ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd21d24 |
|---|---|
| Clone Library Name | barley_pub |
>RUBR_SYNY3 (P73068) Rubredoxin (Rd)| Length = 115 Score = 71.6 bits (174), Expect = 1e-12 Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 2/76 (2%) Frame = +2 Query: 254 EEQFAVLNTGVHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSK 433 E+ A L + HECR+CGY+Y ++GD V PG PF +P +W+CP CGA +++F S Sbjct: 7 EKTLAELASPNHECRACGYVYIPSQGDQKTSVSPGTPFEALPLNWKCPVCGAPRNYFIST 66 Query: 434 SVEIA--GFAQNQQFG 475 A GFA+N +G Sbjct: 67 GETDAPSGFAENLNYG 82
>RUBR_METTH (O26258) Probable rubredoxin (RD)| Length = 63 Score = 67.4 bits (163), Expect = 2e-11 Identities = 24/46 (52%), Positives = 32/46 (69%) Frame = +2 Query: 287 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 424 ++CR CGY+YD KG+P PPG PF +P+ WRCP+CGA + F Sbjct: 14 YKCRVCGYIYDPEKGEPRTDTPPGTPFEDLPETWRCPSCGAKKKMF 59
>HRB_MOOTA (Q9FDN6) High molecular weight rubredoxin (Nitric oxide reductase| NADH:FprA oxidoreductase) Length = 229 Score = 65.5 bits (158), Expect = 7e-11 Identities = 24/58 (41%), Positives = 36/58 (62%) Frame = +2 Query: 254 EEQFAVLNTGVHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 427 E+ L + ++C C Y+YD +GDP + + PG PFA +P+DW CP CGA + F+ Sbjct: 170 EKDKTALASPKYQCTICNYVYDPVQGDPEHGIAPGTPFADLPEDWTCPICGAGKDAFE 227
>RUBR_ANAVT (Q9XBL8) Rubredoxin (Rd)| Length = 111 Score = 64.7 bits (156), Expect = 1e-10 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 2/64 (3%) Frame = +2 Query: 290 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDS--KSVEIAGFAQN 463 ECRSCGY+Y+ KGD + + P PFA++P +WRCP C A ++ F + + +GF +N Sbjct: 15 ECRSCGYVYEPEKGDSKHDIAPETPFAELPINWRCPVCTAKKAAFSNIGPAGTASGFREN 74 Query: 464 QQFG 475 +G Sbjct: 75 LGYG 78
>RUBR_DESGI (P00270) Rubredoxin (Rd)| Length = 52 Score = 64.3 bits (155), Expect = 2e-10 Identities = 24/50 (48%), Positives = 32/50 (64%) Frame = +2 Query: 284 VHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSK 433 ++ C CGY YD AKGDP + PG F +PDDW CP CGA++ F+ + Sbjct: 3 IYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASKDAFEKQ 52
>RUBR_ANASP (Q9WWN1) Rubredoxin (Rd)| Length = 111 Score = 63.9 bits (154), Expect = 2e-10 Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 2/64 (3%) Frame = +2 Query: 290 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDS--KSVEIAGFAQN 463 ECRSCGY+Y+ KGD + + P PFA++P +WRCP C A ++ F + + +GF +N Sbjct: 15 ECRSCGYVYEPEKGDNKHDIAPETPFAELPINWRCPVCTAKKAAFTNIGPAGTASGFREN 74 Query: 464 QQFG 475 +G Sbjct: 75 LGYG 78
>RUBL_RHILV (P28151) Probable rubredoxin hupI| Length = 70 Score = 63.9 bits (154), Expect = 2e-10 Identities = 24/45 (53%), Positives = 32/45 (71%) Frame = +2 Query: 290 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 424 EC C ++YD A+GDP + +PPG PF+ + +DWRCP C A QS F Sbjct: 19 ECGICWHVYDPAEGDPVWQIPPGTPFSNLTEDWRCPNCDALQSKF 63
>RUBR_PYRFU (P24297) Rubredoxin (Rd)| Length = 53 Score = 62.4 bits (150), Expect = 6e-10 Identities = 23/45 (51%), Positives = 31/45 (68%) Frame = +2 Query: 293 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 427 C+ CGY+YD+ GDP + PG F ++PDDW CP CGA +S F+ Sbjct: 5 CKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEFE 49
>RUBR_PYRAB (Q9V099) Rubredoxin (Rd)| Length = 53 Score = 62.4 bits (150), Expect = 6e-10 Identities = 23/45 (51%), Positives = 31/45 (68%) Frame = +2 Query: 293 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 427 C+ CGY+YD+ +GDP + PG F +PDDW CP CGA +S F+ Sbjct: 6 CKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAPKSEFE 50
>RUBR_CLOTS (P19500) Rubredoxin (Rd)| Length = 52 Score = 61.2 bits (147), Expect = 1e-09 Identities = 22/46 (47%), Positives = 29/46 (63%) Frame = +2 Query: 290 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 427 +C CGY+YD GDP+ +PPG F +PDDW CP CG + F+ Sbjct: 5 QCTVCGYIYDPEVGDPTQNIPPGTKFEDLPDDWVCPDCGVGKDQFE 50
>RUBR_CHLLT (P09947) Rubredoxin (Rd)| Length = 53 Score = 60.5 bits (145), Expect = 2e-09 Identities = 22/48 (45%), Positives = 30/48 (62%) Frame = +2 Query: 293 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKS 436 C CGY+YD A G+P P+ PG F +P+DW CP CG + F+ +S Sbjct: 6 CSVCGYVYDPADGEPDDPIDPGTGFEDLPEDWVCPVCGVDKDLFEPES 53
