ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd21d12 |
|---|---|
| Clone Library Name | barley_pub |
>ETFA_HUMAN (P13804) Electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 333 Score = 100 bits (248), Expect = 3e-21 Identities = 62/166 (37%), Positives = 88/166 (53%), Gaps = 27/166 (16%) Frame = +1 Query: 46 ALRRLVSTLIIAEHEGGLVKPSSLSASSHPL---------------------------VN 144 +L R STL+IAEH + P +L+ + + Sbjct: 15 SLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIA 74 Query: 145 EVLVADSDVFAHPLAEPWAELLRSVQQKGGYSHVIASSTSFGKNLLPRAAALLDVSPVTD 324 +VLVA DV+ L E L+ + Q++ Y+H+ A +++FGKNLLPR AA L+V+P++D Sbjct: 75 KVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISD 134 Query: 325 VTAISEPWVFVRPIYAGNALCTVRYTGESPCMMSIRSTSFSLATES 462 + AI P FVR IYAGNALCTV+ E + S+R TSF A S Sbjct: 135 IIAIKSPDTFVRTIYAGNALCTVK-CDEKVKVFSVRGTSFDAAATS 179
>ETFA_PONPY (Q5RC31) Electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 333 Score = 99.8 bits (247), Expect = 4e-21 Identities = 62/166 (37%), Positives = 88/166 (53%), Gaps = 27/166 (16%) Frame = +1 Query: 46 ALRRLVSTLIIAEHEGGLVKPSSLSASSHPL---------------------------VN 144 +L R STL+IAEH + P +L+ + + Sbjct: 15 SLLRFQSTLVIAEHADDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIA 74 Query: 145 EVLVADSDVFAHPLAEPWAELLRSVQQKGGYSHVIASSTSFGKNLLPRAAALLDVSPVTD 324 +VLVA DV+ L E L+ + Q++ Y+H+ A +++FGKNLLPR AA L+V+P++D Sbjct: 75 KVLVAQHDVYRGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISD 134 Query: 325 VTAISEPWVFVRPIYAGNALCTVRYTGESPCMMSIRSTSFSLATES 462 + AI P FVR IYAGNALCTV+ E + S+R TSF A S Sbjct: 135 IIAIKSPDTFVRTIYAGNALCTVK-CDEKVKVFSVRGTSFEAAATS 179
>ETFA_MACFA (Q8HXY0) Electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 333 Score = 99.4 bits (246), Expect = 5e-21 Identities = 61/163 (37%), Positives = 86/163 (52%), Gaps = 27/163 (16%) Frame = +1 Query: 55 RLVSTLIIAEHEGGLVKPSSLSASSHPL---------------------------VNEVL 153 R STL+IAEH + P +L+ + + +VL Sbjct: 18 RFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIAKVL 77 Query: 154 VADSDVFAHPLAEPWAELLRSVQQKGGYSHVIASSTSFGKNLLPRAAALLDVSPVTDVTA 333 VA D + LAE L+ + Q++ Y+H+ A +++FGKNLLPR AA L+V+P++D+ A Sbjct: 78 VAQHDAYRGLLAEDLTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIA 137 Query: 334 ISEPWVFVRPIYAGNALCTVRYTGESPCMMSIRSTSFSLATES 462 I P FVR IYAGNALCTV+ E + S+R TSF A S Sbjct: 138 IKSPDTFVRTIYAGNALCTVK-CDEKVKVFSVRGTSFEAAATS 179
