ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd20o11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 Score = 636 bits (321), Expect = e-179 Identities = 382/401 (95%), Gaps = 6/401 (1%) Strand = Plus / Plus Query: 1 tagtacagccatggcgccccaccgngatggcctcatcggccacctccgtcgctcctttcc 60 ||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 14 tagtacagccatggc-ccccaccgtgatggcctcatcggcaacctccgtcgctcctttcc 72 Query: 61 aggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgctagcctcg 120 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 73 aggggctcaagtccaccgccggccttcccgtcagccgccgctccaacg---ctagc-tcg 128 Query: 121 gc-agcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatc 179 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 gccagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatc 188 Query: 180 aagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcag 239 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 189 aagaagttcgagaccctgtcttaccttccaccactcagcacggaggccctccttaagcag 248 Query: 240 gtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttc 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 gtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttc 308 Query: 300 atcttccgtgagcacaacgcatntnctgggtactacgatggccggnactggacaatgtgg 359 |||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||| Sbjct: 309 atcttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtgg 368 Query: 360 aagctgnctatgntcggatgcnccnacnccncacaggtgct 400 |||||| ||||| |||||||| || || || |||||||||| Sbjct: 369 aagctgcctatgttcggatgcaccgacgccacacaggtgct 409
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 Score = 634 bits (320), Expect = e-179 Identities = 377/398 (94%), Gaps = 1/398 (0%) Strand = Plus / Plus Query: 1 tagtacagccatggcgccccaccgngatggcctcatcggccacctccgtcgctcctttcc 60 ||||||||| ||||| ||| |||| ||||||||| ||||||||||||||||||||||||| Sbjct: 77 tagtacagcgatggc-ccctaccgtgatggcctcgtcggccacctccgtcgctcctttcc 135 Query: 61 aggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgctagcctcg 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 136 aggggctcaagtccaccgccggcctccccgtcagccgccgctccaacggcgctagcctcg 195 Query: 121 gcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatca 255 Query: 181 agaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcagg 240 ||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||| Sbjct: 256 agaagttcgagaccctgtcttacttgccaccgctcaccacggaggccctcctcaagcagg 315 Query: 241 tcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 tcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttca 375 Query: 301 tcttccgtgagcacaacgcatntnctgggtactacgatggccggnactggacaatgtgga 360 ||||||||||||||||||| | | | |||||||||||||||||| ||||||||||||||| Sbjct: 376 tcttccgtgagcacaacgcgtctcccgggtactacgatggccggtactggacaatgtgga 435 Query: 361 agctgnctatgntcggatgcnccnacnccncacaggtg 398 ||||| ||||| |||| ||| || || || |||||||| Sbjct: 436 agctgcctatgttcgggtgcaccgacgccacacaggtg 473
>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase, small subunit Length = 837 Score = 591 bits (298), Expect = e-166 Identities = 359/380 (94%), Gaps = 1/380 (0%) Strand = Plus / Plus Query: 1 tagtacagccatggcgccccaccgngatggcctcatcggccacctccgtcgctcctttcc 60 ||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 37 tagtacagccatggc-ccccaccgtgatggcctcgtcggccacctccgtcgctcctttcc 95 Query: 61 aggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgctagcctcg 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 96 aggggctcaagtccaccgccggcctccccgtcagccgccgctccaacggcgctagcctcg 155 Query: 121 gcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatca 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 156 gcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggtatca 215 Query: 181 agaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcagg 240 ||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||| Sbjct: 216 agaagttcgagaccctgtcctacttgccaccgctcagcacggagggcctccttaagcagg 275 Query: 241 tcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttca 300 ||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 276 tcgactacctgatccgctccaagtgggtgccctgcctcgagtttagaaaggttgggttca 335 Query: 301 tcttccgtgagcacaacgcatntnctgggtactacgatggccggnactggacaatgtgga 360 |||||||||| ||||||| || |||||||||||||||||||| ||||||||||||||| Sbjct: 336 tcttccgtgaacacaacgtatcccctgggtactacgatggccggtactggacaatgtgga 395 Query: 361 agctgnctatgntcggatgc 380 | || ||||| |||||||| Sbjct: 396 aactccctatgttcggatgc 415
>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39 ribulosebisphosphate carboxylase) clones 234 and 406 Length = 743 Score = 513 bits (259), Expect = e-142 Identities = 271/275 (98%) Strand = Plus / Plus Query: 47 cgtcgctcctttccaggggctcaagtccaccgccggccttcccgtcagccgccgctccaa 106 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1 cgtcgctcctttccaggggctcaagtccaccgccggcctccccgtcagccgccgctccaa 60 Query: 107 cggcgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcc 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggcgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcc 120 Query: 167 catcgagggcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggc 226 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 121 catcgagggcatcaagaagttcgagaccctgtcttacctgccaccgctcagcacggaggc 180 Query: 227 cctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcag 286 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cctcctcaagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcag 240 Query: 287 caaggttgggttcatcttccgtgagcacaacgcat 321 ||||||||||||||||||||||||||||||||||| Sbjct: 241 caaggttgggttcatcttccgtgagcacaacgcat 275
>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 Score = 398 bits (201), Expect = e-108 Identities = 332/379 (87%) Strand = Plus / Plus Query: 22 ccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccg 81 ||| |||||| || || |||||| ||||||| || ||||||||||||||||| ||||||| Sbjct: 78 ccgtgatggcttcgtccgccaccaccgtcgcgcccttccaggggctcaagtcgaccgccg 137 Query: 82 gccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaa 141 |||| |||||| ||||||||||| | |||| ||||| |||||||||||||||| |||| Sbjct: 138 gcctccccgtcggccgccgctccggcagcgccggcctcagcagcgtcagcaacggcggaa 197 Query: 142 ggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtctt 201 ||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 198 ggatcagatgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccctgtctt 257 Query: 202 acttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctcca 261 |||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 258 acttgccacccctctccacggaggccctcctgaagcaggtcgactacctgatccgctcca 317 Query: 262 agtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcat 321 |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||| | Sbjct: 318 agtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcacaacaact 377 Query: 322 ntnctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcn 381 | ||||||||||| || || ||||||||||||||||| || ||||| |||| ||| Sbjct: 378 cccccgggtactacgacggtcgatactggacaatgtggaagttgcctatgttcgggtgca 437 Query: 382 ccnacnccncacaggtgct 400 || || || | |||||||| Sbjct: 438 ccgacgccacgcaggtgct 456
>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small subunit (rbcS gene) Length = 518 Score = 389 bits (196), Expect = e-105 Identities = 328/375 (87%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||||||||||||||| || |||||||| |||||||| |||| |||||| Sbjct: 5 gatggcttcctcggccacctccgtcgcacccttccagggtctcaagtcgaccgacggcct 64 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||| ||||||||||||||| | |||| ||||| |||||||||||||||| |||||||| Sbjct: 65 gcccatcagccgccgctccagcagcgccggcctcagcagcgtcagcaacggcggaaggat 124 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | Sbjct: 125 caggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacct 184 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 |||||| ||| ||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 185 gccacccctctccacggaggccctcctgaagcaggtcgactacttgatccgctccaagtg 244 Query: 266 ggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnc 325 |||||| ||||||||||||||||||||||| ||| |||||||||||||||| | | Sbjct: 245 ggtgccctgcctcgagttcagcaaggttggtttcgtcttccgtgagcacaatagctcccc 304 Query: 326 tgggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccna 385 || ||||| || || || |||||||||||||||||||| ||||| |||| ||| || | Sbjct: 305 cggatactatgacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccga 364 Query: 386 cnccncacaggtgct 400 | || |||||||||| Sbjct: 365 cgccacacaggtgct 379
>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p9-1 Length = 739 Score = 385 bits (194), Expect = e-104 Identities = 230/245 (93%) Strand = Plus / Plus Query: 154 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccac 213 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 354 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacctgccaccgc 413 Query: 214 tcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgcctt 273 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 414 tcagcacggaggccctcctcaagcaggtcgactacctgatccgctccaagtgggtgcctt 473 Query: 274 gcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtact 333 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 474 gcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtact 533 Query: 334 acgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncac 393 ||||||||||| | |||||||||||||||||| ||||| |||| ||| | || || ||| Sbjct: 534 acgatggccggtattggacaatgtggaagctgcctatgttcgggtgcactgacgccacac 593 Query: 394 aggtg 398 ||||| Sbjct: 594 aggtg 598 Score = 256 bits (129), Expect = 5e-65 Identities = 140/144 (97%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 6 ccccgccgtgatggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccac 65 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 cgccggcctccccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 125 Query: 137 tggaaggatcaggtgcatgcaggt 160 |||||||||||||||||||||||| Sbjct: 126 tggaaggatcaggtgcatgcaggt 149
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 Score = 375 bits (189), Expect = e-101 Identities = 329/379 (86%) Strand = Plus / Plus Query: 22 ccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccg 81 ||| |||||| || || |||||| ||||||| || ||||||||||||||||| ||||||| Sbjct: 68 ccgtgatggcttcttccgccaccaccgtcgcgcccttccaggggctcaagtcgaccgccg 127 Query: 82 gccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaa 141 |||| ||| ||||| |||||||| | || | ||||| ||||||||||||| || |||| Sbjct: 128 gcctccccatcagctgccgctccggcagcaccggcctcagcagcgtcagcaatggcggaa 187 Query: 142 ggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtctt 201 ||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 188 ggatcagatgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccctgtctt 247 Query: 202 acttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctcca 261 |||||||||| ||| ||||||||||||| | ||||||||||||||| |||||||||||| Sbjct: 248 acttgccacccctctccacggaggccctcttgaagcaggtcgactacttgatccgctcca 307 Query: 262 agtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcat 321 |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||| | Sbjct: 308 agtgggtgccctgcctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagct 367 Query: 322 ntnctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcn 381 | ||||||||||| || || |||||||||||||||||||| ||||| |||| ||| Sbjct: 368 cccccgggtactacgacggtcgatactggacaatgtggaagctgcctatgttcgggtgca 427 Query: 382 ccnacnccncacaggtgct 400 || || || |||||||||| Sbjct: 428 ccgacgccacacaggtgct 446
>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p2-1 Length = 653 Score = 353 bits (178), Expect = 3e-94 Identities = 226/245 (92%) Strand = Plus / Plus Query: 154 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccac 213 ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||| | Sbjct: 268 tgcaggtgtggcccatcgagggcattaagaagttcgagaccctgtcctacctgccaccgc 327 Query: 214 tcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgcctt 273 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 328 tcagcacagaggccctcctcaagcaggtcgactacctgatccgctccaagtgggtgcctt 387 Query: 274 gcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtact 333 ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 388 gcctcgagttcagcaaggttgggtttatcttccgtgagcacaacgcatcccctgggtact 447 Query: 334 acgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncac 393 ||||||||||| |||||||||||||||||||| ||||| |||| ||| || || || | | Sbjct: 448 acgatggccggtactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgc 507 Query: 394 aggtg 398 ||||| Sbjct: 508 aggtg 512 Score = 248 bits (125), Expect = 1e-62 Identities = 139/144 (96%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 6 ccccgccgtgatggcctcgtcggccacctccgtcgctcctttccaggggctcaagtccac 65 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 cgccggcctccccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 125 Query: 137 tggaaggatcaggtgcatgcaggt 160 ||||||||||||| |||||||||| Sbjct: 126 tggaaggatcaggcgcatgcaggt 149
>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full insert sequence Length = 947 Score = 335 bits (169), Expect = 6e-89 Identities = 313/363 (86%) Strand = Plus / Plus Query: 18 cccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccacc 77 ||||||| ||||||||| |||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 75 cccaccgtgatggcctcgtcggccacctccgttgctcccttccaggggctcaaatccacc 134 Query: 78 gccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggt 137 ||||| || ||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 135 gccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgtcagcaacggt 194 Query: 138 ggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctg 197 ||||||||||| || |||||||||||||| || || |||||||||||||| ||||||||| Sbjct: 195 ggaaggatcagctgtatgcaggtgtggccgattgaaggcatcaagaagtttgagaccctg 254 Query: 198 tcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgc 257 || ||| ||||||| |||| |||| |||| | |||||| |||| |||||| |||| Sbjct: 255 tcgtacctgccaccgctcacggtcgaggacctcttgaagcagatcgagtacctgctccgg 314 Query: 258 tccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac 317 ||||| |||||||||||||||||||| || ||||| |||||| ||| ||||||| || || Sbjct: 315 tccaaatgggtgccttgcctcgagtttagtaaggtcgggttcgtctaccgtgagaaccac 374 Query: 318 gcatntnctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgga 377 | | |||||||||| |||||| || ||||||| |||||||||||| ||||| ||||| Sbjct: 375 aggtctcctgggtactatgatggcaggtactggaccatgtggaagctgcctatgttcgga 434 Query: 378 tgc 380 ||| Sbjct: 435 tgc 437
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 327 bits (165), Expect = 2e-86 Identities = 322/374 (86%), Gaps = 5/374 (1%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||||||||||||||| || |||||||| |||||||||||||| ||||| Sbjct: 3 gatggcttcttcggccacctccgtcgcgcccttccagggcctcaagtccaccgctggcct 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||| ||| | || |||||||||||||||||||||| |||||||| Sbjct: 63 ccccgtcagccgccgcagcaatgccg---gcctcggcagcgtcagcaacggcggaaggat 119 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | Sbjct: 120 caggtgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacct 179 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 ||||||||| |||||||||||| |||||| |||||| | |||||||||||||||| Sbjct: 180 gccaccactgtcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtg 239 Query: 266 ggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatntn 324 ||| || ||||||||||||||||||||||| ||||||||||| |||||| | ||| | Sbjct: 240 ggttccctgcctcgagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctc 298 Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccn 384 | || |||||||| ||| || |||||||||||||||||||| | ||| |||| ||| | Sbjct: 299 ccggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcactg 358 Query: 385 acnccncacaggtg 398 || || |||||||| Sbjct: 359 acgcctcacaggtg 372
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 325 bits (164), Expect = 6e-86 Identities = 321/373 (86%), Gaps = 5/373 (1%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || |||||||||||||| || || |||||||| |||||||||||||| ||||| Sbjct: 3 gatggcttcttcggccacctccgttgcgcccttccagggcctcaagtccaccgctggcct 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||| ||| | || |||||||||||||||||||||| |||||||| Sbjct: 63 ccccgtcagccgccgcagcaatgccg---gcctcggcagcgtcagcaacggcggaaggat 119 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 ||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 120 caggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctttcttactt 179 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 |||||||||| |||||||||||| |||||| |||||| | |||||||||||||||| Sbjct: 180 gccaccactctcggaggaggccctcctgaagcagatcgacttcttgatccgctccaagtg 239 Query: 266 ggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatntn 324 ||| || ||||| ||||||||||||||||| ||||||||||| |||||| | ||| | Sbjct: 240 ggttccctgcctggagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctc 298 Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccn 384 | || |||||||| ||| || |||||||||||||||||||| | ||| |||| ||| || Sbjct: 299 ccggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccg 358 Query: 385 acnccncacaggt 397 || || ||||||| Sbjct: 359 acgcctcacaggt 371
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 325 bits (164), Expect = 6e-86 Identities = 321/373 (86%), Gaps = 5/373 (1%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || |||||||||||||| || || |||||||| |||||||||||||| ||||| Sbjct: 3 gatggcttcttcggccacctccgttgcgcccttccagggcctcaagtccaccgctggcct 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||| ||| | || |||||||||||||||||||||| |||||||| Sbjct: 63 ccccgtcagccgccgcagcaatgccg---gcctcggcagcgtcagcaacggcggaaggat 119 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 ||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 120 caggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctttcttactt 179 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 |||||||||| |||||||||||| |||||| |||||| | |||||||||||||||| Sbjct: 180 gccaccactctcggaggaggccctcctgaagcagatcgacttcttgatccgctccaagtg 239 Query: 266 ggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatntn 324 ||| || ||||| ||||||||||||||||| ||||||||||| |||||| | ||| | Sbjct: 240 ggttccctgcctggagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctc 298 Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccn 384 | || |||||||| ||| || |||||||||||||||||||| | ||| |||| ||| || Sbjct: 299 ccggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccg 358 Query: 385 acnccncacaggt 397 || || ||||||| Sbjct: 359 acgcctcacaggt 371
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 319 bits (161), Expect = 4e-84 Identities = 321/374 (85%), Gaps = 5/374 (1%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || || |||||||||||||| || |||||||| |||||||||||||| ||||| Sbjct: 3 gatggcttcttccgccacctccgtcgcgcccttccagggcctcaagtccaccgctggcct 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||| ||| | || |||||||||||||||||||||| |||||||| Sbjct: 63 ccccgtcagccgccgcagcaatgccg---gcctcggcagcgtcagcaacggcggaaggat 119 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | Sbjct: 120 caggtgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacct 179 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 ||||||||| |||||||||||| |||||| |||||| | |||||||||||||||| Sbjct: 180 gccaccactgtcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtg 239 Query: 266 ggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatntn 324 ||| || ||||||||||||||||||||||| ||||||||||| |||||| | ||| | Sbjct: 240 ggttccctgcctcgagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctc 298 Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccn 384 | || |||||||| ||| || |||||||||||||||||||| | ||| |||| ||| | Sbjct: 299 ccggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcactg 358 Query: 385 acnccncacaggtg 398 || || |||||||| Sbjct: 359 acgcctcacaggtg 372
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 319 bits (161), Expect = 4e-84 Identities = 321/374 (85%), Gaps = 5/374 (1%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||||||| | ||||| || |||||||||||||||||||| || ||||| Sbjct: 3 gatggcttcttcggccaccacggtcgcgcccttccaggggctcaagtccactgctggcct 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||||||||||||| ||||| || |||| ||||||||||||||||||||||| || Sbjct: 63 tcccgtcagccgccgcagcaacgccg---gccttggcagcgtcagcaacggtggaagaat 119 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 | | ||||||||||||||||| || ||||||||||||||||||||||||||||||||| | Sbjct: 120 ccgatgcatgcaggtgtggcctattgagggcatcaagaagttcgagaccctgtcttacct 179 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 ||| |||||| |||||||||||| |||||| |||||| | |||||||||||||||| Sbjct: 180 gccgccactctcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtg 239 Query: 266 ggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatntn 324 ||| |||||||||||||||||||||||||| ||||||||||| |||||| | ||| | Sbjct: 240 ggttccttgcctcgagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctc 298 Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccn 384 | || |||||||| ||| || |||||||||||||||||||| | ||| |||| ||| || Sbjct: 299 ccggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccg 358 Query: 385 acnccncacaggtg 398 || || |||||||| Sbjct: 359 acgcctcacaggtg 372
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 317 bits (160), Expect = 2e-83 Identities = 320/373 (85%), Gaps = 5/373 (1%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || || ||||||||||| || || |||||||| |||||||||||||| ||||| Sbjct: 3 gatggcttcttccgccacctccgttgcgcccttccagggcctcaagtccaccgctggcct 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||| ||| | || |||||||||||||||||||||| |||||||| Sbjct: 63 ccccgtcagccgccgcagcaatgccg---gcctcggcagcgtcagcaacggcggaaggat 119 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 ||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 120 caggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctttcttactt 179 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 |||||||||| |||||||||||| |||||| |||||| | |||||||||||||||| Sbjct: 180 gccaccactctcggaggaggccctcctgaagcagatcgacttcttgatccgctccaagtg 239 Query: 266 ggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatntn 324 ||| || ||||| ||||||||||||||||| ||||||||||| |||||| | ||| | Sbjct: 240 ggttccctgcctggagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctc 298 Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccn 384 | || |||||||| ||| || |||||||||||||||||||| | ||| |||| ||| || Sbjct: 299 ccggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccg 358 Query: 385 acnccncacaggt 397 || || ||||||| Sbjct: 359 acgcctcacaggt 371
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 311 bits (157), Expect = 9e-82 Identities = 320/374 (85%), Gaps = 5/374 (1%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||||||||| ||||| || ||||||| |||||||||||| || ||||| Sbjct: 3 gatggcttcttcggccacctcggtcgcgcccttccaggagctcaagtccactgctggcct 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||||||||||||| ||||| || |||| ||||||||||||||||||||||| || Sbjct: 63 tcccgtcagccgccgcagcaacgccg---gccttggcagcgtcagcaacggtggaagaat 119 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 | | ||||||||||||||||| || ||||||||||||||||||||||||||||||||| | Sbjct: 120 ccgatgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacct 179 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 |||||||||| |||||||||||| |||||| |||||| | |||||||||||||||| Sbjct: 180 gccaccactctcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtg 239 Query: 266 ggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatntn 324 ||| || ||||| ||||||||||||||||| ||||||||||| |||||| | ||| | Sbjct: 240 ggttccctgcctggagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctc 298 Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccn 384 | || |||||||| ||| || |||||||||||||||||||| | ||| |||| ||| || Sbjct: 299 ccggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccg 358 Query: 385 acnccncacaggtg 398 || || |||||||| Sbjct: 359 acgcctcacaggtg 372