>RUBR3_CHLTE (P58025) Rubredoxin 3 (Rd 3)| Length = 53 Score = 60.1 bits (144), Expect = 3e-09 Identities = 24/48 (50%), Positives = 29/48 (60%) Frame = +2 Query: 293 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKS 436 C CGY YD A GDP + PG F +P+DW CP CG +SFF+ S Sbjct: 6 CVPCGYEYDPADGDPENGIEPGTAFEDLPEDWVCPVCGVDKSFFEPVS 53
>RUBR_CLOAB (Q9AL94) Rubredoxin (Rd)| Length = 54 Score = 59.7 bits (143), Expect = 4e-09 Identities = 23/45 (51%), Positives = 28/45 (62%) Frame = +2 Query: 293 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 427 C CGY+YD A+GDP V PG F +PDDW CP CG + F+ Sbjct: 6 CVVCGYIYDPAEGDPDNGVNPGTSFEDIPDDWVCPLCGVGKDQFE 50
>RUBR_HELMO (P56263) Rubredoxin (Rd)| Length = 52 Score = 59.3 bits (142), Expect = 5e-09 Identities = 22/45 (48%), Positives = 29/45 (64%) Frame = +2 Query: 293 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 427 C CGY+YD AKGDP + + PG F +P DW CP CG ++ F+ Sbjct: 6 CLVCGYVYDPAKGDPDHGIAPGTAFEDLPADWVCPLCGVSKDEFE 50
>RUBR2_CLOPE (P14072) Rubredoxin 2 (Rd 2)| Length = 53 Score = 59.3 bits (142), Expect = 5e-09 Identities = 24/44 (54%), Positives = 27/44 (61%) Frame = +2 Query: 293 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 424 C CGY+YD A GDP V PG F +PDDW CP CG +S F Sbjct: 6 CDVCGYIYDPAVGDPDNGVEPGTEFKDIPDDWVCPLCGVDKSQF 49
>RUBR_DESVM (P15412) Rubredoxin (Rd)| Length = 52 Score = 58.9 bits (141), Expect = 6e-09 Identities = 25/45 (55%), Positives = 28/45 (62%) Frame = +2 Query: 293 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 427 C CGY YD A+GDP V PG F VP DW CP CGA +S F+ Sbjct: 6 CTVCGYEYDPAEGDPDNGVKPGTAFEDVPADWVCPICGAPKSEFE 50
>RUBR_BUTME (P14071) Rubredoxin (Rd)| Length = 53 Score = 58.5 bits (140), Expect = 8e-09 Identities = 23/48 (47%), Positives = 30/48 (62%) Frame = +2 Query: 293 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKS 436 C CGY+YD A GDP V PG FA +P+DW CP CG ++ F ++ Sbjct: 6 CDICGYVYDPAVGDPDNGVAPGTAFADLPEDWVCPECGVSKDEFSPEA 53
>RUBR_DESVH (P00269) Rubredoxin (Rd)| Length = 52 Score = 58.2 bits (139), Expect = 1e-08 Identities = 24/46 (52%), Positives = 29/46 (63%) Frame = +2 Query: 293 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDS 430 C CGY YD A+GDP V PG F +P DW CP CGA +S F++ Sbjct: 6 CTVCGYEYDPAEGDPDNGVKPGTSFDDLPADWVCPVCGAPKSEFEA 51
>RUBR1_METJA (Q58145) Probable rubredoxin 1 (RD 1)| Length = 80 Score = 58.2 bits (139), Expect = 1e-08 Identities = 20/39 (51%), Positives = 28/39 (71%) Frame = +2 Query: 287 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTC 403 ++C+ CG++YD KGDPS +PP PF ++PD W CP C Sbjct: 22 YKCKVCGWVYDPLKGDPSQNIPPKTPFEELPDTWICPVC 60
>RUBR_AZOVI (P30778) Rubredoxin (Rd)| Length = 72 Score = 57.8 bits (138), Expect = 1e-08 Identities = 23/47 (48%), Positives = 29/47 (61%) Frame = +2 Query: 284 VHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 424 V EC+ C YD A+GDP + +PPG PFA +P WRCP C + F Sbjct: 21 VLECKICWQRYDPAEGDPVWQIPPGTPFAALPAHWRCPRCDGDREQF 67
>RUBR1_CHLTE (P58992) Rubredoxin 1 (Rd 1)| Length = 69 Score = 57.8 bits (138), Expect = 1e-08 Identities = 21/44 (47%), Positives = 29/44 (65%) Frame = +2 Query: 293 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 424 C CGY+YD A+G+ + PG+PF K+PDDW CP C ++ F Sbjct: 19 CAECGYIYDPAEGNLETNIRPGMPFDKLPDDWSCPVCNHPKNQF 62
>RUBR4_RHOSQ (P0A4F1) Rubredoxin 4| Length = 60 Score = 57.0 bits (136), Expect = 2e-08 Identities = 23/53 (43%), Positives = 33/53 (62%) Frame = +2 Query: 284 VHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 442 +++C CG+ YD+A G P + PG + +P+DW CP CGAA+S F VE Sbjct: 6 LYQCAQCGFEYDEAVGWPEDGIEPGTRWDDIPEDWSCPDCGAAKSDFFMVEVE 58
>RUBR4_RHOER (P0A4F0) Rubredoxin 4| Length = 60 Score = 57.0 bits (136), Expect = 2e-08 Identities = 23/53 (43%), Positives = 33/53 (62%) Frame = +2 Query: 284 VHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 442 +++C CG+ YD+A G P + PG + +P+DW CP CGAA+S F VE Sbjct: 6 LYQCAQCGFEYDEAVGWPEDGIEPGTRWDDIPEDWSCPDCGAAKSDFFMVEVE 58