>ETFA_MOUSE (Q99LC5) Electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 333 Score = 95.5 bits (236), Expect = 7e-20 Identities = 62/166 (37%), Positives = 85/166 (51%), Gaps = 27/166 (16%) Frame = +1 Query: 46 ALRRLVSTLIIAEHEGGLVKPSSLSASSHPL---------------------------VN 144 +L R STL+IAEH + P +L+ + V Sbjct: 15 SLLRFQSTLVIAEHANDSLAPITLNTITAAGRLGGEVSCLVAGTKCDKVVQDLCKVAGVA 74 Query: 145 EVLVADSDVFAHPLAEPWAELLRSVQQKGGYSHVIASSTSFGKNLLPRAAALLDVSPVTD 324 +VLVA D + L E L+ Q++ Y+H+ A +++FGKNLLPR AA L+V+PV+D Sbjct: 75 KVLVAQHDAYKGLLPEELTPLILETQKQFSYTHICAGASAFGKNLLPRVAAKLNVAPVSD 134 Query: 325 VTAISEPWVFVRPIYAGNALCTVRYTGESPCMMSIRSTSFSLATES 462 + I P FVR IYAGNALCTV+ E + S+R TSF A S Sbjct: 135 IIEIKSPDTFVRTIYAGNALCTVK-CDEKVKVFSVRGTSFEAAATS 179
>ETFA_RAT (P13803) Electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 333 Score = 94.7 bits (234), Expect = 1e-19 Identities = 61/166 (36%), Positives = 85/166 (51%), Gaps = 27/166 (16%) Frame = +1 Query: 46 ALRRLVSTLIIAEHEGGLVKPSSLSASSHPL---------------------------VN 144 +L R STL+IAEH + P +L+ + V Sbjct: 15 SLLRFQSTLVIAEHANDSLAPITLNTITAAGRLGGEVSCLVAGTKCDKVVQDLCKVAGVA 74 Query: 145 EVLVADSDVFAHPLAEPWAELLRSVQQKGGYSHVIASSTSFGKNLLPRAAALLDVSPVTD 324 +VLVA D + L E L+ Q++ Y+H++A +++FGKNLLPR AA L+V+PV+D Sbjct: 75 KVLVAQHDAYKGLLPEELTPLILETQKQFSYTHIVAGASAFGKNLLPRVAAKLNVAPVSD 134 Query: 325 VTAISEPWVFVRPIYAGNALCTVRYTGESPCMMSIRSTSFSLATES 462 + I P FVR IYA NALCTV+ E + S+R TSF A S Sbjct: 135 IIEIKSPDTFVRTIYAANALCTVK-CDEKVKVFSVRGTSFEAAAAS 179
>ETFA_CRYNE (Q8J0W1) Probable electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 346 Score = 93.2 bits (230), Expect = 3e-19 Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 31/176 (17%) Frame = +1 Query: 55 RLVSTLIIAEHEGGLVKPSSLSA---------SSHPLV--------------------NE 147 RLVS+L+ EH+ G + +SLSA +H L+ ++ Sbjct: 23 RLVSSLVFLEHKAGKLNEASLSAVTAAKTLGNDTHGLLVGTKSEIENVLDRTKEIKDLSK 82 Query: 148 VLVADSDVFAHPLAEPWAELLRSVQQKGGYSHVIASSTSFGKNLLPRAAALLDVSPVTDV 327 + +A SD ++H LAEP A LL S+ SH+ A+ T+ GKN+ PR A LLD S + D+ Sbjct: 83 IYLATSDTYSHSLAEPLASLLASIASAKDVSHIFAAHTAVGKNIFPRLAGLLDTSLIADI 142 Query: 328 TAI-SEPWVFVRPIYAGNALCTVRYT-GESPCMMSIRSTSFSLATESMSETKVAPI 489 A+ S F RPIYAGNA+ T++ + +S ++++RST+F A + V + Sbjct: 143 IALESSGDTFTRPIYAGNAVLTIKSSPKDSVKVVTVRSTAFDKAAVANGSAAVEDV 198
>ETFA_CRYGA (Q5Y223) Probable electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 346 Score = 86.3 bits (212), Expect = 4e-17 Identities = 58/164 (35%), Positives = 89/164 (54%), Gaps = 31/164 (18%) Frame = +1 Query: 55 RLVSTLIIAEHEGGLVKPSSLSA---------SSHPLV--------------------NE 147 RLVS+L+ EH+ G + +SLSA +H L+ ++ Sbjct: 23 RLVSSLVFLEHKAGKLSEASLSAVTAAKTLGNDTHGLLVGTKSEIENALDRAKEIKGLSK 82 Query: 148 VLVADSDVFAHPLAEPWAELLRSVQQKGGYSHVIASSTSFGKNLLPRAAALLDVSPVTDV 327 + +A SD ++H LAE A LL S+ SH+ A+ T+ GKN+ PR A LLD S + D+ Sbjct: 83 IYLARSDSYSHSLAEALASLLASIVSAKDVSHLFAAHTAVGKNVFPRLAGLLDSSLIADI 142 Query: 328 TAI-SEPWVFVRPIYAGNALCTVRYT-GESPCMMSIRSTSFSLA 453 A+ S F RPIYAGNA+ T++ + +S ++++RST+F A Sbjct: 143 IALESSGDTFTRPIYAGNAVLTIKSSPKDSVKIVTVRSTAFDKA 186
