ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd21e04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY108591.1| Zea mays PCO125156 mRNA sequence 254 3e-64
2dbj|AK061903.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 1e-57
3dbj|AK121333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 1e-57
4dbj|AK065547.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 1e-57
5ref|XM_479479.1| Oryza sativa (japonica cultivar-group), mRNA 98 4e-17
6gb|AY649841.1| Zea mays ASF/SF2-like pre-mRNA splicing factor SR... 98 4e-17
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 98 4e-17
8gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome... 98 4e-17
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
10dbj|AK106176.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 4e-17
11dbj|AK072839.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 4e-17
12gb|DQ019639.1| Triticum aestivum alternative splicing regulator ... 76 1e-10
13gb|BT013695.1| Lycopersicon esculentum clone 132536R, mRNA sequence 58 3e-05
14ref|NM_100783.3| Arabidopsis thaliana ATSRP30.1; RNA binding AT1... 56 1e-04
15ref|NM_148447.2| Arabidopsis thaliana ATSRP30.1; RNA binding AT1... 56 1e-04
16gb|DQ200373.1| Solanum tuberosum clone 059F05 pre-mRNA splicing ... 56 1e-04
17gb|AY150486.1| Arabidopsis thaliana putative SF2/ASF splicing mo... 56 1e-04
18gb|AY050912.1| Arabidopsis thaliana putative SF2/ASF splicing mo... 56 1e-04
19emb|BX816682.1|CNS0AD6Q Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
20emb|BX815693.1|CNS0AAVQ Arabidopsis thaliana Full-length cDNA Co... 56 1e-04
21gb|BT013343.1| Lycopersicon esculentum clone 135171R, mRNA sequence 52 0.002
22gb|BT012710.1| Lycopersicon esculentum clone 113590R, mRNA sequence 52 0.002
23dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
24dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
25dbj|AP006269.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
26dbj|AP006409.1| Lotus japonicus genomic DNA, chromosome 5, clone... 48 0.031
27ref|NM_116476.3| Arabidopsis thaliana RNA binding / nucleic acid... 46 0.12
28ref|NM_179206.1| Arabidopsis thaliana RNA binding / nucleic acid... 46 0.12
29gb|AY056185.1| Arabidopsis thaliana At4g02430 mRNA sequence 46 0.12
30emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, c... 46 0.12
31gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sa... 46 0.12
32emb|BX828050.1|CNS0A30C Arabidopsis thaliana Full-length cDNA Co... 46 0.12
33emb|BX827158.1|CNS0A2S3 Arabidopsis thaliana Full-length cDNA Co... 46 0.12
34gb|AF069298.1|T14P8 Arabidopsis thaliana BAC T14P8 46 0.12
35dbj|AK118074.1| Arabidopsis thaliana At4g02430 mRNA for unknown ... 46 0.12
36gb|AC146389.3| Pan troglodytes BAC clone RP43-143J12 from 7, com... 44 0.48
37gb|AC145994.2| Pan troglodytes BAC clone RP43-13J21 from 7, comp... 44 0.48
38ref|XM_962170.1| PREDICTED: Tribolium castaneum similar to CG698... 44 0.48
39gb|AC083870.2|AC083870 Homo sapiens chromosome 7 clone RP11-248K... 44 0.48
40emb|AL671913.10| Mouse DNA sequence from clone RP23-136P3 on chr... 44 0.48
41gb|AC150654.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
42gb|AC140724.4| Mus musculus chromosome 8, clone RP24-291N1, comp... 42 1.9
43gb|AC109646.6| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
44gb|AC134323.3| Mus musculus BAC clone RP24-512P7 from chromosome... 42 1.9
45emb|AL645907.9| Mouse DNA sequence from clone RP23-9N7 on chromo... 42 1.9
46dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
47gb|AC107218.4| Homo sapiens BAC clone RP11-561A13 from 2, comple... 42 1.9
48ref|XM_226742.3| PREDICTED: Rattus norvegicus baculoviral IAP re... 42 1.9
49gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
50ref|XM_633915.1| Dictyostelium discoideum hypothetical protein (... 40 7.5
51gb|BC059733.1| Mus musculus protamine 1, mRNA (cDNA clone MGC:74... 40 7.5
52gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 7.5
53ref|XM_799269.1| Trypanosoma cruzi strain CL Brener hexose trans... 40 7.5
54ref|XM_802916.1| Trypanosoma cruzi strain CL Brener hexose trans... 40 7.5
55ref|XM_809728.1| Trypanosoma cruzi strain CL Brener hexose trans... 40 7.5
56ref|XM_797240.1| Trypanosoma cruzi strain CL Brener glucose tran... 40 7.5
57gb|AC136288.23| Medicago truncatula clone mth2-13o7, complete se... 40 7.5
58emb|Z46939.1|BTPRMTNP2 R.norvegicus PRM1, PRM2, PRM3 and TNP2 genes 40 7.5
59gb|AC119566.11| Homo sapiens 12 BAC RP11-41H6 (Roswell Park Canc... 40 7.5
60gb|AC096639.2| Homo sapiens chromosome 1 clone RP11-323I1, compl... 40 7.5
61gb|AC134522.9| Medicago truncatula clone mth2-12g4, complete seq... 40 7.5
62gb|AC099054.2| Homo sapiens chromosome 3 clone RP11-489C3, compl... 40 7.5
63gb|AC080009.13| Homo sapiens 3q BAC RP11-460M17 (Roswell Park Ca... 40 7.5
64gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold 40 7.5
65dbj|AK018980.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 7.5
66dbj|AK007068.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 7.5
67gb|AC073288.27| Homo sapiens 3 BAC RP11-543D10 (Roswell Park Can... 40 7.5
68gb|AC073573.27| Homo sapiens 12 BAC RP11-1136G11 (Roswell Park C... 40 7.5
69gb|AC093927.3| Homo sapiens chromosome 3 clone RP11-81I24, compl... 40 7.5
70dbj|BS000062.1| Pan troglodytes chromosome 22 clone:PTB-045C17, ... 40 7.5
71gb|AY107576.1| Zea mays PCO119766 mRNA sequence 40 7.5
72emb|CT573504.2| Medicago truncatula chromosome 5 clone mth2-178o... 40 7.5
73dbj|AP001679.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 7.5
74gb|AC109163.16| Mus musculus chromosome 8, clone RP24-174F12, co... 40 7.5
75ref|NM_013637.4| Mus musculus protamine 1 (Prm1), mRNA 40 7.5
76ref|NM_001002850.1| Rattus norvegicus protamine 1 (mapped) (Prm1... 40 7.5
77emb|CT033765.2| Medicago truncatula chromosome 5 clone mth2-105d... 40 7.5
78emb|CT010583.8| Mouse DNA sequence from clone RP23-203B24 on chr... 40 7.5
79emb|X14003.1|MMPROT1R Mouse protamine 1 mRNA 40 7.5
80emb|X07625.1|MMPROT1 Mouse protamine 1 gene 40 7.5
81gb|M83729.1|RATEXONS Rat exons 1-2 40 7.5
82emb|Z47352.1|MMPRMGNS M.musculus PRM1, PRM2, PRM3 and TNP1 genes 40 7.5
83gb|AC121107.19| Mus musculus chromosome 1, clone RP24-240P15, co... 40 7.5
84gb|DQ082992.1| Mus musculus protamin 1 antisense RNA (Prm1) gene... 40 7.5
85gb|DQ072382.1| Mus musculus A-Prm(1-2)-c antisense RNA, complete... 40 7.5
86gb|DQ072381.1| Mus musculus A-Prm(1-2)-b antisense RNA, complete... 40 7.5
87gb|DQ072380.1| Mus musculus A-Prm(1-2)-a antisense RNA, complete... 40 7.5
88gb|M27500.1|MUSPROT Mus musculus protamine mRNA, complete cds 40 7.5
89gb|K02926.1|MUSPRO1S Mouse protamine 1 mRNA, complete cds 40 7.5
90gb|U05588.1|TCU05588 Trypanosoma cruzi CL hexose transporter gen... 40 7.5
91dbj|AP001251.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 7.5 
>gb|AY108591.1| Zea mays PCO125156 mRNA sequence
          Length = 1255