>RUBR_CLOPA (P00268) Rubredoxin (Rd)| Length = 54 Score = 56.2 bits (134), Expect = 4e-08 Identities = 21/47 (44%), Positives = 27/47 (57%) Frame = +2 Query: 287 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 427 + C CGY+Y+ GDP V PG F +PDDW CP CG + F+ Sbjct: 4 YTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFE 50
>RUBR2_DESDE (Q93PP8) Rubredoxin 2 (Rd-2)| Length = 61 Score = 56.2 bits (134), Expect = 4e-08 Identities = 23/48 (47%), Positives = 29/48 (60%) Frame = +2 Query: 299 SCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 442 +CGY+YD +GD VP G F +P+DWRCP CGA + F S E Sbjct: 13 NCGYVYDPDRGDKRRKVPAGTKFEDLPEDWRCPVCGAGKKSFRRLSDE 60
>RUBR_CLOST (P23474) Rubredoxin (Rd)| Length = 53 Score = 55.8 bits (133), Expect = 5e-08 Identities = 20/48 (41%), Positives = 28/48 (58%) Frame = +2 Query: 293 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKS 436 C CGY+YD GDP + PG F +P+DW CP CG + F+ ++ Sbjct: 6 CTVCGYVYDPEVGDPDNNINPGTSFQDIPEDWVCPLCGVGKDQFEEEA 53
>RUBR2_CHLTE (P58993) Rubredoxin 2 (Rd 2)| Length = 52 Score = 55.8 bits (133), Expect = 5e-08 Identities = 20/45 (44%), Positives = 26/45 (57%) Frame = +2 Query: 290 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 424 +C CGY+Y+ GDP +P G F +PD W CP CGA + F Sbjct: 5 KCNICGYIYNPETGDPEGDIPAGTSFESLPDSWMCPVCGAGKEEF 49
>RUBR_MEGEL (P00271) Rubredoxin (Rd)| Length = 52 Score = 55.5 bits (132), Expect = 7e-08 Identities = 24/46 (52%), Positives = 30/46 (65%) Frame = +2 Query: 287 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 424 +EC CGY+YD+A+GD V G FA +P DW CPTCGA + F Sbjct: 4 YECSICGYIYDEAEGDDGN-VAAGTKFADLPADWVCPTCGADKDAF 48
>NORV_SHIFL (P59405) Anaerobic nitric oxide reductase flavorubredoxin (FlRd)| (FlavoRb) Length = 479 Score = 55.1 bits (131), Expect = 9e-08 Identities = 21/51 (41%), Positives = 32/51 (62%) Frame = +2 Query: 290 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 442 +C C ++YD AKG+P V PG P+++VPD++ CP C + FD + E Sbjct: 427 QCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVFDELASE 477
>NORV_ECOL6 (P59404) Anaerobic nitric oxide reductase flavorubredoxin (FlRd)| (FlavoRb) Length = 479 Score = 55.1 bits (131), Expect = 9e-08 Identities = 21/51 (41%), Positives = 32/51 (62%) Frame = +2 Query: 290 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 442 +C C ++YD AKG+P V PG P+++VPD++ CP C + FD + E Sbjct: 427 QCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVFDELASE 477
>RUBR2_METJA (Q58150) Probable rubredoxin 2 (RD 2)| Length = 55 Score = 55.1 bits (131), Expect = 9e-08 Identities = 20/41 (48%), Positives = 29/41 (70%) Frame = +2 Query: 302 CGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 424 CG++YD+ KG+PS +PPG F +PD +RCP CG ++ F Sbjct: 11 CGWVYDEDKGEPSQNIPPGTKFEDLPDTFRCPQCGLGKNAF 51
>NORV_ECO57 (Q8X852) Anaerobic nitric oxide reductase flavorubredoxin homolog| (FlRd homolog) (FlavoRb homolog) Length = 411 Score = 55.1 bits (131), Expect = 9e-08 Identities = 21/51 (41%), Positives = 32/51 (62%) Frame = +2 Query: 290 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 442 +C C ++YD AKG+P V PG P+++VPD++ CP C + FD + E Sbjct: 359 QCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVFDELASE 409
>RUBR_ACIAD (P42453) Rubredoxin (Rd)| Length = 54 Score = 54.7 bits (130), Expect = 1e-07 Identities = 19/47 (40%), Positives = 31/47 (65%) Frame = +2 Query: 287 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 427 ++C CG++YD+A+G P + PG + +PDDW CP CG ++ F+ Sbjct: 4 YQCIVCGWIYDEAEGWPQDGIAPGTKWEDIPDDWTCPDCGVSKVDFE 50
>RUBR2_PSEOL (P00272) Rubredoxin 2 (Two-iron rubredoxin)| Length = 172 Score = 53.9 bits (128), Expect = 2e-07 Identities = 20/41 (48%), Positives = 27/41 (65%) Frame = +2 Query: 293 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQ 415 C +CG++YD+A GD + PG F +PDDW CP CGA + Sbjct: 123 CITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGATK 163 Score = 45.4 bits (106), Expect = 7e-05 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = +2 Query: 287 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTC 403 ++C C Y+YD++ G+ PG P+ +P+DW CP C Sbjct: 3 YKCPDCNYVYDESAGNVHEGFSPGTPWHLIPEDWCCPDC 41