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 311 bits (157), Expect = 9e-82 Identities = 320/374 (85%), Gaps = 5/374 (1%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || || |||||||| ||||| || |||||||||||||||||||| || ||||| Sbjct: 3 gatggcttcgtccgccacctcggtcgcgcccttccaggggctcaagtccactgctggcct 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||||||||||||| ||||| || |||| ||||||||||||||||||||||| || Sbjct: 63 tcccgtcagccgccgcagcaacgccg---gccttggcagcgtcagcaacggtggaagaat 119 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 | | ||||||||||||||||| || |||||||||||||| |||||||||||||||||| | Sbjct: 120 ccgatgcatgcaggtgtggcctattgagggcatcaagaaattcgagaccctgtcttacct 179 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 ||||||||||| |||||||||||| |||||| |||||| | |||||||||||||||| Sbjct: 180 gccaccactcacagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtg 239 Query: 266 ggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatntn 324 ||| || ||||| ||||||||||||||||| ||||||||||| |||||| | ||| | Sbjct: 240 ggttccctgcctggagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctc 298 Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccn 384 |||| ||||| || ||| || |||||||||||||||||||| | ||| |||| ||| || Sbjct: 299 ctggatactatgacggcaggtactggacaatgtggaagctgcccatgttcgggtgcaccg 358 Query: 385 acnccncacaggtg 398 || || |||||||| Sbjct: 359 acgcctcacaggtg 372
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 311 bits (157), Expect = 9e-82 Identities = 320/374 (85%), Gaps = 5/374 (1%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||||||||| ||||| || ||||||| |||||||||||| || ||||| Sbjct: 3 gatggcttcttcggccacctcggtcgcgcccttccaggagctcaagtccactgctggcct 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||||||||||||| ||||| || |||| ||||||||||||||||||||||| || Sbjct: 63 tcccgtcagccgccgcagcaacgccg---gccttggcagcgtcagcaacggtggaagaat 119 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 | | ||||||||||||||||| || ||||||||||||||||||||||||||||||||| | Sbjct: 120 ccgatgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacct 179 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 |||||||||| |||||||||||| |||||| |||||| | |||||||||||||||| Sbjct: 180 gccaccactctcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtg 239 Query: 266 ggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatntn 324 ||| || ||||| ||||||||||||||||| ||||||||||| |||||| | ||| | Sbjct: 240 ggttccctgcctggagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctc 298 Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccn 384 | || |||||||| ||| || |||||||||||||||||||| | ||| |||| ||| || Sbjct: 299 ccggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccg 358 Query: 385 acnccncacaggtg 398 || || |||||||| Sbjct: 359 acgcctcacaggtg 372
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 311 bits (157), Expect = 9e-82 Identities = 320/374 (85%), Gaps = 5/374 (1%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||||||||| ||||| || |||||||||||||||||||| || ||||| Sbjct: 3 gatggcttcttcggccacctcggtcgcgcccttccaggggctcaagtccactgctggcct 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||||||||||||| ||||| || |||| ||||||||||||||||||||||| || Sbjct: 63 tcccgtcagccgccgcagcaacgccg---gccttggcagcgtcagcaacggtggaagaat 119 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 | | ||||||||||||||||| || ||||||||||||||||||||||||||||||||| | Sbjct: 120 ccgatgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacct 179 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 |||||||||| |||||||||||| |||||| |||||| | |||||||||||||||| Sbjct: 180 gccaccactctcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtg 239 Query: 266 ggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatntn 324 ||| || ||||| ||||||||||||||||| ||||||||||| ||| || | ||| | Sbjct: 240 ggttccctgcctggagttcagcaaggttggcttcatcttccgcgagtacggcagca-ctc 298 Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccn 384 | || |||||||| ||| || |||||||||||||||||||| | ||| |||| ||| || Sbjct: 299 ccggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccg 358 Query: 385 acnccncacaggtg 398 || || |||||||| Sbjct: 359 acgcctcacaggtg 372
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 504 Score = 311 bits (157), Expect = 9e-82 Identities = 320/374 (85%), Gaps = 5/374 (1%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||||||||| ||||| || |||||||||||||||||||| || ||||| Sbjct: 3 gatggcttcgtcggccacctcggtcgcgcccttccaggggctcaagtccactgctggcct 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||||||||||||| ||||| || |||| ||||||||||||||||||||||| || Sbjct: 63 tcccgtcagccgccgcagcaacgccg---gccttggcagcgtcagcaacggtggaagaat 119 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 | | ||||||||||||||||| || ||||||||||||||||||||||||||||||||| | Sbjct: 120 ccgatgcatgcaggtgtggcctattgagggcatcaagaagttcgagaccctgtcttacct 179 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 ||||||||||| |||||||||||| |||||| |||||| | |||||||||||||||| Sbjct: 180 gccaccactcacagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtg 239 Query: 266 ggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatntn 324 ||| |||||||||||||||||| | | ||| ||||||||||| |||||| | ||| | Sbjct: 240 ggttccttgcctcgagttcagccaaggtggcttcatcttccgcgagcacggcagca-ctc 298 Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccn 384 |||| ||||| || ||| || ||||||||||||||||||| | ||| |||||||| || Sbjct: 299 ctggatactatgacggcaggtactggacaatgtggaagctccccatgttcggatgcaccg 358 Query: 385 acnccncacaggtg 398 || || | |||||| Sbjct: 359 acgcctcccaggtg 372
>gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 860 Score = 297 bits (150), Expect = 1e-77 Identities = 306/360 (85%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||||||| ||||||||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 57 ccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtccac 116 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 |||||| || ||||||||||||||||||| | | | || |||||| ||||||||| || Sbjct: 117 cgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagcaatgg 176 Query: 137 tggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 |||||||||| |||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 177 cggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccct 236 Query: 197 gtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccg 256 || ||| |||||||||||| | ||||| || | |||||| |||| |||||| | || Sbjct: 237 atcgtacctgccaccactcaccgtggaggatcttttgaagcagatcgagtacctgcttcg 296 Query: 257 ctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaa 316 |||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| || | Sbjct: 297 atccaagtgggtgccttgcctcgagttcagcaaggttggattcgtctaccgtgagaacca 356 Query: 317 cgcatntnctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 | | | | ||||||||||||||| || | ||||| |||||||||||| | ||| |||| Sbjct: 357 caggtctcccgggtactacgatggcaggtattggaccatgtggaagctgcccatgttcgg 416
>dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full insert sequence Length = 899 Score = 297 bits (150), Expect = 1e-77 Identities = 306/360 (85%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||||||| ||||||||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 74 ccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtccac 133 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 |||||| || ||||||||||||||||||| | | | || |||||| ||||||||| || Sbjct: 134 cgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagcaatgg 193 Query: 137 tggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 |||||||||| |||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 194 cggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccct 253 Query: 197 gtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccg 256 || ||| |||||||||||| | ||||| || | |||||| |||| |||||| | || Sbjct: 254 atcgtacctgccaccactcaccgtggaggatcttttgaagcagatcgagtacctgcttcg 313 Query: 257 ctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaa 316 |||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| || | Sbjct: 314 atccaagtgggtgccttgcctcgagttcagcaaggttggattcgtctaccgtgagaacca 373 Query: 317 cgcatntnctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 | | | | ||||||||||||||| || | ||||| |||||||||||| | ||| |||| Sbjct: 374 caggtctcccgggtactacgatggcaggtattggaccatgtggaagctgcccatgttcgg 433
>dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-B Length = 738 Score = 297 bits (150), Expect = 1e-77 Identities = 219/245 (89%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 405 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 464 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 465 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 524 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | ||||||||| Sbjct: 525 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 584 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || ||||| |||||||||||||||||||| ||||| |||| ||| || || || ||||| Sbjct: 585 gacggccgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 644 Query: 396 gtgct 400 ||||| Sbjct: 645 gtgct 649 Score = 137 bits (69), Expect = 3e-29 Identities = 119/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||| |||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 ccccgtcggccgccgctccagcggc---agcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Hor-A Length = 605 Score = 297 bits (150), Expect = 1e-77 Identities = 219/245 (89%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 | ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 298 accacggaggccctcctgaagcaggttgactacctgatccgctccaagtgggtgccctgc 357 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || ||||| |||||||||||||||||||| ||||| |||||||| || || || ||||| Sbjct: 418 gacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 477 Query: 396 gtgct 400 ||||| Sbjct: 478 gtgct 482 Score = 145 bits (73), Expect = 1e-31 Identities = 120/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 ccccgtcagccgccgctcca---gcgccagcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bro-B Length = 784 Score = 293 bits (148), Expect = 2e-76 Identities = 217/243 (89%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 417 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 476 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||| ||||||||||| |||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 477 tccaccgaggccctcctgaagcagatcgactacttgatccgctccaagtgggtgccgtgc 536 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| |||||||||||||||| |||| | |||| |||||| Sbjct: 537 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaatgcatctcctggatactac 596 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 |||||||| ||||||||||||||||| || ||||| |||||||| || | || ||||| Sbjct: 597 gatggccgttactggacaatgtggaagttgcctatgttcggatgcaccgatgcctcacag 656 Query: 396 gtg 398 ||| Sbjct: 657 gtg 659 Score = 149 bits (75), Expect = 8e-33 Identities = 119/134 (88%), Gaps = 6/134 (4%) Strand = Plus / Plus Query: 27 atggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcctt 86 ||||| || ||||||||||||||||| || |||||||| |||||||||||||||||||| Sbjct: 5 atggcttcgtcggccacctccgtcgcgcccttccagggtctcaagtccaccgccggcctg 64 Query: 87 cccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggatc 146 ||||||||||||||||||| || |||||||||||||||||| ||| ||||||||| Sbjct: 65 cccgtcagccgccgctcca------ctggcctcggcagcgtcagcagcggcggaaggatc 118 Query: 147 aggtgcatgcaggt 160 |||||||||||||| Sbjct: 119 aggtgcatgcaggt 132
>gb|AF017363.1|AF017363 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 918 Score = 291 bits (147), Expect = 9e-76 Identities = 306/361 (84%) Strand = Plus / Plus Query: 16 gccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtcca 75 ||||||||| ||||||||| |||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 57 gccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtcca 116 Query: 76 ccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacg 135 ||||||| || ||||||||||||||||||| | | | || |||||| ||||||||| | Sbjct: 117 ccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagcaatg 176 Query: 136 gtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccc 195 | |||||||||| |||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 177 gcggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccc 236 Query: 196 tgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatcc 255 | || ||| |||||||||||| | ||||| || | |||||| |||| |||||| | | Sbjct: 237 tatcgtacctgccaccactcaccgtggaggatcttttgaagcagatcgagtacctgcttc 296 Query: 256 gctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcaca 315 | ||||||||||||||||| |||||||||||||||||||||||| ||| ||||||| || Sbjct: 297 gatccaagtgggtgccttgtctcgagttcagcaaggttgggttcgtctaccgtgagaacc 356 Query: 316 acgcatntnctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcg 375 || | | | || |||||||||||| || | ||||| |||||||||||| | ||| ||| Sbjct: 357 acaggtctcccggatactacgatggcaggtattggaccatgtggaagctgcccatgttcg 416 Query: 376 g 376 | Sbjct: 417 g 417
>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-B Length = 789 Score = 289 bits (146), Expect = 3e-75 Identities = 218/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 422 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 481 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 482 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 541 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | | ||||||||| Sbjct: 542 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 601 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || |||||||||||||||||||| ||||| |||| ||| || || || | ||| Sbjct: 602 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccactcag 661 Query: 396 gtgct 400 ||||| Sbjct: 662 gtgct 666 Score = 137 bits (69), Expect = 3e-29 Identities = 119/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| |||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcctcggctaccagcgtcgcacccttccaggggctcaagtccacggccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 ccccgtcagccgccgctccagcggc---agcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-B Length = 787 Score = 289 bits (146), Expect = 3e-75 Identities = 218/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 420 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 480 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 539 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | ||||||||| Sbjct: 540 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 599 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || |||||||||||||||||||| ||||| |||| ||| || || || ||||| Sbjct: 600 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 659 Query: 396 gtgct 400 ||||| Sbjct: 660 gtgct 664 Score = 145 bits (73), Expect = 1e-31 Identities = 120/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 ccccgtcagccgccgctcca---gcgccagcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Agr-A Length = 604 Score = 289 bits (146), Expect = 3e-75 Identities = 218/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 356 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 416 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || ||||| |||||||||||||||||||| ||||| |||| ||| || || || | ||| Sbjct: 417 gacggccgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 396 gtgct 400 ||||| Sbjct: 477 gtgct 481 Score = 145 bits (73), Expect = 1e-31 Identities = 120/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 gcccgtcagccgccgctccagcggc---agcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 283 bits (143), Expect = 2e-73 Identities = 253/289 (87%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || || |||||| ||||||| || |||||||| |||||||||||||| ||||| Sbjct: 3 gatggcttcgtccgccaccaccgtcgcaccattccagggcctcaagtccaccgctggcct 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||| | | ||| ||||||||||||||||||||||||||||| || Sbjct: 63 ccccgtcagccgccgc---agctccgccagcctcggcagcgtcagcaacggtggaagaat 119 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 ||| ||||||||||||||||| || |||||||||||||||||||||||||| |||||| | Sbjct: 120 cagatgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctttcttacct 179 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 |||||||||| |||||||||||| |||||| |||||| | |||||||||||||||| Sbjct: 180 gccaccactctcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtg 239 Query: 266 ggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcac 314 ||| || ||||| ||||||||||||||||| ||||||||||| |||||| Sbjct: 240 ggttccctgccttgagttcagcaaggttggcttcatcttccgcgagcac 288 Score = 61.9 bits (31), Expect = 1e-06 Identities = 57/68 (83%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacncc 389 |||||||| ||| || |||||||||||||||||||| | ||| |||| ||| || || || Sbjct: 304 tactacgacggcaggtactggacaatgtggaagctgcccatgttcgggtgcaccgacgcc 363 Query: 390 ncacaggt 397 ||||||| Sbjct: 364 tcacaggt 371
>dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full insert sequence Length = 984 Score = 281 bits (142), Expect = 8e-73 Identities = 304/360 (84%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| |||||| || ||||||||| |||||||||| |||||||||||||||||||| Sbjct: 216 cccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtccac 275 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 ||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| || Sbjct: 276 cgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaatgg 335 Query: 137 tggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 || |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 336 cggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccct 395 Query: 197 gtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccg 256 || ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| |||| Sbjct: 396 ctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgctccg 455 Query: 257 ctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaa 316 |||||||||||||| |||||||||||||||||||| || ||| ||| ||||||| || | Sbjct: 456 ttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgtctaccgtgagaacca 515 Query: 317 cgcatntnctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 | || | || |||||||||||| || ||||||| |||||||||||| | ||| |||| Sbjct: 516 cagatcccccggatactacgatggcaggtactggaccatgtggaagctgcccatgttcgg 575
>dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full insert sequence Length = 828 Score = 281 bits (142), Expect = 8e-73 Identities = 304/360 (84%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| |||||| || ||||||||| |||||||||| |||||||||||||||||||| Sbjct: 62 cccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtccac 121 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 ||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| || Sbjct: 122 cgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaatgg 181 Query: 137 tggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 || |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 182 cggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccct 241 Query: 197 gtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccg 256 || ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| |||| Sbjct: 242 ctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgctccg 301 Query: 257 ctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaa 316 |||||||||||||| |||||||||||||||||||| || ||| ||| ||||||| || | Sbjct: 302 ttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgtctaccgtgagaacca 361 Query: 317 cgcatntnctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 | || | || |||||||||||| || ||||||| |||||||||||| | ||| |||| Sbjct: 362 cagatcccccggatactacgatggcaggtactggaccatgtggaagctgcccatgttcgg 421
>dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full insert sequence Length = 2409 Score = 281 bits (142), Expect = 8e-73 Identities = 304/360 (84%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| |||||| || ||||||||| |||||||||| |||||||||||||||||||| Sbjct: 63 cccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtccac 122 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 ||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| || Sbjct: 123 cgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaatgg 182 Query: 137 tggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 || |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 183 cggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccct 242 Query: 197 gtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccg 256 || ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| |||| Sbjct: 243 ctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgctccg 302 Query: 257 ctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaa 316 |||||||||||||| |||||||||||||||||||| || ||| ||| ||||||| || | Sbjct: 303 ttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgtctaccgtgagaacca 362 Query: 317 cgcatntnctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 | || | || |||||||||||| || ||||||| |||||||||||| | ||| |||| Sbjct: 363 cagatcccccggatactacgatggcaggtactggaccatgtggaagctgcccatgttcgg 422
>dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full insert sequence Length = 830 Score = 281 bits (142), Expect = 8e-73 Identities = 304/360 (84%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| |||||| || ||||||||| |||||||||| |||||||||||||||||||| Sbjct: 65 cccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtccac 124 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 ||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| || Sbjct: 125 cgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaatgg 184 Query: 137 tggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 || |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 185 cggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccct 244 Query: 197 gtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccg 256 || ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| |||| Sbjct: 245 ctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgctccg 304 Query: 257 ctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaa 316 |||||||||||||| |||||||||||||||||||| || ||| ||| ||||||| || | Sbjct: 305 ttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgtctaccgtgagaacca 364 Query: 317 cgcatntnctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 | || | || |||||||||||| || ||||||| |||||||||||| | ||| |||| Sbjct: 365 cagatcccccggatactacgatggcaggtactggaccatgtggaagctgcccatgttcgg 424