 Score =  254 bits (128), Expect = 3e-64
 Identities = 292/346 (84%), Gaps = 3/346 (0%)
 Strand = Plus / Plus

                                                                       
Query: 13  gaaggcggcggcaccatagggattgctgactacacaaactatgatgatatgaaatatgct 72
           |||||||| |||||| |||| ||||  ||||||||||| |||||||||||||||||||||
Sbjct: 561 gaaggcggtggcaccgtaggaattgtggactacacaaattatgatgatatgaaatatgct 620

                                                                       
Query: 73  ataaagaaactggatgacactgaatttaagaatgcattttctaaaggttatataagggtg 132
           |||||||| |||||||| |||||||| | ||| || |||     ||  ||||||||||||
Sbjct: 621 ataaagaagctggatgatactgaattcaggaacgcctttgggcgagcctatataagggtg 680

                                                                       
Query: 133 aaggaatacgatggcaaacgtgggcgctcctactcacgtagccggagcccaagtcgtagc 192
           ||||||||  | ||||||||||| |||||||||||||||||||| |||||||||||||| 
Sbjct: 681 aaggaatataacggcaaacgtggtcgctcctactcacgtagccgaagcccaagtcgtagt 740

                                                                       
Query: 193 cgcagcaaaagcaggagcccaagtaaatctcccagggctcgc---tcagcatctaggtcc 249
             ||||||||||||||| || |||||||| |||||| |||||   ||| ||||||| |||
Sbjct: 741 tacagcaaaagcaggagtccgagtaaatcacccaggactcgccgttcatcatctagatcc 800

                                                                       
Query: 250 agatcaaggtctctttcttcccgttctcggtcagcatcgaaaggacgttttccgtcaaga 309
            | ||||| ||| ||||||| |||||  ||||  |||| |||||||||| ||| ||||||
Sbjct: 801 cggtcaagatctgtttcttctcgttcaaggtccccatcaaaaggacgttctccatcaaga 860

                                                         
Query: 310 tcaccagcaagatccaaatccccaattgcttctccagcaaacggtg 355
           |||||||||||||| ||||| || | || |||||||||||| ||||
Sbjct: 861 tcaccagcaagatcgaaatctcctaatgtttctccagcaaatggtg 906



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 373 gcaagcccaaagaagcacagtccaagcaggagcccatct 411
           |||||||| |||||||| || |||| |||||||||||||
Sbjct: 912 gcaagccccaagaagcagagcccaaacaggagcccatct 950
to top
>dbj|AK061903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-H07, full
           insert sequence
          Length = 1238

 Score =  232 bits (117), Expect = 1e-57
 Identities = 186/209 (88%)
 Strand = Plus / Plus

                                                                       
Query: 16  ggcggcggcaccatagggattgctgactacacaaactatgatgatatgaaatatgctata 75
           |||||||| ||  |||||||||  |||||||||||||||||||| |||||||||||||||
Sbjct: 523 ggcggcggtactgtagggattgtggactacacaaactatgatgacatgaaatatgctata 582

                                                                       
Query: 76  aagaaactggatgacactgaatttaagaatgcattttctaaaggttatataagggtgaag 135
           |||||||| ||||||| |||||| | |||||| |||||||||||| | ||||||||||||
Sbjct: 583 aagaaacttgatgacagtgaattcaggaatgccttttctaaaggtcacataagggtgaag 642

                                                                       
Query: 136 gaatacgatggcaaacgtgggcgctcctactcacgtagccggagcccaagtcgtagccgc 195
           ||||| |||||||| || |  |||||||| ||||||||||| ||||||||||||||||| 
Sbjct: 643 gaatatgatggcaagcgcgcccgctcctattcacgtagccgaagcccaagtcgtagccga 702

                                        
Query: 196 agcaaaagcaggagcccaagtaaatctcc 224
           |||||||||||||| | ||||||||||||
Sbjct: 703 agcaaaagcaggagtctaagtaaatctcc 731



 Score =  121 bits (61), Expect = 3e-24
 Identities = 94/105 (89%)
 Strand = Plus / Plus

                                                                       
Query: 251 gatcaaggtctctttcttcccgttctcggtcagcatcgaaaggacgttttccgtcaagat 310
           ||||||||||| ||||||||||||| ||||||||||| ||||| || | ||| |||||||
Sbjct: 767 gatcaaggtctgtttcttcccgttcacggtcagcatcaaaagggcgctctccatcaagat 826

                                                        
Query: 311 caccagcaagatccaaatccccaattgcttctccagcaaacggtg 355
           ||||||||||||||||||| |||| ||||||||| ||||| ||||
Sbjct: 827 caccagcaagatccaaatctccaaatgcttctcctgcaaatggtg 871



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 51/55 (92%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                  
Query: 394 ccaagcaggagcccatctcgttcacggtcaccctgaagtgaaatctgaatagaag 448
           |||||||||||||||||||||||||||||  ||||| | ||||||||||||||||
Sbjct: 898 ccaagcaggagcccatctcgttcacggtc-tcctgatgcgaaatctgaatagaag 951
to top
>dbj|AK121333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119J07, full
           insert sequence
          Length = 3430

 Score =  232 bits (117), Expect = 1e-57
 Identities = 186/209 (88%)
 Strand = Plus / Plus

                                                                       
Query: 16  ggcggcggcaccatagggattgctgactacacaaactatgatgatatgaaatatgctata 75
           |||||||| ||  |||||||||  |||||||||||||||||||| |||||||||||||||
Sbjct: 553 ggcggcggtactgtagggattgtggactacacaaactatgatgacatgaaatatgctata 612

