ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd20o05 |
|---|---|
| Clone Library Name | barley_pub |
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 254 bits (649), Expect = 6e-68 Identities = 121/133 (90%), Positives = 127/133 (95%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPP 210 LSS +FAGKAVKNLPSS++ G+ARV MRKTAAKAKQV+S SPWYGSDRVLYLGPLSGEPP Sbjct: 8 LSSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPP 67 Query: 211 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 390 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG Sbjct: 68 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 127 Query: 391 EAVWFKAGSQILA 429 EA WFKAGSQI + Sbjct: 128 EAGWFKAGSQIFS 140
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 244 bits (624), Expect = 5e-65 Identities = 124/134 (92%), Positives = 126/134 (94%), Gaps = 1/134 (0%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVA-SGSPWYGSDRVLYLGPLSGEP 207 LSS AFAGKAV N+PSSS FGEARVTMRKTAAKAK A SGSPWYG DRVLYLGPLSGEP Sbjct: 8 LSSTAFAGKAV-NVPSSS-FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEP 65 Query: 208 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 387 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 125 Query: 388 GEAVWFKAGSQILA 429 GEAVWFKAGSQI + Sbjct: 126 GEAVWFKAGSQIFS 139
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 239 bits (611), Expect = 2e-63 Identities = 122/134 (91%), Positives = 125/134 (93%), Gaps = 1/134 (0%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVAS-GSPWYGSDRVLYLGPLSGEP 207 LSS AFAGKAV N+PSS +FGEARVTMRKTAAKAK AS GSPWYG DRVLYLGPLSGEP Sbjct: 8 LSSTAFAGKAV-NVPSS-LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEP 65 Query: 208 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 387 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKF Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 125 Query: 388 GEAVWFKAGSQILA 429 GEAVWFKAGSQI + Sbjct: 126 GEAVWFKAGSQIFS 139
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 236 bits (601), Expect = 2e-62 Identities = 115/134 (85%), Positives = 121/134 (90%), Gaps = 1/134 (0%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEP 207 LSS +FAGKAVK PSSS + G +VTMRKTA+KAK V+SGSPWYG DRV YLGP SGE Sbjct: 8 LSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGES 67 Query: 208 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 387 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127 Query: 388 GEAVWFKAGSQILA 429 GEAVWFKAGSQI + Sbjct: 128 GEAVWFKAGSQIFS 141
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 235 bits (599), Expect = 4e-62 Identities = 115/134 (85%), Positives = 118/134 (88%), Gaps = 1/134 (0%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEP 207 LSS FAGKAVK PSSS + G RVTMRKTA KAK +SGSPWYG DRV YLGP SGE Sbjct: 8 LSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGES 67 Query: 208 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 387 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127 Query: 388 GEAVWFKAGSQILA 429 GEAVWFKAGSQI + Sbjct: 128 GEAVWFKAGSQIFS 141
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 234 bits (596), Expect = 9e-62 Identities = 114/138 (82%), Positives = 120/138 (86%), Gaps = 1/138 (0%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPL 195 A LSS +FAGKAVK PSSS + G +VTMRKT KAK ++SGSPWYG DRV YLGP Sbjct: 4 ATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPF 63 Query: 196 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 375 SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN Sbjct: 64 SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 123 Query: 376 GVKFGEAVWFKAGSQILA 429 GVKFGEAVWFKAGSQI + Sbjct: 124 GVKFGEAVWFKAGSQIFS 141
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 233 bits (594), Expect = 1e-61 Identities = 114/137 (83%), Positives = 120/137 (87%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLS 198 A LSS A AGKA ++ VFGE R+TMRK+AAK K ASGSPWYG+DRVLYLGPLS Sbjct: 4 ATMALSSPALAGKA-----AAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLS 58 Query: 199 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 378 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNG Sbjct: 59 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNG 118 Query: 379 VKFGEAVWFKAGSQILA 429 VKFGEAVWFKAGSQI + Sbjct: 119 VKFGEAVWFKAGSQIFS 135
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 233 bits (593), Expect = 2e-61 Identities = 114/132 (86%), Positives = 118/132 (89%), Gaps = 1/132 (0%) Frame = +1 Query: 37 SQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPS 213 S FAGKAVK PSSS V G +VTMRKTA+KAK V+SGSPWYG DRV YLGP SGE PS Sbjct: 9 SSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPS 68 Query: 214 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 393 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE Sbjct: 69 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 128 Query: 394 AVWFKAGSQILA 429 AVWFKAGSQI + Sbjct: 129 AVWFKAGSQIFS 140