>NORV_ECOLI (Q46877) Anaerobic nitric oxide reductase flavorubredoxin (FlRd)| (FlavoRb) Length = 479 Score = 53.5 bits (127), Expect = 3e-07 Identities = 20/51 (39%), Positives = 32/51 (62%) Frame = +2 Query: 290 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 442 +C C ++YD AKG+P V PG P+++VPD++ CP C + F+ + E Sbjct: 427 QCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVFEELASE 477
>RUBR2_RHOER (Q9AE63) Rubredoxin 2| Length = 63 Score = 53.5 bits (127), Expect = 3e-07 Identities = 21/50 (42%), Positives = 31/50 (62%) Frame = +2 Query: 293 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 442 C CG+ YD+A G P + PG + ++P+DW CP CGAA+ F+ V+ Sbjct: 13 CLQCGFEYDEAIGWPDDGIEPGTRWDEIPEDWSCPDCGAAKVDFEMVEVD 62
>RUBR3_RHOSQ (P0A4E9) Rubredoxin 3| Length = 61 Score = 53.1 bits (126), Expect = 4e-07 Identities = 20/43 (46%), Positives = 26/43 (60%) Frame = +2 Query: 287 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQ 415 + C C Y+YD++KG P P G P+ VPDDW CP CG + Sbjct: 4 YRCPVCEYVYDESKGAPREGFPAGTPWDAVPDDWCCPDCGVRE 46
>RUBR3_RHOER (P0A4E8) Rubredoxin 3| Length = 61 Score = 53.1 bits (126), Expect = 4e-07 Identities = 20/43 (46%), Positives = 26/43 (60%) Frame = +2 Query: 287 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQ 415 + C C Y+YD++KG P P G P+ VPDDW CP CG + Sbjct: 4 YRCPVCEYVYDESKGAPREGFPAGTPWDAVPDDWCCPDCGVRE 46
>RUBL_BRAJA (P48344) Probable rubredoxin hupI| Length = 69 Score = 52.8 bits (125), Expect = 5e-07 Identities = 21/45 (46%), Positives = 27/45 (60%) Frame = +2 Query: 290 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 424 EC C +YD A GD + PG PFA +P++W CP C A +S F Sbjct: 20 ECGICWTVYDPADGDDVAQIAPGTPFAALPEEWHCPNCDAPKSKF 64
>HUPJ_RHOCA (Q03009) Probable rubredoxin hupJ| Length = 278 Score = 52.4 bits (124), Expect = 6e-07 Identities = 21/52 (40%), Positives = 29/52 (55%) Frame = +2 Query: 269 VLNTGVHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 424 + + + EC+ C YD A GD V PG PF +P+DW CP C A ++ F Sbjct: 20 ISDLAIMECKICWTPYDPASGDEFRQVLPGTPFTALPEDWHCPNCDAPKAQF 71
>NORV_SALTI (Q8Z4C5) Anaerobic nitric oxide reductase flavorubredoxin (FlRd)| (FlavoRb) Length = 479 Score = 51.2 bits (121), Expect = 1e-06 Identities = 20/51 (39%), Positives = 30/51 (58%) Frame = +2 Query: 290 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 442 +C C ++YD A G+P V PG P++ VPD++ CP C + FD + E Sbjct: 427 QCSVCQWIYDPALGEPLQDVAPGTPWSDVPDNFLCPECSLGKDVFDVLATE 477
>RUBR1_CLOPE (Q8XMB2) Rubredoxin 1 (Rd 1)| Length = 53 Score = 51.2 bits (121), Expect = 1e-06 Identities = 20/44 (45%), Positives = 24/44 (54%) Frame = +2 Query: 293 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 424 C CGY+YD GDP V PG F +PD W CP C ++ F Sbjct: 6 CDVCGYIYDPVVGDPDNGVAPGTKFKDIPDTWVCPLCKLDKTHF 49
>NORV_SALTY (Q8ZMJ7) Anaerobic nitric oxide reductase flavorubredoxin (FlRd)| (FlavoRb) Length = 479 Score = 50.1 bits (118), Expect = 3e-06 Identities = 20/51 (39%), Positives = 29/51 (56%) Frame = +2 Query: 290 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 442 +C C ++YD A G+P V PG P+ VPD++ CP C + FD + E Sbjct: 427 QCSVCQWIYDPALGEPLQDVAPGTPWNDVPDNFLCPECSLGKDVFDVLATE 477
>RUBR_RALEU (P31912) Rubredoxin (Rd)| Length = 78 Score = 49.7 bits (117), Expect = 4e-06 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Frame = +2 Query: 290 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTC-GAAQSF 421 EC+ C + YD GDP + + PG F+ +P WRCP C G A+ F Sbjct: 27 ECKICWWEYDPEVGDPVWQIAPGTSFSALPAHWRCPNCDGEAEQF 71
>RUBR_AZOCH (P48343) Rubredoxin in uptake hydrogenase operon| Length = 72 Score = 47.8 bits (112), Expect = 1e-05 Identities = 20/47 (42%), Positives = 26/47 (55%) Frame = +2 Query: 284 VHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 424 V EC+ C + YD A GD + + G PFA +P WRCP C + F Sbjct: 21 VLECKICWHRYDPAVGDEVWQILAGTPFAALPAHWRCPQCDGDREQF 67
>RUBR_TREPA (O83956) Rubredoxin (Rd)| Length = 52 Score = 47.0 bits (110), Expect = 3e-05 Identities = 18/48 (37%), Positives = 25/48 (52%) Frame = +2 Query: 281 GVHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 424 G + C CG+ Y+ GD +P G F +PD W CP CG ++ F Sbjct: 2 GTYMCDLCGWGYNPEVGDADGGIPAGTAFENLPDHWECPLCGVDKTSF 49