                                                                       
Query: 76  aagaaactggatgacactgaatttaagaatgcattttctaaaggttatataagggtgaag 135
           |||||||| ||||||| |||||| | |||||| |||||||||||| | ||||||||||||
Sbjct: 613 aagaaacttgatgacagtgaattcaggaatgccttttctaaaggtcacataagggtgaag 672

                                                                       
Query: 136 gaatacgatggcaaacgtgggcgctcctactcacgtagccggagcccaagtcgtagccgc 195
           ||||| |||||||| || |  |||||||| ||||||||||| ||||||||||||||||| 
Sbjct: 673 gaatatgatggcaagcgcgcccgctcctattcacgtagccgaagcccaagtcgtagccga 732

                                        
Query: 196 agcaaaagcaggagcccaagtaaatctcc 224
           |||||||||||||| | ||||||||||||
Sbjct: 733 agcaaaagcaggagtctaagtaaatctcc 761



 Score =  121 bits (61), Expect = 3e-24
 Identities = 94/105 (89%)
 Strand = Plus / Plus

                                                                       
Query: 251 gatcaaggtctctttcttcccgttctcggtcagcatcgaaaggacgttttccgtcaagat 310
           ||||||||||| ||||||||||||| ||||||||||| ||||| || | ||| |||||||
Sbjct: 797 gatcaaggtctgtttcttcccgttcacggtcagcatcaaaagggcgctctccatcaagat 856

                                                        
Query: 311 caccagcaagatccaaatccccaattgcttctccagcaaacggtg 355
           ||||||||||||||||||| |||| ||||||||| ||||| ||||
Sbjct: 857 caccagcaagatccaaatctccaaatgcttctcctgcaaatggtg 901



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 51/55 (92%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                  
Query: 394 ccaagcaggagcccatctcgttcacggtcaccctgaagtgaaatctgaatagaag 448
           |||||||||||||||||||||||||||||  ||||| | ||||||||||||||||
Sbjct: 928 ccaagcaggagcccatctcgttcacggtc-tcctgatgcgaaatctgaatagaag 981
to top
>dbj|AK065547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034E09, full
           insert sequence
          Length = 1501

 Score =  232 bits (117), Expect = 1e-57
 Identities = 186/209 (88%)
 Strand = Plus / Plus

                                                                       
Query: 16  ggcggcggcaccatagggattgctgactacacaaactatgatgatatgaaatatgctata 75
           |||||||| ||  |||||||||  |||||||||||||||||||| |||||||||||||||
Sbjct: 588 ggcggcggtactgtagggattgtggactacacaaactatgatgacatgaaatatgctata 647

                                                                       
Query: 76  aagaaactggatgacactgaatttaagaatgcattttctaaaggttatataagggtgaag 135
           |||||||| ||||||| |||||| | |||||| |||||||||||| | ||||||||||||
Sbjct: 648 aagaaacttgatgacagtgaattcaggaatgccttttctaaaggtcacataagggtgaag 707

                                                                       
Query: 136 gaatacgatggcaaacgtgggcgctcctactcacgtagccggagcccaagtcgtagccgc 195
           ||||| |||||||| || |  |||||||| ||||||||||| ||||||||||||||||| 
Sbjct: 708 gaatatgatggcaagcgcgcccgctcctattcacgtagccgaagcccaagtcgtagccga 767

                                        
Query: 196 agcaaaagcaggagcccaagtaaatctcc 224
           |||||||||||||| | ||||||||||||
Sbjct: 768 agcaaaagcaggagtctaagtaaatctcc 796



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 51/55 (92%), Gaps = 1/55 (1%)
 Strand = Plus / Plus

                                                                   
Query: 394  ccaagcaggagcccatctcgttcacggtcaccctgaagtgaaatctgaatagaag 448
            |||||||||||||||||||||||||||||  ||||| | ||||||||||||||||
Sbjct: 1180 ccaagcaggagcccatctcgttcacggtc-tcctgatgcgaaatctgaatagaag 1233



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                             
Query: 307  agatcaccagcaagatccaaatccccaattgcttctccagcaaacggtg 355
            ||||||||||||||||||||||| |||| ||||||||| ||||| ||||
Sbjct: 1105 agatcaccagcaagatccaaatctccaaatgcttctcctgcaaatggtg 1153



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 251 gatcaaggtctctttcttcccgttctcggtcagcatcgaaagg 293
           ||||||||||| ||||||||||||| ||||||||||| |||||
Sbjct: 832 gatcaaggtctgtttcttcccgttcacggtcagcatcaaaagg 874
to top
>ref|XM_479479.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1089

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 124/149 (83%)
 Strand = Plus / Plus

                                                                       
Query: 40  gactacacaaactatgatgatatgaaatatgctataaagaaactggatgacactgaattt 99
           |||||||||||||||||||| ||||| |||||||| | |||||| |||||  ||||||||
Sbjct: 649 gactacacaaactatgatgacatgaagtatgctatcaggaaacttgatgattctgaattt 708

                                                                       
Query: 100 aagaatgcattttctaaaggttatataagggtgaaggaatacgatggcaaacgtgggcgc 159
           |||||||| || || || |  ||||||||||||||||| || ||||| || ||  | || 
Sbjct: 709 aagaatgccttctcaaaggcctatataagggtgaaggagtatgatggaaagcgcagccgt 768

                                        
Query: 160 tcctactcacgtagccggagcccaagtcg 188
           || |||||||| ||||| |||| ||||||
Sbjct: 769 tcatactcacgaagccgaagccgaagtcg 797



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 304 tcaagatcaccagcaagatc 323
           ||||||||||||||||||||
Sbjct: 931 tcaagatcaccagcaagatc 950
to top
>gb|AY649841.1| Zea mays ASF/SF2-like pre-mRNA splicing factor SRP32 (srp32) gene,
            complete cds, alternatively spliced
          Length = 4735

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Plus

                                                                        
Query: 129  ggtgaaggaatacgatggcaaacgtgggcgctcctactcacgtagccggagcccaagtcg 188
            ||||||||||||  | ||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 2988 ggtgaaggaatataacggcaaacgtggtcgctcctactcacgtagccgaagcccaagtcg 3047

                                 
Query: 189  tagccgcagcaaaagcaggag 209
            |||   |||||||||||||||
Sbjct: 3048 tagttacagcaaaagcaggag 3068



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                               
Query: 22   ggcaccatagggattgctgactacacaaactatgatgatatgaaatatgct 72
            |||||| |||| ||||  ||||||||||| |||||||||||||||||||||
Sbjct: 2573 ggcaccgtaggaattgtggactacacaaattatgatgatatgaaatatgct 2623



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 373  gcaagcccaaagaagcacagtccaagcaggagcccatct 411
            |||||||| |||||||| || |||| |||||||||||||
Sbjct: 4353 gcaagccccaagaagcagagcccaaacaggagcccatct 4391
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Plus

                                                                            
Query: 129      ggtgaaggaatacgatggcaaacgtgggcgctcctactcacgtagccggagcccaagtcg 188
                |||||||||||| |||||||| || |  |||||||| ||||||||||| |||||||||||
Sbjct: 12791835 ggtgaaggaatatgatggcaagcgcgcccgctcctattcacgtagccgaagcccaagtcg 12791894

