+ E           +CVLA +CD+P YVKLV+AL
Sbjct: 8   GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEAL 67

Query: 298 CAEHNVHLVTVPSAKTXGEWXG 363
            AEH ++L+ V   K  GEW G
Sbjct: 68  LAEHQINLIKVDDNKKLGEWVG 89

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>RS12_ORENI (O13019) 40S ribosomal protein S12|
          Length = 131

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 39/82 (47%), Positives = 50/82 (60%)
 Frame = +1

Query: 118 GEPMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKAL 297
           G  MD+ TAL  V+K +  HDGL  G+ E           +CVLA +CD+P YVKLV+AL
Sbjct: 8   GGVMDVNTALPEVLKTALIHDGLAPGIREAAKALDKRQAHLCVLAANCDEPMYVKLVEAL 67

Query: 298 CAEHNVHLVTVPSAKTXGEWXG 363
           CAEH ++L+ V   K  GEW G
Sbjct: 68  CAEHQINLIKVDDNKKLGEWVG 89

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>RS12_MOUSE (P63323) 40S ribosomal protein S12|
          Length = 131

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 39/82 (47%), Positives = 51/82 (62%)
 Frame = +1

Query: 118 GEPMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKAL 297
           G  MD+ TALQ V+K +  HDGL +G+ E           +CVLA +CD+P YVKLV+AL
Sbjct: 8   GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLVEAL 67

Query: 298 CAEHNVHLVTVPSAKTXGEWXG 363
            AEH ++L+ V   K  GEW G
Sbjct: 68  LAEHQINLIKVDDNKKLGEWVG 89

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>RS12_CYAPA (Q9SMI3) 40S ribosomal protein S12|
          Length = 136

 Score = 81.6 bits (200), Expect = 4e-16
 Identities = 38/79 (48%), Positives = 52/79 (65%)
 Frame = +1

Query: 127 MDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCAE 306
           MD+MTAL+ V+KK+   DGL +GL E          Q+CVLA + ++P Y +LV+ALCAE
Sbjct: 17  MDVMTALKEVLKKAMVVDGLKRGLHECAKALDQRSAQLCVLAANVNEPAYTRLVEALCAE 76

Query: 307 HNVHLVTVPSAKTXGEWXG 363
           H ++L+ VP  K  GEW G
Sbjct: 77  HGINLIKVPENKQLGEWVG 95

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>RS12_DROME (P80455) 40S ribosomal protein S12|
          Length = 139

 Score = 81.3 bits (199), Expect = 5e-16
 Identities = 41/85 (48%), Positives = 51/85 (60%)
 Frame = +1

Query: 109 PVLGEPMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLV 288
           PVL   MD+ TALQ V+KKS   DGLV G+ +           +C+LAE  D+P+Y KLV
Sbjct: 13  PVLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCILAESFDEPNYKKLV 72

Query: 289 KALCAEHNVHLVTVPSAKTXGEWXG 363
            ALC EH + L+ V S K  GEW G
Sbjct: 73  TALCNEHQIPLIRVDSHKKLGEWSG 97

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>RS12_HUMAN (P25398) 40S ribosomal protein S12|
          Length = 131

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 38/82 (46%), Positives = 50/82 (60%)
 Frame = +1

Query: 118 GEPMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKAL 297
           G  MD+ TALQ V+K +  HDGL +G+ E           +CV A +CD+P YVKLV+AL
Sbjct: 8   GGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLVEAL 67

Query: 298 CAEHNVHLVTVPSAKTXGEWXG 363
            AEH ++L+ V   K  GEW G
Sbjct: 68  LAEHQINLIKVDDNKKLGEWVG 89

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>RS12_CAEEL (P49196) 40S ribosomal protein S12|
          Length = 140

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 37/80 (46%), Positives = 47/80 (58%)
 Frame = +1

Query: 124 PMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCA 303
           PMD   AL+ V++ +   DGL KGL E            CVLAE+CD+P YVKLV+ LCA
Sbjct: 19  PMDKEGALRAVLRAAHHADGLAKGLHETCKALDKREAHFCVLAENCDEPQYVKLVETLCA 78

Query: 304 EHNVHLVTVPSAKTXGEWXG 363
           EH + L+ V   K  GE+ G
Sbjct: 79  EHQIPLIKVADKKIIGEYCG 98

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>RS12B_SCHPO (O74322) 40S ribosomal protein S12-B|
          Length = 148

