ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd20p06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [U... 286 1e-77
2CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic sub... 278 4e-75
3CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [U... 234 8e-62
4CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [U... 226 2e-59
5CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [U... 226 2e-59
6CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic sub... 221 7e-58
7CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [U... 218 6e-57
8CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [U... 216 2e-56
9CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [U... 214 1e-55
10CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [U... 211 1e-54
11ACSA2_ACEXY (Q59167) Cellulose synthase 2 [Includes: Cellulose s... 38 0.015
12BCSA2_ACEXY (O82859) Cellulose synthase catalytic subunit [UDP-f... 33 0.37
13BCSA1_ACEXY (P19449) Cellulose synthase catalytic subunit [UDP-f... 33 0.37
14TEKT3_MOUSE (Q6X6Z7) Tektin-3 30 2.4
15YN8S_YEAST (P53740) Hypothetical protein YNR048W 30 3.2
16DXS_WIGBR (Q8D357) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2... 30 4.1
17VL2_HPV43 (Q705H5) Minor capsid protein L2 29 5.4
18DXS_NEIMB (Q9JXV7) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2... 28 9.2
19DXS_NEIMA (Q9JW13) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2... 28 9.2
20LYTT_OCEIH (Q8EQQ3) Sensory transduction protein lytT 28 9.2

>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-1) (Radially swollen protein 1)
           (AtRSW1)
          Length = 1081

 Score =  286 bits (733), Expect = 1e-77
 Identities = 131/146 (89%), Positives = 139/146 (95%)
 Frame = +2

Query: 32  KSRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNSSKALREAMCFMMDPALGR 211
           + RPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFN+SKA++EAMCFMMDPA+G+
Sbjct: 527 EKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKAIKEAMCFMMDPAIGK 586

Query: 212 KTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGLDGIQGPMYVGTGCCFNRQALYGYDP 391
           K CYVQFPQRFDGIDLHDRYANRNIVFFDINMKGLDGIQGP+YVGTGCCFNRQALYGYDP
Sbjct: 587 KCCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGLDGIQGPVYVGTGCCFNRQALYGYDP 646

Query: 392 VLTEADLEPNIVVKSCCGGRKKKNKS 469
           VLTE DLEPNI+VKSCCG RKK   S
Sbjct: 647 VLTEEDLEPNIIVKSCCGSRKKGKSS 672



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>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10|
           [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13)
          Length = 1065

 Score =  278 bits (712), Expect = 4e-75
 Identities = 127/142 (89%), Positives = 136/142 (95%)
 Frame = +2

Query: 32  KSRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNSSKALREAMCFMMDPALGR 211
           + RPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFN+SKA++EAMCFMMDPA+G+
Sbjct: 514 EKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKAIKEAMCFMMDPAIGK 573

Query: 212 KTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGLDGIQGPMYVGTGCCFNRQALYGYDP 391
           K CYVQFPQRFDGIDLHDRYANRN VFFDIN+KGLDGIQGP+YVGTGCCFNRQALYGYDP
Sbjct: 574 KCCYVQFPQRFDGIDLHDRYANRNTVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDP 633

Query: 392 VLTEADLEPNIVVKSCCGGRKK 457
           VLTE DLEPNI+VKSC G RKK
Sbjct: 634 VLTEEDLEPNIIVKSCFGSRKK 655



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>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1
           protein 1) (Isoxaben resistant protein 1) (Ath-B)
          Length = 1065

 Score =  234 bits (597), Expect = 8e-62
 Identities = 105/146 (71%), Positives = 126/146 (86%)
 Frame = +2

Query: 32  KSRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNSSKALREAMCFMMDPALGR 211
           + RPGFQHHKKAGAMNAL+RVSAVLTNG ++LN+DCDHY N+SKALREAMCF+MDP LG+
Sbjct: 511 EKRPGFQHHKKAGAMNALVRVSAVLTNGPFILNLDCDHYINNSKALREAMCFLMDPNLGK 570