                                     
Query: 189      tagccgcagcaaaagcaggag 209
                |||||| ||||||||||||||
Sbjct: 12791895 tagccgaagcaaaagcaggag 12791915



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                            
Query: 29       tagggattgctgactacacaaactatgatgatatgaaatatgct 72
                |||||||||  |||||||||||||||||||| ||||||||||||
Sbjct: 12791436 tagggattgtggactacacaaactatgatgacatgaaatatgct 12791479



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                           
Query: 251      gatcaaggtctctttcttcccgttctcggtcagcatcgaaagg 293
                ||||||||||| ||||||||||||| ||||||||||| |||||
Sbjct: 12792039 gatcaaggtctgtttcttcccgttcacggtcagcatcaaaagg 12792081



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                           
Query: 73       ataaagaaactggatgacactgaatttaagaatgcattttctaaaggttatataagggt 131
                ||||||||||| ||||||| |||||| | |||||| |||||||||||| | ||||||||
Sbjct: 12791696 ataaagaaacttgatgacagtgaattcaggaatgccttttctaaaggtcacataagggt 12791754



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                             
Query: 394      ccaagcaggagcccatctcgttcacggtc 422
                |||||||||||||||||||||||||||||
Sbjct: 12793325 ccaagcaggagcccatctcgttcacggtc 12793353



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                    
Query: 307      agatcaccagcaagatccaaatccccaattgcttct 342
                ||||||||||||||||||||||| |||| |||||||
Sbjct: 12793158 agatcaccagcaagatccaaatctccaaatgcttct 12793193
to top
>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06,
             complete sequence
          Length = 132243

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Plus

                                                                         
Query: 129   ggtgaaggaatacgatggcaaacgtgggcgctcctactcacgtagccggagcccaagtcg 188
             |||||||||||| |||||||| || |  |||||||| ||||||||||| |||||||||||
Sbjct: 30051 ggtgaaggaatatgatggcaagcgcgcccgctcctattcacgtagccgaagcccaagtcg 30110

                                  
Query: 189   tagccgcagcaaaagcaggag 209
             |||||| ||||||||||||||
Sbjct: 30111 tagccgaagcaaaagcaggag 30131



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                         
Query: 29    tagggattgctgactacacaaactatgatgatatgaaatatgct 72
             |||||||||  |||||||||||||||||||| ||||||||||||
Sbjct: 29652 tagggattgtggactacacaaactatgatgacatgaaatatgct 29695



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                        
Query: 251   gatcaaggtctctttcttcccgttctcggtcagcatcgaaagg 293
             ||||||||||| ||||||||||||| ||||||||||| |||||
Sbjct: 30255 gatcaaggtctgtttcttcccgttcacggtcagcatcaaaagg 30297



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                        
Query: 73    ataaagaaactggatgacactgaatttaagaatgcattttctaaaggttatataagggt 131
             ||||||||||| ||||||| |||||| | |||||| |||||||||||| | ||||||||
Sbjct: 29912 ataaagaaacttgatgacagtgaattcaggaatgccttttctaaaggtcacataagggt 29970



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                          
Query: 394   ccaagcaggagcccatctcgttcacggtc 422
             |||||||||||||||||||||||||||||
Sbjct: 31541 ccaagcaggagcccatctcgttcacggtc 31569



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 307   agatcaccagcaagatccaaatccccaattgcttct 342
             ||||||||||||||||||||||| |||| |||||||
Sbjct: 31374 agatcaccagcaagatccaaatctccaaatgcttct 31409
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Plus

                                                                            
Query: 129      ggtgaaggaatacgatggcaaacgtgggcgctcctactcacgtagccggagcccaagtcg 188
                |||||||||||| |||||||| || |  |||||||| ||||||||||| |||||||||||
Sbjct: 12788598 ggtgaaggaatatgatggcaagcgcgcccgctcctattcacgtagccgaagcccaagtcg 12788657

                                     
Query: 189      tagccgcagcaaaagcaggag 209
                |||||| ||||||||||||||
Sbjct: 12788658 tagccgaagcaaaagcaggag 12788678



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                            
Query: 29       tagggattgctgactacacaaactatgatgatatgaaatatgct 72
                |||||||||  |||||||||||||||||||| ||||||||||||
Sbjct: 12788199 tagggattgtggactacacaaactatgatgacatgaaatatgct 12788242



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                           
Query: 251      gatcaaggtctctttcttcccgttctcggtcagcatcgaaagg 293
                ||||||||||| ||||||||||||| ||||||||||| |||||
Sbjct: 12788802 gatcaaggtctgtttcttcccgttcacggtcagcatcaaaagg 12788844



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                           
Query: 73       ataaagaaactggatgacactgaatttaagaatgcattttctaaaggttatataagggt 131
                ||||||||||| ||||||| |||||| | |||||| |||||||||||| | ||||||||
Sbjct: 12788459 ataaagaaacttgatgacagtgaattcaggaatgccttttctaaaggtcacataagggt 12788517



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                             
Query: 394      ccaagcaggagcccatctcgttcacggtc 422
                |||||||||||||||||||||||||||||
Sbjct: 12790088 ccaagcaggagcccatctcgttcacggtc 12790116



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                    
Query: 307      agatcaccagcaagatccaaatccccaattgcttct 342
                ||||||||||||||||||||||| |||| |||||||
Sbjct: 12789921 agatcaccagcaagatccaaatctccaaatgcttct 12789956
to top
>dbj|AK106176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C08, full
           insert sequence
          Length = 1352

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 124/149 (83%)
 Strand = Plus / Plus

                                                                       
Query: 40  gactacacaaactatgatgatatgaaatatgctataaagaaactggatgacactgaattt 99
           |||||||||||||||||||| ||||| |||||||| | |||||| |||||  ||||||||
Sbjct: 595 gactacacaaactatgatgacatgaagtatgctatcaggaaacttgatgattctgaattt 654

                                                                       
Query: 100 aagaatgcattttctaaaggttatataagggtgaaggaatacgatggcaaacgtgggcgc 159
           |||||||| || || || |  ||||||||||||||||| || ||||| || ||  | || 
Sbjct: 655 aagaatgccttctcaaaggcctatataagggtgaaggagtatgatggaaagcgcagccgt 714

                                        
Query: 160 tcctactcacgtagccggagcccaagtcg 188
           || |||||||| ||||| |||| ||||||
Sbjct: 715 tcatactcacgaagccgaagccgaagtcg 743



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 304 tcaagatcaccagcaagatc 323
           ||||||||||||||||||||
Sbjct: 877 tcaagatcaccagcaagatc 896
to top
>dbj|AK072839.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141I23, full
           insert sequence
          Length = 1899

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 124/149 (83%)
 Strand = Plus / Plus