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 35/80 (43%), Positives = 46/80 (57%)
 Frame = +1

Query: 124 PMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCA 303
           P+ +  +L+ V+K++  HDGL +G+ E           +CVL E CDQ  YVKLV+ALCA
Sbjct: 29  PLSVEDSLKEVLKRALVHDGLARGIREASKALDRRQAHLCVLCESCDQEAYVKLVEALCA 88

Query: 304 EHNVHLVTVPSAKTXGEWXG 363
           E    LV V   K  GEW G
Sbjct: 89  ESQTPLVKVADPKILGEWAG 108

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>RS12A_SCHPO (O14062) 40S ribosomal protein S12-A|
          Length = 145

 Score = 74.7 bits (182), Expect = 5e-14
 Identities = 35/81 (43%), Positives = 46/81 (56%)
 Frame = +1

Query: 121 EPMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALC 300
           E + +  AL+ V+K++  HDGL +G+ E           +CVL E CDQ  YVKLV+ALC
Sbjct: 25  ETVSVEDALKEVLKRALVHDGLARGIREASKALDRRQAHLCVLCESCDQEAYVKLVEALC 84

Query: 301 AEHNVHLVTVPSAKTXGEWXG 363
           AE    L+ V   K  GEW G
Sbjct: 85  AESETPLIKVADPKVLGEWAG 105

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>RS12_ERYGR (O59936) 40S ribosomal protein S12|
          Length = 132

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 31/79 (39%), Positives = 45/79 (56%)
 Frame = +1

Query: 127 MDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCAE 306
           M ++ AL+  ++ +  HDGL +GL E           +CVL E C++  Y KL+ ALC+E
Sbjct: 12  MTVLDALKGALRTALMHDGLARGLREASKALDRREAHMCVLNEACEEEAYKKLIVALCSE 71

Query: 307 HNVHLVTVPSAKTXGEWXG 363
           H + L+ VP  K  GEW G
Sbjct: 72  HKIPLIKVPDGKQLGEWAG 90

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>RS12_PLAF7 (O97249) 40S ribosomal protein S12|
          Length = 141

 Score = 62.0 bits (149), Expect = 3e-10
 Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
 Frame = +1

Query: 130 DLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCAEH 309
           D +TA+Q V+K +  HDGL  G+ E          ++C L++ C +P Y KL+  LCAE 
Sbjct: 20  DNVTAIQKVIKNAHVHDGLKIGIREVIKSIESQEAKVCFLSDVCSEPAYKKLITTLCAEK 79

Query: 310 NVHLVTVPS-AKTXGEWXG 363
           N+ L  V + +K  G W G
Sbjct: 80  NIPLFMVQNDSKDLGHWAG 98

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>RS12_TRYBB (Q03253) 40S ribosomal protein S12|
          Length = 143

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 28/80 (35%), Positives = 45/80 (56%)
 Frame = +1

Query: 124 PMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCA 303
           P  L  AL++V+ K+   +GL+ GL E           +CVLA+DC+  +Y KLV AL  
Sbjct: 25  PDSLEDALRIVLMKARETNGLICGLSEVTRALDRRTAHLCVLADDCEDEEYKKLVTALAK 84

Query: 304 EHNVHLVTVPSAKTXGEWXG 363
           ++N+ LV++   +   +W G
Sbjct: 85  QNNIDLVSMDEREKLAQWAG 104

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>RS12_YEAST (P48589) 40S ribosomal protein S12|
          Length = 143

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
 Frame = +1

Query: 142 ALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALC--AEHNV 315
           AL++V++ +  HDGL +GL E           + VL     + + +KLV+ L    E+ V
Sbjct: 27  ALKVVLRTALVHDGLARGLRESTKALTRGEALLVVLVSSVTEANIIKLVEGLANDPENKV 86

Query: 316 HLVTVPSAKTXGEWXG 363
            L+ V  AK  GEW G
Sbjct: 87  PLIKVADAKQLGEWAG 102

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>RL7A_AERPE (Q9YAX7) 50S ribosomal protein L7Ae|
          Length = 127

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 25/80 (31%), Positives = 35/80 (43%)
 Frame = +1