Query: 212 KTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGLDGIQGPMYVGTGCCFNRQALYGYDP 391
           + CYVQFPQRFDGID +DRYANRN VFFDIN++GLDGIQGP+YVGTGC FNR ALYGY+P
Sbjct: 571 QVCYVQFPQRFDGIDKNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEP 630

Query: 392 VLTEADLEPNIVVKSCCGGRKKKNKS 469
            +     +P+++ K C G RKK +K+
Sbjct: 631 PIKVKHKKPSLLSKLCGGSRKKNSKA 656



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>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-7) (Irregular xylem protein 3)
           (AtIRX3)
          Length = 1026

 Score =  226 bits (577), Expect = 2e-59
 Identities = 103/149 (69%), Positives = 123/149 (82%), Gaps = 2/149 (1%)
 Frame = +2

Query: 32  KSRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNSSKALREAMCFMMDPALGR 211
           + RPGFQHHKKAGAMNAL+RV+ VLTN  ++LN+DCDHY N+SKA+REAMCF+MDP +G+
Sbjct: 490 EKRPGFQHHKKAGAMNALVRVAGVLTNAPFMLNLDCDHYVNNSKAVREAMCFLMDPQIGK 549

Query: 212 KTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGLDGIQGPMYVGTGCCFNRQALYGYDP 391
           K CYVQFPQRFDGID +DRYANRN VFFDINMKGLDGIQGP+YVGTGC F RQALYGY+P
Sbjct: 550 KVCYVQFPQRFDGIDTNDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFKRQALYGYEP 609

Query: 392 VLTEADLEPNIVVKSCCG--GRKKKNKSY 472
              +    P ++   CC   GR++KNK +
Sbjct: 610 --PKGPKRPKMISCGCCPCFGRRRKNKKF 636



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>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-4) (Irregular xylem protein 5)
           (AtIRX5)
          Length = 1049

 Score =  226 bits (577), Expect = 2e-59
 Identities = 104/152 (68%), Positives = 126/152 (82%), Gaps = 6/152 (3%)
 Frame = +2

Query: 32  KSRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNSSKALREAMCFMMDPALGR 211
           + RPG+ HHKKAGAMNA++RVSAVLTN  ++LN+DCDHY N+SKA+RE+MCF+MDP LG+
Sbjct: 467 EKRPGYAHHKKAGAMNAMVRVSAVLTNAPFMLNLDCDHYINNSKAIRESMCFLMDPQLGK 526

Query: 212 KTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGLDGIQGPMYVGTGCCFNRQALYGYDP 391
           K CYVQFPQRFDGIDL+DRYANRNIVFFDINM+GLDGIQGP+YVGTGC FNR ALYGY+P
Sbjct: 527 KLCYVQFPQRFDGIDLNDRYANRNIVFFDINMRGLDGIQGPVYVGTGCVFNRPALYGYEP 586

Query: 392 VLTE------ADLEPNIVVKSCCGGRKKKNKS 469
            ++E       D  P+ +   CCGG  + +KS
Sbjct: 587 PVSEKRKKMTCDCWPSWIC-CCCGGGNRNHKS 617



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>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9|
           [UDP-forming] (EC 2.4.1.12) (AtCesA-9)
          Length = 1088

 Score =  221 bits (563), Expect = 7e-58
 Identities = 107/149 (71%), Positives = 118/149 (79%), Gaps = 6/149 (4%)
 Frame = +2

Query: 32  KSRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNSSKALREAMCFMMDPALGR 211
           + RPGF HHKKAGAMN+LIRVSAVL+N  YLLNVDCDHY N+SKA+REAMCFMMDP  G+
Sbjct: 534 EKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKAIREAMCFMMDPQSGK 593

Query: 212 KTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGLDGIQGPMYVGTGCCFNRQALYGYD- 388
           K CYVQFPQRFDGID HDRY+NRN+VFFDINMKGLDGIQGP+YVGTGC F RQALYG+D 
Sbjct: 594 KICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGFDA 653