>ETFA_CRYNV (Q8J112) Probable electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 346 Score = 85.5 bits (210), Expect = 7e-17 Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 31/164 (18%) Frame = +1 Query: 55 RLVSTLIIAEHEGGLVKPSSLSA---------SSHPLV--------------------NE 147 RL S+L++ EH+ G + +SLSA +H ++ ++ Sbjct: 23 RLASSLVLLEHKAGRLNDASLSAVTAAKATGNDTHGILVGSMAEVEGVLKEAKKIKDLSK 82 Query: 148 VLVADSDVFAHPLAEPWAELLRSVQQKGGYSHVIASSTSFGKNLLPRAAALLDVSPVTDV 327 + +A SD ++H LAE A LL S+ SHV A+ T+ GKN+ PR A +LD S V D+ Sbjct: 83 IYLATSDAYSHSLAEALAPLLASIVPTKDVSHVFAAHTAVGKNVFPRLAGMLDSSLVADI 142 Query: 328 TAIS-EPWVFVRPIYAGNALCTVRYT-GESPCMMSIRSTSFSLA 453 A+ F RPIYAGNA+ TV+ + +S ++++RST+F A Sbjct: 143 IALDPSRGTFTRPIYAGNAVLTVKSSPKDSVKIVTVRSTAFDKA 186
>ETFA_PARDE (P38974) Electron transfer flavoprotein alpha-subunit (Alpha-ETF)| (Electron transfer flavoprotein large subunit) (ETFLS) Length = 307 Score = 85.5 bits (210), Expect = 7e-17 Identities = 52/123 (42%), Positives = 77/123 (62%) Frame = +1 Query: 91 GGLVKPSSLSASSHPLVNEVLVADSDVFAHPLAEPWAELLRSVQQKGGYSHVIASSTSFG 270 G K ++ A+ V +VLVA+ ++ H LAEP A L+ V G YSH+ A +T+ Sbjct: 37 GASAKAAAEEAAKIAGVAKVLVAEDALYGHRLAEPTAALI--VGLAGDYSHIAAPATTDA 94 Query: 271 KNLLPRAAALLDVSPVTDVTAISEPWVFVRPIYAGNALCTVRYTGESPCMMSIRSTSFSL 450 KN++PR AALLDV ++DV+AI + F RPIYAGNA+ V+ + ++ + +IR+ SF Sbjct: 95 KNVMPRVAALLDVMVLSDVSAILDADTFERPIYAGNAIQVVK-SKDAKKVFTIRTASFDA 153 Query: 451 ATE 459 A E Sbjct: 154 AGE 156
>ETFA_BRAJA (P53573) Electron transfer flavoprotein alpha-subunit (Alpha-ETF)| (Electron transfer flavoprotein large subunit) (ETFLS) Length = 314 Score = 80.9 bits (198), Expect = 2e-15 Identities = 45/110 (40%), Positives = 74/110 (67%) Frame = +1 Query: 139 VNEVLVADSDVFAHPLAEPWAELLRSVQQKGGYSHVIASSTSFGKNLLPRAAALLDVSPV 318 V +VL+AD ++AH LAEP A L+ S+ Y ++A +TS KN++PR AALLDV V Sbjct: 54 VKKVLLADGALYAHDLAEPLAALIVSLAPS--YDAIVAPATSRFKNVMPRVAALLDVMQV 111 Query: 319 TDVTAISEPWVFVRPIYAGNALCTVRYTGESPCMMSIRSTSFSLATESMS 468 +++ + P + RPIYAGNA+ TV+ + ++ ++++R+++F+ A E S Sbjct: 112 SEIIKVVAPDTYERPIYAGNAIQTVK-SKDAKKVITVRTSTFAAAGEGGS 160