>RUBR1_DESDE (P04170) Rubredoxin 1 (Rd-1)| Length = 45 Score = 45.4 bits (106), Expect = 7e-05 Identities = 19/44 (43%), Positives = 25/44 (56%) Frame = +2 Query: 293 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 424 C CGY YD A+ D +PF ++PDDW CP CG ++ F Sbjct: 6 CNVCGYEYDPAEHD-------NVPFDQLPDDWCCPVCGVSKDQF 42
>NORV_VIBVU (Q8D4F8) Anaerobic nitric oxide reductase flavorubredoxin (FlRd)| (FlavoRb) Length = 494 Score = 45.1 bits (105), Expect = 1e-04 Identities = 27/96 (28%), Positives = 45/96 (46%) Frame = +2 Query: 137 ALETKQEDAAGVGVGDLTTPLPGELDAEEDVPKLDPRRFEEQFAVLNTGVHECRSCGYLY 316 A++ K + V TP+ G ++A++ + + P A V C C ++Y Sbjct: 397 AVKDKSTLSTPVNAFQSATPIEG-IEAQQPLTETTPTADAAHSADCQCMV--CTVCNWVY 453 Query: 317 DQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 424 D AKG+P+ + G +A VPD + CP C + F Sbjct: 454 DPAKGEPNQGIEVGTTWADVPDYFLCPECHLGKDVF 489
>RUBR1_PSEOL (P12692) Rubredoxin 1| Length = 132 Score = 44.7 bits (104), Expect = 1e-04 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = +2 Query: 287 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTC 403 ++C C Y+YD+ KG+P P + +P DW CP C Sbjct: 4 YQCPDCQYIYDENKGEPHEGFHPNTSWNDIPKDWACPDC 42
>RUBR_PEPAS (P00267) Rubredoxin (Rd)| Length = 53 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/46 (43%), Positives = 25/46 (54%) Frame = +2 Query: 290 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 427 EC CGY+YD A P P G F V ++W CP CGA + F+ Sbjct: 5 ECTLCGYIYDPALVGPDTPDQDGA-FEDVSENWVCPLCGAGKEDFE 49
>CBIO2_STRAW (Q82B58) Putative cobalt import ATP-binding protein cbiO 2| Length = 561 Score = 34.7 bits (78), Expect = 0.13 Identities = 21/58 (36%), Positives = 29/58 (50%) Frame = +2 Query: 119 DKPLDTALETKQEDAAGVGVGDLTTPLPGELDAEEDVPKLDPRRFEEQFAVLNTGVHE 292 D+P+ T +Q+ A +G + TP P L +E LDP EE AVL VH+ Sbjct: 136 DRPISTLSGGQQQRVA---IGSVLTPHPKVLVLDEPTSALDPAAAEEVLAVLQRLVHD 190
>CBIO1_STRCO (Q9KXJ6) Putative cobalt import ATP-binding protein cbiO 1| Length = 563 Score = 32.3 bits (72), Expect = 0.65 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = +2 Query: 170 VGVGDLTTPLPGELDAEEDVPKLDPRRFEEQFAVLNTGVHE 292 V +G + TP P L +E LDP EE AVL VH+ Sbjct: 150 VAIGSVLTPHPDVLVLDEPTSALDPAAAEEVLAVLQRLVHD 190
>CLCN7_HUMAN (P51798) Chloride channel protein 7 (ClC-7)| Length = 805 Score = 32.3 bits (72), Expect = 0.65 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = +1 Query: 295 PVLRLPVRPGQGRPVLPGAPGAAVRQGP 378 P+LR RPG G P+L GA A RQ P Sbjct: 22 PLLRRTARPGGGTPLLNGAGPGAARQSP 49
>RL44_METJA (P54027) 50S ribosomal protein L44E| Length = 94 Score = 32.3 bits (72), Expect = 0.65 Identities = 22/81 (27%), Positives = 33/81 (40%) Frame = +2 Query: 89 TLHSVDVSKDDKPLDTALETKQEDAAGVGVGDLTTPLPGELDAEEDVPKLDPRRFEEQFA 268 T+H V+ +K KP + +Q G G PLP D + V K+D R Sbjct: 18 TIHIVEKAKKGKPSELTWGQRQFRRVTAGYGGFPRPLP---DRSKPVKKIDLR------- 67 Query: 269 VLNTGVHECRSCGYLYDQAKG 331 +C CG ++ +A G Sbjct: 68 ------FKCTECGKMHTKANG 82
>YHL1_EBV (P03181) Hypothetical protein BHLF1| Length = 660 Score = 31.2 bits (69), Expect = 1.4 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = +1 Query: 310 PVRPGQGRPVLPGAPGAAVRQGPG 381 P P GRP PGAPG GPG Sbjct: 553 PSGPTGGRPAAPGAPGTPAAPGPG 576 Score = 31.2 bits (69), Expect = 1.4 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = +1 Query: 310 PVRPGQGRPVLPGAPGAAVRQGPG 381 P P GRP PGAPG GPG Sbjct: 428 PSGPTGGRPAAPGAPGTPAAPGPG 451 Score = 31.2 bits (69), Expect = 1.4 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = +1 Query: 310 PVRPGQGRPVLPGAPGAAVRQGPG 381 P P GRP PGAPG GPG Sbjct: 303 PSGPTGGRPAAPGAPGTPAAPGPG 326 Score = 31.2 bits (69), Expect = 1.4 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = +1 Query: 310 PVRPGQGRPVLPGAPGAAVRQGPG 381 P P GRP PGAPG GPG Sbjct: 178 PSGPTGGRPAAPGAPGTPAAPGPG 201
>CBPA_DICDI (P35085) Calcium-binding protein| Length = 467 Score = 30.4 bits (67), Expect = 2.5 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +1 Query: 310 PVRPGQGRPVLPGAPGAAVRQGPGRLAVPDVRRG 411 P +PGQ P PGAPG Q PG+ P + G Sbjct: 78 PQQPGQYPPQQPGAPGQYPPQQPGQPGYPPQQPG 111 Score = 28.9 bits (63), Expect = 7.2 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +1 Query: 295 PVLRLPVRPGQGRPVLPGAPGAAVRQGPGR 384 P LP PG +P PGAPG Q PG+ Sbjct: 54 PGSNLPPYPGTQQPGAPGAPGQYPPQQPGQ 83