Query: 389 -----PVLTEADLEPNIVVKSCCGGRKKK 460
                P     +  P      CCG RKKK
Sbjct: 654 PKKKQPPGRTCNCWPKWCC-LCCGMRKKK 681



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>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-2) (Ath-A)
          Length = 1084

 Score =  218 bits (555), Expect = 6e-57
 Identities = 105/148 (70%), Positives = 117/148 (79%), Gaps = 6/148 (4%)
 Frame = +2

Query: 32  KSRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNSSKALREAMCFMMDPALGR 211
           + RPGF HHKKAGAMN+LIRVSAVL+N  YLLNVDCDHY N+SKA+RE+MCFMMDP  G+
Sbjct: 529 EKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKAIRESMCFMMDPQSGK 588

Query: 212 KTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGLDGIQGPMYVGTGCCFNRQALYGYD- 388
           K CYVQFPQRFDGID HDRY+NRN+VFFDINMKGLDGIQGP+YVGTGC F RQALYG+D 
Sbjct: 589 KVCYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGFDA 648

Query: 389 -----PVLTEADLEPNIVVKSCCGGRKK 457
                P     +  P      CCG RKK
Sbjct: 649 PKKKKPPGKTCNCWPKWCC-LCCGLRKK 675



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>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2)
           (Protein PROCUSTE1) (Protein Quill) (AraxCelA)
          Length = 1084

 Score =  216 bits (551), Expect = 2e-56
 Identities = 97/119 (81%), Positives = 107/119 (89%)
 Frame = +2

Query: 32  KSRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNSSKALREAMCFMMDPALGR 211
           + RPGF HHKKAGAMN+LIRVS VL+N  YLLNVDCDHY N+SKALREAMCFMMDP  G+
Sbjct: 528 EKRPGFDHHKKAGAMNSLIRVSGVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGK 587

Query: 212 KTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGLDGIQGPMYVGTGCCFNRQALYGYD 388
           K CYVQFPQRFDGID HDRY+NRN+VFFDINMKGLDG+QGP+YVGTGC F RQALYG+D
Sbjct: 588 KICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRQALYGFD 646



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>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-5)
          Length = 1069

 Score =  214 bits (544), Expect = 1e-55
 Identities = 104/150 (69%), Positives = 117/150 (78%), Gaps = 4/150 (2%)
 Frame = +2

Query: 32  KSRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNSSKALREAMCFMMDPALGR 211
           + RPGF HHKKAGAMN+LIRVS VL+N  YLLNVDCDHY N+SKALREAMCFMMDP  G+
Sbjct: 516 EKRPGFDHHKKAGAMNSLIRVSGVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGK 575

Query: 212 KTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGLDGIQGPMYVGTGCCFNRQALYGYDP 391
           K CYVQFPQRFDGID  DRY+NRN+VFFDINMKGLDG+QGP+YVGTGC F RQALYG+D 
Sbjct: 576 KICYVQFPQRFDGIDKSDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRQALYGFDA 635

Query: 392 VLTEAD--LEPNIVVKSC--CGGRKKKNKS 469
              +    +  N   K C  C G +K  KS
Sbjct: 636 PKKKKTKRMTCNCWPKWCLFCCGLRKNRKS 665



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>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-8) (Irregular xylem protein 1)
           (AtIRX1)
          Length = 985

 Score =  211 bits (536), Expect = 1e-54
 Identities = 98/143 (68%), Positives = 116/143 (81%)
 Frame = +2

Query: 32  KSRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNSSKALREAMCFMMDPALGR 211
           + RPG+QHHKKAGA NAL+RVSAVLTN  ++LN+DCDHY N+SKA+REAMCF+MDP +G+
Sbjct: 436 EKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPVVGQ 495