>ETFA_YEAST (Q12480) Probable electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 344 Score = 77.8 bits (190), Expect = 1e-14 Identities = 40/97 (41%), Positives = 59/97 (60%) Frame = +1 Query: 184 LAEPWAELLRSVQQKGGYSHVIASSTSFGKNLLPRAAALLDVSPVTDVTAISEPWVFVRP 363 L E LL + + G YSH + S++S GK++LPR ALLDV PV +VT I +P F+RP Sbjct: 95 LPEQLTPLLVKLLKGGDYSHFVVSNSSVGKSVLPRVGALLDVQPVCEVTVIKDPKTFIRP 154 Query: 364 IYAGNALCTVRYTGESPCMMSIRSTSFSLATESMSET 474 IYAGN + T+ E ++ IR+++F E ++ Sbjct: 155 IYAGNIISTIECQAEKK-LLIIRASAFPPIAEGSMDS 190
>ETFA_CAEEL (Q93615) Probable electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 332 Score = 73.6 bits (179), Expect = 3e-13 Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 27/165 (16%) Frame = +1 Query: 55 RLVSTLIIAEHEGGLVKPSSLSA--SSHPLVNE-------------------------VL 153 RL STL++AEH+ + P +L+A ++ L NE VL Sbjct: 19 RLNSTLVVAEHDETKLAPITLNAITAASKLGNEVSVLVTGANATKVAEQVAKVNGVKRVL 78 Query: 154 VADSDVFAHPLAEPWAELLRSVQQKGGYSHVIASSTSFGKNLLPRAAALLDVSPVTDVTA 333 VA + + L E A ++ + Q++ ++ + A S++FG+ ++PR AA LDVS ++DVT Sbjct: 79 VAQDEKLKNNLPERVAPVILASQKQFNFTAITAGSSAFGRGVIPRVAAKLDVSSISDVTE 138 Query: 334 ISEPWVFVRPIYAGNALCTVRYTGESPCMMSIRSTSFSLATESMS 468 + F R +YAGNA+ V+ T +++ R TSF A E S Sbjct: 139 VHSADSFTRTLYAGNAVKKVKSTAPIK-LLTFRGTSFEPAKEGGS 182
>ETFA_SCHPO (P78790) Probable electron transfer flavoprotein alpha-subunit,| mitochondrial precursor (Alpha-ETF) Length = 341 Score = 67.0 bits (162), Expect = 3e-11 Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 28/165 (16%) Frame = +1 Query: 52 RRLVSTLIIAEHEGGLVKPSSLSA----------------------------SSHPLVNE 147 R S L + EH+GG + P+SLSA S + + Sbjct: 25 RHWFSVLTLLEHQGGNLSPASLSAVEAAKRTGGDVFGFVIGKDSSQISQKVAKSVNDLKK 84 Query: 148 VLVADSDVFAHPLAEPWAELLRSVQQKGGYSHVIASSTSFGKNLLPRAAALLDVSPVTDV 327 V+ ++ + H + + A +L +K SHV ++ ++ GK ++PR AA+ DV ++D+ Sbjct: 85 VIYVENPSYEHNIPDQIANVLFENVKKNEISHVFSAHSTVGKGVMPRLAAMFDVMQISDI 144 Query: 328 TAISEPWVFVRPIYAGNALCTVRYTGESPCMMSIRSTSFSLATES 462 + FVRP YAGN TV T + ++++R+++F A S Sbjct: 145 IGVVSADTFVRPTYAGNVNVTVS-TKDPIKIVTVRASAFDAAPSS 188
>ETFA_BACSU (P94551) Electron transfer flavoprotein alpha-subunit (Alpha-ETF)| (Electron transfer flavoprotein large subunit) (ETFLS) Length = 325 Score = 44.3 bits (103), Expect = 2e-04 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 3/87 (3%) Frame = +1 Query: 130 HPLVNEVLVADSDVFAHPLAEPWAELLRSVQQKGGYSHVIASSTSFGKNLLPRAAALLD- 306 H ++VL A+ A+ +++++R V ++ VI T+ GK+L P+ AA L Sbjct: 54 HYGADKVLTAEDPKLKTYTADGYSQVMRGVIEQENPDSVIFGHTAMGKDLSPKLAARLQT 113 Query: 307 --VSPVTDVTAISEPWVFVRPIYAGNA 381 +S DV+ VF RPIY+G A Sbjct: 114 GLISDAIDVSVTGGNVVFTRPIYSGKA 140