>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-B Length = 787 Score = 281 bits (142), Expect = 8e-73 Identities = 217/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 420 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 480 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 539 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | ||||||||| Sbjct: 540 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 599 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || |||||||||||||||||||| ||||| |||| ||| || || || ||||| Sbjct: 600 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 659 Query: 396 gtgct 400 ||||| Sbjct: 660 gtgct 664 Score = 153 bits (77), Expect = 5e-34 Identities = 121/135 (89%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| |||||||| Sbjct: 4 gatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggcct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 gcccgtcagccgccgctccagcggc---agcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-B Length = 792 Score = 281 bits (142), Expect = 8e-73 Identities = 217/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 425 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 484 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 485 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 544 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | || |||||| Sbjct: 545 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccggatactac 604 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 ||||| || |||||||||||||||||||| ||||| |||| ||| || || || ||||| Sbjct: 605 gatggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 664 Query: 396 gtgct 400 ||||| Sbjct: 665 gtgct 669 Score = 137 bits (69), Expect = 3e-29 Identities = 119/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 ||||||||| ||||| ||| ||||||| || ||||||||||||||||| || ||||| || Sbjct: 4 gatggcctcgtcggctaccaccgtcgcacccttccaggggctcaagtcgacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 ccccgtcagccgccgctcca---gcgccagcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||| ||||||||| Sbjct: 121 caggtacatgcaggt 135
>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-B Length = 792 Score = 281 bits (142), Expect = 8e-73 Identities = 217/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 425 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 484 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 485 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 544 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | || |||||| Sbjct: 545 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccggatactac 604 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 ||||| || |||||||||||||||||||| ||||| |||| ||| || || || ||||| Sbjct: 605 gatggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 664 Query: 396 gtgct 400 ||||| Sbjct: 665 gtgct 669 Score = 137 bits (69), Expect = 3e-29 Identities = 119/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || ||||||||||||||||| || ||||| || Sbjct: 4 gatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtcgacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 ccccgtcagccgccgctcca---gcgccagcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-A Length = 607 Score = 281 bits (142), Expect = 8e-73 Identities = 217/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 240 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 299 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 300 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 359 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | ||||||||| Sbjct: 360 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 419 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || ||||| |||||||||||||||||||| ||||| |||| ||| || || || | ||| Sbjct: 420 gacggccgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 479 Query: 396 gtgct 400 ||||| Sbjct: 480 gtgct 484 Score = 145 bits (73), Expect = 1e-31 Identities = 120/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 gcccgtcagccgccgctccagcggc---agcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-A Length = 611 Score = 281 bits (142), Expect = 8e-73 Identities = 217/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 244 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 303 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 304 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 363 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | ||||||||| Sbjct: 364 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 423 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || ||||| |||||||||||||||||||| ||||| |||| ||| || || || | ||| Sbjct: 424 gacggccgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 483 Query: 396 gtgct 400 ||||| Sbjct: 484 gtgct 488 Score = 137 bits (69), Expect = 3e-29 Identities = 119/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| ||||||||| |||||||||| || |||||||| Sbjct: 64 ccccgtcagccgccgctccagcggc---agcctcggccgcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A3 Length = 604 Score = 281 bits (142), Expect = 8e-73 Identities = 217/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | | ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || |||||||||||||||||||| ||||| |||| ||| || || || | ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 396 gtgct 400 ||||| Sbjct: 477 gtgct 481 Score = 121 bits (61), Expect = 2e-24 Identities = 117/135 (86%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||| | || ||||| |||||||||||||| ||||| || Sbjct: 4 gatggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| ||||||||| |||||||||| || |||||||| Sbjct: 64 ccccgtcagccgccgctccagcggc---agcctcggccgcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A2 Length = 604 Score = 281 bits (142), Expect = 8e-73 Identities = 217/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | | ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || |||||||||||||||||||| ||||| |||| ||| || || || | ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 396 gtgct 400 ||||| Sbjct: 477 gtgct 481 Score = 121 bits (61), Expect = 2e-24 Identities = 117/135 (86%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||| | || ||||| |||||||||||||| ||||| || Sbjct: 4 gatggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| ||||||||| |||||||||| || |||||||| Sbjct: 64 ccccgtcagccgccgctccagcggc---agcctcggccgcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A1 Length = 604 Score = 281 bits (142), Expect = 8e-73 Identities = 217/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | | ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || |||||||||||||||||||| ||||| |||| ||| || || || | ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 396 gtgct 400 ||||| Sbjct: 477 gtgct 481 Score = 121 bits (61), Expect = 2e-24 Identities = 117/135 (86%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||| | || ||||| |||||||||||||| ||||| || Sbjct: 4 gatggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| ||||||||| |||||||||| || |||||||| Sbjct: 64 ccccgtcagccgccgctccagcggc---agcctcggccgcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-A Length = 604 Score = 281 bits (142), Expect = 8e-73 Identities = 217/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 416 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || ||||| ||||||||||||||||||| ||||| |||| ||| || || || ||||| Sbjct: 417 gacggccgatactggacaatgtggaagctccctatgttcgggtgcaccgacgccacacag 476 Query: 396 gtgct 400 ||||| Sbjct: 477 gtgct 481 Score = 121 bits (61), Expect = 2e-24 Identities = 117/135 (86%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||| | || ||||| |||||||||||||| ||||| || Sbjct: 4 gatggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| ||||||||| |||||||||| || |||||||| Sbjct: 64 ccccgtcagccgccgctccagcggc---agcctcggccgcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-A1 Length = 604 Score = 281 bits (142), Expect = 8e-73 Identities = 217/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | | ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || |||||||||||||||||||| ||||| |||| ||| || || || | ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 396 gtgct 400 ||||| Sbjct: 477 gtgct 481 Score = 121 bits (61), Expect = 2e-24 Identities = 117/135 (86%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||| | || ||||| |||||||||||||| ||||| || Sbjct: 4 gatggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| ||||||||| |||||||||| || |||||||| Sbjct: 64 ccccgtcagccgccgctccagcggc---agcctcggccgcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 604 Score = 281 bits (142), Expect = 8e-73 Identities = 217/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | | ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || |||||||||||||||||||| ||||| |||| ||| || || || | ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 396 gtgct 400 ||||| Sbjct: 477 gtgct 481 Score = 121 bits (61), Expect = 2e-24 Identities = 117/135 (86%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||| | || ||||| |||||||||||||| ||||| || Sbjct: 4 gatggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| ||||||||| |||||||||| || |||||||| Sbjct: 64 ccccgtcagccgccgctccagcggc---agcctcggccgcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 Score = 281 bits (142), Expect = 8e-73 Identities = 217/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 880 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 939 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 940 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 999 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | ||||||||| Sbjct: 1000 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcctccgggtactac 1059 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || |||||||||||||||||||| ||||| |||| ||| || || || | ||| Sbjct: 1060 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 1119 Query: 396 gtgct 400 ||||| Sbjct: 1120 gtgct 1124 Score = 186 bits (94), Expect = 4e-44 Identities = 196/233 (84%) Strand = Plus / Plus Query: 168 atcgagggcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggcc 227 ||||||||||| |||||||| ||||||||||||||||||||||| ||| || |||||| Sbjct: 5296 atcgagggcatgaagaagtttgagaccctgtcttacttgccacccctctccatagaggcc 5355 Query: 228 ctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagc 287 ||||||| ||||||| |||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 5356 ctccttacgcaggtcaactacctgatccgctccaagtgggtgccctgcctcgacttcagc 5415 Query: 288 aaggttgggttcatcttccgtgagcacaacgcatntnctgggtactacgatggccggnac 347 ||||| | ||| |||||||||||||||| | |||||||||| |||||| | || Sbjct: 5416 aaggtcagcttcgtcttccgtgagcacaataactcccctgggtactatgatggctgatac 5475 Query: 348 tggacaatgtggaagctgnctatgntcggatgcnccnacnccncacaggtgct 400 |||||| ||||||| || ||||| |||| ||| | || || |||||||||| Sbjct: 5476 cggacaaagtggaagttgcctatgttcgggtgcactgacgccacacaggtgct 5528 Score = 155 bits (78), Expect = 1e-34 Identities = 138/157 (87%), Gaps = 2/157 (1%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||| ||||| ||||||||||||||||||||||||| |||||| |||||||| | ||| Sbjct: 3943 caggtttggccgatcgagggcatcaagaagttcgagatcctgtc--acttgccatccctc 4000 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 || |||||||||||| |||||||||||||||||||||| ||||||||| ||||| ||| Sbjct: 4001 tccatggaggccctcctcaagcaggtcgactacctgatcccctccaagtgagtgccctgc 4060 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagc 312 ||||||||||| || |||| ||||| |||||||||| Sbjct: 4061 ctcgagttcagtaacattggcttcatattccgtgagc 4097 Score = 141 bits (71), Expect = 2e-30 Identities = 126/144 (87%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| |||||| || ||||| ||| ||||||| || |||||||||||||||||||| Sbjct: 631 ccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccac 690 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 ||||| || ||||||||||||||||||| |||| ||||||||| |||||||||| || Sbjct: 691 agccggtctccccgtcagccgccgctccagcggc---agcctcggccgcgtcagcaatgg 747 Query: 137 tggaaggatcaggtgcatgcaggt 160 ||||||||||||||||||||||| Sbjct: 748 cggaaggatcaggtgcatgcaggt 771
>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase Small subunit, complete cds, clone:p6-1 Length = 638 Score = 281 bits (142), Expect = 8e-73 Identities = 217/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 255 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 314 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 315 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 374 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | ||||||||| Sbjct: 375 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcctccgggtactac 434 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || |||||||||||||||||||| ||||| |||| ||| || || || | ||| Sbjct: 435 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 494 Query: 396 gtgct 400 ||||| Sbjct: 495 gtgct 499 Score = 141 bits (71), Expect = 2e-30 Identities = 126/144 (87%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| |||||| || ||||| ||| ||||||| || |||||||||||||||||||| Sbjct: 6 ccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccac 65 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 ||||| || ||||||||||||||||||| |||| ||||||||| |||||||||| || Sbjct: 66 agccggtctccccgtcagccgccgctccagcggc---agcctcggccgcgtcagcaatgg 122 Query: 137 tggaaggatcaggtgcatgcaggt 160 ||||||||||||||||||||||| Sbjct: 123 cggaaggatcaggtgcatgcaggt 146
>dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS2106 Length = 895 Score = 281 bits (142), Expect = 8e-73 Identities = 304/360 (84%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||||||| ||||||||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 72 ccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtccac 131 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 |||||| || ||||||||||||||||||| | | | || |||||| ||||||||| || Sbjct: 132 cgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagcaatgg 191 Query: 137 tggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 |||||||||| || ||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 192 cggaaggatcaagttcatgcaggtgtggccaattgagggcatcaagaagttcgagaccct 251 Query: 197 gtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccg 256 || ||| |||||||||||| | ||||| || | |||||| |||| |||||| | || Sbjct: 252 atcgtacctgccaccactcaccgtggaggatcttttgaagcagatcgagtacctgcttcg 311 Query: 257 ctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaa 316 |||||||||||||||||||||||||||||||||||||| ||| ||| ||| ||| || | Sbjct: 312 atccaagtgggtgccttgcctcgagttcagcaaggttggattcgtctaccgcgagaacca 371 Query: 317 cgcatntnctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 | | | | ||||||||||||||| || | ||||| |||||||||||| | ||| |||| Sbjct: 372 caggtctcccgggtactacgatggcaggtattggaccatgtggaagctgcccatgttcgg 431
>dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS1139 Length = 830 Score = 281 bits (142), Expect = 8e-73 Identities = 304/360 (84%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| |||||| || ||||||||| |||||||||| |||||||||||||||||||| Sbjct: 60 cccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtccac 119 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 ||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| || Sbjct: 120 cgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaatgg 179 Query: 137 tggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 || |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 180 cggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccct 239 Query: 197 gtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccg 256 || ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| |||| Sbjct: 240 ctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgctccg 299 Query: 257 ctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaa 316 |||||||||||||| |||||||||||||||||||| || ||| ||| ||||||| || | Sbjct: 300 ttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgtctaccgtgagaacca 359 Query: 317 cgcatntnctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 | || | || |||||||||||| || ||||||| |||||||||||| | ||| |||| Sbjct: 360 cagatcccccggatactacgatggcaggtactggaccatgtggaagctgcccatgttcgg 419
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 280 bits (141), Expect = 3e-72 Identities = 316/374 (84%), Gaps = 5/374 (1%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || || |||||| ||||||| || |||||||| |||||||||||||| ||||| Sbjct: 3 gatggcttcgtccgccaccaccgtcgcacccttccagggcctcaagtccaccgctggcct 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||| ||| | ||| ||||||||||||||||||||||||||||| || Sbjct: 63 ccccgtcagccgtcgcagctccgga---agcctcggcagcgtcagcaacggtggaagaat 119 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 | | ||||||||||||||||| || ||||||||||||||||||||||||||||||||| | Sbjct: 120 ccgatgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacct 179 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 |||||||||| |||||||||||| |||||| |||| | | |||||||||||||||| Sbjct: 180 gccaccactctcagaggaggccctcctgaagcagatcgaattcttgatccgctccaagtg 239 Query: 266 ggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatntn 324 ||| || ||||| ||||||||||||||||| ||||||||||| |||||| | ||| | Sbjct: 240 ggttccctgcctggagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctc 298 Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccn 384 | || |||||||| ||| || |||||||||||||||||||| | ||| |||| ||| || Sbjct: 299 ccggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccg 358 Query: 385 acnccncacaggtg 398 || || |||||||| Sbjct: 359 acgcctcacaggtg 372
>gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate carboxylase/oxygenase (rbcS) mRNA, complete cds Length = 808 Score = 278 bits (140), Expect = 1e-71 Identities = 321/384 (83%), Gaps = 3/384 (0%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| |||||| || ||||||||| |||||||||| |||||||||||||||||||| Sbjct: 43 cccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtccac 102 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 ||||||| | |||||| ||||||||||||| | ||| |||||| ||||||||| || Sbjct: 103 cgccggcatgcccgtcgcccgccgctccaactcc---agcttcggcaacgtcagcaatgg 159 Query: 137 tggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 || |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 160 cggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccct 219 Query: 197 gtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccg 256 || ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| |||| Sbjct: 220 ctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgctccg 279 Query: 257 ctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaa 316 |||||||||||||| |||||||||||||||||||| || || ||| ||||||| || | Sbjct: 280 ttccaagtgggtgccctgcctcgagttcagcaaggtcggatttgtctaccgtgagaacca 339 Query: 317 cgcatntnctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 | | |||| |||||||| ||| || ||||||| |||||||||||| | ||| |||| Sbjct: 340 caagtcccctggatactacgacggcaggtactggaccatgtggaagctgcccatgttcgg 399 Query: 377 atgcnccnacnccncacaggtgct 400 ||| || || || | |||||||| Sbjct: 400 gtgcaccgacgccacccaggtgct 423
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 276 bits (139), Expect = 5e-71 Identities = 252/289 (87%), Gaps = 3/289 (1%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || || |||||| |||| || || |||||||| |||||||||||||| || || Sbjct: 3 gatggcttcgtccgccaccaccgtggcaccattccagggcctcaagtccaccgcaggact 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||| | || | | |||||||||| ||||||||||||||||||||| Sbjct: 63 ccccgtcagccgccgc---agcgcctccagcctcggcaacgtcagcaacggtggaaggat 119 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| | Sbjct: 120 caggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacct 179 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 |||||||||| |||||||||||| |||||| |||||| | |||||||||||||||| Sbjct: 180 gccaccactctcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtg 239 Query: 266 ggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcac 314 ||| || ||||| |||||||||||||| || ||||||||||| |||||| Sbjct: 240 ggttccctgccttgagttcagcaaggtgggcttcatcttccgcgagcac 288 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/47 (87%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||||| ||| || |||||||||||||||||||| | ||| |||| Sbjct: 304 tactacgacggcaggtactggacaatgtggaagctgcccatgttcgg 350
>gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 835 Score = 274 bits (138), Expect = 2e-70 Identities = 303/360 (84%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| |||||| || ||||||||| |||||||||| |||||||||||||||||||| Sbjct: 51 cccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtccac 110 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 ||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| || Sbjct: 111 cgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaatgg 170 Query: 137 tggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 || |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 171 cggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccct 230 Query: 197 gtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccg 256 || ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| |||| Sbjct: 231 ctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgctccg 290 Query: 257 ctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaa 316 |||||||||||||| |||||||||||||||||||| || ||| ||| ||||||| || | Sbjct: 291 ttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgtctaccgtgagaacca 350 Query: 317 cgcatntnctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 | || | || || ||||||||| || ||||||| |||||||||||| | ||| |||| Sbjct: 351 cagatcccccggatattacgatggcaggtactggaccatgtggaagctgcccatgttcgg 410
>gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 854 Score = 274 bits (138), Expect = 2e-70 Identities = 303/360 (84%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| |||||| || ||||||||| |||||||||| |||||||||||||||||||| Sbjct: 88 cccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtccac 147 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 ||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| || Sbjct: 148 cgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaatgg 207 Query: 137 tggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 || |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 208 cggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccct 267 Query: 197 gtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccg 256 |||||| ||||||| |||| | ||||| |||||| |||||| |||| ||||| |||| Sbjct: 268 ctcttacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctcctccg 327 Query: 257 ctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaa 316 |||||||||||||| |||||||||||||||||||| || || ||| ||||||| || | Sbjct: 328 ttccaagtgggtgccctgcctcgagttcagcaaggtcggatttgtctaccgtgagaacca 387 Query: 317 cgcatntnctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 | || | || |||||||||||| || ||||||| |||||||||||| | ||| |||| Sbjct: 388 cagatcccccggatactacgatggcaggtactggaccatgtggaagctgcccatgttcgg 447