Query: 212 KTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGLDGIQGPMYVGTGCCFNRQALYGYDP 391
             C+VQFPQRFDGID  DRYANRNIVFFD+NM+GLDGIQGP+YVGTG  F RQALYGY P
Sbjct: 496 DVCFVQFPQRFDGIDKSDRYANRNIVFFDVNMRGLDGIQGPVYVGTGTVFRRQALYGYSP 555

Query: 392 VLTEADLEPNIVVKSCCGGRKKK 460
             ++  + P     SCC   KKK
Sbjct: 556 P-SKPRILPQSSSSSCCCLTKKK 577



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>ACSA2_ACEXY (Q59167) Cellulose synthase 2 [Includes: Cellulose synthase|
           catalytic subunit [UDP-forming] (EC 2.4.1.12); Cyclic
           di-GMP-binding domain (Cellulose synthase 2 regulatory
           domain)]
          Length = 1596

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
 Frame = +2

Query: 53  HHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNSSKALREAMCFMMDPALGRKTCYVQF 232
           +H KAG +N  +RV    T G Y++  DCDH        +     M DP    K   +Q 
Sbjct: 211 NHAKAGNLNHALRV----TEGEYVVIFDCDHIPTRGFLKKTIGWMMADP----KLALLQT 262

Query: 233 PQRFDGIDLHDR--YANRNI-----VFFDINMKGLDGIQGPMYVGTGCCFNRQALYGYDP 391
           P  F   D   R     +N+     +F+ +   G D      + G+     R A+ G   
Sbjct: 263 PHHFYSPDPFQRNLATGQNVPPEGNMFYGLVQDGNDFWDATFFCGSCAAIRRSAVLGIGG 322

Query: 392 VLTEADLE 415
             TE   E
Sbjct: 323 FATETVTE 330



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>BCSA2_ACEXY (O82859) Cellulose synthase catalytic subunit [UDP-forming] (EC|
           2.4.1.12)
          Length = 756

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 7/114 (6%)
 Frame = +2

Query: 56  HKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNSSKALREAMCFMMDPALGRKTCYVQFP 235
           H KAG +N  I+     T+G Y+L +DCDH   +   L+ AM +M+     RK   +Q P
Sbjct: 216 HAKAGNLNHAIK----RTSGDYILILDCDH-IPTRAFLQIAMGWMV---ADRKIALMQTP 267

Query: 236 QRFDGID-------LHDRYANRNIVFFDINMKGLDGIQGPMYVGTGCCFNRQAL 376
             F   D       +  R      +F+ +   G D      + G+     R+A+
Sbjct: 268 HHFYSPDPFQRNLAVGYRTPPEGNLFYGVIQDGNDFWDATFFCGSCAILRREAI 321



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>BCSA1_ACEXY (P19449) Cellulose synthase catalytic subunit [UDP-forming] (EC|
           2.4.1.12)
          Length = 754

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 7/114 (6%)
 Frame = +2

Query: 56  HKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNSSKALREAMCFMMDPALGRKTCYVQFP 235
           H KAG +N  I+     T+G Y+L +DCDH   +   L+ AM +M+     RK   +Q P
Sbjct: 214 HAKAGNLNHAIK----RTSGDYILILDCDH-IPTRAFLQIAMGWMV---ADRKIALMQTP 265

Query: 236 QRFDGID-------LHDRYANRNIVFFDINMKGLDGIQGPMYVGTGCCFNRQAL 376
             F   D       +  R      +F+ +   G D      + G+     R+A+
Sbjct: 266 HHFYSPDPFQRNLAVGYRTPPEGNLFYGVIQDGNDFWDATFFCGSCAILRREAI 319



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>TEKT3_MOUSE (Q6X6Z7) Tektin-3|
          Length = 490