Query: 124 PMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCA 303
           P DL       +K++     + KG  E          ++ V+AED D P+ V  +  LC 
Sbjct: 12  PEDLAEKAYEAVKRARETGRIKKGTNETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCD 71

Query: 304 EHNVHLVTVPSAKTXGEWXG 363
           E  +  V VPS K  GE  G
Sbjct: 72  EKKIPYVYVPSKKRLGEAAG 91

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>RL7A_SULAC (Q4J8P1) 50S ribosomal protein L7Ae|
          Length = 126

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 23/80 (28%), Positives = 35/80 (43%)
 Frame = +1

Query: 124 PMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCA 303
           P +L   +   +KK+     + KG  E          ++ V+AED    + V  +  LC 
Sbjct: 12  PQELADKVLEAVKKAKDSGKIKKGTNETTKAVERSQAKLVVIAEDVQPEEIVAHLPLLCE 71

Query: 304 EHNVHLVTVPSAKTXGEWXG 363
           E  +  V VPS K+ GE  G
Sbjct: 72  EKKIPYVYVPSKKSLGEACG 91

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>RL7A_NANEQ (P62427) 50S ribosomal protein L7Ae|
          Length = 125

 Score = 37.7 bits (86), Expect = 0.007
 Identities = 21/80 (26%), Positives = 38/80 (47%)
 Frame = +1

Query: 124 PMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCA 303
           P +L   +  +++K+     + KG  E          ++ ++AE+ + P+ V  + ALC 
Sbjct: 13  PEELANKVYELVRKARETGKIRKGTNETTKAVERGQAKLVIIAENVNPPEIVMHLPALCE 72

Query: 304 EHNVHLVTVPSAKTXGEWXG 363
           E  V  V VPS +  G+  G
Sbjct: 73  EKGVPYVYVPSKEELGKAAG 92

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>RL7A_SULTO (Q971C9) 50S ribosomal protein L7Ae|
          Length = 126

 Score = 36.2 bits (82), Expect = 0.020
 Identities = 22/80 (27%), Positives = 33/80 (41%)
 Frame = +1

Query: 124 PMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCA 303
           P DL   +   ++K+     + KG  E          ++ V+A D    + V  +  LC 
Sbjct: 12  PEDLANKVLDAVRKAKESGKIKKGTNETTKAVERGQAKLVVIATDVQPEEIVAHLPLLCE 71

Query: 304 EHNVHLVTVPSAKTXGEWXG 363
           E  +  V VPS K  GE  G
Sbjct: 72  EKKIPYVYVPSKKALGEACG 91

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>RL7A_PYRAE (Q8ZTA5) 50S ribosomal protein L7Ae|
          Length = 151

 Score = 35.8 bits (81), Expect = 0.026
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = +1

Query: 190 KGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTXGEWXG 363
           KG  E          ++ ++AED D P+ V  +  LC E  V  V VPS +  G+  G
Sbjct: 49  KGTNETTKAVERGLAKLVLIAEDVDPPEVVAHLPLLCEEKKVPYVYVPSKEKLGKAAG 106

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>RL7A_SULSO (P55858) 50S ribosomal protein L7Ae|
          Length = 127

 Score = 35.4 bits (80), Expect = 0.034
 Identities = 21/80 (26%), Positives = 33/80 (41%)
 Frame = +1

Query: 124 PMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCA 303
           P DL   +   ++K+     + KG  E          ++ ++AED    + V  +  LC 
Sbjct: 12  PQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVIIAEDVQPEEIVAHLPLLCD 71

Query: 304 EHNVHLVTVPSAKTXGEWXG 363
           E  +  V V S K  GE  G
Sbjct: 72  EKKIPYVYVSSKKALGEACG 91

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>RL7A_ARCFU (O29494) 50S ribosomal protein L7Ae|
          Length = 119

 Score = 35.4 bits (80), Expect = 0.034
 Identities = 21/80 (26%), Positives = 32/80 (40%)
 Frame = +1

Query: 124 PMDLMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCA 303
           P D+      +++K      + KG  E          ++  +AED D P+ V  +  LC 
Sbjct: 8   PEDMQNEALSLLEKVRESGKVKKGTNETTKAVERGLAKLVYIAEDVDPPEIVAHLPLLCE 67