>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ura-B Length = 787 Score = 274 bits (138), Expect = 2e-70 Identities = 216/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 420 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 480 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 539 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| |||||||||||||| || | | ||||||||| Sbjct: 540 ctcgagttcagcaaggttggcttcgtcttccgtgagcactacagctcccccgggtactac 599 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || |||||||||||||||||||| ||||| |||| ||| || || || ||||| Sbjct: 600 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 659 Query: 396 gtgct 400 ||||| Sbjct: 660 gtgct 664 Score = 153 bits (77), Expect = 5e-34 Identities = 121/135 (89%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| |||||||| Sbjct: 4 gatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggcct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 gcccgtcagccgccgctccagcggc---agcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-B Length = 728 Score = 274 bits (138), Expect = 2e-70 Identities = 216/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 361 caggtgtggccaattgagggcatcaagaagttcgagaccctatcttacttgccacccctc 420 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 421 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 480 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | |||| ||||| Sbjct: 481 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccctggttactat 540 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || |||||||||||||||||||| ||||| |||| ||| || || || ||||| Sbjct: 541 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 600 Query: 396 gtgct 400 ||||| Sbjct: 601 gtgct 605 Score = 145 bits (73), Expect = 1e-31 Identities = 120/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 ccccgtcagccgccgctccagcggc---agcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-B Length = 783 Score = 274 bits (138), Expect = 2e-70 Identities = 216/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 421 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 480 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 481 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 540 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||| ||||||||||| ||| ||||||||||||||||| | | ||||||||| Sbjct: 541 ctcgagtttagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 600 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 ||| | || |||||||||||||||||||| ||||| |||| ||| || || || ||||| Sbjct: 601 gatagtcgatactggacaatgtggaagctgcctatgttcggttgcaccgacgccacacag 660 Query: 396 gtgct 400 ||||| Sbjct: 661 gtgct 665 Score = 113 bits (57), Expect = 4e-22 Identities = 116/135 (85%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| |||||| || |||||||||||||||||||| | ||| || Sbjct: 4 gatggcttcgtcggctaccagcgtcgcacccttccaggggctcaagtccacaggcggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||||| |||||||||| ||| |||||||||||||||||||| || |||||||| Sbjct: 64 ccccgtcagtcgccgctccagaggc---agcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-A Length = 604 Score = 274 bits (138), Expect = 2e-70 Identities = 219/249 (87%) Strand = Plus / Plus Query: 152 catgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccacc 211 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 catgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacc 292 Query: 212 actcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgcc 271 ||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 293 cctctccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgcc 352 Query: 272 ttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggta 331 ||||||||||||||||||||||| ||| ||||||||||||||||| | | || || Sbjct: 353 ctgcctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccggata 412 Query: 332 ctacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccnc 391 |||||| ||||| ||||||| |||||||||||| ||||| |||| ||| || || || | Sbjct: 413 ctacgacggccgatactggactatgtggaagctgcctatgttcgggtgcaccgacgccac 472 Query: 392 acaggtgct 400 |||||||| Sbjct: 473 gcaggtgct 481 Score = 137 bits (69), Expect = 3e-29 Identities = 119/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| ||||||||| |||||||||| || |||||||| Sbjct: 64 ccccgtcagccgccgctccagcggc---agcctcggccgcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-A Length = 605 Score = 274 bits (138), Expect = 2e-70 Identities = 216/245 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacggaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || |||||||||||||||||||| ||||| |||| ||| || || || | ||| Sbjct: 418 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 477 Query: 396 gtgct 400 ||||| Sbjct: 478 gtgct 482 Score = 145 bits (73), Expect = 1e-31 Identities = 120/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 gcccgtcagccgccgctccagcggc---agcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-B Length = 772 Score = 272 bits (137), Expect = 8e-70 Identities = 215/244 (88%) Strand = Plus / Plus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 216 |||||||||| || ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 406 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctat 465 Query: 217 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 276 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 466 ccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgcc 525 Query: 277 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactacg 336 ||||||||||||||||||| ||| ||||||||||||||||| | | | |||||||||| Sbjct: 526 tcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactacg 585 Query: 337 atggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacagg 396 | || || |||||||||||||||||||| ||||| |||| ||| || || || | |||| Sbjct: 586 acggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcagg 645 Query: 397 tgct 400 |||| Sbjct: 646 tgct 649 Score = 137 bits (69), Expect = 3e-29 Identities = 119/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||| |||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 ccccgtcggccgccgctccagcggc---agcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 266 bits (134), Expect = 5e-68 Identities = 215/245 (87%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 1126 caggtgtggccaattgagggcatcaagaagtttgagaccctgtcttacttgccacccctc 1185 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 |||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1186 tccacggaagccctctcgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 1245 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | | ||||||||| Sbjct: 1246 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 1305 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || |||||||||||||||||||| ||||| |||| ||| || || || ||||| Sbjct: 1306 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 1365 Query: 396 gtgct 400 ||||| Sbjct: 1366 gtgct 1370 Score = 149 bits (75), Expect = 8e-33 Identities = 127/144 (88%), Gaps = 3/144 (2%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| |||||| || ||||| ||| ||||||| || |||||||| ||||||||||| Sbjct: 701 ccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccagggtctcaagtccac 760 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 |||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 761 agccggcctgcccgtcagccgccgctccaggggc---agcctcggcagcgtcagcaacgg 817 Query: 137 tggaaggatcaggtgcatgcaggt 160 ||||||||||||||||||||||| Sbjct: 818 cggaaggatcaggtgcatgcaggt 841
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p13-1 Length = 985 Score = 266 bits (134), Expect = 5e-68 Identities = 215/245 (87%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 602 caggtgtggccgattgagggcatcaagaagttcgagactctgtcttacttgccacccctc 661 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 662 tccacggaggccctcctgaagcaggtcgactacttgatccgctccaagtgggtgccctgc 721 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| | ||||||||||||||| | | ||||||||| Sbjct: 722 ctcgagttcagcaaggttggcttcgttttccgtgagcacaacagctcccccgggtactac 781 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 ||||| || |||||||||||||||||||| ||||| |||| ||| || || | ||||| Sbjct: 782 gatggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgctacacag 841 Query: 396 gtgct 400 ||||| Sbjct: 842 gtgct 846 Score = 165 bits (83), Expect = 1e-37 Identities = 122/135 (90%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||||||||||||||| || |||||||| |||||||| ||||||||||| Sbjct: 15 gatggcttcctcggccacctccgtcgcacccttccagggtctcaagtcgaccgccggcct 74 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| | |||| ||||| |||||||||||||||| |||||||| Sbjct: 75 gcccgtcagccgccgctccagcagcgccggcctcagcagcgtcagcaacggcggaaggat 134 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 135 caggtgcatgcaggt 149
>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B2 Length = 781 Score = 258 bits (130), Expect = 1e-65 Identities = 214/245 (87%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 414 caggtgtggccaattgagggcatcaagaagttcgagaccttgtcttacttgccacccctc 473 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 474 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 533 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | ||||||||| Sbjct: 534 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 593 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || |||||||||||||||||||| | ||| | || ||| || || || ||||| Sbjct: 594 gacggtcgatactggacaatgtggaagctgcccatgtttgggtgcaccgacgccacacag 653 Query: 396 gtgct 400 ||||| Sbjct: 654 gtgct 658 Score = 137 bits (69), Expect = 3e-29 Identities = 119/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| |||| || || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcgtcggctaccaccgttgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 ccccgtcagccgccgctcca---gcgccagcctcggcagcgtcagcaatgggggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-A Length = 605 Score = 258 bits (130), Expect = 1e-65 Identities = 214/245 (87%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaaattcgagaccctgtcttacttgccacccctc 297 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacttgatccgctccaagtgggtgccctgc 357 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | || |||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccggatactac 417 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 ||||| || |||||||||||||||||||| ||||| |||| ||| || || || ||||| Sbjct: 418 gatggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 477 Query: 396 gtgct 400 ||||| Sbjct: 478 gtgct 482 Score = 145 bits (73), Expect = 1e-31 Identities = 120/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 gcccgtcagccgccgctccagcggc---agcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A3 Length = 605 Score = 258 bits (130), Expect = 1e-65 Identities = 214/245 (87%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || ||||||||||||||||||| ||||| |||| ||| || || || | ||| Sbjct: 418 gacggacgatactggacaatgtggaagctacctatgttcgggtgcaccgacgccacgcag 477 Query: 396 gtgct 400 ||||| Sbjct: 478 gtgct 482 Score = 137 bits (69), Expect = 3e-29 Identities = 119/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || ||||||||||||||||| || ||||| || Sbjct: 4 gatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtcgacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 ccccgtcagccgccgctcca---gcgccagcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A2 Length = 605 Score = 258 bits (130), Expect = 1e-65 Identities = 214/245 (87%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || ||||||||||||||||||| ||||| |||| ||| || || || | ||| Sbjct: 418 gacggacgatactggacaatgtggaagctacctatgttcgggtgcaccgacgccacgcag 477 Query: 396 gtgct 400 ||||| Sbjct: 478 gtgct 482 Score = 145 bits (73), Expect = 1e-31 Identities = 120/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 gcccgtcagccgccgctccagcggc---agcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A1 Length = 605 Score = 258 bits (130), Expect = 1e-65 Identities = 214/245 (87%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||||||||||||| | | ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || ||||||||||||||||||| ||||| |||| ||| || || || | ||| Sbjct: 418 gacggacgatactggacaatgtggaagctacctatgttcgggtgcaccgacgccacgcag 477 Query: 396 gtgct 400 ||||| Sbjct: 478 gtgct 482 Score = 145 bits (73), Expect = 1e-31 Identities = 120/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 gcccgtcagccgccgctccagcggc---agcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B1 Length = 787 Score = 256 bits (129), Expect = 5e-65 Identities = 213/244 (87%) Strand = Plus / Plus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 216 |||||||||| || ||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 421 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccacccctat 480 Query: 217 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 276 ||||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||| Sbjct: 481 ccacggaggccctcctgaaacaggtcgactacctgatccgctcaaagtgggtgccctgcc 540 Query: 277 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactacg 336 ||||||||||||||||||| ||| ||||||||||||||||| | | |||||||||| Sbjct: 541 tcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactacg 600 Query: 337 atggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacagg 396 | ||||| |||||||||||||||||||| ||||| |||| ||| | || || |||||| Sbjct: 601 acggccgatactggacaatgtggaagctgcctatgttcgggtgcactgacgccacacagg 660 Query: 397 tgct 400 |||| Sbjct: 661 tgct 664 Score = 129 bits (65), Expect = 7e-27 Identities = 118/135 (87%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||| |||||||||||| |||| |||||| ||||||||||||| || |||||||| Sbjct: 64 ccccgtcggccgccgctccagcggc---agcctcagcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-B Length = 787 Score = 256 bits (129), Expect = 5e-65 Identities = 213/244 (87%) Strand = Plus / Plus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 216 |||||||||| || ||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 421 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccacccctat 480 Query: 217 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 276 ||||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||| Sbjct: 481 ccacggaggccctcctgaaacaggtcgactacctgatccgctcaaagtgggtgccctgcc 540 Query: 277 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactacg 336 ||||||||||||||||||| ||| ||||||||||||||||| | | |||||||||| Sbjct: 541 tcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactacg 600 Query: 337 atggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacagg 396 | ||||| |||||||||||||||||||| ||||| |||| ||| | || || |||||| Sbjct: 601 acggccgatactggacaatgtggaagctgcctatgttcgggtgcactgacgccacacagg 660 Query: 397 tgct 400 |||| Sbjct: 661 tgct 664 Score = 129 bits (65), Expect = 7e-27 Identities = 118/135 (87%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||| |||||||||||| |||| |||||| ||||||||||||| || |||||||| Sbjct: 64 ccccgtcggccgccgctccagcggc---agcctcagcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-B Length = 781 Score = 250 bits (126), Expect = 3e-63 Identities = 213/245 (86%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 414 caggtgtggccaattgagggcatcaagaagttcgagaccttgtcttacttgccacccctc 473 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 474 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 533 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 ||||||||||||||||| || || ||||||||||||||||| | | ||||||||| Sbjct: 534 ctcgagttcagcaaggtaggcatcgtcttccgtgagcacaacagctcccccgggtactac 593 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || || || |||||||||||||||||||| | ||| |||| ||| || || || ||||| Sbjct: 594 gacggtcgatactggacaatgtggaagctgcccatgttcgggtgcaccgacgccacacag 653 Query: 396 gtgct 400 ||||| Sbjct: 654 gtgct 658 Score = 153 bits (77), Expect = 5e-34 Identities = 121/135 (89%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||||||||| || Sbjct: 4 gatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccaccgccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| |||||||||||||||||||| || |||||||| Sbjct: 64 ccccgtcagccgccgctccagcggc---agcctcggcagcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-A Length = 591 Score = 250 bits (126), Expect = 3e-63 Identities = 196/221 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 224 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 283 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 |||||| |||||| | ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 284 tccacggaagccctcttgaagcaggtcgactacctgatccgctccaagtgggtaccctgc 343 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||||||| ||||||||| | | || |||||| Sbjct: 344 ctcgagttcagcaaggttggcttcgtcttccgcgagcacaacagctcccccggttactac 403 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcgg 376 || |||||| |||||||||||||||||||| ||||| |||| Sbjct: 404 gacggccggtactggacaatgtggaagctgcctatgttcgg 444 Score = 137 bits (69), Expect = 3e-29 Identities = 119/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| |||||||||| ||||||||| || |||||||| Sbjct: 64 gcccgtcagccgccgctccagcggc---agcctcggcaacgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-A Length = 605 Score = 250 bits (126), Expect = 3e-63 Identities = 196/221 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtagactacctgatccgctccaagtgggtgccctgc 357 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||| ||||||||||| ||| ||||||||||||||||| | | | ||||||||| Sbjct: 358 ctcgagtttagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 417 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcgg 376 || || || |||||||||||||||||||| ||||| |||| Sbjct: 418 gacggtcgatactggacaatgtggaagctgcctatgttcgg 458 Score = 137 bits (69), Expect = 3e-29 Identities = 119/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| ||||||||| |||||||||| || |||||||| Sbjct: 64 gcccgtcagccgccgctccagcggc---agcctcggccgcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-A Length = 605 Score = 250 bits (126), Expect = 3e-63 Identities = 196/221 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtagactacctgatccgctccaagtgggtgccctgc 357 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||| ||||||||||| ||| ||||||||||||||||| | | | ||||||||| Sbjct: 358 ctcgagtttagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 417 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcgg 376 || || || |||||||||||||||||||| ||||| |||| Sbjct: 418 gacggtcgatactggacaatgtggaagctgcctatgttcgg 458 Score = 137 bits (69), Expect = 3e-29 Identities = 119/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||| ||| ||||||| || |||||||||||||||||||| ||||| || Sbjct: 4 gatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtct 63 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||||||| |||| ||||||||| |||||||||| || |||||||| Sbjct: 64 gcccgtcagccgccgctccagcggc---agcctcggccgcgtcagcaatggcggaaggat 120 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135
>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p10-1 Length = 629 Score = 250 bits (126), Expect = 3e-63 Identities = 196/221 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 246 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 305 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 306 tccacagaggccctcctaaagcaggtagactacctgatccgctccaagtgggtgccctgc 365 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||| ||||||||||| ||| ||||||||||||||||| | | | ||||||||| Sbjct: 366 ctcgagtttagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 425 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcgg 376 || || || |||||||||||||||||||| ||||| |||| Sbjct: 426 gacggtcgatactggacaatgtggaagctgcctatgttcgg 466 Score = 113 bits (57), Expect = 4e-22 Identities = 123/144 (85%), Gaps = 6/144 (4%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| |||||| || ||||| ||| ||||||| || |||||||||||||||||||| Sbjct: 6 ccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccac 65 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 ||||| || ||||||||||||||||||| || ||||||||| |||||| ||| || Sbjct: 66 agccggtctgcccgtcagccgccgctcca-----gcgagcctcggccgcgtca-caatgg 119 Query: 137 tggaaggatcaggtgcatgcaggt 160 ||||||||||||||||||||||| Sbjct: 120 cggaaggatcaggtgcatgcaggt 143
>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39) (ribulosebisphosphate carboxylase, clone 512) Length = 611 Score = 248 bits (125), Expect = 1e-62 Identities = 179/200 (89%) Strand = Plus / Plus Query: 199 cttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgct 258 ||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 2 cttacctgccaccgctcagcacggaggccctcctcaagcaggtggactacctgatccgct 61 Query: 259 ccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacg 318 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| | Sbjct: 62 ccaagtgggtgccttgccttgagttcagcaaggtcgggttcatcttccgtgagcacaatg 121 Query: 319 catntnctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcggat 378 | | | | ||||||||||| ||||| |||||||||||||||||||| ||||| |||| | Sbjct: 122 cgtctcccgggtactacgacggccgctactggacaatgtggaagctgcctatgttcgggt 181 Query: 379 gcnccnacnccncacaggtg 398 || || || || |||||||| Sbjct: 182 gcaccgacgccacacaggtg 201
>dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full insert sequence Length = 845 Score = 194 bits (98), Expect = 2e-46 Identities = 239/286 (83%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || |||||||||||||| ||||| |||||||||||||||||||| || ||||| Sbjct: 79 gatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggcct 138 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 || || | ||||||||||| | || | ||| | |||| ||||||||| || |||||||| Sbjct: 139 cccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaaggat 198 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 ||| ||||||||||||||||| || |||||||| |||||||||||||| ||||| ||||| Sbjct: 199 cagatgcatgcaggtgtggccgattgagggcattaagaagttcgagactctgtcgtactt 258 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 ||| ||| | | ||||| ||| | |||||| |||| |||||| |||| || ||||| Sbjct: 259 gccgccattgacagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtg 318 Query: 266 ggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgag 311 |||||||||| | |||||||||||||| || ||| ||| ||||||| Sbjct: 319 ggtgccttgcttggagttcagcaaggtcggattcgtctaccgtgag 364
>dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full insert sequence Length = 1999 Score = 194 bits (98), Expect = 2e-46 Identities = 239/286 (83%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || |||||||||||||| ||||| |||||||||||||||||||| || ||||| Sbjct: 81 gatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggcct 140 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 || || | ||||||||||| | || | ||| | |||| ||||||||| || |||||||| Sbjct: 141 cccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaaggat 200 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 ||| ||||||||||||||||| || |||||||| |||||||||||||| ||||| ||||| Sbjct: 201 cagatgcatgcaggtgtggccgattgagggcattaagaagttcgagactctgtcgtactt 260 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 ||| ||| | | ||||| ||| | |||||| |||| |||||| |||| || ||||| Sbjct: 261 gccgccattgacagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtg 320 Query: 266 ggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgag 311 |||||||||| | |||||||||||||| || ||| ||| ||||||| Sbjct: 321 ggtgccttgcttggagttcagcaaggtcggattcgtctaccgtgag 366