                                                                       
Query: 40  gactacacaaactatgatgatatgaaatatgctataaagaaactggatgacactgaattt 99
           |||||||||||||||||||| ||||| |||||||| | |||||| |||||  ||||||||
Sbjct: 663 gactacacaaactatgatgacatgaagtatgctatcaggaaacttgatgattctgaattt 722

                                                                       
Query: 100 aagaatgcattttctaaaggttatataagggtgaaggaatacgatggcaaacgtgggcgc 159
           |||||||| || || || |  ||||||||||||||||| || ||||| || ||  | || 
Sbjct: 723 aagaatgccttctcaaaggcctatataagggtgaaggagtatgatggaaagcgcagccgt 782

                                        
Query: 160 tcctactcacgtagccggagcccaagtcg 188
           || |||||||| ||||| |||| ||||||
Sbjct: 783 tcatactcacgaagccgaagccgaagtcg 811
to top
>gb|DQ019639.1| Triticum aestivum alternative splicing regulator (SRp30a) mRNA,
           complete cds
          Length = 1189

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                       
Query: 46  acaaactatgatgatatgaaatatgctataaagaaactggatgacactgaatttaagaat 105
           |||||||||||||||||||| |||||||||| ||| || ||||| ||||||||||| |||
Sbjct: 563 acaaactatgatgatatgaagtatgctataaggaagcttgatgatactgaatttaaaaat 622

             
Query: 106 gc 107
           ||
Sbjct: 623 gc 624
to top
>gb|BT013695.1| Lycopersicon esculentum clone 132536R, mRNA sequence
          Length = 1929

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                       
Query: 30  agggattgctgactacacaaactatgatgatatgaaatatgctataaagaaactggatga 89
           ||||||||  ||||| || |||||||||||||||| ||| || ||||||||||| |||||
Sbjct: 556 agggattgtggactataccaactatgatgatatgagatacgcgataaagaaacttgatga 615

            
Query: 90  c 90
           |
Sbjct: 616 c 616
to top
>ref|NM_100783.3| Arabidopsis thaliana ATSRP30.1; RNA binding AT1G09140 (ATSRP30.1)
           transcript variant AT1G09140.1 mRNA, complete cds
          Length = 1144

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Plus

                                                                       
Query: 49  aactatgatgatatgaaatatgctataaagaaactggatgacactgaatttaagaatgca 108
           ||||||||||||||||| || || |||| |||||| |||| ||||||||||   ||||| 
Sbjct: 584 aactatgatgatatgaagtacgcaataaggaaacttgatgccactgaatttcgaaatgct 643

                                           
Query: 109 ttttctaaaggttatataagggtgaaggaata 140
           || ||||  | ||||||| |||||| ||||||
Sbjct: 644 ttctctagtgcttatatacgggtgagggaata 675
to top
>ref|NM_148447.2| Arabidopsis thaliana ATSRP30.1; RNA binding AT1G09140 (ATSRP30.1)
           transcript variant AT1G09140.2 mRNA, complete cds
          Length = 1609

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Plus

                                                                       
Query: 49  aactatgatgatatgaaatatgctataaagaaactggatgacactgaatttaagaatgca 108
           ||||||||||||||||| || || |||| |||||| |||| ||||||||||   ||||| 
Sbjct: 604 aactatgatgatatgaagtacgcaataaggaaacttgatgccactgaatttcgaaatgct 663

                                           
Query: 109 ttttctaaaggttatataagggtgaaggaata 140
           || ||||  | ||||||| |||||| ||||||
Sbjct: 664 ttctctagtgcttatatacgggtgagggaata 695
to top
>gb|DQ200373.1| Solanum tuberosum clone 059F05 pre-mRNA splicing factor-like
           protein mRNA, complete cds
          Length = 1257

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 40  gactacacaaactatgatgatatgaaatatgctataaagaaactggatgacactga 95
           ||||||||||| ||||| || ||||||||||||||||  ||||| ||||| |||||
Sbjct: 583 gactacacaaattatgaagacatgaaatatgctataagaaaacttgatgatactga 638



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 183 aagtcgtagccgcagcaaaagcaggagc 210
           |||||||||||| |||| ||||||||||
Sbjct: 702 aagtcgtagccggagcagaagcaggagc 729
to top
>gb|AY150486.1| Arabidopsis thaliana putative SF2/ASF splicing modulator Srp30
           (At1g09140) mRNA, complete cds
          Length = 838

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Plus

                                                                       
Query: 49  aactatgatgatatgaaatatgctataaagaaactggatgacactgaatttaagaatgca 108
           ||||||||||||||||| || || |||| |||||| |||| ||||||||||   ||||| 
Sbjct: 463 aactatgatgatatgaagtacgcaataaggaaacttgatgccactgaatttcgaaatgct 522

                                           
Query: 109 ttttctaaaggttatataagggtgaaggaata 140
           || ||||  | ||||||| |||||| ||||||
Sbjct: 523 ttctctagtgcttatatacgggtgagggaata 554
to top
>gb|AY050912.1| Arabidopsis thaliana putative SF2/ASF splicing modulator Srp30
           protein (At1g09140) mRNA, partial cds
          Length = 933

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Plus

                                                                       
Query: 49  aactatgatgatatgaaatatgctataaagaaactggatgacactgaatttaagaatgca 108
           ||||||||||||||||| || || |||| |||||| |||| ||||||||||   ||||| 
Sbjct: 282 aactatgatgatatgaagtacgcaataaggaaacttgatgccactgaatttcgaaatgct 341

                                           
Query: 109 ttttctaaaggttatataagggtgaaggaata 140
           || ||||  | ||||||| |||||| ||||||
Sbjct: 342 ttctctagtgcttatatacgggtgagggaata 373
to top
>emb|BX816682.1|CNS0AD6Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH62ZD04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1417

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Plus

                                                                       
Query: 49  aactatgatgatatgaaatatgctataaagaaactggatgacactgaatttaagaatgca 108
           ||||||||||||||||| || || |||| |||||| |||| ||||||||||   ||||| 
Sbjct: 491 aactatgatgatatgaagtacgcaataaggaaacttgatgccactgaatttcgaaatgct 550

                                           
Query: 109 ttttctaaaggttatataagggtgaaggaata 140
           || ||||  | ||||||| |||||| ||||||
Sbjct: 551 ttctctagtgcttatatacgggtgagggaata 582
to top
>emb|BX815693.1|CNS0AAVQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS84ZH01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1505

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Plus

                                                                       
Query: 49  aactatgatgatatgaaatatgctataaagaaactggatgacactgaatttaagaatgca 108
           ||||||||||||||||| || || |||| |||||| |||| ||||||||||   ||||| 
Sbjct: 576 aactatgatgatatgaagtacgcaataaggaaacttgatgccactgaatttcgaaatgct 635

                                           
Query: 109 ttttctaaaggttatataagggtgaaggaata 140
           || ||||  | ||||||| |||||| ||||||
Sbjct: 636 ttctctagtgcttatatacgggtgagggaata 667
to top
>gb|BT013343.1| Lycopersicon esculentum clone 135171R, mRNA sequence
          Length = 1677