>FIXB_CLOSA (P53578) Protein fixB| Length = 334 Score = 43.5 bits (101), Expect = 3e-04 Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 5/121 (4%) Frame = +1 Query: 142 NEVLVADSDVFAHPLAEPWAELLRSVQQKGGYSHVIASSTSFGKNLLPRAAALLDVSPVT 321 +EVLVAD+ H + + +++ + + + +T G++L PR AA L+ Sbjct: 63 DEVLVADNKDLQHYTTDAYTKVICDLANERKPGILFVGATFIGRDLGPRVAARLNTGLTA 122 Query: 322 DVTAI-----SEPWVFVRPIYAGNALCTVRYTGESPCMMSIRSTSFSLATESMSETKVAP 486 D T+I + + RP + GN + T+ P M ++R F + KV Sbjct: 123 DCTSIDVEVENGDLLATRPAFGGNLMATIACPEHRPQMATVRPGVFEKVNTDGANCKVEK 182 Query: 487 I 489 + Sbjct: 183 V 183
>ETFA_CLOAB (P52039) Electron transfer flavoprotein alpha-subunit (Alpha-ETF)| (Electron transfer flavoprotein large subunit) (ETFLS) Length = 336 Score = 42.7 bits (99), Expect = 5e-04 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 5/106 (4%) Frame = +1 Query: 142 NEVLVADSDVFAHPLAEPWAELLRSVQQKGGYSHVIASSTSFGKNLLPRAAALLDVSPVT 321 ++VL AD+++ AH + +A+++ + + + +T G++L PR AA L Sbjct: 64 DKVLAADNELLAHFSTDGYAKVICDLVNERKPEILFIGATFIGRDLGPRIAARLSTGLTA 123 Query: 322 DVTAI-----SEPWVFVRPIYAGNALCTVRYTGESPCMMSIRSTSF 444 D T++ + + RP + GN + T+ + P M ++R F Sbjct: 124 DCTSLDIDVENRDLLATRPAFGGNLIATIVCSDHRPQMATVRPGVF 169
>ETFA_CLOTS (P71153) Electron transfer flavoprotein alpha-subunit (Alpha-ETF)| (Electron transfer flavoprotein large subunit) (ETFLS) Length = 330 Score = 37.4 bits (85), Expect = 0.022 Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 4/99 (4%) Frame = +1 Query: 148 VLVADSDVFAHPLAEPWAELLRSVQQKGGYSHVIASSTSFGKNLLPRAAALLDVSPVTDV 327 V V D+ + ++ E +A+ + + ++ ++ +T G++L PR A+ L D Sbjct: 64 VYVVDNPLLSNYTTEGYAKAISELAKEYKPEVILYGATFIGRDLAPRIASRLMTGLTADC 123 Query: 328 TA--ISEPWVFV--RPIYAGNALCTVRYTGESPCMMSIR 432 T I E + + RP + GN + T++ + P M ++R Sbjct: 124 TGLDIDENGLLLQTRPAFGGNLMATIKCPDKRPQMSTVR 162
>FIXB_RHIME (P09819) Protein fixB| Length = 353 Score = 32.7 bits (73), Expect = 0.53 Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 4/97 (4%) Frame = +1 Query: 154 VADSDVFAHPLAEPWAELLRSVQQKGGYSHVIASSTSFGKNLLPRAAALLDVSPVTDVTA 333 + +S + AH EP+ + L + ++ +T+ G++L A L D T Sbjct: 78 LVESPLLAHYRNEPFTKALTDLVLANKPEILLLGATTLGRDLAGSVATTLKTGLTADCTE 137 Query: 334 IS----EPWVFVRPIYAGNALCTVRYTGESPCMMSIR 432 ++ RP + G+ LCT+ P M ++R Sbjct: 138 LNVDSDGSLAATRPTFGGSLLCTIYTLKCRPQMATVR 174
>YGCQ_ECOLI (Q46907) Putative electron transfer flavoprotein subunit ygcQ| Length = 286 Score = 32.3 bits (72), Expect = 0.70 Identities = 24/82 (29%), Positives = 37/82 (45%) Frame = +1 Query: 184 LAEPWAELLRSVQQKGGYSHVIASSTSFGKNLLPRAAALLDVSPVTDVTAISEPWVFVRP 363 +AE + L Q+ V+ +FG L R A L + + VT++ P V VR Sbjct: 40 VAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRK 99 Query: 364 IYAGNALCTVRYTGESPCMMSI 429 + GNAL T + P +S+ Sbjct: 100 SHWGNALTATLQTEKRPLCLSL 121