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 620 Score = 192 bits (97), Expect = 6e-46 Identities = 207/244 (84%), Gaps = 2/244 (0%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 246 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccaccactg 305 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 |||||||||||| |||||| |||||| | ||||||||||||||||||| || ||| Sbjct: 306 tcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggttccctgc 365 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatntnctgggtacta 334 |||||||||||||||||||| ||||||||||| |||||| | ||| | | || ||||| Sbjct: 366 ctcgagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctcccggatacta 424 Query: 335 cgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncaca 394 ||| ||| || |||||||||||||||||||| | ||| |||| ||| | || || |||| Sbjct: 425 cgacggcaggtactggacaatgtggaagctgcccatgttcggctgcactgacgcctcaca 484 Query: 395 ggtg 398 |||| Sbjct: 485 ggtg 488 Score = 137 bits (69), Expect = 3e-29 Identities = 119/135 (88%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || || |||||||||||||| || |||||||| |||||||||||||| ||||| Sbjct: 3 gatggcttcttccgccacctccgtcgcgcccttccagggcctcaagtccaccgctggcct 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||| ||| | || |||||||||||||||||||||| |||||||| Sbjct: 63 ccccgtcagccgccgcagcaatgccg---gcctcggcagcgtcagcaacggcggaaggat 119 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 120 caggtgcatgcaggt 134
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 190 bits (96), Expect = 2e-45 Identities = 131/143 (91%) Strand = Plus / Plus Query: 18 cccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccacc 77 ||||||| ||||||||| |||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 11276336 cccaccgtgatggcctcgtcggccacctccgttgctcccttccaggggctcaaatccacc 11276395 Query: 78 gccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggt 137 ||||| || ||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 11276396 gccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgtcagcaacggt 11276455 Query: 138 ggaaggatcaggtgcatgcaggt 160 ||||||||||| || |||||||| Sbjct: 11276456 ggaaggatcagctgtatgcaggt 11276478 Score = 168 bits (85), Expect = 9e-39 Identities = 185/220 (84%) Strand = Plus / Minus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 216 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 10080152 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 10080093 Query: 217 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 276 | ||||| |||||| |||||| |||| |||||| |||| |||||||||||||| |||| Sbjct: 10080092 ccgtggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcc 10080033 Query: 277 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactacg 336 |||||||||||||||| || ||| ||| ||||||| || || || | || ||||||| Sbjct: 10080032 tcgagttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacg 10079973 Query: 337 atggccggnactggacaatgtggaagctgnctatgntcgg 376 ||||| || ||||||| |||||||||||| | ||| |||| Sbjct: 10079972 atggcaggtactggaccatgtggaagctgcccatgttcgg 10079933 Score = 163 bits (82), Expect = 5e-37 Identities = 185/221 (83%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 11261928 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccaccactc 11261987 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 | | ||||| || | |||||| |||| |||||| | || |||||||||||||||||| Sbjct: 11261988 accgtggaggatcttttgaagcagatcgagtacctgcttcgatccaagtgggtgccttgc 11262047 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||| ||||||| || || | | | ||||||||| Sbjct: 11262048 ctcgagttcagcaaggttggattcgtctaccgtgagaaccacaggtctcccgggtactac 11262107 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||| || | ||||| |||||||||||| | ||| |||| Sbjct: 11262108 gatggcaggtattggaccatgtggaagctgcccatgttcgg 11262148 Score = 157 bits (79), Expect = 3e-35 Identities = 188/226 (83%) Strand = Plus / Plus Query: 155 gcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccact 214 |||||||||||| || || |||||||||||||| ||||||||||| ||| ||||||| || Sbjct: 11276590 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccgct 11276649 Query: 215 cagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttg 274 || |||| |||| | |||||| |||| |||||| |||| ||||| ||||||||||| Sbjct: 11276650 cacggtcgaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttg 11276709 Query: 275 cctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtacta 334 ||||||||| || ||||| |||||| ||| ||||||| || || | | |||||||||| Sbjct: 11276710 cctcgagtttagtaaggtcgggttcgtctaccgtgagaaccacaggtctcctgggtacta 11276769 Query: 335 cgatggccggnactggacaatgtggaagctgnctatgntcggatgc 380 |||||| || ||||||| |||||||||||| ||||| |||||||| Sbjct: 11276770 tgatggcaggtactggaccatgtggaagctgcctatgttcggatgc 11276815 Score = 145 bits (73), Expect = 1e-31 Identities = 126/144 (87%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||||||| ||||||||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 11261678 ccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtccac 11261737 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 |||||| || ||||||||||||||||||| | | | || |||||| ||||||||| || Sbjct: 11261738 cgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagcaatgg 11261797 Query: 137 tggaaggatcaggtgcatgcaggt 160 |||||||||| |||||||||||| Sbjct: 11261798 cggaaggatcaagtgcatgcaggt 11261821 Score = 121 bits (61), Expect = 2e-24 Identities = 123/144 (85%) Strand = Plus / Minus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| |||||| || ||||||||| |||||||||| |||||||||||||||||||| Sbjct: 10080395 cccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtccac 10080336 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 ||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| || Sbjct: 10080335 cgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaatgg 10080276 Query: 137 tggaaggatcaggtgcatgcaggt 160 || |||||||||||||||||||| Sbjct: 10080275 cggcaggatcaggtgcatgcaggt 10080252 Score = 109 bits (55), Expect = 7e-21 Identities = 115/135 (85%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || |||||||||||||| ||||| |||||||||||||||||||| || ||||| Sbjct: 11319505 gatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggcct 11319564 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 || || | ||||||||||| | || | ||| | |||| ||||||||| || |||||||| Sbjct: 11319565 cccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaaggat 11319624 Query: 146 caggtgcatgcaggt 160 ||| ||||||||||| Sbjct: 11319625 cagatgcatgcaggt 11319639 Score = 101 bits (51), Expect = 2e-18 Identities = 105/123 (85%) Strand = Plus / Plus Query: 38 ggccacctccgtcgctcctttccaggggctcaagtccaccgccggccttcccgtcagccg 97 |||||||||||| ||||| ||||||||||||||||||||||||||||| || || ||||| Sbjct: 11264737 ggccacctccgtggctccattccaggggctcaagtccaccgccggcctcccagtgagccg 11264796 Query: 98 ccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgca 157 |||||||| | | | || ||||| | ||| |||||| |||||||||| ||||||||| Sbjct: 11264797 ccgctccaccaactcaggcttcggcgacatcaccaacggcggaaggatcaagtgcatgca 11264856 Query: 158 ggt 160 ||| Sbjct: 11264857 ggt 11264859 Score = 95.6 bits (48), Expect = 1e-16 Identities = 129/156 (82%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| ||| | Sbjct: 11319738 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgccgccattg 11319797 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 | ||||| ||| | |||||| |||| |||||| |||| || ||||||||||||||| Sbjct: 11319798 acagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgggtgccttgc 11319857 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgag 311 | |||||||||||||| || ||| ||| ||||||| Sbjct: 11319858 ttggagttcagcaaggtcggattcgtctaccgtgag 11319893 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 agtgggtgccttgcctcgagtt 283 |||||||||||||||||||||| Sbjct: 11266645 agtgggtgccttgcctcgagtt 11266666
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 190 bits (96), Expect = 2e-45 Identities = 131/143 (91%) Strand = Plus / Plus Query: 18 cccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccacc 77 ||||||| ||||||||| |||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 11276007 cccaccgtgatggcctcgtcggccacctccgttgctcccttccaggggctcaaatccacc 11276066 Query: 78 gccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggt 137 ||||| || ||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 11276067 gccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgtcagcaacggt 11276126 Query: 138 ggaaggatcaggtgcatgcaggt 160 ||||||||||| || |||||||| Sbjct: 11276127 ggaaggatcagctgtatgcaggt 11276149 Score = 168 bits (85), Expect = 9e-39 Identities = 185/220 (84%) Strand = Plus / Minus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 216 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 10080037 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 10079978 Query: 217 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 276 | ||||| |||||| |||||| |||| |||||| |||| |||||||||||||| |||| Sbjct: 10079977 ccgtggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcc 10079918 Query: 277 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactacg 336 |||||||||||||||| || ||| ||| ||||||| || || || | || ||||||| Sbjct: 10079917 tcgagttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacg 10079858 Query: 337 atggccggnactggacaatgtggaagctgnctatgntcgg 376 ||||| || ||||||| |||||||||||| | ||| |||| Sbjct: 10079857 atggcaggtactggaccatgtggaagctgcccatgttcgg 10079818 Score = 163 bits (82), Expect = 5e-37 Identities = 185/221 (83%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 11261599 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccaccactc 11261658 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 | | ||||| || | |||||| |||| |||||| | || |||||||||||||||||| Sbjct: 11261659 accgtggaggatcttttgaagcagatcgagtacctgcttcgatccaagtgggtgccttgc 11261718 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||| ||||||| || || | | | ||||||||| Sbjct: 11261719 ctcgagttcagcaaggttggattcgtctaccgtgagaaccacaggtctcccgggtactac 11261778 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||| || | ||||| |||||||||||| | ||| |||| Sbjct: 11261779 gatggcaggtattggaccatgtggaagctgcccatgttcgg 11261819 Score = 157 bits (79), Expect = 3e-35 Identities = 188/226 (83%) Strand = Plus / Plus Query: 155 gcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccact 214 |||||||||||| || || |||||||||||||| ||||||||||| ||| ||||||| || Sbjct: 11276261 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccgct 11276320 Query: 215 cagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttg 274 || |||| |||| | |||||| |||| |||||| |||| ||||| ||||||||||| Sbjct: 11276321 cacggtcgaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttg 11276380 Query: 275 cctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtacta 334 ||||||||| || ||||| |||||| ||| ||||||| || || | | |||||||||| Sbjct: 11276381 cctcgagtttagtaaggtcgggttcgtctaccgtgagaaccacaggtctcctgggtacta 11276440 Query: 335 cgatggccggnactggacaatgtggaagctgnctatgntcggatgc 380 |||||| || ||||||| |||||||||||| ||||| |||||||| Sbjct: 11276441 tgatggcaggtactggaccatgtggaagctgcctatgttcggatgc 11276486 Score = 145 bits (73), Expect = 1e-31 Identities = 126/144 (87%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||||||| ||||||||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 11261349 ccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtccac 11261408 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 |||||| || ||||||||||||||||||| | | | || |||||| ||||||||| || Sbjct: 11261409 cgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagcaatgg 11261468 Query: 137 tggaaggatcaggtgcatgcaggt 160 |||||||||| |||||||||||| Sbjct: 11261469 cggaaggatcaagtgcatgcaggt 11261492 Score = 121 bits (61), Expect = 2e-24 Identities = 123/144 (85%) Strand = Plus / Minus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| |||||| || ||||||||| |||||||||| |||||||||||||||||||| Sbjct: 10080280 cccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtccac 10080221 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 ||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| || Sbjct: 10080220 cgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaatgg 10080161 Query: 137 tggaaggatcaggtgcatgcaggt 160 || |||||||||||||||||||| Sbjct: 10080160 cggcaggatcaggtgcatgcaggt 10080137 Score = 109 bits (55), Expect = 7e-21 Identities = 115/135 (85%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || |||||||||||||| ||||| |||||||||||||||||||| || ||||| Sbjct: 11319176 gatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggcct 11319235 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 || || | ||||||||||| | || | ||| | |||| ||||||||| || |||||||| Sbjct: 11319236 cccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaaggat 11319295 Query: 146 caggtgcatgcaggt 160 ||| ||||||||||| Sbjct: 11319296 cagatgcatgcaggt 11319310 Score = 101 bits (51), Expect = 2e-18 Identities = 105/123 (85%) Strand = Plus / Plus Query: 38 ggccacctccgtcgctcctttccaggggctcaagtccaccgccggccttcccgtcagccg 97 |||||||||||| ||||| ||||||||||||||||||||||||||||| || || ||||| Sbjct: 11264408 ggccacctccgtggctccattccaggggctcaagtccaccgccggcctcccagtgagccg 11264467 Query: 98 ccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgca 157 |||||||| | | | || ||||| | ||| |||||| |||||||||| ||||||||| Sbjct: 11264468 ccgctccaccaactcaggcttcggcgacatcaccaacggcggaaggatcaagtgcatgca 11264527 Query: 158 ggt 160 ||| Sbjct: 11264528 ggt 11264530 Score = 95.6 bits (48), Expect = 1e-16 Identities = 129/156 (82%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| ||| | Sbjct: 11319409 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgccgccattg 11319468 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 | ||||| ||| | |||||| |||| |||||| |||| || ||||||||||||||| Sbjct: 11319469 acagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgggtgccttgc 11319528 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgag 311 | |||||||||||||| || ||| ||| ||||||| Sbjct: 11319529 ttggagttcagcaaggtcggattcgtctaccgtgag 11319564 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 262 agtgggtgccttgcctcgagtt 283 |||||||||||||||||||||| Sbjct: 11266316 agtgggtgccttgcctcgagtt 11266337
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 190 bits (96), Expect = 2e-45 Identities = 131/143 (91%) Strand = Plus / Minus Query: 18 cccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccacc 77 ||||||| ||||||||| |||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 95718 cccaccgtgatggcctcgtcggccacctccgttgctcccttccaggggctcaaatccacc 95659 Query: 78 gccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggt 137 ||||| || ||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 95658 gccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgtcagcaacggt 95599 Query: 138 ggaaggatcaggtgcatgcaggt 160 ||||||||||| || |||||||| Sbjct: 95598 ggaaggatcagctgtatgcaggt 95576 Score = 163 bits (82), Expect = 5e-37 Identities = 185/221 (83%) Strand = Plus / Minus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 110126 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccaccactc 110067 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 | | ||||| || | |||||| |||| |||||| | || |||||||||||||||||| Sbjct: 110066 accgtggaggatcttttgaagcagatcgagtacctgcttcgatccaagtgggtgccttgc 110007 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 |||||||||||||||||||| ||| ||| ||||||| || || | | | ||||||||| Sbjct: 110006 ctcgagttcagcaaggttggattcgtctaccgtgagaaccacaggtctcccgggtactac 109947 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||| || | ||||| |||||||||||| | ||| |||| Sbjct: 109946 gatggcaggtattggaccatgtggaagctgcccatgttcgg 109906 Score = 157 bits (79), Expect = 3e-35 Identities = 188/226 (83%) Strand = Plus / Minus Query: 155 gcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccact 214 |||||||||||| || || |||||||||||||| ||||||||||| ||| ||||||| || Sbjct: 95464 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccgct 95405 Query: 215 cagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttg 274 || |||| |||| | |||||| |||| |||||| |||| ||||| ||||||||||| Sbjct: 95404 cacggtcgaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttg 95345 Query: 275 cctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtacta 334 ||||||||| || ||||| |||||| ||| ||||||| || || | | |||||||||| Sbjct: 95344 cctcgagtttagtaaggtcgggttcgtctaccgtgagaaccacaggtctcctgggtacta 95285 Query: 335 cgatggccggnactggacaatgtggaagctgnctatgntcggatgc 380 |||||| || ||||||| |||||||||||| ||||| |||||||| Sbjct: 95284 tgatggcaggtactggaccatgtggaagctgcctatgttcggatgc 95239 Score = 145 bits (73), Expect = 1e-31 Identities = 126/144 (87%) Strand = Plus / Minus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||||||| ||||||||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 110376 ccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtccac 110317 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 |||||| || ||||||||||||||||||| | | | || |||||| ||||||||| || Sbjct: 110316 cgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagcaatgg 110257 Query: 137 tggaaggatcaggtgcatgcaggt 160 |||||||||| |||||||||||| Sbjct: 110256 cggaaggatcaagtgcatgcaggt 110233 Score = 109 bits (55), Expect = 7e-21 Identities = 115/135 (85%) Strand = Plus / Minus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || |||||||||||||| ||||| |||||||||||||||||||| || ||||| Sbjct: 52549 gatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggcct 52490 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 || || | ||||||||||| | || | ||| | |||| ||||||||| || |||||||| Sbjct: 52489 cccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaaggat 52430 Query: 146 caggtgcatgcaggt 160 ||| ||||||||||| Sbjct: 52429 cagatgcatgcaggt 52415 Score = 101 bits (51), Expect = 2e-18 Identities = 105/123 (85%) Strand = Plus / Minus Query: 38 ggccacctccgtcgctcctttccaggggctcaagtccaccgccggccttcccgtcagccg 97 |||||||||||| ||||| ||||||||||||||||||||||||||||| || || ||||| Sbjct: 107317 ggccacctccgtggctccattccaggggctcaagtccaccgccggcctcccagtgagccg 107258 Query: 98 ccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgca 157 |||||||| | | | || ||||| | ||| |||||| |||||||||| ||||||||| Sbjct: 107257 ccgctccaccaactcaggcttcggcgacatcaccaacggcggaaggatcaagtgcatgca 107198 Query: 158 ggt 160 ||| Sbjct: 107197 ggt 107195 Score = 95.6 bits (48), Expect = 1e-16 Identities = 129/156 (82%) Strand = Plus / Minus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| ||| | Sbjct: 52316 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgccgccattg 52257 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 | ||||| ||| | |||||| |||| |||||| |||| || ||||||||||||||| Sbjct: 52256 acagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgggtgccttgc 52197 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgag 311 | |||||||||||||| || ||| ||| ||||||| Sbjct: 52196 ttggagttcagcaaggtcggattcgtctaccgtgag 52161 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 262 agtgggtgccttgcctcgagtt 283 |||||||||||||||||||||| Sbjct: 105409 agtgggtgccttgcctcgagtt 105388
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 593 Score = 188 bits (95), Expect = 9e-45 Identities = 191/222 (86%), Gaps = 2/222 (0%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||| ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 219 caggtatggccgattgagggcatcaagaagttcgagaccctgtcttacctgccaccactc 278 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 |||||||||||| |||||| | |||| | ||||||||||||||||||| || ||| Sbjct: 279 tcagaggaggccctcctgaagcagattgacttcttgatccgctccaagtgggttccctgc 338 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatntnctgggtacta 334 |||||||||||||||||||| ||||||||||| |||||| | ||| | | || ||||| Sbjct: 339 ctcgagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctcccggatacta 397 Query: 335 cgatggccggnactggacaatgtggaagctgnctatgntcgg 376 ||||||| || |||||||||||||||||||| | ||| |||| Sbjct: 398 cgatggcaggtactggacaatgtggaagctgcccatgttcgg 439 Score = 105 bits (53), Expect = 1e-19 Identities = 115/135 (85%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||||||||| ||||| || |||||||| ||||||||||| || ||||| Sbjct: 3 gatggcttcttcggccacctctgtcgccccattccagggcctcaagtccactgctggcct 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||||||||| ||| ||| || |||| ||||||||||||||||||||||| || Sbjct: 63 tcccgtcagccgtcgcagcaa---tgcgggccttggcagcgtcagcaacggtggaagaat 119 Query: 146 caggtgcatgcaggt 160 ||| ||||||||||| Sbjct: 120 cagatgcatgcaggt 134
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, nuclear gene encoding chloroplast protein, partial cds Length = 594 Score = 182 bits (92), Expect = 6e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 279 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 |||||||||||| |||||| |||||| | ||||||||||||||||||| || ||| Sbjct: 280 tctgaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggttccctgc 339 Query: 276 ctcgagttcagcaaggttgggttcatcttccg 307 || ||||||||||||||||| ||||||||||| Sbjct: 340 cttgagttcagcaaggttggcttcatcttccg 371 Score = 121 bits (61), Expect = 2e-24 Identities = 117/135 (86%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || || ||||||||||| || || |||||||| |||||||||||||| ||||| Sbjct: 3 gatggcttcgtccgccacctccgttgcgcccttccagggcctcaagtccaccgctggcct 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||||||||||| ||| | || |||||||||||||||||||||| |||||||| Sbjct: 63 cgccgtcagccgccgcagcaatgccg---gcctcggcagcgtcagcaacggcggaaggat 119 Query: 146 caggtgcatgcaggt 160 ||||||||||||||| Sbjct: 120 caggtgcatgcaggt 134 Score = 46.1 bits (23), Expect = 0.087 Identities = 55/68 (80%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacncc 389 |||||||| ||| || ||||||||||||||||| || | ||| |||| ||| | || || Sbjct: 394 tactacgacggcaggtactggacaatgtggaagttgcccatgttcggctgcacagacgcc 453 Query: 390 ncacaggt 397 ||||||| Sbjct: 454 tcacaggt 461
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 586 Score = 178 bits (90), Expect = 9e-42 Identities = 141/158 (89%) Strand = Plus / Plus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 216 |||||||||| || |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 213 aggtgtggccgattgagggcatcaagaagttcgagaccctttcttacttgccaccactct 272 Query: 217 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 276 |||||||||||| |||||| |||||| | ||||||||||||||||||| || |||| Sbjct: 273 cagaggaggccctcctaaagcagatcgacttcttgatccgctccaagtgggttccctgcc 332 Query: 277 tcgagttcagcaaggttgggttcatcttccgtgagcac 314 | ||||||||||||||||| ||||||||||| |||||| Sbjct: 333 ttgagttcagcaaggttggcttcatcttccgcgagcac 370 Score = 153 bits (77), Expect = 5e-34 Identities = 121/135 (89%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || ||||||||||||||||| || |||||||| |||||||||||||| ||||| Sbjct: 3 gatggcttcttcggccacctccgtcgcgcccttccagggcctcaagtccaccgctggcct 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 ||||||||||||||| || || | | |||||||||||||||||||||||||||||||| Sbjct: 63 tcccgtcagccgccg---cagcgcctccagcctcggcagcgtcagcaacggtggaaggat 119 Query: 146 caggtgcatgcaggt 160 ||| ||||||||||| Sbjct: 120 cagatgcatgcaggt 134 Score = 56.0 bits (28), Expect = 9e-05 Identities = 57/69 (82%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacncc 389 |||||||| ||| || ||||||||||||||||| || | ||| |||| ||| || || || Sbjct: 386 tactacgacggcaggtactggacaatgtggaagttgcccatgttcgggtgcaccgacgcc 445 Query: 390 ncacaggtg 398 |||||||| Sbjct: 446 tcacaggtg 454