Query: 304 EHNVHLVTVPSAKTXGEWXG 363
           E NV  + V S    G   G
Sbjct: 68  EKNVPYIYVKSKNDLGRAVG 87

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>RL7A_PYRKO (Q5JGR3) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = +1

Query: 190 KGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTXGEWXG 363
           KG  E          ++ ++AED D  + V  +  LC E  +  V VPS K  G   G
Sbjct: 34  KGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYVYVPSKKELGAAAG 91

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>RL7A_PYRHO (P62009) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = +1

Query: 190 KGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTXGEWXG 363
           KG  E          ++ ++AED D  + V  +  LC E  +  + VPS K  G   G
Sbjct: 34  KGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAG 91

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>RL7A_PYRFU (Q8U160) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = +1

Query: 190 KGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTXGEWXG 363
           KG  E          ++ ++AED D  + V  +  LC E  +  + VPS K  G   G
Sbjct: 34  KGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAG 91

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>RL7A_PYRAB (P62008) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 17/58 (29%), Positives = 25/58 (43%)
 Frame = +1

Query: 190 KGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTXGEWXG 363
           KG  E          ++ ++AED D  + V  +  LC E  +  + VPS K  G   G
Sbjct: 34  KGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAG 91

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>NHP2_YEAST (P32495) H/ACA ribonucleoprotein complex subunit 2 (H/ACA snoRNP|
           protein NHP2) (High mobility group-like nuclear protein
           2)
          Length = 156

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 16/65 (24%), Positives = 30/65 (46%)
 Frame = +1

Query: 157 MKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCAEHNVHLVTVPS 336
           +KK+S    + +G+ E           + V+A D    D +  +  LC +H+V  + +PS
Sbjct: 47  VKKASKAKNVKRGVKEVVKALRKGEKGLVVIAGDISPADVISHIPVLCEDHSVPYIFIPS 106

Query: 337 AKTXG 351
            +  G
Sbjct: 107 KQDLG 111

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>NOLA2_CAEBR (Q60YI3) Putative H/ACA ribonucleoprotein complex subunit 2-like|
           protein
          Length = 163

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 16/68 (23%), Positives = 30/68 (44%)
 Frame = +1

Query: 148 QLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCAEHNVHLVT 327
           +L+ K ++    L +G+ +           IC+LA +    D    + A+C E  +  V 
Sbjct: 57  KLIKKAAAGEKTLREGIKDVQKELRKNEKGICILAGNVSPIDVYSHIPAICEEKEIPYVY 116

Query: 328 VPSAKTXG 351
           +PS +  G
Sbjct: 117 IPSREQLG 124

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>SNU13_YEAST (P39990) 13 kDa ribonucleoprotein-associated protein|
          Length = 126

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = +1

Query: 184 LVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTXGEWXG 363
           L KG  E          +  ++A DC+  + +  +  LC + NV  V VPS    G   G
Sbjct: 33  LKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRACG 92

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>RL7A_THEAC (Q9HJ56) 50S ribosomal protein L7Ae|
          Length = 121

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +1

Query: 142 ALQLVMKKSSAHDGLVK-GLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCAEHNVH 318
           AL LV  +SS   G VK G  E          ++ V+AED + P+ V  + +LC +  V 
Sbjct: 18  ALDLV--ESSYRTGKVKKGTNEVIKSIERGESKLVVIAEDVNPPEVVYYLPSLCEDKKVP 75

Query: 319 LVTVPSAKTXGEWXG 363
            V V      G   G
Sbjct: 76  YVYVKKKADLGSKVG 90

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>NOLA2_CAEEL (Q9XXD4) Putative H/ACA ribonucleoprotein complex subunit 2-like|
           protein
          Length = 163

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/68 (23%), Positives = 29/68 (42%)
 Frame = +1

Query: 148 QLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCAEHNVHLVT 327
           +L+ K S+    L +G+ +           IC+LA +    D    +  +C E  +  V 
Sbjct: 57  KLIKKASAGDKTLREGIKDVQKELRRNEKGICILAGNVSPIDVYSHIPGICEEKEIPYVY 116

Query: 328 VPSAKTXG 351
           +PS +  G
Sbjct: 117 IPSREQLG 124

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>LRP8_MOUSE (Q924X6) Low-density lipoprotein receptor-related protein 8|
           precursor (Apolipoprotein E receptor 2)
          Length = 996