>PKL_ARATH (Q9S775) CHD3-type chromatin remodeling factor PICKLE (EC 3.6.1.-)| (Protein GYMNOS) Length = 1384 Score = 30.4 bits (67), Expect = 2.5 Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 9/73 (12%) Frame = +2 Query: 212 DAEEDVPKLDPRRFEEQFAVLNTGVHE--CRSCGYLYDQAKGDP-SYP------VPPGLP 364 D ++ VPK D R FE+ A++ T E C++CG + + +Y VPP L Sbjct: 24 DDDDFVPKKD-RTFEQVEAIVRTDAKENACQACGESTNLVSCNTCTYAFHAKCLVPP-LK 81 Query: 365 FAKVPDDWRCPTC 403 A V ++WRCP C Sbjct: 82 DASV-ENWRCPEC 93
>ULK1_HUMAN (O75385) Serine/threonine-protein kinase ULK1 (EC 2.7.11.1)| (Unc-51-like kinase 1) Length = 1050 Score = 30.4 bits (67), Expect = 2.5 Identities = 16/46 (34%), Positives = 18/46 (39%) Frame = -1 Query: 380 PGPWRTAAPGAPGRTGLPWPXXXXXXXXXXRAPPCSAPRTAPRTGG 243 P P P PG +G P P P SAP +PRT G Sbjct: 504 PSPQVGTIPERPGWSGTPSPQGAEMRGGRSPRPGSSAPEHSPRTSG 549
>NUCG_BOVIN (P38447) Endonuclease G, mitochondrial precursor (EC 3.1.30.-)| (Endo G) Length = 299 Score = 30.0 bits (66), Expect = 3.2 Identities = 15/29 (51%), Positives = 15/29 (51%) Frame = +1 Query: 304 RLPVRPGQGRPVLPGAPGAAVRQGPGRLA 390 RLPV P LP PGA GPG LA Sbjct: 39 RLPVLPVAAAAGLPAVPGAPAGGGPGELA 67
>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor| Length = 1685 Score = 30.0 bits (66), Expect = 3.2 Identities = 17/30 (56%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = +1 Query: 319 PG-QGRPVLPGAPGAAVRQGPGRLAVPDVR 405 PG QG P LPG PGAAV PG P R Sbjct: 376 PGIQGPPGLPGPPGAAVMGPPGPPGFPGER 405
>FMT_THETH (P43523) Methionyl-tRNA formyltransferase (EC 2.1.2.9)| Length = 305 Score = 30.0 bits (66), Expect = 3.2 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = +1 Query: 277 HGGARVPVLRLPVRPGQGRPVLPGAPGAAVRQGPGRLAV 393 H G RV LRL PG+G PG R GP +AV Sbjct: 233 HRGRRVKALRLRPEPGEGE------PGVVARVGPEGVAV 265
>FMT_THET2 (Q72H32) Methionyl-tRNA formyltransferase (EC 2.1.2.9)| Length = 305 Score = 30.0 bits (66), Expect = 3.2 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = +1 Query: 277 HGGARVPVLRLPVRPGQGRPVLPGAPGAAVRQGPGRLAV 393 H G RV LRL PG+G PG R GP +AV Sbjct: 233 HRGRRVKALRLRPEPGEGE------PGVVARVGPEGVAV 265
>MEF2B_HUMAN (Q02080) Myocyte-specific enhancer factor 2B (Serum response| factor-like protein 2) (XMEF2) (RSRFR2) Length = 365 Score = 30.0 bits (66), Expect = 3.2 Identities = 14/45 (31%), Positives = 17/45 (37%) Frame = -1 Query: 380 PGPWRTAAPGAPGRTGLPWPXXXXXXXXXXRAPPCSAPRTAPRTG 246 PGPW++ P G PWP P +P TA G Sbjct: 307 PGPWQSLCGLGPPCAGCPWPTAGPGRRSPGGTSPERSPGTARARG 351
>HPRK_LEPIN (Q8F3J9) HPr kinase/phosphorylase (EC 2.7.11.-) (EC 2.7.4.-)| (HPrK/P) (HPr(Ser) kinase/phosphorylase) Length = 321 Score = 29.6 bits (65), Expect = 4.2 Identities = 9/20 (45%), Positives = 17/20 (85%) Frame = +1 Query: 283 GARVPVLRLPVRPGQGRPVL 342 G ++P++R+PVRPG+ P++ Sbjct: 260 GVQIPLIRVPVRPGRNIPII 279
>HPRK_LEPIC (Q72S40) HPr kinase/phosphorylase (EC 2.7.11.-) (EC 2.7.4.-)| (HPrK/P) (HPr(Ser) kinase/phosphorylase) Length = 321 Score = 29.6 bits (65), Expect = 4.2 Identities = 9/20 (45%), Positives = 17/20 (85%) Frame = +1 Query: 283 GARVPVLRLPVRPGQGRPVL 342 G ++P++R+PVRPG+ P++ Sbjct: 260 GVQIPLIRVPVRPGRNIPII 279
>ZDHC8_PANTR (Q2THX0) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 8) (DHHC-8) Length = 765 Score = 29.6 bits (65), Expect = 4.2 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +2 Query: 116 DDKPLDTALETKQEDAAGVGVGDLTTPLPGELDAEEDVPKLDP 244 D+KPLD + AG DL TP PG ++ V + P Sbjct: 307 DEKPLDLGPPLPPKIEAGTFSSDLQTPRPGSAESALSVQRTSP 349
>ZDHC8_HUMAN (Q9ULC8) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 8) (DHHC-8) (Zinc finger protein 378) Length = 765 Score = 29.6 bits (65), Expect = 4.2 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +2 Query: 116 DDKPLDTALETKQEDAAGVGVGDLTTPLPGELDAEEDVPKLDP 244 D+KPLD + AG DL TP PG ++ V + P Sbjct: 307 DEKPLDLGPPLPPKIEAGTFSSDLQTPRPGSAESALSVQRTSP 349