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 231 bits (590), Expect = 4e-61 Identities = 114/132 (86%), Positives = 117/132 (88%), Gaps = 1/132 (0%) Frame = +1 Query: 37 SQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPS 213 S FAGKAVK PSSS V G +VTMRKTA KAK V+SGSPWYG DRV YLGP SGE PS Sbjct: 9 SSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPS 68 Query: 214 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 393 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE Sbjct: 69 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 128 Query: 394 AVWFKAGSQILA 429 AVWFKAGSQI + Sbjct: 129 AVWFKAGSQIFS 140 Score = 30.4 bits (67), Expect = 1.9 Identities = 18/62 (29%), Positives = 28/62 (45%) Frame = +1 Query: 193 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 372 ++GEP + +D GL+ DPE FA+ + E+ + R AM G L+ Sbjct: 177 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTG 236 Query: 373 NG 378 G Sbjct: 237 KG 238
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 231 bits (588), Expect = 7e-61 Identities = 112/135 (82%), Positives = 120/135 (88%), Gaps = 1/135 (0%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEP 207 LSS +FAGKAVK PSSS + G +VTMRKTA+KAK V+S SPWYG +RV YLGP SGE Sbjct: 8 LSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGES 67 Query: 208 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 387 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127 Query: 388 GEAVWFKAGSQILAR 432 GEAVWFK GSQI ++ Sbjct: 128 GEAVWFKGGSQIFSQ 142 Score = 29.6 bits (65), Expect = 3.2 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = +1 Query: 193 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 372 ++GEP + +D GL+ DPE FA+ + E+ + R AM G ++ Sbjct: 178 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTG 237 Query: 373 NG 378 G Sbjct: 238 KG 239
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 230 bits (586), Expect = 1e-60 Identities = 113/138 (81%), Positives = 118/138 (85%), Gaps = 1/138 (0%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPL 195 A LSS +FAGKAVK PSSS + G + TMRKT KAK V+SGSPWYG DRV YLGP Sbjct: 4 ATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPF 63 Query: 196 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 375 SGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN Sbjct: 64 SGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 123 Query: 376 GVKFGEAVWFKAGSQILA 429 GVKFGEAVWFKAGSQI + Sbjct: 124 GVKFGEAVWFKAGSQIFS 141
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 229 bits (584), Expect = 2e-60 Identities = 112/138 (81%), Positives = 119/138 (86%), Gaps = 1/138 (0%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPL 195 A +SS +FAGKAV N+PSSS + G + TMRKT KAK V+SGSPWYG DRV YLGP Sbjct: 4 ATMAISSSSFAGKAV-NVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPF 62 Query: 196 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 375 SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARN Sbjct: 63 SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARN 122 Query: 376 GVKFGEAVWFKAGSQILA 429 GVKFGEAVWFKAGSQI + Sbjct: 123 GVKFGEAVWFKAGSQIFS 140
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 229 bits (584), Expect = 2e-60 Identities = 112/138 (81%), Positives = 116/138 (84%), Gaps = 1/138 (0%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPL 195 A LSS FAGK VK PSSS + G + TMRKTA KAK V+SGSPWYG DRV YLGP Sbjct: 4 ATMALSSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPF 63 Query: 196 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 375 SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARN Sbjct: 64 SGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARN 123 Query: 376 GVKFGEAVWFKAGSQILA 429 GVKFGEAVW KAGSQI + Sbjct: 124 GVKFGEAVWLKAGSQIFS 141
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 228 bits (582), Expect = 4e-60 Identities = 111/134 (82%), Positives = 117/134 (87%), Gaps = 1/134 (0%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEP 207 LSS + AGKAVK P++S + GE R+TMRKTA K K V S SPWYG DRV YLGP SGE Sbjct: 8 LSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGES 67 Query: 208 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 387 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127 Query: 388 GEAVWFKAGSQILA 429 GEAVWFKAGSQI + Sbjct: 128 GEAVWFKAGSQIFS 141