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 5/37 (13%)
 Frame = +3

Query: 66  ECPS*GCRSSCGPNS-----GSWRAHGLDDCSAACDE 161
           ECP+   + SCGP S      SWR  G  DC    DE
Sbjct: 120 ECPAE--KLSCGPTSHKCVPASWRCDGEKDCEGGADE 154

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>EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-EXP10) (AtEx10)|
           (Ath-ExpAlpha-1.1)
          Length = 249

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = -2

Query: 114 NRNWGRNWSGN--LNWGILLGHVSSSEDRT 31
           +RNWG+NW  N  LN   L   V++S+ RT
Sbjct: 197 SRNWGQNWQSNSYLNGQALSFKVTTSDGRT 226

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>EXP15_ARATH (O80622) Alpha-expansin 15 precursor (AtEXPA15) (At-EXP15) (AtEx15)|
           (Ath-ExpAlpha-1.3)
          Length = 248

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = -2

Query: 114 NRNWGRNWSGN--LNWGILLGHVSSSEDRT 31
           +RNWG+NW  N  LN   L   V++S+ RT
Sbjct: 196 SRNWGQNWQSNNLLNGQALSFKVTASDGRT 225

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>RL7A_METKA (Q8TV03) 50S ribosomal protein L7Ae|
          Length = 123

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/58 (29%), Positives = 23/58 (39%)
 Frame = +1

Query: 190 KGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTXGEWXG 363
           KG  E           + ++AED D  + V  +  LC E  +  V VPS    G   G
Sbjct: 34  KGTNETTKAVEREEAVLVLIAEDVDPEEVVAHLPELCDEKGIPYVYVPSKDELGAAAG 91

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>Y018_MYCGE (P47264) Hypothetical ATP-dependent helicase MG018 (EC 3.6.1.-)|
          Length = 1031

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 19/67 (28%), Positives = 34/67 (50%)
 Frame = -2

Query: 291 LDKLHIIRLVAILSKHTDLSSMLXNRFCSFTXSLDKAIMST*LLHHKLQSSHQVHGLSKN 112
           L K H+  +V  +SK+TD++++L  +      +L   I S    H  L  ++Q++ L K 
Sbjct: 528 LAKYHLFEVVDTISKYTDVTNLLDEK-----TALQLKIASENQFHLSL-DNNQINNLRKY 581

Query: 111 RNWGRNW 91
           +  G  W
Sbjct: 582 QKEGVKW 588

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>EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-EXP16) (AtEx16)|
           (Ath-ExpAlpha-1.7)
          Length = 260

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
 Frame = -2

Query: 123 LSKNRNWGRNWSGNLNWGILLG-----HVSSSEDRT 31
           +S  RNWG+NW  N    +L+G      V+SS+ RT
Sbjct: 204 MSLTRNWGQNWQSN---AVLVGQSLSFRVTSSDRRT 236

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>YL_DROME (P98163) Putative vitellogenin receptor precursor (Protein yolkless)|
            (YL)
          Length = 1984

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
 Frame = +3

Query: 96   CGPNS---GSWRAHGLDDCSAACDEEVKC 173
            CG  S   GSW   G  DCS   DE  KC
Sbjct: 1165 CGSGSCIAGSWECDGRIDCSDGSDEHDKC 1193

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>EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EXP4) (AtEx4)|
           (Ath-ExpAlpha-1.6)
          Length = 257

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 123 LSKNRNWGRNWSGNLNWGILLGHVSSSEDRTEPRARRSCW 4
           +S +RNWG+NW  N    +L+G   S       R   + W
Sbjct: 201 MSLSRNWGQNWQSN---AVLVGQALSFRVTGSDRRTSTSW 237

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>RL7A_THEVO (Q97BK8) 50S ribosomal protein L7Ae|
          Length = 121

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = +1

Query: 142 ALQLVMKKSSAHDGLVK-GLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCAEHNVH 318
           AL LV  +S+   G +K G  E          ++ V+AED + P+ V  + +LC +  V 
Sbjct: 18  ALDLV--ESAFRSGKIKKGTNEVIKSIERGESKLVVIAEDVNPPEVVYYLPSLCEDKKVP 75