>VG22_ICHV1 (Q00105) Hypothetical gene 22 protein| Length = 1403 Score = 32.0 bits (71), Expect = 0.91 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 5/78 (6%) Frame = -1 Query: 367 KLASQRPMVQIWQ*RP*QGRHLEEPRRVEANSSRTTSTRLSHESIHLSAARSG-----AA 203 ++ S+RP+ + + +G H+ EP+ + + R SH+ +HLS R AA Sbjct: 1237 RVPSRRPVTLLER----RGAHVAEPKPTPRVRGKRPAARHSHKRVHLSITRETLRLALAA 1292 Query: 202 RPKARLKDAQTRLNPQQE 149 P+ ++ RLN E Sbjct: 1293 GPEMSAEEIFQRLNTDME 1310
>GLR21_ARATH (O04660) Glutamate receptor 2.1 precursor (Ligand-gated ion channel| 2.1) (AtGLR3) Length = 901 Score = 30.8 bits (68), Expect = 2.0 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Frame = +1 Query: 274 NLLPRAAALLDVSPVTDVTAISEPWV-----FVRPIYAGNALCTVRYTGESPCMMSIRST 438 +++ AAA LD+ +V AI PW F+ + + + V Y+ SP + SIRS Sbjct: 80 DVVTAAAAALDLITNKEVKAILGPWTSMQAQFMIEMGQKSQVPIVTYSATSPSLASIRSQ 139 Query: 439 SFSLAT 456 F AT Sbjct: 140 YFFRAT 145
>C14AA_BACTS (Q45710) Pesticidal crystal protein cry14Aa (Insecticidal| delta-endotoxin CryXIVA(a)) (Crystaline entomocidal protoxin) (132 kDa crystal protein) Length = 1186 Score = 30.0 bits (66), Expect = 3.5 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Frame = -3 Query: 296 AAARGSKFFPNDVDEAIT*EYPPFCCTERSSSAQG-SAKGCANTSESATRTSLTNGWLDA 120 AA + SK+ + I P +C T S++ Q S AN+ +++ S TN ++A Sbjct: 429 AATQNSKYLDGETINGIGASLPGYCTTGCSATEQPFSCTSTANSYKASCNPSDTNQKINA 488 Query: 119 LREDGFTSPPSCSAMISVLTSL 54 L T+ + + VL SL Sbjct: 489 LYAFTQTNVKGSTGKLGVLASL 510
>BPA1_MOUSE (Q91ZU6) Bullous pemphigoid antigen 1, isoforms 1/2/3/4 (BPA)| (Hemidesmosomal plaque protein) (Dystonia musculorum protein) (Dystonin) Length = 7389 Score = 29.3 bits (64), Expect = 5.9 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = -3 Query: 179 CANTSESATRTSLTNGWLDALREDGFTSPPSCSAMISVLTSLRSAISD 36 CA++ + + WLDA +E+ SPP SA + VL SL ++ D Sbjct: 4771 CASSHQFQQMSKDFQAWLDAKKEEQRDSPP-ISAKLDVLESLLNSQKD 4817
>YR7D_ECOLI (P21318) Hypothetical 11.0 kDa protein (ORFD) (Retron EC67)| Length = 100 Score = 29.3 bits (64), Expect = 5.9 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Frame = +1 Query: 289 AAALLDVSPVTDVTAISEPWVF--VRPIYAGNAL 384 AA + V PV DV A+SE WV +RP+ AL Sbjct: 58 AAVISHVLPVNDVMAVSEQWVMLSIRPLTPLEAL 91