>YNB3_SCHPO (Q9USS7) Hypothetical protein C4.03c in chromosome II| Length = 891 Score = 29.3 bits (64), Expect = 5.5 Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 1/91 (1%) Frame = +2 Query: 158 DAAGVGVGDLTTPLPGELDAEEDVPKLDPRRFEEQFAVLNTGVHECRSC-GYLYDQAKGD 334 +A+G+ +G + P E VP +D N+ C+ C GY Sbjct: 180 NASGIPLGMIVQPFAELRPDEAPVPVVDNT---------NSNPPRCKKCRGY-------- 222 Query: 335 PSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 427 + P + F W C CG+ SF D Sbjct: 223 ----INPFIQFTMASSKWTCNLCGSENSFND 249
>YHU6_YEAST (P38845) Hypothetical 51.1 kDa protein in DCD1-MRPL6 intergenic| region Length = 465 Score = 29.3 bits (64), Expect = 5.5 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = +2 Query: 125 PLDTALETKQEDAAGVGVGDLTTPLPGELDAEEDVPKLDPRRFEEQ 262 P+D + +T Q + G G + P PGE+ ++ +D R E+ Sbjct: 202 PIDQSADTTQSNGIIGGPGPVLVPNPGEIKEFTEIRDVDARELNER 247
>POLG_BVDVN (P19711) Genome polyprotein [Contains: N-terminal protease (EC| 3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Nonstructural protein 2 Length = 3988 Score = 28.9 bits (63), Expect = 7.2 Identities = 9/31 (29%), Positives = 17/31 (54%) Frame = +2 Query: 257 EQFAVLNTGVHECRSCGYLYDQAKGDPSYPV 349 +Q + C+ CGY + +++G P YP+ Sbjct: 885 DQLLYKGGSIESCKWCGYQFKESEGLPHYPI 915
>VPS27_YEAST (P40343) Vacuolar protein sorting-associated protein VPS27| Length = 622 Score = 28.9 bits (63), Expect = 7.2 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +2 Query: 257 EQFAVLNTGVHECRSCGYLYDQAKGDPSYPVP 352 ++F++LN H CRSCG ++ Q S P+P Sbjct: 181 KKFSLLNRK-HHCRSCGGVFCQEHSSNSIPLP 211
>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 699 Score = 28.9 bits (63), Expect = 7.2 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = +1 Query: 322 GQGRPVLPGAPGAAVRQGPGRLAVP 396 G G+P LPGAPG A GP L P Sbjct: 205 GVGQPGLPGAPGQAGAPGPPGLPGP 229
>MARH4_HUMAN (Q9P2E8) Membrane-associated RING finger protein 4| (Membrane-associated RING-CH protein IV) (MARCH-IV) (RING finger protein 174) Length = 410 Score = 28.9 bits (63), Expect = 7.2 Identities = 14/34 (41%), Positives = 15/34 (44%) Frame = +2 Query: 335 PSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKS 436 P P PP LP + V DDW P S S S Sbjct: 102 PPVPPPPPLPPSSVEDDWGGPATEPPASLLSSAS 135
>OPAP_DROME (P23488) Male-specific opa-containing protein precursor (Protein| dromsopa) Length = 83 Score = 28.9 bits (63), Expect = 7.2 Identities = 17/50 (34%), Positives = 20/50 (40%) Frame = -1 Query: 386 NRPGPWRTAAPGAPGRTGLPWPXXXXXXXXXXRAPPCSAPRTAPRTGGGQ 237 N P P AAP A P APP +AP+ AP G G+ Sbjct: 26 NLPAPEAAAAPPAAAAA----PPAAAAAPPAPPAPPAAAPQAAPAGGSGR 71
>ISPH_GEOSL (Q749Y8) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 282 Score = 28.5 bits (62), Expect = 9.4 Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 22/92 (23%) Frame = -2 Query: 301 GPALVHPRVQHRELLLEPAGVKL---------------RHVLLRVQLPRQWRRQVADADA 167 GP + P+V R LE GVK+ H + +L RRQ+ DA Sbjct: 36 GPIIHSPQVVQR---LEGMGVKVLSDLEGIGNGTVIIRSHGVTSAELEDAVRRQLEVVDA 92 Query: 166 GCIFLFGLERRVQRL-------VVLGDVDGVE 92 C F+ + V+RL VV+GD D E Sbjct: 93 TCPFVKKAQEHVKRLSHDGYTVVVVGDADHPE 124
>CUC3A_HAECO (P16253) Cuticle collagen 3A3| Length = 295 Score = 28.5 bits (62), Expect = 9.4 Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 1/44 (2%) Frame = -1 Query: 383 RPG-PWRTAAPGAPGRTGLPWPXXXXXXXXXXRAPPCSAPRTAP 255 RPG P R APG PG GLP P PPC+ P Sbjct: 108 RPGRPGRPGAPGLPGVPGLPPP---DGSCEPVSIPPCAECPAGP 148
>ZDHC8_MOUSE (Q5Y5T5) Probable palmitoyltransferase ZDHHC8 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 8) (DHHC-8) Length = 762 Score = 28.5 bits (62), Expect = 9.4 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +2 Query: 116 DDKPLDTALETKQEDAAGVGVGDLTTPLPGELDAEEDVPKLDP 244 D+KPLD + AG DL TP PG ++ V + P Sbjct: 305 DEKPLDLGPPLPPKIEAGTFGRDLKTPRPGSAESALSVQRTSP 347
>COL13_CAEEL (P20631) Cuticle collagen 13 precursor| Length = 316 Score = 28.5 bits (62), Expect = 9.4 Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 4/46 (8%) Frame = -1 Query: 380 PGPWRTA----APGAPGRTGLPWPXXXXXXXXXXRAPPCSAPRTAP 255 PGP A APGAPG+ G P C PRTAP Sbjct: 271 PGPQGDAGAPGAPGAPGQAGA--PGQDGESGSEGACDHCPPPRTAP 314