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 46  acaaactatgatgatatgaaatatgctataaagaaactggatgacactga 95
           |||||||||||||| |||||||||||||| || || || |||||| ||||
Sbjct: 488 acaaactatgatgacatgaaatatgctatcaaaaagcttgatgactctga 537
to top
>gb|BT012710.1| Lycopersicon esculentum clone 113590R, mRNA sequence
          Length = 1107

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 46  acaaactatgatgatatgaaatatgctataaagaaactggatgacactga 95
           |||||||||||||| |||||||||||||| || || || |||||| ||||
Sbjct: 525 acaaactatgatgacatgaaatatgctatcaaaaagcttgatgactctga 574
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 40       gactacacaaactatgatgatatgaaatatgct 72
                |||||||||||||||||||| ||||| ||||||
Sbjct: 28418433 gactacacaaactatgatgacatgaagtatgct 28418401
to top
>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0470D12
          Length = 157248

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 40     gactacacaaactatgatgatatgaaatatgct 72
              |||||||||||||||||||| ||||| ||||||
Sbjct: 143996 gactacacaaactatgatgacatgaagtatgct 143964
to top
>dbj|AP006269.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
           PAC clone:P0304A10
          Length = 21211

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 40  gactacacaaactatgatgatatgaaatatgct 72
           |||||||||||||||||||| ||||| ||||||
Sbjct: 220 gactacacaaactatgatgacatgaagtatgct 188
to top
>dbj|AP006409.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT25E08, TM0299,
             complete sequence
          Length = 109465

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 40    gactacacaaactatgatgatatgaaatatgc 71
             |||||||| || ||||||||||||||||||||
Sbjct: 91346 gactacaccaattatgatgatatgaaatatgc 91315
to top
>ref|NM_116476.3| Arabidopsis thaliana RNA binding / nucleic acid binding AT4G02430
           transcript variant AT4G02430.2 mRNA, complete cds
          Length = 1513

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 184 agtcgtagccgcagcaaaagcaggagc 210
           |||||||||||||||| ||||||||||
Sbjct: 709 agtcgtagccgcagcagaagcaggagc 735
to top
>ref|NM_179206.1| Arabidopsis thaliana RNA binding / nucleic acid binding AT4G02430
           transcript variant AT4G02430.1 mRNA, complete cds
          Length = 1555

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 184 agtcgtagccgcagcaaaagcaggagc 210
           |||||||||||||||| ||||||||||
Sbjct: 719 agtcgtagccgcagcagaagcaggagc 745
to top
>gb|AY056185.1| Arabidopsis thaliana At4g02430 mRNA sequence
          Length = 1523

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 184 agtcgtagccgcagcaaaagcaggagc 210
           |||||||||||||||| ||||||||||
Sbjct: 719 agtcgtagccgcagcagaagcaggagc 745
to top
>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6
          Length = 194892

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 184    agtcgtagccgcagcaaaagcaggagc 210
              |||||||||||||||| ||||||||||
Sbjct: 106400 agtcgtagccgcagcagaagcaggagc 106426
to top
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete
             sequence; splicing factor SF2-like protein (SF2) and
             universal stress protein (USP1) genes and Hv
             receptor-kinase-like pseudogene, complete cds; and
             retrotransposons Sandra6 and Sandra7, complete sequence
          Length = 82293

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 46    acaaactatgatgatatgaaatatgct 72
             |||||||||||||||||||| ||||||
Sbjct: 34648 acaaactatgatgatatgaagtatgct 34674
to top
>emb|BX828050.1|CNS0A30C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH48ZE05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1487

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 184 agtcgtagccgcagcaaaagcaggagc 210
           |||||||||||||||| ||||||||||
Sbjct: 684 agtcgtagccgcagcagaagcaggagc 710
to top
>emb|BX827158.1|CNS0A2S3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS18ZB01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1506

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 184 agtcgtagccgcagcaaaagcaggagc 210
           |||||||||||||||| ||||||||||
Sbjct: 684 agtcgtagccgcagcagaagcaggagc 710
to top
>gb|AF069298.1|T14P8 Arabidopsis thaliana BAC T14P8
          Length = 94536

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 184   agtcgtagccgcagcaaaagcaggagc 210
             |||||||||||||||| ||||||||||
Sbjct: 40214 agtcgtagccgcagcagaagcaggagc 40188
to top
>dbj|AK118074.1| Arabidopsis thaliana At4g02430 mRNA for unknown protein, complete
           cds, clone: RAFL19-32-J05
          Length = 2059

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 184 agtcgtagccgcagcaaaagcaggagc 210
           |||||||||||||||| ||||||||||
Sbjct: 823 agtcgtagccgcagcagaagcaggagc 849
to top
>gb|AC146389.3| Pan troglodytes BAC clone RP43-143J12 from 7, complete sequence
          Length = 141930

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 100    aagaatgcattttctaaaggtt 121
              ||||||||||||||||||||||
Sbjct: 120984 aagaatgcattttctaaaggtt 120963
to top
>gb|AC145994.2| Pan troglodytes BAC clone RP43-13J21 from 7, complete sequence
          Length = 164345

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 100   aagaatgcattttctaaaggtt 121
             ||||||||||||||||||||||
Sbjct: 71421 aagaatgcattttctaaaggtt 71400
to top
>ref|XM_962170.1| PREDICTED: Tribolium castaneum similar to CG6987-PA (LOC655610),
           mRNA
          Length = 1018

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 61  atgaaatatgctataaagaaactgga 86
           ||||||||||||||||||||| ||||
Sbjct: 472 atgaaatatgctataaagaaattgga 497
to top
>gb|AC083870.2|AC083870 Homo sapiens chromosome 7 clone RP11-248K17, complete sequence
          Length = 171530

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 100    aagaatgcattttctaaaggtt 121
              ||||||||||||||||||||||
Sbjct: 118329 aagaatgcattttctaaaggtt 118350
to top
>emb|AL671913.10| Mouse DNA sequence from clone RP23-136P3 on chromosome 4, complete
              sequence
          Length = 220940

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 336    tgcttctccagcaaacggtgtagtgacaag 365
              ||||||| ||||||| ||||||||||||||
Sbjct: 171039 tgcttctacagcaaatggtgtagtgacaag 171068
to top
>gb|AC150654.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094L06,
              complete sequence
          Length = 189328

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 56     atgatatgaaatatgctataa 76
              |||||||||||||||||||||
Sbjct: 106193 atgatatgaaatatgctataa 106173
to top
>gb|AC140724.4| Mus musculus chromosome 8, clone RP24-291N1, complete sequence
          Length = 159182

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 523   ccagtctttcattcaactagt 543
             |||||||||||||||||||||
Sbjct: 64791 ccagtctttcattcaactagt 64811
to top
>gb|AC109646.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017K22,
              complete sequence
          Length = 176399