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = +2

Query: 308 KGLDGIQGPMYVGTGCCFNRQALYGYDPVLTEADLEPNIVVKS--CCGGRKKKN 463
           +GL   +GP+ V   C F+R+   G D V  EA+ E    V +  CC  R +++
Sbjct: 183 RGLIETEGPLQVSRECLFHREKRMGIDLVHDEAEKELLAEVDTILCCQERMRQH 236



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>YN8S_YEAST (P53740) Hypothetical protein YNR048W|
          Length = 393

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 140 DHYFNSSKALREAMCFMMDPALGRKTCYVQF 232
           D++F+   A++     + DP LG +TC +QF
Sbjct: 100 DYHFSKKVAVQPQWMVLTDPELGNQTCRIQF 130



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>DXS_WIGBR (Q8D357) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)|
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS)
          Length = 626

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
 Frame = +2

Query: 83  LIRVSAVLTNGAYLLNVDC---DHYFNSSKALREAMCFMMDPALGRK----TCYVQFPQR 241
           LI ++  +  G+ L+N      + YF+ + A + A+ F    A+G        Y  F QR
Sbjct: 343 LIAITPAMREGSGLVNFSKMYPNQYFDVAIAEQHAVTFAAGLAIGGYKPIVAIYSTFLQR 402

Query: 242 FDGIDLHDRYANRNIVFFDINMKGLDGIQGPMYVG 346
                +HD    +  V F I+  G+ G  GP + G
Sbjct: 403 AYDQIIHDIAIQKLPVLFAIDRAGIVGPDGPTHQG 437



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>VL2_HPV43 (Q705H5) Minor capsid protein L2|
          Length = 463

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 24/90 (26%), Positives = 36/90 (40%)
 Frame = +2

Query: 35  SRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNSSKALREAMCFMMDPALGRK 214
           SR G     + GA   +   S +   G         H+F    ++       + P LGR 
Sbjct: 293 SRRGIVRFSRVGARGTMYTRSGIRIGGRV-------HFFTDISSIPTEESIELQP-LGRS 344

Query: 215 TCYVQFPQRFDGIDLHDRYANRNIVFFDIN 304
                FP   D  DL+D YA+ N++  DI+
Sbjct: 345 Q---SFPTVSDTSDLYDIYADENLLNNDIS 371



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>DXS_NEIMB (Q9JXV7) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)|
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS)
          Length = 637

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
 Frame = +2

Query: 62  KAGAMNALIRVSAVLTNGAYLLNVDC---DHYFNSSKALREAMCFMMDPAL-GRK---TC 220
           +A A + L+ ++  +  G+ L+  +    D YF+   A + A+ F    A  G K     
Sbjct: 343 RAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLACEGMKPVVAI 402

Query: 221 YVQFPQRFDGIDLHDRYANRNIVFFDINMKGLDGIQGPMYVG 346
           Y  F QR     +HD       V F ++  G+ G  GP + G
Sbjct: 403 YSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAG 444



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>DXS_NEIMA (Q9JW13) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)|
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS)
          Length = 637

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
 Frame = +2

Query: 62  KAGAMNALIRVSAVLTNGAYLLNVDC---DHYFNSSKALREAMCFMMDPAL-GRK---TC 220
           +A A + L+ ++  +  G+ L+  +    D YF+   A + A+ F    A  G K     
Sbjct: 343 RAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLACEGMKPVVAI 402

Query: 221 YVQFPQRFDGIDLHDRYANRNIVFFDINMKGLDGIQGPMYVG 346
           Y  F QR     +HD       V F ++  G+ G  GP + G
Sbjct: 403 YSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAG 444



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>LYTT_OCEIH (Q8EQQ3) Sensory transduction protein lytT|
          Length = 246

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = +2

Query: 251 IDLHDRYANRNIVFFDINMKGLDGIQ 328
           ++L+  Y N N++F DI+M G++GI+
Sbjct: 41  LNLYQEY-NPNVIFLDIHMPGINGIE 65


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,360,954
Number of Sequences: 219361
Number of extensions: 1186892
Number of successful extensions: 3033
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3032
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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