>COL12_CAEEL (P20630) Cuticle collagen 12 precursor| Length = 316 Score = 28.5 bits (62), Expect = 9.4 Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 4/46 (8%) Frame = -1 Query: 380 PGPWRTA----APGAPGRTGLPWPXXXXXXXXXXRAPPCSAPRTAP 255 PGP A APGAPG+ G P C PRTAP Sbjct: 271 PGPQGDAGAPGAPGAPGQAGA--PGQDGESGSEGACDHCPPPRTAP 314
>POLG_BVDVS (Q01499) Genome polyprotein [Contains: N-terminal protease (EC| 3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Nonstructural protein 2 Length = 3898 Score = 28.5 bits (62), Expect = 9.4 Identities = 8/22 (36%), Positives = 15/22 (68%) Frame = +2 Query: 284 VHECRSCGYLYDQAKGDPSYPV 349 + C+ CGY + +++G P YP+ Sbjct: 894 IESCKWCGYKFQKSEGLPHYPI 915
>DPOE_ASPFU (Q4WXH8) DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7)| (DNA polymerase II subunit A) Length = 2230 Score = 28.5 bits (62), Expect = 9.4 Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 2/75 (2%) Frame = +2 Query: 248 RFEEQFAVLNTGVHECRSCGYL--YDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSF 421 RFE A L C +C + D + + P P P WRCP C Q+ Sbjct: 2086 RFENPGASLKLPELSCNACCLIRDLDLCRDEDVLPEMGSDPNKAAPKPWRCPFC---QTE 2142 Query: 422 FDSKSVEIAGFAQNQ 466 +D + E A Q Q Sbjct: 2143 YDRLAQEEALIGQVQ 2157
>CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor| Length = 1691 Score = 28.5 bits (62), Expect = 9.4 Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 1/30 (3%) Frame = +1 Query: 319 PG-QGRPVLPGAPGAAVRQGPGRLAVPDVR 405 PG QG P LPG PG AV PG P R Sbjct: 376 PGIQGPPGLPGPPGTAVMGPPGPPGFPGER 405
>CLPP2_GLUOX (Q5FQT4) ATP-dependent Clp protease proteolytic subunit 2 (EC| 3.4.21.92) (Endopeptidase Clp 2) Length = 223 Score = 28.5 bits (62), Expect = 9.4 Identities = 18/49 (36%), Positives = 24/49 (48%) Frame = +2 Query: 182 DLTTPLPGELDAEEDVPKLDPRRFEEQFAVLNTGVHECRSCGYLYDQAK 328 D+T P LD E D P +P E+ LN+ + E G L+DQ K Sbjct: 10 DITRMTPTRLDDEPDAP--EPETREDDNKTLNSPISELE--GRLFDQRK 54
>KPC1_ASPNG (Q00078) Protein kinase C-like (EC 2.7.11.13)| Length = 1096 Score = 28.5 bits (62), Expect = 9.4 Identities = 19/42 (45%), Positives = 19/42 (45%), Gaps = 6/42 (14%) Frame = +1 Query: 274 EHGGARVPVLRLPVRP------GQGRPVLPGAPGAAVRQGPG 381 EHGGA P RP G P PG PGAA QG G Sbjct: 361 EHGGA-------PGRPDTAGGAGSAHPSGPGGPGAAPSQGYG 395
>HHUA_HAEIN (Q48153) Hemoglobin-haptoglobin-binding protein A precursor| (Hemoglobin-haptoglobin utilization protein A) Length = 1046 Score = 28.5 bits (62), Expect = 9.4 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = +2 Query: 287 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDD 385 H + GY YD+ K DP Y +P P K+PDD Sbjct: 682 HIAFNFGYRYDRVKYDPEY-IPGKTP--KIPDD 711
>COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV)] Length = 1367 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = +1 Query: 307 LPVRPGQGRPVLPGAPGAAVRQGP 378 LP PG GRP +PG PG GP Sbjct: 1062 LPGPPGFGRPGVPGPPGPPGPPGP 1085
>GLE1_MOUSE (Q8R322) Nucleoporin GLE1 (GLE1-like protein)| Length = 699 Score = 28.5 bits (62), Expect = 9.4 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = -2 Query: 313 QVAAGPALVHPRVQHRELLLEPAGVKLRHVLLRVQ-LPRQWRRQVADADAGCIFLF 149 QV GPA P Q P G + + ++VQ QW +Q+ DA A C+ F Sbjct: 353 QVQQGPA---PPTQTSAPSPSPVGAQNEDLQVKVQDSTMQWYQQLQDASAKCVLAF 405
>FMT_THET8 (Q5SLH3) Methionyl-tRNA formyltransferase (EC 2.1.2.9)| Length = 305 Score = 28.5 bits (62), Expect = 9.4 Identities = 16/39 (41%), Positives = 18/39 (46%) Frame = +1 Query: 277 HGGARVPVLRLPVRPGQGRPVLPGAPGAAVRQGPGRLAV 393 H G RV LRL PG+G PG R GP + V Sbjct: 233 HRGQRVKALRLRPEPGEGE------PGVVARVGPEGVVV 265
>RUBH_METTH (Q50533) Putative rubredoxin| Length = 177 Score = 28.5 bits (62), Expect = 9.4 Identities = 15/53 (28%), Positives = 20/53 (37%) Frame = +2 Query: 293 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVEIAG 451 CR CGY +P G F + D W CP CG + + + G Sbjct: 4 CRICGY-----------QIPEG-EFNLLEDGWVCPRCGVGKEELQDSAEPLGG 44 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,530,227 Number of Sequences: 219361 Number of extensions: 1159191 Number of successful extensions: 7077 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 5018 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6927 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