Query: 319 LVTVPSAKTXGEWXG 363
            V V      G   G
Sbjct: 76  YVYVKKKADLGSKVG 90

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>EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXPA14) (At-EXP14)|
           (AtEx14) (Ath-ExpAlpha-1.5)
          Length = 255

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = -2

Query: 120 SKNRNWGRNWSGN--LNWGILLGHVSSSEDRT 31
           S +RNWG+NW  N  L+   L   V++S+ RT
Sbjct: 198 SMSRNWGQNWQSNAKLDGQALSFKVTTSDGRT 229

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>SCC2_ASHGO (Q750S2) Sister chromatid cohesion protein 2|
          Length = 1479

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = -2

Query: 324 DQVNVVLSTECLDKLHII--RLVAILSKHTDLSSMLXNR 214
           D+   +LS +C+DKLHI+   +++I +  T+L   L  R
Sbjct: 204 DRATHILSEQCIDKLHIVFRNILSIPAVWTELDVSLLQR 242

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>EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EXP6) (AtEx6)|
           (Ath-ExpAlpha-1.8)
          Length = 257

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -2

Query: 123 LSKNRNWGRNWSGNLNWGILLGHVSSSEDRTEPRARRSCW 4
           ++ +RNWG+NW  N    +L+G   S    +  R   + W
Sbjct: 201 MTMSRNWGQNWQSN---SVLVGQSLSFRVTSSDRRSSTSW 237

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>LRP8_HUMAN (Q14114) Low-density lipoprotein receptor-related protein 8|
           precursor (Apolipoprotein E receptor 2)
          Length = 963

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 5/28 (17%)
 Frame = +3

Query: 93  SCGPNS-----GSWRAHGLDDCSAACDE 161
           SCGP S      SWR  G  DC    DE
Sbjct: 133 SCGPTSHKCVPASWRCDGEKDCEGGADE 160

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>SYY_RICPR (Q9ZCZ4) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA|
           ligase) (TyrRS)
          Length = 411

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
 Frame = -2

Query: 342 FGTRHGDQVNVVLSTECLDKLHIIRLVAILSKHTDLSSMLXNRFCSFTXSLDKAIMST*L 163
           FG   GD + ++ + E LD L+ +  +     +  ++ ML     S    LD++   + L
Sbjct: 111 FGKDQGDAI-ILDNAEWLDSLNYLDFLRDFGSYFSVNRMLT--MDSVKLRLDRSHHLSFL 167

Query: 162 -LHHKLQSSHQVHGLSKNRNWGRNWSGNLNWG-ILLG 58
            L++ L  S+  + LSKN N      G+  WG I++G
Sbjct: 168 ELNYMLLQSYDFYYLSKNYNCILQLGGSDQWGNIVIG 204

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>NHPX_DROME (Q9U3Z7) NHP2-like protein (Hoi-polloi protein)|
          Length = 127

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 19/77 (24%), Positives = 33/77 (42%)
 Frame = +1

Query: 133 LMTALQLVMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCAEHN 312
           L   +  +++++  ++ L KG  E           I VLA D +  + +  +  LC + N
Sbjct: 17  LTAKIMNLLQQALNYNQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKN 76

Query: 313 VHLVTVPSAKTXGEWXG 363
           V  V V S +  G   G
Sbjct: 77  VPYVFVRSKQALGRACG 93

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>EXPA8_ARATH (O22874) Alpha-expansin 8 precursor (AtEXPA8) (At-EXP8) (AtEx8)|
           (Ath-ExpAlpha-1.11)
          Length = 253

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = -2

Query: 114 NRNWGRNWSGN--LNWGILLGHVSSSEDRT 31
           +RNWG+NW  N  +N   L   V++S+ RT
Sbjct: 202 SRNWGQNWQSNSYMNDQSLSFQVTTSDGRT 231

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>VS09_ROTGA (P18570) Glycoprotein VP7 precursor (Outer shell glycoprotein)|
          Length = 249

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = -2

Query: 165 LLHHKLQSSHQVHG-LSKNRNWGRNWSGNLNWGILLGHV----SSSEDRTEPRA 19
           L +H     + V G +SK  NWG  WSG   +  +L  +     +S+   EPRA
Sbjct: 196 LNYHLFYRDYDVSGVISKQVNWGNVWSGFKTFAQVLYKILDLFFNSKRNVEPRA 249