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 228 bits (581), Expect = 5e-60 Identities = 111/134 (82%), Positives = 116/134 (86%), Gaps = 1/134 (0%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEP 207 LSS +FAG AVK PSSS + G + MRKT KAK V+SGSPWYG DRV YLGP SGE Sbjct: 8 LSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEA 67 Query: 208 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 387 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 127 Query: 388 GEAVWFKAGSQILA 429 GEAVWFKAGSQI + Sbjct: 128 GEAVWFKAGSQIFS 141
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 226 bits (577), Expect = 1e-59 Identities = 114/138 (82%), Positives = 119/138 (86%), Gaps = 1/138 (0%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVAS-GSPWYGSDRVLYLGPL 195 A LSS A A SS++FGEAR+TMRKTAAK K AS GSPWYG+DRVLYLGPL Sbjct: 4 ATMALSSPVMARAAPST--SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPL 61 Query: 196 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 375 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARN Sbjct: 62 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN 121 Query: 376 GVKFGEAVWFKAGSQILA 429 GVKFGEAVWFKAGSQI + Sbjct: 122 GVKFGEAVWFKAGSQIFS 139
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 226 bits (577), Expect = 1e-59 Identities = 113/134 (84%), Positives = 116/134 (86%), Gaps = 1/134 (0%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEP 207 LSS AFAGKAVK P +S VFG RVTMRKT SGSPWYGSDRV YLGP SGEP Sbjct: 8 LSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGP--SGSPWYGSDRVKYLGPFSGEP 65 Query: 208 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 387 PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARNGVKF Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKF 125 Query: 388 GEAVWFKAGSQILA 429 GEAVWFKAGSQI + Sbjct: 126 GEAVWFKAGSQIFS 139
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 224 bits (571), Expect = 7e-59 Identities = 113/134 (84%), Positives = 117/134 (87%), Gaps = 1/134 (0%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEP 207 LSS AFAGKAVK P++S V G RVTMRKT AK K SGSPWYGSDRV YLGP SGE Sbjct: 8 LSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGPFSGES 66 Query: 208 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 387 PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKF Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKF 126 Query: 388 GEAVWFKAGSQILA 429 GEAVWFKAGSQI + Sbjct: 127 GEAVWFKAGSQIFS 140
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 223 bits (567), Expect = 2e-58 Identities = 110/136 (80%), Positives = 116/136 (85%), Gaps = 1/136 (0%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPL 195 A LSS +FAGKAV N+PSSS + +VTMRKT KAK V+SGSPWYG DRV YLGP Sbjct: 4 ATMALSSSSFAGKAV-NVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPF 62 Query: 196 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 375 SGE PSYLTGEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL ARN Sbjct: 63 SGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARN 122 Query: 376 GVKFGEAVWFKAGSQI 423 GVKFGEAVWFKAGSQI Sbjct: 123 GVKFGEAVWFKAGSQI 138
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 222 bits (566), Expect = 3e-58 Identities = 112/134 (83%), Positives = 116/134 (86%), Gaps = 1/134 (0%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEP 207 LSS AFAGKAV P++S V G RVTMRKT AK K SGSPWYGSDRV YLGP SGE Sbjct: 8 LSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGPFSGES 66 Query: 208 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 387 PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARNGVKF Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKF 126 Query: 388 GEAVWFKAGSQILA 429 GEAVWFKAGSQI + Sbjct: 127 GEAVWFKAGSQIFS 140
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 222 bits (566), Expect = 3e-58 Identities = 114/138 (82%), Positives = 117/138 (84%), Gaps = 1/138 (0%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPL 195 A LSS FAGKAVKNL SSS V G+ARV+MRKTAA K GSPWYG DRV YLGP Sbjct: 4 ATMALSSSTFAGKAVKNLSSSSEVQGDARVSMRKTAATKKV---GSPWYGPDRVKYLGPF 60 Query: 196 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 375 SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARN Sbjct: 61 SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARN 120 Query: 376 GVKFGEAVWFKAGSQILA 429 GVKFGEAVWFK GSQI + Sbjct: 121 GVKFGEAVWFKKGSQIFS 138
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 222 bits (565), Expect = 3e-58 Identities = 111/138 (80%), Positives = 117/138 (84%), Gaps = 1/138 (0%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSS-SVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPL 195 A LSS +FAG+AVK PS+ + G RV+MRKT AK VAS SPWYG DRV YLGP Sbjct: 4 ATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKP--VASSSPWYGPDRVKYLGPF 61 Query: 196 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 375 SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN Sbjct: 62 SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 121 Query: 376 GVKFGEAVWFKAGSQILA 429 GVKFGEAVWFKAGSQI + Sbjct: 122 GVKFGEAVWFKAGSQIFS 139