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ave-A Length = 590 Score = 174 bits (88), Expect = 1e-40 Identities = 204/243 (83%), Gaps = 2/243 (0%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 223 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttatctgccaccactg 282 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 |||||||||| | |||||| |||||| ||||||||||||||||||||| || ||| Sbjct: 283 tcagaggaggccctcttgaagcagatcgacttcctgatccgctccaagtgggttccctgc 342 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatntnctgggtacta 334 || |||||||||||||| || |||||||||||||||||| | ||| | | || ||||| Sbjct: 343 ctggagttcagcaaggtgggcttcatcttccgtgagcacggcagca-ctcccggatacta 401 Query: 335 cgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncaca 394 ||| ||| || |||||||||||||||||||| | ||| |||| ||| || || || | || Sbjct: 402 cgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccgacgcctccca 461 Query: 395 ggt 397 ||| Sbjct: 462 ggt 464 Score = 125 bits (63), Expect = 1e-25 Identities = 110/125 (88%), Gaps = 3/125 (2%) Strand = Plus / Plus Query: 36 tcggccacctccgtcgctcctttccaggggctcaagtccaccgccggccttcccgtcagc 95 ||||| ||||||||||| || |||||||| ||||||||||| || |||||||||||| || Sbjct: 14 tcggcgacctccgtcgcccccttccagggcctcaagtccactgctggccttcccgtcggc 73 Query: 96 cgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatg 155 |||||| ||||| || ||||||||| |||||||||||||||||||||||| |||||| Sbjct: 74 cgccgcagcaacgccg---gcctcggcaacgtcagcaacggtggaaggatcagatgcatg 130 Query: 156 caggt 160 ||||| Sbjct: 131 caggt 135
>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 600 Score = 172 bits (87), Expect = 6e-40 Identities = 141/159 (88%) Strand = Plus / Plus Query: 156 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 215 ||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 226 caggtgtggccgactgagggcatcaagaagttcgagaccctttcttacctgccaccactc 285 Query: 216 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 275 | |||||||||||| || ||| |||||| | ||||||||||||||||||| || ||| Sbjct: 286 tccgaggaggccctcctgaaacagatcgacttcttgatccgctccaagtgggttccctgc 345 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcac 314 |||||||||||||||||||| ||||||||||| |||||| Sbjct: 346 ctcgagttcagcaaggttggcttcatcttccgcgagcac 384 Score = 113 bits (57), Expect = 4e-22 Identities = 116/135 (85%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 |||||| || || |||||||||||||| ||||||||||| ||||||||||| || || || Sbjct: 3 gatggcttcgtccgccacctccgtcgcgcctttccagggcctcaagtccacggcagggct 62 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||||||||||| || || | | ||||| ||||||||||||||||||||||| || Sbjct: 63 ccccgtcagccgccg---cagcgcctccagcctgggcagcgtcagcaacggtggaagaat 119 Query: 146 caggtgcatgcaggt 160 ||| ||||||||||| Sbjct: 120 cagatgcatgcaggt 134 Score = 54.0 bits (27), Expect = 4e-04 Identities = 56/68 (82%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacncc 389 |||||||| ||| || |||||||||||||||||||| | ||| |||| ||| || || || Sbjct: 400 tactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccgacgcc 459 Query: 390 ncacaggt 397 | ||||| Sbjct: 460 tcccaggt 467
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 168 bits (85), Expect = 9e-39 Identities = 185/220 (84%) Strand = Plus / Plus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 216 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 82469 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 82528 Query: 217 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 276 | ||||| |||||| |||||| |||| |||||| |||| |||||||||||||| |||| Sbjct: 82529 ccgtggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcc 82588 Query: 277 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactacg 336 |||||||||||||||| || ||| ||| ||||||| || || || | || ||||||| Sbjct: 82589 tcgagttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacg 82648 Query: 337 atggccggnactggacaatgtggaagctgnctatgntcgg 376 ||||| || ||||||| |||||||||||| | ||| |||| Sbjct: 82649 atggcaggtactggaccatgtggaagctgcccatgttcgg 82688 Score = 121 bits (61), Expect = 2e-24 Identities = 123/144 (85%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| |||||| || ||||||||| |||||||||| |||||||||||||||||||| Sbjct: 82226 cccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtccac 82285 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 ||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| || Sbjct: 82286 cgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaatgg 82345 Query: 137 tggaaggatcaggtgcatgcaggt 160 || |||||||||||||||||||| Sbjct: 82346 cggcaggatcaggtgcatgcaggt 82369
>emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit (RuBPC; EC 4.1.1.39) Length = 830 Score = 153 bits (77), Expect = 5e-34 Identities = 220/267 (82%), Gaps = 3/267 (1%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 ||||||||| ||||||||| |||||||||| |||||||||||||||||||||||| |||| Sbjct: 83 gatggcctcgtcggccaccgccgtcgctccgttccaggggctcaagtccaccgccagcct 142 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||| |||||||||| | | |||||||||| |||||||||||| |||||||| Sbjct: 143 ccccgtcgcccgccgctcctccaga---agcctcggcaacgtcagcaacggcggaaggat 199 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 | ||||||||||||||||||| | | |||| ||||||||||||||| ||||| ||| | Sbjct: 200 ccggtgcatgcaggtgtggccggcctacggcaacaagaagttcgagacgctgtcgtacct 259 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 ||| || || ||||| | ||| || |||||||| ||||||||| | ||| | || Sbjct: 260 gccgccgctgtcgacggacgacctgctgaagcaggtggactacctgctgcgcaacggctg 319 Query: 266 ggtgccttgcctcgagttcagcaaggt 292 | | || |||||||||||||||||||| Sbjct: 320 gataccctgcctcgagttcagcaaggt 346 Score = 44.1 bits (22), Expect = 0.34 Identities = 40/47 (85%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||||| ||||| ||||||| |||||||||||| | ||| |||| Sbjct: 384 tactacgacggccgctactggaccatgtggaagctgcccatgttcgg 430
>dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small subunit, complete cds Length = 830 Score = 153 bits (77), Expect = 5e-34 Identities = 220/267 (82%), Gaps = 3/267 (1%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 ||||||||| ||||||||| |||||||||| |||||||||||||||||||||||| |||| Sbjct: 83 gatggcctcgtcggccaccgccgtcgctccgttccaggggctcaagtccaccgccagcct 142 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||| |||||||||| | | |||||||||| |||||||||||| |||||||| Sbjct: 143 ccccgtcgcccgccgctcctccaga---agcctcggcaacgtcagcaacggcggaaggat 199 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 | ||||||||||||||||||| | | |||| ||||||||||||||| ||||| ||| | Sbjct: 200 ccggtgcatgcaggtgtggccggcctacggcaacaagaagttcgagacgctgtcgtacct 259 Query: 206 gccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtg 265 ||| || || ||||| | ||| || |||||||| ||||||||| | ||| | || Sbjct: 260 gccgccgctgtcgacggacgacctgctgaagcaggtggactacctgctgcgcaacggctg 319 Query: 266 ggtgccttgcctcgagttcagcaaggt 292 | | || |||||||||||||||||||| Sbjct: 320 gataccctgcctcgagttcagcaaggt 346 Score = 44.1 bits (22), Expect = 0.34 Identities = 40/47 (85%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||||| ||||| ||||||| |||||||||||| | ||| |||| Sbjct: 384 tactacgacggccgctactggaccatgtggaagctgcccatgttcgg 430
>emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1648 Score = 129 bits (65), Expect = 7e-27 Identities = 118/135 (87%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 ||||||||| ||||||||| |||||||||| |||||||||||||||||||||||| |||| Sbjct: 508 gatggcctcgtcggccaccgccgtcgctccgttccaggggctcaagtccaccgccagcct 567 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||| |||||||||| | | |||||||||| |||||||||||| |||||||| Sbjct: 568 ccccgtcgcccgccgctcctccag---aagcctcggcaacgtcagcaacggcggaaggat 624 Query: 146 caggtgcatgcaggt 160 | ||||||||||||| Sbjct: 625 ccggtgcatgcaggt 639 Score = 44.1 bits (22), Expect = 0.34 Identities = 40/47 (85%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||||| ||||| ||||||| |||||||||||| | ||| |||| Sbjct: 969 tactacgacggccgctactggaccatgtggaagctgcccatgttcgg 1015 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 tgcctcgagttcagcaaggt 292 |||||||||||||||||||| Sbjct: 912 tgcctcgagttcagcaaggt 931
>emb|X07515.1|OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1110 Score = 125 bits (63), Expect = 1e-25 Identities = 197/242 (81%), Gaps = 2/242 (0%) Strand = Plus / Plus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 216 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 492 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 551 Query: 217 gcacggaggccctccttaagcaggtcgactacct-gatccgctccaagtgggtgccttgc 275 | ||||| |||||| |||||| |||| ||||| | |||| ||||||| |||||| ||| Sbjct: 552 ccgtggaggacctcctgaagcagatcgagtacctagctccgttccaagt-ggtgccctgc 610 Query: 276 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatntnctgggtactac 335 ||||||||||||||||| || || ||| ||||||| || || | |||| |||||| Sbjct: 611 ctcgagttcagcaaggtcggatttgtctaccgtgagaaccacaagtcccctggatactac 670 Query: 336 gatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacnccncacag 395 || ||| || ||||||| |||||||||||| | ||| |||| ||| || || || | ||| Sbjct: 671 gacggcaggtactggaccatgtggaagctgcccatgttcgggtgcaccgacgccacccag 730 Query: 396 gt 397 || Sbjct: 731 gt 732 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/67 (89%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| |||||| || ||||||||| |||||||||| |||||||| ||||||||||| Sbjct: 266 cccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggg-ctcaagtccac 324 Query: 77 cgccggc 83 ||||||| Sbjct: 325 cgccggc 331 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 aggatcaggtgcatgcaggt 160 |||||||||||||||||||| Sbjct: 384 aggatcaggtgcatgcaggt 403
>dbj|AB067656.1| Oryza sativa (japonica cultivar-group) OsrbcS gene for small subunit of ribulose-1,5-bisphosphate carboxylase, promoter region and partial cds Length = 1815 Score = 121 bits (61), Expect = 2e-24 Identities = 123/144 (85%) Strand = Plus / Plus Query: 17 ccccaccgngatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccac 76 |||| ||| |||||| || ||||||||| |||||||||| |||||||||||||||||||| Sbjct: 1556 cccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtccac 1615 Query: 77 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 136 ||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| || Sbjct: 1616 cgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaatgg 1675 Query: 137 tggaaggatcaggtgcatgcaggt 160 || |||||||||||||||||||| Sbjct: 1676 cggcaggatcaggtgcatgcaggt 1699
>gb|AY103730.1| Zea mays PCO095823 mRNA sequence Length = 1172 Score = 113 bits (57), Expect = 4e-22 Identities = 152/183 (83%), Gaps = 3/183 (1%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 ||||||||| ||||| ||| ||||||| || |||||||| ||||||||| ||||| |||| Sbjct: 203 gatggcctcgtcggcaaccgccgtcgccccgttccagggtctcaagtccgccgccagcct 262 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||| ||||||| || | | |||||||||| |||||||||||| |||||||| Sbjct: 263 ccccgtcgcccgccgcagcaccagg---agcctcggcaacgtcagcaacggcggaaggat 319 Query: 146 caggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 | ||||||||||||||||||| | | |||| ||||||||||||||| ||||| ||| | Sbjct: 320 ccggtgcatgcaggtgtggccggcctacggcaacaagaagttcgagacgctgtcgtacct 379 Query: 206 gcc 208 ||| Sbjct: 380 gcc 382 Score = 44.1 bits (22), Expect = 0.34 Identities = 40/47 (85%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||||| ||||| ||||||| |||||||||||| | ||| |||| Sbjct: 504 tactacgacggccgctactggaccatgtggaagctgcccatgttcgg 550
>gb|M86717.1|SCFBCS1A Saccharum hybrid cultivar H32-8560 ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit gene, complete cds Length = 2328 Score = 101 bits (51), Expect = 2e-18 Identities = 134/160 (83%), Gaps = 4/160 (2%) Strand = Plus / Plus Query: 1 tagtacagccatggcgccccaccgngatggcctcatcggccacctccgtcgctcctttcc 60 |||| |||||||||||| | |||| ||||||||| || |||||| ||| ||||| |||| Sbjct: 1162 tagtccagccatggcgctc-accgtgatggcctcgtccgccaccgccgctgctccgttcc 1220 Query: 61 aggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgctagcctcg 120 |||||||||||||||||||| |||| |||||| ||| ||||||| | | ||||||| Sbjct: 1221 aggggctcaagtccaccgccagcctccccgtcgcccgacgctcca---ccaccagcctcg 1277 Query: 121 gcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 160 || ||||||||||| ||||||||| ||||||||||||| Sbjct: 1278 ccaaagtcagcaacggcggaaggatccggtgcatgcaggt 1317 Score = 60.0 bits (30), Expect = 6e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 234 aagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaagg 291 |||||||| ||||||||| | ||| ||| |||||||| ||||||||||||||||||| Sbjct: 1486 aagcaggtggactacctgctgcgcaacaactgggtgccctgcctcgagttcagcaagg 1543 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/47 (87%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||||| |||||| ||||||| |||||||||||| | ||| |||| Sbjct: 1582 tactacgacggccggtactggaccatgtggaagctgcccatgttcgg 1628
>gb|AY693395.1| Lolium perenne ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 195 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 222 gaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgag 281 ||||||||||| |||||| |||||| ||||||||||||| ||||| || ||| | ||| Sbjct: 28 gaggccctcctgaagcagatcgactttttgatccgctccaaatgggttccctgcttggag 87 Query: 282 ttcagcaaggttgggttcatcttccgtgag 311 |||||||||||||| ||||||||||||||| Sbjct: 88 ttcagcaaggttggcttcatcttccgtgag 117 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/47 (87%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||||| ||| || |||||||||||||||||||| | ||| |||| Sbjct: 136 tactacgacggcaggtactggacaatgtggaagctgcccatgttcgg 182
>emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene Length = 1274 Score = 89.7 bits (45), Expect = 6e-15 Identities = 113/135 (83%), Gaps = 3/135 (2%) Strand = Plus / Plus Query: 26 gatggcctcatcggccacctccgtcgctcctttccaggggctcaagtccaccgccggcct 85 ||||||||| ||||| ||| ||||||| || |||||||| ||||||||| ||||| |||| Sbjct: 213 gatggcctcgtcggcaaccgccgtcgccccgttccagggtctcaagtccgccgccagcct 272 Query: 86 tcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaaggat 145 |||||| ||||||| || | | |||||||||| |||||||||||| |||||||| Sbjct: 273 ccccgtcgcccgccgcagcaccagg---agcctcggcaacgtcagcaacggcggaaggat 329 Query: 146 caggtgcatgcaggt 160 | ||||||||||||| Sbjct: 330 ccggtgcatgcaggt 344 Score = 48.1 bits (24), Expect = 0.022 Identities = 56/69 (81%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnacncc 389 |||||||| ||||| ||||||| |||||||||||| | ||| |||| ||| || || || Sbjct: 632 tactacgacggccgctactggaccatgtggaagctgcccatgttcggctgcaccgacgcc 691 Query: 390 ncacaggtg 398 | |||||| Sbjct: 692 acgcaggtg 700 Score = 44.1 bits (22), Expect = 0.34 Identities = 49/58 (84%) Strand = Plus / Plus Query: 151 gcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgcc 208 |||||||||||||||| | | |||| ||||||||||||||| ||||| ||| |||| Sbjct: 453 gcatgcaggtgtggccggcctacggcaacaagaagttcgagacgctgtcgtacctgcc 510
>gb|AF034479.1| Zantedeschia aethiopica ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 968 Score = 73.8 bits (37), Expect = 4e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 148 ggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgc 207 ||||||||||||||||||| ||||||| |||||||||||||||||||| ||| ||| Sbjct: 204 ggtgcatgcaggtgtggccgccggagggcaagaagaagttcgagaccctgtcctacctgc 263 Query: 208 caccactca 216 ||||||||| Sbjct: 264 caccactca 272 Score = 42.1 bits (21), Expect = 1.4 Identities = 59/74 (79%) Strand = Plus / Plus Query: 327 gggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgcnccnac 386 ||||||||||| || || ||||||| ||||||||| || | ||| |||| ||| || || Sbjct: 383 gggtactacgacgggcgctactggaccatgtggaagttgcccatgttcgggtgcaccgac 442 Query: 387 nccncacaggtgct 400 || | |||||||| Sbjct: 443 tcctcccaggtgct 456
>gb|AY023648.1| Oryza sativa microsatellite MRG5973 containing (TTC)X13, closest to marker S10704, genomic sequence Length = 239 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 216 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 173 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 232 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 118 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 160 |||||| ||||||||| || || |||||||||||||||||||| Sbjct: 31 tcggcaacgtcagcaatggcggcaggatcaggtgcatgcaggt 73
>gb|AF039015.1|AF039015 Fritillaria agrestis clone TA1 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/52 (90%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||||||||||||| ||| |||||||||||||||||||| | ||| |||| Sbjct: 488 ctgggtactacgatgggcggtactggacaatgtggaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 5.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccct 196 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039013.1|AF039013 Fritillaria agrestis clone TA26 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/52 (90%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||||||||||||| ||| |||||||||||||||||||| | ||| |||| Sbjct: 488 ctgggtactacgatgggcggtactggacaatgtggaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 5.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccct 196 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039009.1|AF039009 Fritillaria agrestis clone TA23 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/52 (90%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||||||||||||| ||| |||||||||||||||||||| | ||| |||| Sbjct: 488 ctgggtactacgatggacggtactggacaatgtggaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 5.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccct 196 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF024574.1|AF024574 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type III (rbcS3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 69.9 bits (35), Expect = 6e-09 Identities = 47/52 (90%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||||||||||||| ||| |||||||||||||||||||| | ||| |||| Sbjct: 368 ctgggtactacgatgggcggtactggacaatgtggaagctgcccatgttcgg 419 Score = 40.1 bits (20), Expect = 5.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 149 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 192 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 239
>gb|AF039012.1|AF039012 Fritillaria agrestis clone TA27 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/52 (88%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||||||||||||| ||| |||||||||||| ||||||| | ||| |||| Sbjct: 488 ctgggtactacgatgggcggtactggacaatgttgaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 5.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccct 196 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039010.1|AF039010 Fritillaria agrestis clone TA24 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/52 (88%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||||||||||||| || |||||||||||||||||||| | ||| |||| Sbjct: 488 ctgggtactacgatgggcgctactggacaatgtggaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 5.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccct 196 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF031543.1|AF031543 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase small subunit type IV (rbcS4) mRNA, complete cds Length = 732 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/52 (88%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||||||||||||| || |||||||||||||||||||| | ||| |||| Sbjct: 363 ctgggtactacgatgggcgctactggacaatgtggaagctgccgatgttcgg 414 Score = 40.1 bits (20), Expect = 5.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 149 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 187 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 234
>gb|AF024572.1|AF024572 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type I (rbcS1) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 713 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/52 (88%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||||||||||||| || |||||||||||||||||||| | ||| |||| Sbjct: 362 ctgggtactacgatgggcgctactggacaatgtggaagctgccgatgttcgg 413 Score = 40.1 bits (20), Expect = 5.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 149 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 186 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 233
>gb|AF008214.1|AF008214 Musa acuminata ribulose-1,5-bisphosphate carboxylase small subunit (rbcS1) mRNA, complete cds Length = 853 Score = 61.9 bits (31), Expect = 1e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 149 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 199 ||||||| |||||||||| ||||||||| | |||||||| ||||||||||| Sbjct: 239 gtgcatgaaggtgtggccgatcgagggcgtgaagaagtttgagaccctgtc 289 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/50 (86%) Strand = Plus / Plus Query: 327 gggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 ||||||||||| || ||| ||||||| |||||||||||| | ||| |||| Sbjct: 417 gggtactacgacgggcggtactggaccatgtggaagctgcccatgttcgg 466
>gb|AF039007.1|AF039007 Fritillaria agrestis clone TA10 rbcS pseudogene, partial sequence Length = 584 Score = 60.0 bits (30), Expect = 6e-06 Identities = 38/41 (92%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctg 365 |||||||||||||||| || |||||||||||||||||||| Sbjct: 477 ctgggtactacgatgggcgctactggacaatgtggaagctg 517 Score = 40.1 bits (20), Expect = 5.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccct 196 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 233 aggtctggcccatcgtggggttgaagaagttcgagaccct 272
>gb|AF039006.1|AF039006 Fritillaria agrestis clone TA17 rbcS pseudogene, partial sequence Length = 584 Score = 60.0 bits (30), Expect = 6e-06 Identities = 38/41 (92%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctg 365 |||||||||||||||| || |||||||||||||||||||| Sbjct: 477 ctgggtactacgatgggcgctactggacaatgtggaagctg 517 Score = 40.1 bits (20), Expect = 5.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccct 196 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 233 aggtctggcccatcgtggggttgaagaagttcgagaccct 272
>gb|AF039005.1|AF039005 Fritillaria agrestis clone TA13 rbcS pseudogene, partial sequence Length = 584 Score = 60.0 bits (30), Expect = 6e-06 Identities = 38/41 (92%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctg 365 |||||||||||||||| || |||||||||||||||||||| Sbjct: 477 ctgggtactacgatgggcgctactggacaatgtggaagctg 517
>gb|DQ418485.1| Zingiber officinale ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, partial cds; chloroplast Length = 367 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 148 ggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 ||||||||||||||||||| |||||||| | ||||||||||| ||||| Sbjct: 172 ggtgcatgcaggtgtggccgatcgaggggaagaagaagttcgaaaccct 220
>emb|X17231.1|LGRBCS5B Lemna gibba rbcS gene SSU5B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 800 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 128 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 187 ||||||||| || ||| | || ||||||||||||||||| |||||| |||||||||| Sbjct: 147 cagcaacggcggcagggttagctgcatgcaggtgtggccgccggagggcctcaagaagtt 206 Query: 188 cgagaccct 196 ||||||||| Sbjct: 207 cgagaccct 215 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/50 (86%) Strand = Plus / Plus Query: 327 gggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 ||||||||||| || ||| ||||||| |||||||||||| | ||| |||| Sbjct: 447 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgg 496
>emb|X17230.1|LGRBCS5A Lemna gibba rbcS gene SSU5A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 858 Score = 58.0 bits (29), Expect = 2e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 128 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 187 ||||||||| || ||| | || ||||||||||||||||| |||||| |||||||||| Sbjct: 147 cagcaacggcggcagggttagctgcatgcaggtgtggccgccggagggcctcaagaagtt 206 Query: 188 cgagaccct 196 ||||||||| Sbjct: 207 cgagaccct 215 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/50 (86%) Strand = Plus / Plus Query: 327 gggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 ||||||||||| || ||| ||||||| |||||||||||| | ||| |||| Sbjct: 423 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgg 472