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>EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EXP2) (AtEx2)|
           (Ath-ExpAlpha-1.12)
          Length = 255

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -2

Query: 120 SKNRNWGRNWSGN--LNWGILLGHVSSSEDRT 31
           S +RNWG+NW  N  L    L   V+ S+ RT
Sbjct: 202 SMSRNWGQNWQSNTYLRGQSLSFQVTDSDGRT 233

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>EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EXP3) (AtEx3)|
           (Ath-ExpAlpha-1.9)
          Length = 262

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 114 NRNWGRNWSGNLNWGILLGHVSSSEDRTEPRARRSCW 4
           +RNWG+NW  N    +L+G   S       R   + W
Sbjct: 209 SRNWGQNWQSN---AVLIGQSLSFRVTASDRRSSTSW 242

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>EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EXP1) (AtEx1)|
           (Ath-ExpAlpha-1.2)
          Length = 250

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -2

Query: 162 LHHKLQSSHQVHGLSKNRNWGRNWSGN--LNWGILLGHVSSSEDRT 31
           +H  +    +    + +RNWG+NW  N  LN   L   V++S+ +T
Sbjct: 182 VHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQT 227

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>NOLA2_ARATH (Q9LEY9) H/ACA ribonucleoprotein complex subunit 2-like protein|
           (Nhp2-like protein)
          Length = 156

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = +1

Query: 154 VMKKSSAHDGLVKGLXEXXXXXXXXXXQICVLAEDCDQPDYVKLVKALCAEHNVHLVTVP 333
           +++K++    L +G+ E           +CV+A +    D +  +  LC E  V  V VP
Sbjct: 41  LIQKAAGKKCLKRGVKEVVKSIRRGQKGLCVIAGNISPIDVITHLPILCEEAGVPYVYVP 100

Query: 334 S 336
           S
Sbjct: 101 S 101

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>MCPI_MELCP (P82968) Protease inhibitor (McaPI)|
          Length = 197

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 63  GECPS*GCRSSCGPNSGSWRAHGLDDCSAACDEEV 167
           GEC +   +   GP  G++R +  D  S  C+E V
Sbjct: 139 GECDACSLKKVVGPCRGAFRRYYFDSVSGKCEEFV 173

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>Y080_PYRFU (Q8U4K5) UPF0100 protein PF0080|
          Length = 345

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +1

Query: 271 DYVKLVKALCAEHNVHLVTVPSAKTXGEW 357
           DY+ + K++  +HN+  +T+PS    G++
Sbjct: 231 DYIFIYKSVAKQHNLSYITLPSEINLGDF 259

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>THIC_COXBU (Q83EJ0) Thiamine biosynthesis protein thiC|
          Length = 548

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = -2

Query: 342 FGTRHGDQVNVVLSTECLDKLHIIRLVAILSKHTDLSSMLXNRFCSFTXS 193
           F  R  DQ N+ L  E     H   L    +KH    S+   +FC++  S
Sbjct: 488 FEFRWHDQFNLALDAETARLFHDETLPKEAAKHAHFCSLCGPKFCAYKTS 537

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>ATS16_HUMAN (Q8TE57) ADAMTS-16 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 16) (ADAM-TS
            16) (ADAM-TS16)
          Length = 1224

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +3

Query: 69   CPS*GCRSSCGPNSGSWRAHGLDDCSAAC 155
            CP     ++ GP+ GSW A     C+A+C
Sbjct: 1114 CPRHPPFAAAGPSRGSWFASPWSQCTASC 1142

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>VLDLR_CHICK (P98165) Very low-density lipoprotein receptor precursor (VLDL|
           receptor) (VLDL-R) (Vitellogenin receptor) (VTG
           receptor)
          Length = 863

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 9/37 (24%)
 Frame = +3

Query: 93  SCGPNSG-----SWRAHGLDDCSAACDEE----VKCS 176
           SCGP S      SW+  G  DC +  DEE    V CS
Sbjct: 137 SCGPQSTQCIPVSWKCDGEKDCDSGEDEENCGNVTCS 173


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,828,236
Number of Sequences: 219361
Number of extensions: 659093
Number of successful extensions: 2170
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 2002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2165
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result