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 56     atgatatgaaatatgctataa 76
              |||||||||||||||||||||
Sbjct: 175088 atgatatgaaatatgctataa 175068
to top
>gb|AC134323.3| Mus musculus BAC clone RP24-512P7 from chromosome 8, complete sequence
          Length = 176667

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 523    ccagtctttcattcaactagt 543
              |||||||||||||||||||||
Sbjct: 165703 ccagtctttcattcaactagt 165683
to top
>emb|AL645907.9| Mouse DNA sequence from clone RP23-9N7 on chromosome 11 Contains the 5'
              end of a novel gene, a novel gene, the Clk4 gene for CDC
              like kinase 4, the 5' end of the Col23a1 gene for
              procollagen (type XXIII, alpha 1) and two CpG islands,
              complete sequence
          Length = 219268

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 355    gtagtgacaagttcaagggca 375
              |||||||||||||||||||||
Sbjct: 103463 gtagtgacaagttcaagggca 103483
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 56       atgatatgaaatatgctataa 76
                |||||||||||||||||||||
Sbjct: 16120398 atgatatgaaatatgctataa 16120378
to top
>gb|AC107218.4| Homo sapiens BAC clone RP11-561A13 from 2, complete sequence
          Length = 164620

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 83    tggatgacactgaatttaaga 103
             |||||||||||||||||||||
Sbjct: 20292 tggatgacactgaatttaaga 20272
to top
>ref|XM_226742.3| PREDICTED: Rattus norvegicus baculoviral IAP repeat-containing 1b
            (Birc1b), mRNA
          Length = 4275

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 49   aactatgatgatatgaaatat 69
            |||||||||||||||||||||
Sbjct: 2980 aactatgatgatatgaaatat 3000
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 56       atgatatgaaatatgctataa 76
                |||||||||||||||||||||
Sbjct: 16210420 atgatatgaaatatgctataa 16210400
to top
>ref|XM_633915.1| Dictyostelium discoideum hypothetical protein (DDB0218510), partial
           mRNA
          Length = 3873

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 52  tatgatgatatgaaatatgc 71
           ||||||||||||||||||||
Sbjct: 880 tatgatgatatgaaatatgc 899
to top
>gb|BC059733.1| Mus musculus protamine 1, mRNA (cDNA clone MGC:74397
           IMAGE:6774637), complete cds
          Length = 430

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gccgcagcaaaagcaggagc 210
           ||||||||||||||||||||
Sbjct: 112 gccgcagcaaaagcaggagc 131
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 301    ccgtcaagatcaccagcaagatcc 324
              ||||||||||||||||||| ||||
Sbjct: 405753 ccgtcaagatcaccagcaacatcc 405730
to top
>ref|XM_799269.1| Trypanosoma cruzi strain CL Brener hexose transporter
            (Tc00.1047053508551.30) partial mRNA
          Length = 1635

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 371  gggcaagcccaaagaagcacagtccaag 398
            |||||||| ||||||||||| |||||||
Sbjct: 1303 gggcaagcacaaagaagcacggtccaag 1276
to top
>ref|XM_802916.1| Trypanosoma cruzi strain CL Brener hexose transporter
            (Tc00.1047053511041.40) partial mRNA
          Length = 1635

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 371  gggcaagcccaaagaagcacagtccaag 398
            |||||||| ||||||||||| |||||||
Sbjct: 1303 gggcaagcacaaagaagcacggtccaag 1276
to top
>ref|XM_809728.1| Trypanosoma cruzi strain CL Brener hexose transporter
            (Tc00.1047053506355.10) partial mRNA
          Length = 1635

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 371  gggcaagcccaaagaagcacagtccaag 398
            |||||||| ||||||||||| |||||||
Sbjct: 1303 gggcaagcacaaagaagcacggtccaag 1276
to top
>ref|XM_797240.1| Trypanosoma cruzi strain CL Brener glucose transporter
           (Tc00.1047053424937.10) partial mRNA
          Length = 516

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 371 gggcaagcccaaagaagcacagtccaag 398
           |||||||| ||||||||||| |||||||
Sbjct: 184 gggcaagcacaaagaagcacggtccaag 157
to top
>gb|AC136288.23| Medicago truncatula clone mth2-13o7, complete sequence
          Length = 110437

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 78    gaaactggatgacactgaatttaagaatgcattttc 113
             |||||| |||||| ||||||||  ||||||||||||
Sbjct: 59144 gaaacttgatgactctgaatttcggaatgcattttc 59109
to top
>emb|Z46939.1|BTPRMTNP2 R.norvegicus PRM1, PRM2, PRM3 and TNP2 genes
          Length = 13187

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gccgcagcaaaagcaggagc 210
           ||||||||||||||||||||
Sbjct: 848 gccgcagcaaaagcaggagc 867
to top
>gb|AC119566.11| Homo sapiens 12 BAC RP11-41H6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 70009

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 96    atttaagaatgcattttctaaagg 119
             |||||| |||||||||||||||||
Sbjct: 42883 atttaaaaatgcattttctaaagg 42906
to top
>gb|AC096639.2| Homo sapiens chromosome 1 clone RP11-323I1, complete sequence
          Length = 195410

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    aatttaagaatgcattttct 114
             ||||||||||||||||||||
Sbjct: 73273 aatttaagaatgcattttct 73254
to top
>gb|AC134522.9| Medicago truncatula clone mth2-12g4, complete sequence
          Length = 129197

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 78    gaaactggatgacactgaatttaagaatgcattttc 113
             |||||| |||||| ||||||||  ||||||||||||
Sbjct: 69404 gaaacttgatgactctgaatttcggaatgcattttc 69369
to top
>gb|AC099054.2| Homo sapiens chromosome 3 clone RP11-489C3, complete sequence
          Length = 201564

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 67     tatgctataaagaaactgga 86
              ||||||||||||||||||||
Sbjct: 105686 tatgctataaagaaactgga 105667
to top
>gb|AC080009.13| Homo sapiens 3q BAC RP11-460M17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163469

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     aatatgctataaagaaactg 84
              ||||||||||||||||||||
Sbjct: 111602 aatatgctataaagaaactg 111583
to top
>gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold
          Length = 501879

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   ttcttcccgttctcggtcag 283
             ||||||||||||||||||||
Sbjct: 11684 ttcttcccgttctcggtcag 11665
to top
>dbj|AK018980.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700123E07 product:protamine 1, full
           insert sequence
          Length = 409

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gccgcagcaaaagcaggagc 210
           ||||||||||||||||||||
Sbjct: 116 gccgcagcaaaagcaggagc 135
to top
>dbj|AK007068.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700094L18 product:protamine 1, full
           insert sequence
          Length = 401

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gccgcagcaaaagcaggagc 210
           ||||||||||||||||||||
Sbjct: 113 gccgcagcaaaagcaggagc 132
to top
>gb|AC073288.27| Homo sapiens 3 BAC RP11-543D10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 174025