>ref|NM_123204.3| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38430 mRNA, complete cds Length = 808 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 375 tactacgatggacggtactggacaatgtggaagct 409
>ref|NM_123202.2| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38410 transcript variant AT5G38410.1 mRNA, complete cds Length = 925 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 397 tactacgatggacggtactggacaatgtggaagct 431
>ref|NM_001036904.1| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38410 transcript variant AT5G38410.2 mRNA, complete cds Length = 963 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 435 tactacgatggacggtactggacaatgtggaagct 469
>gb|AY143814.1| Arabidopsis thaliana At5g38430/F1O19.10 mRNA, complete cds Length = 546 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 346 tactacgatggacggtactggacaatgtggaagct 380
>gb|BT000721.1| Arabidopsis thaliana clone RAFL04-15-J15 (R09791) putative ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (At5g38410) mRNA, complete cds Length = 772 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 398 tactacgatggacggtactggacaatgtggaagct 432
>gb|AY142543.1| Arabidopsis thaliana clone RAFL04-14-I04 (R09825) mRNA sequence Length = 2116 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 1751 tactacgatggacggtactggacaatgtggaagct 1785
>gb|AY051025.1| Arabidopsis thaliana putative RuBisCO small 3b subunit precursor (At5g38410) mRNA, complete cds Length = 577 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 346 tactacgatggacggtactggacaatgtggaagct 380
>gb|AF360124.1| Arabidopsis thaliana putative ribulose bisphosphate carboxylase small chain 3b precursor (At5g38410) mRNA, complete cds Length = 720 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 397 tactacgatggacggtactggacaatgtggaagct 431
>gb|AY098970.1| Arabidopsis thaliana At5g38410/F1O19.10 mRNA, complete cds Length = 546 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 346 tactacgatggacggtactggacaatgtggaagct 380
>gb|AF462822.1|AF462822 Arabidopsis thaliana At5g38410/F1O19.10 mRNA, complete cds Length = 764 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 397 tactacgatggacggtactggacaatgtggaagct 431
>gb|AY065026.1| Arabidopsis thaliana AT5g53140/MFH8_8 mRNA, complete cds Length = 2204 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 21 tactacgatggacggtactggacaatgtggaagct 55
>gb|AY064686.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (At5g38410; MXI10.13) mRNA, complete cds Length = 595 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 346 tactacgatggacggtactggacaatgtggaagct 380
>gb|AY054552.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (At5g38410; MXI10.13) mRNA, complete cds Length = 772 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 389 tactacgatggacggtactggacaatgtggaagct 423
>gb|AF410314.1|AF410314 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds Length = 728 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 397 tactacgatggacggtactggacaatgtggaagct 431
>gb|AF410283.1|AF410283 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds Length = 652 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 372 tactacgatggacggtactggacaatgtggaagct 406
>emb|BX830542.1|CNS0A26B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB8ZB01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 538 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 172 tactacgatggacggtactggacaatgtggaagct 206
>emb|BX833384.1|CNS0A1LA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL51ZA07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 703 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 373 tactacgatggacggtactggacaatgtggaagct 407
>emb|BX830381.1|CNS0A1HW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 717 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 355 tactacgatggacggtactggacaatgtggaagct 389
>emb|BX830099.1|CNS0A1FH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB59ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 372 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 79 tactacgatggacggtactggacaatgtggaagct 113
>emb|BX832776.1|CNS0A0L8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL10ZE03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 715 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 385 tactacgatggacggtactggacaatgtggaagct 419
>emb|BX831203.1|CNS0A0SX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS68ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 706 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 374 tactacgatggacggtactggacaatgtggaagct 408
>emb|BX833789.1|CNS0A0DD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL77ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 700 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 368 tactacgatggacggtactggacaatgtggaagct 402
>emb|BX833660.1|CNS0A0FN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL69ZD11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 716 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 384 tactacgatggacggtactggacaatgtggaagct 418
>emb|BX833317.1|CNS0A0CV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZC08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 733 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 384 tactacgatggacggtactggacaatgtggaagct 418
>emb|BX832874.1|CNS0A0CD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL19ZB09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 709 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 379 tactacgatggacggtactggacaatgtggaagct 413
>gb|BT005730.1| Arabidopsis thaliana clone RAFL15-16-B15 (R20676) Length = 1794 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 392 tactacgatggacggtactggacaatgtggaagct 426
>dbj|AB005248.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXI10 Length = 83646 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Minus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 57682 tactacgatggacggtactggacaatgtggaagct 57648 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Minus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 50833 tactacgatggacggtactggacaatgtggaagct 50799 Score = 40.1 bits (20), Expect = 5.3 Identities = 31/35 (88%) Strand = Plus / Minus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| || ||||||||||||||||||| Sbjct: 54535 tactatgatggacgatactggacaatgtggaagct 54501
>emb|X07367.1|BNRBCSSU B.napus mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit Length = 726 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 |||||||||||||| ||||||||||||||||||| Sbjct: 377 tactacgatggccgttactggacaatgtggaagct 411
>emb|X55937.1|BNRBCSF1 Brassica napus rbcSF1 gene for ribulose-1,5-biphosphate carboxylase/oxygenase small subunit Length = 2006 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 |||||||||||||| ||||||||||||||||||| Sbjct: 1334 tactacgatggccgttactggacaatgtggaagct 1368
>gb|AF101233.1|AF101233 Manihot esculenta clone U291 ribulose 1,5-bisphosphate carboxylase small chain precursor, mRNA, complete cds; chloroplast gene for chloroplast product Length = 780 Score = 56.0 bits (28), Expect = 9e-05 Identities = 36/39 (92%) Strand = Plus / Plus Query: 327 gggtactacgatggccggnactggacaatgtggaagctg 365 |||||||||||||| || |||||||||||||||||||| Sbjct: 355 gggtactacgatggacgttactggacaatgtggaagctg 393
>gb|AF101232.1|AF101232 Manihot esculenta clone U216 ribulose 1,5-bisphosphate carboxylase small chain precursor, mRNA, complete cds; chloroplast gene for chloroplast product Length = 793 Score = 56.0 bits (28), Expect = 9e-05 Identities = 36/39 (92%) Strand = Plus / Plus Query: 327 gggtactacgatggccggnactggacaatgtggaagctg 365 |||||||||||||| || |||||||||||||||||||| Sbjct: 396 gggtactacgatggacgttactggacaatgtggaagctg 434
>gb|AF101230.1|AF101230 Manihot esculenta clone R312 ribulose 1,5-bisphosphate carboxylase small chain precursor, mRNA, complete cds; chloroplast gene for chloroplast product Length = 811 Score = 56.0 bits (28), Expect = 9e-05 Identities = 36/39 (92%) Strand = Plus / Plus Query: 327 gggtactacgatggccggnactggacaatgtggaagctg 365 |||||||||||||| || |||||||||||||||||||| Sbjct: 355 gggtactacgatggacgttactggacaatgtggaagctg 393
>emb|X14564.1|ATATSGS A.thaliana ats1B, ats2B and ats3B gene for ribulose-1,5-biphosphate carboxylase small subunit (rbcS) (EC 4.1.1.39) Length = 9647 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 9047 tactacgatggacggtactggacaatgtggaagct 9081 Score = 56.0 bits (28), Expect = 9e-05 Identities = 33/35 (94%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| ||| ||||||||||||||||||| Sbjct: 2200 tactacgatggacggtactggacaatgtggaagct 2234 Score = 40.1 bits (20), Expect = 5.3 Identities = 31/35 (88%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| || ||||||||||||||||||| Sbjct: 5348 tactatgatggacgatactggacaatgtggaagct 5382
>gb|AF039014.1|AF039014 Fritillaria agrestis clone TA8 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 592 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/52 (86%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||| ||||||||||| || |||||||||||||||||||| | ||| |||| Sbjct: 485 ctggttactacgatgggcgatactggacaatgtggaagctgcccatgttcgg 536 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccct 196 ||||||||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtgtggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039011.1|AF039011 Fritillaria agrestis clone TA22 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 591 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/52 (86%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||| ||||||||||| || |||||||||||||||||||| | ||| |||| Sbjct: 484 ctggttactacgatgggcgatactggacaatgtggaagctgcccatgttcgg 535 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccct 196 ||||||||||||||| ||| | ||||||||||||||||| Sbjct: 243 aggtgtggcccatcgtggggttgaagaagttcgagaccct 282
>gb|AF039008.1|AF039008 Fritillaria agrestis clone TA15 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 592 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/52 (86%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||| ||||||||||| || |||||||||||||||||||| | ||| |||| Sbjct: 485 ctggttactacgatgggcgatactggacaatgtggaagctgcccatgttcgg 536 Score = 48.1 bits (24), Expect = 0.022 Identities = 36/40 (90%) Strand = Plus / Plus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccct 196 ||||||||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtgtggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039004.1|AF039004 Fritillaria agrestis clone TA9 rbcS pseudogene, partial sequence Length = 594 Score = 54.0 bits (27), Expect = 4e-04 Identities = 32/34 (94%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtg 358 |||||||||||||||| ||| ||||||||||||| Sbjct: 488 ctgggtactacgatgggcggtactggacaatgtg 521 Score = 42.1 bits (21), Expect = 1.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 157 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 |||| |||||||||| ||| | ||||||||||||||||| || ||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccctctcctactt 292
>gb|AF031544.1|AF031544 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase small subunit type V (rbcS5) mRNA, complete cds Length = 728 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/52 (86%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||||||||||||| || ||||||| |||||||||||| | ||| |||| Sbjct: 390 ctgggtactacgatgggcgctactggacgatgtggaagctgcccatgttcgg 441 Score = 40.1 bits (20), Expect = 5.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 149 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 214 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 261
>gb|AF024573.1|AF024573 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type II (rbcS2) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 784 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/52 (86%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||||||||||||| || ||||||| |||||||||||| | ||| |||| Sbjct: 366 ctgggtactacgatgggcgctactggacgatgtggaagctgcccatgttcgg 417 Score = 40.1 bits (20), Expect = 5.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 149 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 190 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 237
>gb|BT012936.1| Lycopersicon esculentum clone 114099R, mRNA sequence Length = 1261 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 129 agcaacggtggaaggatcaggtgcatgcaggtgtggcc 166 |||||||||||||| |||| ||||||||||||||||| Sbjct: 734 agcaacggtggaagagtcagttgcatgcaggtgtggcc 771
>dbj|D00572.1|PYPRBCO Pyrus pyrifolia var. culta mRNA for RuBisCO small subunit, complete cds Length = 844 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/51 (86%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcggatgc 380 ||||| ||||| || |||||||||||||||||||| | ||| |||||||| Sbjct: 406 tactatgatggaaggtactggacaatgtggaagctgcccatgttcggatgc 456 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 aagaagttcgagaccctgtcttac 203 ||||||||||||||||| |||||| Sbjct: 253 aagaagttcgagaccctctcttac 276
>emb|X77813.1|PVRBCSG P.vittata rbcS gene Length = 1380 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 179 caagaagttcgagaccctgtcttacttgcc 208 ||||||||||||||| |||||||||||||| Sbjct: 779 caagaagttcgagacactgtcttacttgcc 808
>emb|X65494.1|MSCARB Malus (unidentified species of crab apple) mRNA for rubisco-1,5-bisphosphate carboxylase Length = 853 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/51 (86%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcggatgc 380 ||||| ||||| || |||||||||||||||||||| | ||| |||||||| Sbjct: 410 tactatgatggaaggtactggacaatgtggaagctgcccatgttcggatgc 460 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 aagaagttcgagaccctgtcttac 203 ||||||||||||||||| |||||| Sbjct: 257 aagaagttcgagaccctctcttac 280
>emb|X73136.1|PTRBC P.vittata mRNA for rubisco, small subunit Length = 618 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 179 caagaagttcgagaccctgtcttacttgcc 208 ||||||||||||||| |||||||||||||| Sbjct: 147 caagaagttcgagacactgtcttacttgcc 176
>gb|L24497.1|PYPRBCS Pyrus malus X domestica ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, complete cds Length = 813 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/51 (86%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcggatgc 380 ||||| ||||| || |||||||||||||||||||| | ||| |||||||| Sbjct: 374 tactatgatggaaggtactggacaatgtggaagctgcccatgttcggatgc 424 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 aagaagttcgagaccctgtcttac 203 ||||||||||||||||| |||||| Sbjct: 221 aagaagttcgagaccctctcttac 244
>gb|AY267351.1| Flaveria bidentis ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (RbcS2) mRNA, complete cds Length = 787 Score = 50.1 bits (25), Expect = 0.006 Identities = 32/35 (91%) Strand = Plus / Plus Query: 346 actggacaatgtggaagctgnctatgntcggatgc 380 ||||||||||||||||| || ||||| |||||||| Sbjct: 400 actggacaatgtggaagttgcctatgttcggatgc 434
>gb|AY273795.1| Citrus limon ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, partial cds; nuclear gene for chloroplast product Length = 357 Score = 50.1 bits (25), Expect = 0.006 Identities = 33/36 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctg 365 ||||||||||| || |||||||||||||||||||| Sbjct: 199 tactacgatggacgctactggacaatgtggaagctg 234
>gb|AF044400.1|AF044400 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P2A (rbcS-P2A) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 534 Score = 50.1 bits (25), Expect = 0.006 Identities = 32/35 (91%) Strand = Plus / Plus Query: 346 actggacaatgtggaagctgnctatgntcggatgc 380 ||||||||||||||||| || ||||| |||||||| Sbjct: 221 actggacaatgtggaagttgcctatgttcggatgc 255
>gb|AF044399.1|AF044399 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P1B (rbcS-P1B) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 629 Score = 50.1 bits (25), Expect = 0.006 Identities = 32/35 (91%) Strand = Plus / Plus Query: 346 actggacaatgtggaagctgnctatgntcggatgc 380 ||||||||||||||||| || ||||| |||||||| Sbjct: 221 actggacaatgtggaagttgcctatgttcggatgc 255
>gb|AF044398.1|AF044398 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P1A (rbcS-P1A) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 608 Score = 50.1 bits (25), Expect = 0.006 Identities = 32/35 (91%) Strand = Plus / Plus Query: 346 actggacaatgtggaagctgnctatgntcggatgc 380 ||||||||||||||||| || ||||| |||||||| Sbjct: 221 actggacaatgtggaagttgcctatgttcggatgc 255
>gb|AF044396.1|AF044396 Flaveria ramosissima ribulose-1,5-bisphosphate carboxylase small subunit R2 (rbcS-R2) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 574 Score = 50.1 bits (25), Expect = 0.006 Identities = 32/35 (91%) Strand = Plus / Plus Query: 346 actggacaatgtggaagctgnctatgntcggatgc 380 ||||||||||||||||| || ||||| |||||||| Sbjct: 221 actggacaatgtggaagttgcctatgttcggatgc 255
>gb|AF312228.1|AF312228 Citrus reticulata ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit precursor, gene, partial cds, nuclear gene for chloroplast product Length = 353 Score = 50.1 bits (25), Expect = 0.006 Identities = 33/36 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctg 365 ||||||||||| || |||||||||||||||||||| Sbjct: 184 tactacgatggacgctactggacaatgtggaagctg 219
>emb|X17234.1|LGRBCS4B Lemna gibba rbcS gene SSU40B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/50 (86%) Strand = Plus / Plus Query: 327 gggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 ||||||||||| || ||| ||||||| |||||||||||| | ||| |||| Sbjct: 428 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgg 477 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 128 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 187 ||||||||| || ||| | || ||||||||||||||||| |||||| | |||||||| Sbjct: 147 cagcaacggcggcagggttagctgcatgcaggtgtggccgccggagggcctgaagaagtt 206 Query: 188 cgagaccct 196 ||||||||| Sbjct: 207 cgagaccct 215
>emb|X17233.1|LGRBCS4A Lemna gibba rbcS gene SSU40A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/50 (86%) Strand = Plus / Plus Query: 327 gggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 ||||||||||| || ||| ||||||| |||||||||||| | ||| |||| Sbjct: 426 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgg 475 Score = 46.1 bits (23), Expect = 0.087 Identities = 41/47 (87%) Strand = Plus / Plus Query: 150 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 ||||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 169 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccct 215
>gb|AF162195.1|AF162195 Lactuca sativa ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit precursor, mRNA, complete cds Length = 956 Score = 50.1 bits (25), Expect = 0.006 Identities = 32/35 (91%) Strand = Plus / Plus Query: 346 actggacaatgtggaagctgnctatgntcggatgc 380 ||||||||||||||||| || ||||| |||||||| Sbjct: 413 actggacaatgtggaagttgcctatgttcggatgc 447 Score = 40.1 bits (20), Expect = 5.3 Identities = 36/42 (85%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatg 371 ||||| ||||| || ||||||||||||||||| || ||||| Sbjct: 885 tactatgatggacgctactggacaatgtggaagttgcctatg 926
>gb|U29939.1|FPU29939 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS7) mRNA, complete cds Length = 743 Score = 50.1 bits (25), Expect = 0.006 Identities = 32/35 (91%) Strand = Plus / Plus Query: 346 actggacaatgtggaagctgnctatgntcggatgc 380 ||||||||||||||||| || ||||| |||||||| Sbjct: 380 actggacaatgtggaagttgcctatgttcggatgc 414
>gb|U29938.1|FPU29938 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS6) mRNA, complete cds Length = 724 Score = 50.1 bits (25), Expect = 0.006 Identities = 32/35 (91%) Strand = Plus / Plus Query: 346 actggacaatgtggaagctgnctatgntcggatgc 380 ||||||||||||||||| || ||||| |||||||| Sbjct: 365 actggacaatgtggaagttgcctatgttcggatgc 399
>gb|U29937.1|FPU29937 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS5) mRNA, complete cds Length = 731 Score = 50.1 bits (25), Expect = 0.006 Identities = 32/35 (91%) Strand = Plus / Plus Query: 346 actggacaatgtggaagctgnctatgntcggatgc 380 ||||||||||||||||| || ||||| |||||||| Sbjct: 368 actggacaatgtggaagttgcctatgttcggatgc 402
>gb|U29936.1|FPU29936 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS4) mRNA, complete cds Length = 753 Score = 50.1 bits (25), Expect = 0.006 Identities = 32/35 (91%) Strand = Plus / Plus Query: 346 actggacaatgtggaagctgnctatgntcggatgc 380 ||||||||||||||||| || ||||| |||||||| Sbjct: 397 actggacaatgtggaagttgcctatgttcggatgc 431
>gb|U29935.1|FPU29935 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS3) mRNA, complete cds Length = 746 Score = 50.1 bits (25), Expect = 0.006 Identities = 32/35 (91%) Strand = Plus / Plus Query: 346 actggacaatgtggaagctgnctatgntcggatgc 380 ||||||||||||||||| || ||||| |||||||| Sbjct: 382 actggacaatgtggaagttgcctatgttcggatgc 416
>gb|U29934.1|FPU29934 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS2) mRNA, complete cds Length = 763 Score = 50.1 bits (25), Expect = 0.006 Identities = 32/35 (91%) Strand = Plus / Plus Query: 346 actggacaatgtggaagctgnctatgntcggatgc 380 ||||||||||||||||| || ||||| |||||||| Sbjct: 394 actggacaatgtggaagttgcctatgttcggatgc 428
>gb|M29642.1|PETRBCB Petunia ribulose 1,5-bisphosphate carboxylase small subunit mRNA (clone pSSU 51), partial cds Length = 212 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/50 (86%) Strand = Plus / Plus Query: 327 gggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 |||||||| |||||| || ||||||| |||||||||||| | ||| |||| Sbjct: 13 gggtactatgatggcaggtactggaccatgtggaagctgcccatgttcgg 62
>dbj|D14001.1|LAURBCS Lettuce mRNA for riburose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 758 Score = 50.1 bits (25), Expect = 0.006 Identities = 32/35 (91%) Strand = Plus / Plus Query: 346 actggacaatgtggaagctgnctatgntcggatgc 380 ||||||||||||||||| || ||||| |||||||| Sbjct: 405 actggacaatgtggaagttgcctatgttcggatgc 439
>ref|NM_202369.1| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT1G67090 transcript variant AT1G67090.2 mRNA, complete cds Length = 871 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 367 tactatgatggacggtactggacaatgtggaagct 401
>ref|NM_105379.2| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT1G67090 transcript variant AT1G67090.1 mRNA, complete cds Length = 878 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 374 tactatgatggacggtactggacaatgtggaagct 408
>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete sequence Length = 90387 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Minus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 78365 tactatgatggacggtactggacaatgtggaagct 78331
>gb|AY267674.1| Bigelowiella natans ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 1 mRNA, complete cds; nuclear gene for plastid product Length = 986 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/45 (86%) Strand = Plus / Plus Query: 333 tacgatggccggnactggacaatgtggaagctgnctatgntcgga 377 ||||||||||| ||||||| ||||||||||| ||||| ||||| Sbjct: 381 tacgatggccgctactggaccatgtggaagcttcctatgttcgga 425
>gb|BT000362.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090) mRNA, complete cds Length = 583 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 346 tactatgatggacggtactggacaatgtggaagct 380
>emb|X13611.1|ATRBCSA Arabidopsis thaliana ats1A gene for ribulose 1.5-biphoshate carboxylase small subunit (EC 4.1.1.39) Length = 2821 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 2319 tactatgatggacggtactggacaatgtggaagct 2353