>YKFA_ECOLI (P75678) Hypothetical protein ykfA| Length = 287 Score = 29.3 bits (64), Expect = 5.9 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Frame = +1 Query: 205 LLRSVQQKGGYSHVIA--SSTSFGKNLLPRAAALLDVSPVTDVTAIS-EPWVF 354 LL+ + Q Y VI T GK+ L A D+SPV+DV A + EP F Sbjct: 25 LLQQINQLTNYEPVIGIMGKTGVGKSSLCNALFAGDISPVSDVAACTREPLRF 77
>YB64_YEAST (P38314) Protein YBR214W| Length = 527 Score = 29.3 bits (64), Expect = 5.9 Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 4/76 (5%) Frame = -3 Query: 233 PPFCCTERSSSAQGSAKGCANTSESATRTSLTNGWLDALREDGFTS----PPSCSAMISV 66 PP T SS+ +A AN + SAT S NG + TS P +AM Sbjct: 398 PPESSTSASSTNLTAANTAAN-AVSATAQSSANGATPMSKSSSSTSLNSHSPLMTAMEDP 456 Query: 65 LTSLRSAISDAPPTPA 18 + SAI+ PP+PA Sbjct: 457 PSPRSSAIAIPPPSPA 472
>MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich protein SMS1)| (Protein kinase A interference protein) Length = 376 Score = 29.3 bits (64), Expect = 5.9 Identities = 31/114 (27%), Positives = 50/114 (43%) Frame = -3 Query: 359 LTKTHGSDMAVTSVTGETSRRAAARGSKFFPNDVDEAIT*EYPPFCCTERSSSAQGSAKG 180 LT + S V+ + TS + + S F +D + + ++ SSS+ S Sbjct: 71 LTSSTSSRSLVSHTSSSTSIASISFTSFSFSSDSSTSSS----SSASSDSSSSSSFSISS 126 Query: 179 CANTSESATRTSLTNGWLDALREDGFTSPPSCSAMISVLTSLRSAISDAPPTPA 18 + TSES+T ++ T+ +S PS S+ S +TS S S P T A Sbjct: 127 TSATSESSTSSTQTS----TSSSSSLSSTPSSSSSPSTITSAPST-SSTPSTTA 175
>MUC15_HUMAN (Q8N387) Mucin-15 precursor| Length = 334 Score = 29.3 bits (64), Expect = 5.9 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 11/50 (22%) Frame = +1 Query: 79 AEHEGGLVKPSSLSASSHPLVNEVL--------VADSD---VFAHPLAEP 195 AEH G +KP+S ++S PL++ + +AD D + AHP A P Sbjct: 93 AEHSLGSLKPTSTISTSPPLIHSFVSKVPWNAPIADEDLLPISAHPNATP 142
>FIXB_BRAJA (P10449) Protein fixB| Length = 369 Score = 28.9 bits (63), Expect = 7.7 Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 4/124 (3%) Frame = +1 Query: 73 IIAEHEGGLVKPSSLSASSHPLVNEVLVADSDVFAHPLAEPWAELLRSVQQKGGYSHVIA 252 ++ EG + ++L A + LV+D+ V + E + + L + ++ Sbjct: 68 VVVGPEGQHTRNAALEAFCYGADLAYLVSDN-VLSDYRNESYTKALTELVNTYKPEILLL 126 Query: 253 SSTSFGKNLLPRAAALLDVSPVTDVTAISEP----WVFVRPIYAGNALCTVRYTGESPCM 420 +T+ G++L A L D T + RP + G+ LCT+ P M Sbjct: 127 GATTLGRDLAGSVATNLSTGLTADCTTLDVDADGSLAATRPTFGGSLLCTIYTLNYRPQM 186 Query: 421 MSIR 432 ++R Sbjct: 187 ATVR 190 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.129 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,185,314 Number of Sequences: 219361 Number of extensions: 1307877 Number of successful extensions: 4046 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 3932 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4033 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