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   gaatagaagcactgcaccgc 459
             ||||||||||||||||||||
Sbjct: 73344 gaatagaagcactgcaccgc 73325
to top
>gb|AC073573.27| Homo sapiens 12 BAC RP11-1136G11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 157807

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 459   cagcagtgtgaacttgtatt 478
             ||||||||||||||||||||
Sbjct: 25523 cagcagtgtgaacttgtatt 25504
to top
>gb|AC093927.3| Homo sapiens chromosome 3 clone RP11-81I24, complete sequence
          Length = 183190

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    tatgctataaagaaactgga 86
             ||||||||||||||||||||
Sbjct: 21430 tatgctataaagaaactgga 21411
to top
>dbj|BS000062.1| Pan troglodytes chromosome 22 clone:PTB-045C17, map 22, complete
             sequences
          Length = 171187

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    aaactatgatgatatgaaat 67
             ||||||||||||||||||||
Sbjct: 86121 aaactatgatgatatgaaat 86140
to top
>gb|AY107576.1| Zea mays PCO119766 mRNA sequence
          Length = 657

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 361 acaagttcaagggcaagccc 380
           ||||||||||||||||||||
Sbjct: 354 acaagttcaagggcaagccc 373
to top
>emb|CT573504.2| Medicago truncatula chromosome 5 clone mth2-178o19, COMPLETE SEQUENCE
          Length = 132030

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 358  gtgacaagttcaagggcaag 377
            ||||||||||||||||||||
Sbjct: 4791 gtgacaagttcaagggcaag 4810
to top
>dbj|AP001679.1| Homo sapiens genomic DNA, chromosome 21q, section 23/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     aaactatgatgatatgaaat 67
              ||||||||||||||||||||
Sbjct: 160889 aaactatgatgatatgaaat 160908
to top
>gb|AC109163.16| Mus musculus chromosome 8, clone RP24-174F12, complete sequence
          Length = 189849

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    ctggatgacactgaatttaa 101
             ||||||||||||||||||||
Sbjct: 66653 ctggatgacactgaatttaa 66672
to top
>ref|NM_013637.4| Mus musculus protamine 1 (Prm1), mRNA
          Length = 401

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gccgcagcaaaagcaggagc 210
           ||||||||||||||||||||
Sbjct: 113 gccgcagcaaaagcaggagc 132
to top
>ref|NM_001002850.1| Rattus norvegicus protamine 1 (mapped) (Prm1_mapped), mRNA
          Length = 156

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gccgcagcaaaagcaggagc 210
           ||||||||||||||||||||
Sbjct: 20  gccgcagcaaaagcaggagc 39
to top
>emb|CT033765.2| Medicago truncatula chromosome 5 clone mth2-105d20, COMPLETE SEQUENCE
          Length = 131814

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 358  gtgacaagttcaagggcaag 377
            ||||||||||||||||||||
Sbjct: 5913 gtgacaagttcaagggcaag 5894
to top
>emb|CT010583.8| Mouse DNA sequence from clone RP23-203B24 on chromosome 16, complete
             sequence
          Length = 234878

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   gccgcagcaaaagcaggagc 210
             ||||||||||||||||||||
Sbjct: 86340 gccgcagcaaaagcaggagc 86321
to top
>emb|X14003.1|MMPROT1R Mouse protamine 1 mRNA
          Length = 399

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gccgcagcaaaagcaggagc 210
           ||||||||||||||||||||
Sbjct: 112 gccgcagcaaaagcaggagc 131
to top
>emb|X07625.1|MMPROT1 Mouse protamine 1 gene
          Length = 1186

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gccgcagcaaaagcaggagc 210
           ||||||||||||||||||||
Sbjct: 672 gccgcagcaaaagcaggagc 691
to top
>gb|M83729.1|RATEXONS Rat exons 1-2
          Length = 402

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gccgcagcaaaagcaggagc 210
           ||||||||||||||||||||
Sbjct: 54  gccgcagcaaaagcaggagc 73
to top
>emb|Z47352.1|MMPRMGNS M.musculus PRM1, PRM2, PRM3 and TNP1 genes
          Length = 13812

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gccgcagcaaaagcaggagc 210
           ||||||||||||||||||||
Sbjct: 672 gccgcagcaaaagcaggagc 691
to top
>gb|AC121107.19| Mus musculus chromosome 1, clone RP24-240P15, complete sequence
          Length = 155435

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     aatttaagaatgcattttct 114
              ||||||||||||||||||||
Sbjct: 111037 aatttaagaatgcattttct 111056
to top
>gb|DQ082992.1| Mus musculus protamin 1 antisense RNA (Prm1) gene, partial sequence
          Length = 203

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 191 gccgcagcaaaagcaggagc 210
           ||||||||||||||||||||
Sbjct: 147 gccgcagcaaaagcaggagc 128
to top
>gb|DQ072382.1| Mus musculus A-Prm(1-2)-c antisense RNA, complete sequence
          Length = 1216

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 191 gccgcagcaaaagcaggagc 210
           ||||||||||||||||||||
Sbjct: 948 gccgcagcaaaagcaggagc 929
to top
>gb|DQ072381.1| Mus musculus A-Prm(1-2)-b antisense RNA, complete sequence
          Length = 1069

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 191 gccgcagcaaaagcaggagc 210
           ||||||||||||||||||||
Sbjct: 801 gccgcagcaaaagcaggagc 782
to top
>gb|DQ072380.1| Mus musculus A-Prm(1-2)-a antisense RNA, complete sequence
          Length = 953

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 191 gccgcagcaaaagcaggagc 210
           ||||||||||||||||||||
Sbjct: 685 gccgcagcaaaagcaggagc 666
to top
>gb|M27500.1|MUSPROT Mus musculus protamine mRNA, complete cds
          Length = 385

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gccgcagcaaaagcaggagc 210
           ||||||||||||||||||||
Sbjct: 98  gccgcagcaaaagcaggagc 117
to top
>gb|K02926.1|MUSPRO1S Mouse protamine 1 mRNA, complete cds
          Length = 385

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 191 gccgcagcaaaagcaggagc 210
           ||||||||||||||||||||
Sbjct: 98  gccgcagcaaaagcaggagc 117
to top
>gb|U05588.1|TCU05588 Trypanosoma cruzi CL hexose transporter gene, complete cds
          Length = 2583

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 371  gggcaagcccaaagaagcacagtccaag 398
            |||||||| ||||||||||| |||||||
Sbjct: 1575 gggcaagcacaaagaagcacggtccaag 1548
to top
>dbj|AP001251.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B5P9, LL56-APP
              region, complete sequence
          Length = 150681

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     aaactatgatgatatgaaat 67
              ||||||||||||||||||||
Sbjct: 149112 aaactatgatgatatgaaat 149131


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,786,135
Number of Sequences: 3902068
Number of extensions: 4786135
Number of successful extensions: 98536
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98188
Number of HSP's gapped (non-prelim): 344
length of query: 550
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 527
effective length of database: 17,143,297,704
effective search space: 9034517890008
effective search space used: 9034517890008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top