>emb|X16435.1|SARUBISC Mustard Rubisco mRNA for the small subunit of ribulose bisphosphate carboxylase Length = 322 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| || ||||||||||||||||||| Sbjct: 49 tactacgatggtcgttactggacaatgtggaagct 83
>emb|AJ843975.1| Plantago major mRNA for Rubisco SSU (rbcs1a gene) Length = 761 Score = 48.1 bits (24), Expect = 0.022 Identities = 39/44 (88%) Strand = Plus / Plus Query: 241 tcgactacctgatccgctccaagtgggtgccttgcctcgagttc 284 |||||||||| |||||||||||||| | |||||||| |||||| Sbjct: 287 tcgactaccttctccgctccaagtggattccttgccttgagttc 330 Score = 42.1 bits (21), Expect = 1.4 Identities = 31/35 (88%) Strand = Plus / Plus Query: 346 actggacaatgtggaagctgnctatgntcggatgc 380 ||||||||||||||||||| | ||| |||||||| Sbjct: 395 actggacaatgtggaagctacccatgttcggatgc 429
>emb|X61097.1|BNRBCS B.napus rbcS gene for the small subunit of ribulose 1,5-bisphosphate carboxylase Length = 2714 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||||||||| || ||||||||||||||||||| Sbjct: 2234 tactacgatggacgttactggacaatgtggaagct 2268
>gb|AY097366.1| Arabidopsis thaliana At1g67090/F1O19.10 mRNA, complete cds Length = 543 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 346 tactatgatggacggtactggacaatgtggaagct 380
>gb|AY093388.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090) mRNA, complete cds Length = 583 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 346 tactatgatggacggtactggacaatgtggaagct 380
>gb|AY093380.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (F5A8.1) mRNA, complete cds Length = 583 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 346 tactatgatggacggtactggacaatgtggaagct 380
>gb|AY065101.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (F5A8.1) mRNA, complete cds Length = 617 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 368 tactatgatggacggtactggacaatgtggaagct 402
>gb|AY062711.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090; F5A8.1) mRNA, complete cds Length = 772 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 372 tactatgatggacggtactggacaatgtggaagct 406
>gb|AY062612.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (F5A8.1) mRNA, complete cds Length = 750 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 372 tactatgatggacggtactggacaatgtggaagct 406
>gb|AY059940.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090; F5A8.1) mRNA, complete cds Length = 721 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 375 tactatgatggacggtactggacaatgtggaagct 409
>gb|AY058831.1| Arabidopsis thaliana At1g67090/F1O19.10 mRNA, complete cds Length = 788 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 372 tactatgatggacggtactggacaatgtggaagct 406
>gb|AY054188.1| Arabidopsis thaliana At1g67090/F1O19.10 mRNA, complete cds Length = 711 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 374 tactatgatggacggtactggacaatgtggaagct 408
>gb|AY054581.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090; F5A8.1) mRNA, complete cds Length = 702 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 375 tactatgatggacggtactggacaatgtggaagct 409
>gb|AF410291.1|AF410291 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds Length = 752 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 373 tactatgatggacggtactggacaatgtggaagct 407
>gb|AY050459.1| Arabidopsis thaliana AT4g36870/C7A10_490 mRNA, complete cds Length = 3162 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 374 tactatgatggacggtactggacaatgtggaagct 408
>gb|AC004146.1|AC004146 Arabidopsis thaliana chromosome I BAC F5A8, complete sequence Length = 101933 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Minus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 2254 tactatgatggacggtactggacaatgtggaagct 2220
>gb|AF325004.2|AF325004 Arabidopsis thaliana At1g67090 (At1g67090/F1O19.10) mRNA, complete cds Length = 754 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 373 tactatgatggacggtactggacaatgtggaagct 407
>gb|AF372874.1|AF372874 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds Length = 632 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 197 tactatgatggacggtactggacaatgtggaagct 231
>emb|BX814212.1|CNS0ADS1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 735 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 352 tactatgatggacggtactggacaatgtggaagct 386
>emb|BX818334.1|CNS0ACND Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL73ZC07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 735 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 352 tactatgatggacggtactggacaatgtggaagct 386
>emb|BX818366.1|CNS0ACKZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL75ZD08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 697 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 314 tactatgatggacggtactggacaatgtggaagct 348
>emb|BX817617.1|CNS0ACFY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL32ZH02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 730 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 347 tactatgatggacggtactggacaatgtggaagct 381
>emb|BX832995.1|CNS0A22F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL28ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 550 Score = 48.1 bits (24), Expect = 0.022 Identities = 29/31 (93%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtgga 360 ||||||||||| ||| ||||||||||||||| Sbjct: 203 tactacgatggacggtactggacaatgtgga 233
>gb|AF325011.1|AF325011 Arabidopsis thaliana 000C10C11 mRNA, complete cds Length = 825 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 373 tactatgatggacggtactggacaatgtggaagct 407
>gb|AF303941.1|AF303941 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS3 mRNA, complete cds Length = 772 Score = 48.1 bits (24), Expect = 0.022 Identities = 37/42 (88%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatg 371 ||||||||||| || ||||||| |||||||||||| ||||| Sbjct: 380 tactacgatggacgctactggaccatgtggaagctgcctatg 421
>gb|AF303940.1|AF303940 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS2 mRNA, complete cds Length = 830 Score = 48.1 bits (24), Expect = 0.022 Identities = 37/42 (88%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatg 371 ||||||||||| || ||||||| |||||||||||| ||||| Sbjct: 380 tactacgatggacgctactggaccatgtggaagctgcctatg 421
>gb|AF303939.1|AF303939 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS1 mRNA, complete cds Length = 750 Score = 48.1 bits (24), Expect = 0.022 Identities = 37/42 (88%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatg 371 ||||||||||| || ||||||| |||||||||||| ||||| Sbjct: 380 tactacgatggacgctactggaccatgtggaagctgcctatg 421
>gb|U39567.1|GMU39567 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 765 Score = 48.1 bits (24), Expect = 0.022 Identities = 37/42 (88%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatg 371 ||||||||||| || ||||||| |||||||||||| ||||| Sbjct: 377 tactacgatggacgctactggaccatgtggaagctgcctatg 418
>emb|X00137.1|LGRUBP Lemna gibba ribulose 1.5-bisphospate carboxylase small subunit (cDNA clone pLg ssu1) Length = 776 Score = 48.1 bits (24), Expect = 0.022 Identities = 48/56 (85%) Strand = Plus / Plus Query: 150 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 205 ||||||||||||||||| |||||| | ||||||||||||||||| || ||||| Sbjct: 172 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccctctcctactt 227 Score = 44.1 bits (22), Expect = 0.34 Identities = 89/113 (78%) Strand = Plus / Plus Query: 264 tgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatnt 323 ||||| || ||| |||||||| ||||| |||||| | | ||||||| ||||||| | Sbjct: 286 tgggttccctgcatcgagttctccaaggaggggttcgtgtaccgtgagaacaacgcgtcg 345 Query: 324 nctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 | ||||||||||| || || ||||||| |||||||||||| | ||| |||| Sbjct: 346 cccgggtactacgacgggaggtactggacgatgtggaagctgcccatgttcgg 398
>emb|X03821.1|PERBCS11 Petunia x hybrida rbcS gene (ssu11A) for ribulose 1,5-bisphosphate carboxylase small subunit Length = 1314 Score = 48.1 bits (24), Expect = 0.022 Identities = 42/49 (85%) Strand = Plus / Plus Query: 328 ggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 ||||||| |||||| || ||||||| |||||||||||| | ||| |||| Sbjct: 995 ggtactatgatggcaggtactggaccatgtggaagctgcccatgttcgg 1043
>gb|AF101231.1|AF101231 Manihot esculenta clone R33 ribulose 1,5-bisphosphate carboxylase small chain precursor, mRNA, complete cds; chloroplast gene for chloroplast product Length = 824 Score = 48.1 bits (24), Expect = 0.022 Identities = 35/39 (89%) Strand = Plus / Plus Query: 327 gggtactacgatggccggnactggacaatgtggaagctg 365 |||||||||||||| || ||||||| |||||||||||| Sbjct: 368 gggtactacgatggtcgctactggaccatgtggaagctg 406
>gb|AF101228.1|AF101228 Manihot esculenta clone R214 ribulose 1,5-bisphosphate carboxylase small chain precursor, mRNA, complete cds; chloroplast gene for chloroplast product Length = 780 Score = 48.1 bits (24), Expect = 0.022 Identities = 35/39 (89%) Strand = Plus / Plus Query: 327 gggtactacgatggccggnactggacaatgtggaagctg 365 |||||||||||||| || ||||||| |||||||||||| Sbjct: 350 gggtactacgatggtcgctactggaccatgtggaagctg 388
>gb|BT002076.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090) mRNA, complete cds Length = 583 Score = 48.1 bits (24), Expect = 0.022 Identities = 32/35 (91%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagct 364 ||||| ||||| ||| ||||||||||||||||||| Sbjct: 346 tactatgatggacggtactggacaatgtggaagct 380
>gb|M96583.1|MNHRUBISCO Manihot esculenta ribulose 1,5-bisphosphate carboxylase mRNA, complete cds Length = 1093 Score = 48.1 bits (24), Expect = 0.022 Identities = 35/39 (89%) Strand = Plus / Plus Query: 327 gggtactacgatggccggnactggacaatgtggaagctg 365 |||||||||||||| || ||||||| |||||||||||| Sbjct: 621 gggtactacgatggtcgctactggaccatgtggaagctg 659
>gb|M16889.1|SOYRUBPA Soybean ribulose 1,5-bisphosphate carboxylase small subunit (SRS4) gene, complete cds Length = 2185 Score = 48.1 bits (24), Expect = 0.022 Identities = 37/42 (88%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatg 371 ||||||||||| || ||||||| |||||||||||| ||||| Sbjct: 1548 tactacgatggacgctactggaccatgtggaagctgcctatg 1589
>gb|M95930.1|MNHRBCSA Manihot esculenta (clone rubssr37) ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit EC 4.1.1.39 (rbc S) mRNA sequence Length = 1162 Score = 48.1 bits (24), Expect = 0.022 Identities = 35/39 (89%) Strand = Plus / Plus Query: 327 gggtactacgatggccggnactggacaatgtggaagctg 365 |||||||||||||| || ||||||| |||||||||||| Sbjct: 621 gggtactacgatggtcgctactggaccatgtggaagctg 659
>gb|AY487801.1| Capsicum annuum Cristal-Glass1 protein mRNA, complete cds Length = 769 Score = 46.1 bits (23), Expect = 0.087 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaag 362 |||| |||||||||||| || ||||||| ||||||||| Sbjct: 385 ctggatactacgatggcaggtactggaccatgtggaag 422
>emb|X17232.1|LGRBCS26 Lemna gibba rbcS gene SSU26 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 936 Score = 46.1 bits (23), Expect = 0.087 Identities = 41/47 (87%) Strand = Plus / Plus Query: 150 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 ||||||||||||||||| |||||| |||||||||| |||||||| Sbjct: 169 tgcatgcaggtgtggccgccggagggcctcaagaagtttgagaccct 215
>emb|X17235.1|LGRBCS1 Lemna gibba rbcS mRNA SSU1 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 764 Score = 46.1 bits (23), Expect = 0.087 Identities = 41/47 (87%) Strand = Plus / Plus Query: 150 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 196 ||||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 157 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccct 203 Score = 44.1 bits (22), Expect = 0.34 Identities = 89/113 (78%) Strand = Plus / Plus Query: 264 tgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatnt 323 ||||| || ||| |||||||| ||||| |||||| | | ||||||| ||||||| | Sbjct: 271 tgggttccctgcatcgagttctccaaggaggggttcgtgtaccgtgagaacaacgcgtcg 330 Query: 324 nctgggtactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 | ||||||||||| || || ||||||| |||||||||||| | ||| |||| Sbjct: 331 cccgggtactacgacgggaggtactggacgatgtggaagctgcccatgttcgg 383
>gb|AF065615.1|AF065615 Capsicum annuum ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds Length = 801 Score = 46.1 bits (23), Expect = 0.087 Identities = 34/38 (89%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaag 362 |||| |||||||||||| || ||||||| ||||||||| Sbjct: 406 ctggatactacgatggcaggtactggaccatgtggaag 443
>gb|AY163904.1| Chrysanthemum x morifolium ribulose-1,5-bisphosphate carboxylase small subunit gene, complete cds; nuclear gene for chloroplast product Length = 2662 Score = 44.1 bits (22), Expect = 0.34 Identities = 30/33 (90%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaag 362 |||||||||||| | ||||||||||||||||| Sbjct: 1527 tactacgatggcagatactggacaatgtggaag 1559
>emb|X01722.1|NSRUB1 Nicotiana silvestris mRNA for the small subunit of ribulose bisphosphate carboxylase Length = 796 Score = 44.1 bits (22), Expect = 0.34 Identities = 43/51 (84%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcggatgc 380 ||||| |||||| | ||||||| ||||||||||| ||||| |||||||| Sbjct: 412 tactatgatggcagatactggaccatgtggaagctacctatgttcggatgc 462
>dbj|AB004883.1| Marchantia paleacea var. diptera mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 931 Score = 44.1 bits (22), Expect = 0.34 Identities = 30/33 (90%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaag 362 |||||||||||||| ||||||| ||||||||| Sbjct: 407 tactacgatggccgatactggaccatgtggaag 439
>emb|AJ538400.1|NTA538400 Nicotiana tabacum cDNA-AFLP-fragment BC1-M23-013 Length = 263 Score = 44.1 bits (22), Expect = 0.34 Identities = 43/51 (84%) Strand = Plus / Minus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcggatgc 380 ||||| |||||| | ||||||| ||||||||||| ||||| |||||||| Sbjct: 103 tactatgatggcagatactggaccatgtggaagctacctatgttcggatgc 53
>gb|AF162210.1|AF162210 Lactuca sativa ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; nuclear gene for chloroplast product Length = 835 Score = 44.1 bits (22), Expect = 0.34 Identities = 40/47 (85%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 ||||| ||||| || ||||||||||||||||| || ||||| |||| Sbjct: 422 tactatgatggacgctactggacaatgtggaagttgcctatgttcgg 468
>gb|J01308.1|TOBRBPC Nicotiana sylvestris ribulose-1,5-bisphosphate carboxylase small subunit mRNA Length = 453 Score = 44.1 bits (22), Expect = 0.34 Identities = 43/51 (84%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcggatgc 380 ||||| |||||| | ||||||| ||||||||||| ||||| |||||||| Sbjct: 70 tactatgatggcagatactggaccatgtggaagctacctatgttcggatgc 120
>gb|M38318.1|CIPRBCS4 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-4) mRNA, complete cds Length = 747 Score = 44.1 bits (22), Expect = 0.34 Identities = 30/33 (90%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaag 362 ||||||||||| || ||||||||||||||||| Sbjct: 373 tactacgatggacgttactggacaatgtggaag 405
>gb|M31640.1|CIPRBC Ice plant ribulose-1-5-bisphosphate carboxylase (rbc5) gene, complete cds Length = 776 Score = 44.1 bits (22), Expect = 0.34 Identities = 30/33 (90%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaag 362 ||||||||||| || ||||||||||||||||| Sbjct: 388 tactacgatggacgttactggacaatgtggaag 420 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 131 caacggtggaaggatcaggtgcatgcaggtgtggcc 166 |||||||||||| || |||||||||||||||||| Sbjct: 186 caacggtggaagagtccagtgcatgcaggtgtggcc 221
>gb|L10213.1|CIP6RSS Mesembryanthemum crystallinum (clone: rbcs-6) rubisco small subunit gene, complete cds Length = 3024 Score = 44.1 bits (22), Expect = 0.34 Identities = 30/33 (90%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaag 362 ||||||||||| || ||||||||||||||||| Sbjct: 2469 tactacgatggacgttactggacaatgtggaag 2501
>gb|L10215.1|CIP345RSS Mesembryanthemum crystallinum (clones: rbcs-3 and -4) rubisco small subunit genes, complete cds, (clone: rbcs-5) rubisco small submnit gene, partial cds Length = 8682 Score = 44.1 bits (22), Expect = 0.34 Identities = 30/33 (90%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaag 362 ||||||||||| || ||||||||||||||||| Sbjct: 7511 tactacgatggacgttactggacaatgtggaag 7543 Score = 44.1 bits (22), Expect = 0.34 Identities = 30/33 (90%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaag 362 ||||||||||| || ||||||||||||||||| Sbjct: 3529 tactacgatggacgttactggacaatgtggaag 3561 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 aagaagttcgagaccctgtcttac 203 |||||||||||||| ||||||||| Sbjct: 895 aagaagttcgagactctgtcttac 918
>gb|L10212.1|CIP1RSS Mesembryanthemum crystallinum (clone: rbcs-1) rubisco small subunit gene, complete cds Length = 3552 Score = 44.1 bits (22), Expect = 0.34 Identities = 30/33 (90%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaag 362 ||||||||||| || ||||||||||||||||| Sbjct: 2349 tactacgatggacgttactggacaatgtggaag 2381
>dbj|AB026685.1| Physcomitrella patens mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 818 Score = 44.1 bits (22), Expect = 0.34 Identities = 40/47 (85%) Strand = Plus / Plus Query: 330 tactacgatggccggnactggacaatgtggaagctgnctatgntcgg 376 ||||||||||| || ||||||| |||||||||||| | ||| |||| Sbjct: 462 tactacgatgggcgctactggaccatgtggaagctgcccatgttcgg 508
>gb|AY843526.1| Ammopiptanthus mongolicus ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 824 Score = 42.1 bits (21), Expect = 1.4 Identities = 40/47 (85%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatg 371 |||| ||||| ||||| || ||||||| |||||||||||| ||||| Sbjct: 373 ctggatactatgatggacgctactggaccatgtggaagctgcctatg 419 Score = 40.1 bits (20), Expect = 5.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 180 aagaagttcgagaccctgtcttacttgccaccactc 215 |||||||||||||| || || ||| ||||||||||| Sbjct: 225 aagaagttcgagactctttcctacctgccaccactc 260
>gb|AY267350.1| Flaveria bidentis ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (RbcS1) mRNA, complete cds Length = 735 Score = 42.1 bits (21), Expect = 1.4 Identities = 31/35 (88%) Strand = Plus / Plus Query: 346 actggacaatgtggaagctgnctatgntcggatgc 380 ||||||||||||||||| || ||||| | |||||| Sbjct: 376 actggacaatgtggaagttgcctatgtttggatgc 410
>gb|BC038257.1| Mus musculus cDNA clone MGC:47002 IMAGE:5148367, complete cds Length = 763 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 180 aagaagttcgagaccctgtcttacttgccaccactca 216 ||||||||||||||||| |||||| | ||||| |||| Sbjct: 251 aagaagttcgagaccctctcttaccttccacctctca 287
>emb|X02353.1|NTRUBSS Tobacco gene for ribulose 1,5-bisphosphate carboxylase small subunit Length = 2362 Score = 42.1 bits (21), Expect = 1.4 Identities = 31/35 (88%) Strand = Plus / Plus Query: 346 actggacaatgtggaagctgnctatgntcggatgc 380 ||||||| ||||||||||| ||||| |||||||| Sbjct: 1809 actggaccatgtggaagctacctatgttcggatgc 1843
>emb|AJ439989.1|OSA439989 Oryza sativa partial mRNA for ribulose 1,5-bisphosphate carboxylase, small subunit (rbpc-L gene) Length = 432 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/46 (84%) Strand = Plus / Plus Query: 246 tacctgatccgctccaagtgggtgccttgcctcgagttcagcaagg 291 |||| | |||| |||||| ||| ||| ||||||||||||| ||||| Sbjct: 214 taccngntccgttccaagggggngccctgcctcgagttcaacaagg 259
>dbj|AB236868.1| Panax ginseng mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 790 Score = 42.1 bits (21), Expect = 1.4 Identities = 31/35 (88%) Strand = Plus / Plus Query: 346 actggacaatgtggaagctgnctatgntcggatgc 380 |||||||||||||||||||| | ||| | |||||| Sbjct: 411 actggacaatgtggaagctgcccatgtttggatgc 445 Score = 42.1 bits (21), Expect = 1.4 Identities = 33/37 (89%) Strand = Plus / Plus Query: 180 aagaagttcgagaccctgtcttacttgccaccactca 216 |||||||||||||| ||||||||| | |||| ||||| Sbjct: 242 aagaagttcgagactctgtcttacctcccacaactca 278
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/54 (83%) Strand = Plus / Plus Query: 327 gggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgc 380 ||||||||||| || || ||||||| ||||||||||| | ||| |||||||| Sbjct: 2875714 gggtactacgacgggaggtactggacgctgtggaagctgccgatgttcggatgc 2875767
>gb|AF139469.2|AF139469 Vigna radiata ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, complete cds; nuclear gene for chloroplast product Length = 782 Score = 42.1 bits (21), Expect = 1.4 Identities = 40/47 (85%) Strand = Plus / Plus Query: 325 ctgggtactacgatggccggnactggacaatgtggaagctgnctatg 371 |||| ||||| ||||| || ||||||| |||||||||||| ||||| Sbjct: 396 ctggatactatgatggaaggtactggaccatgtggaagctgcctatg 442
>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0050G13 Length = 150685 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/54 (83%) Strand = Plus / Plus Query: 327 gggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgc 380 ||||||||||| || || ||||||| ||||||||||| | ||| |||||||| Sbjct: 143942 gggtactacgacgggaggtactggacgctgtggaagctgccgatgttcggatgc 143995
>dbj|AP007224.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0463E12 Length = 161081 Score = 42.1 bits (21), Expect = 1.4 Identities = 45/54 (83%) Strand = Plus / Plus Query: 327 gggtactacgatggccggnactggacaatgtggaagctgnctatgntcggatgc 380 ||||||||||| || || ||||||| ||||||||||| | ||| |||||||| Sbjct: 1353 gggtactacgacgggaggtactggacgctgtggaagctgccgatgttcggatgc 1406
>emb|X13711.1|NPRBCS8B Nicotiana plumbaginifolia rbcS-8B gene for ribulose bisphosphate carboxylase small subunit Length = 2293 Score = 42.1 bits (21), Expect = 1.4 Identities = 31/35 (88%) Strand = Plus / Plus Query: 346 actggacaatgtggaagctgnctatgntcggatgc 380 ||||||| ||||||||||| ||||| |||||||| Sbjct: 1817 actggaccatgtggaagctacctatgttcggatgc 1851
>emb|X54465.1|LLRBC7CM L.laricina mRNA for ribulose bisphosphate carboxylase (LLRBC7C) Length = 263 Score = 42.1 bits (21), Expect = 1.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 354 atgtggaagctgnctatgntcggatgc 380 |||||||||||| ||||| |||||||| Sbjct: 20 atgtggaagctgcctatgttcggatgc 46
>emb|X54464.1|LLRBC5CM L.laricina mRNA for ribulose bisphosphate carboxylase (LLRBC5C) Length = 678 Score = 42.1 bits (21), Expect = 1.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 354 atgtggaagctgnctatgntcggatgc 380 |||||||||||| ||||| |||||||| Sbjct: 351 atgtggaagctgcctatgttcggatgc 377
>emb|X54462.1|LLRBC3CM L.laricina mRNA for ribulose bisphosphate carboxylase (LLRBC3C) Length = 663 Score = 42.1 bits (21), Expect = 1.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 354 atgtggaagctgnctatgntcggatgc 380 |||||||||||| ||||| |||||||| Sbjct: 424 atgtggaagctgcctatgttcggatgc 450
>emb|X54460.1|LLRBC1C L.laricina mRNA for ribulose bisphosphate carboxylase (LLRBC1C) Length = 117 Score = 42.1 bits (21), Expect = 1.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 354 atgtggaagctgnctatgntcggatgc 380 |||||||||||| ||||| |||||||| Sbjct: 22 atgtggaagctgcctatgttcggatgc 48 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,347,469 Number of Sequences: 3902068 Number of extensions: 2347469 Number of successful extensions: 46443 Number of sequences better than 10.0: 295 Number of HSP's better than 10.0 without gapping: 294 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 45599 Number of HSP's gapped (non-prelim): 727 length of query: 400 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 378 effective length of database: 17,147,199,772 effective search space: 6481641513816 effective search space used: 6481641513816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