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 222 bits (565), Expect = 3e-58 Identities = 107/134 (79%), Positives = 114/134 (85%), Gaps = 1/134 (0%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEP 207 LSS +FAGKAVK SSS + G +VTMRKT KAK +S SPWYG DRV YLGP SGE Sbjct: 8 LSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEA 67 Query: 208 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 387 PSYLTGEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARNG+KF Sbjct: 68 PSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKF 127 Query: 388 GEAVWFKAGSQILA 429 GEAVWFKAG+QI + Sbjct: 128 GEAVWFKAGAQIFS 141
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 220 bits (561), Expect = 1e-57 Identities = 110/138 (79%), Positives = 116/138 (84%), Gaps = 1/138 (0%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPL 195 A LSS +FAG+AVK PS+S + G R+TMRK A AK S SPWYG DRV YLGP Sbjct: 4 ATMALSSPSFAGQAVKLSPSASEISGNGRITMRK--AVAKSAPSSSPWYGPDRVKYLGPF 61 Query: 196 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 375 SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN Sbjct: 62 SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 121 Query: 376 GVKFGEAVWFKAGSQILA 429 GVKFGEAVWFKAGSQI + Sbjct: 122 GVKFGEAVWFKAGSQIFS 139
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 219 bits (558), Expect = 2e-57 Identities = 106/133 (79%), Positives = 111/133 (83%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPP 210 +SS A AG +K FGE R+TMRKT K K ASGSPWYG DRV YLGP SGEPP Sbjct: 8 ISSTAMAGTPIK----VGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPP 63 Query: 211 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 390 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFG Sbjct: 64 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG 123 Query: 391 EAVWFKAGSQILA 429 EAVWFKAGSQI + Sbjct: 124 EAVWFKAGSQIFS 136
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 218 bits (555), Expect = 5e-57 Identities = 104/137 (75%), Positives = 112/137 (81%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLS 198 A ++S+A GK + VFGE R+TMRKTAAK K SGSPWYG+DRVLYLGPLS Sbjct: 4 ATMAITSRALVGKPAAG--TRDVFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLS 61 Query: 199 GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 378 G PPSYLTGEFPGDYGWDT GLSADPETFAKNRELEVIHCRWA+ LGCVFPELLARNG Sbjct: 62 GSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNG 121 Query: 379 VKFGEAVWFKAGSQILA 429 VKFGE VWFKAGSQI + Sbjct: 122 VKFGEGVWFKAGSQIFS 138
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 218 bits (554), Expect = 6e-57 Identities = 105/133 (78%), Positives = 111/133 (83%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPP 210 LSS AGK +K PSS G AR TMRK+A K +SGSPWYG DRV YLGP SGE P Sbjct: 11 LSSPTLAGKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESP 70 Query: 211 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 390 SYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVKFG Sbjct: 71 SYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG 130 Query: 391 EAVWFKAGSQILA 429 EAVWFKAGSQI + Sbjct: 131 EAVWFKAGSQIFS 143
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 217 bits (553), Expect = 8e-57 Identities = 109/133 (81%), Positives = 115/133 (86%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPP 210 LSS + AGKAVK PS+ G RV+MRKT K QV+SGSPWYG DRV YLGP SGEPP Sbjct: 9 LSSPSLAGKAVKLGPSAPEVG--RVSMRKTVTK--QVSSGSPWYGPDRVKYLGPFSGEPP 64 Query: 211 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 390 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFG Sbjct: 65 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG 124 Query: 391 EAVWFKAGSQILA 429 EAVWFKAGSQI + Sbjct: 125 EAVWFKAGSQIFS 137
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 217 bits (552), Expect = 1e-56 Identities = 109/147 (74%), Positives = 115/147 (78%), Gaps = 10/147 (6%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLP---------SSSVFGEARVTMRK-TAAKAKQVASGSPWYGS 168 A C + S AFAG + +L + V GEARVTMRK T K AS SPWYG Sbjct: 2 ASCGIGSCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGP 61 Query: 169 DRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 348 DRVLYLGP SGEPPSYLTGEFPGDYGWDTAGLSADPE FAKNRELEVIHCRWAMLGALGC Sbjct: 62 DRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGC 121 Query: 349 VFPELLARNGVKFGEAVWFKAGSQILA 429 VFPELLARNGVKFGEAVWFKAG+QI + Sbjct: 122 VFPELLARNGVKFGEAVWFKAGAQIFS 148
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 217 bits (552), Expect = 1e-56 Identities = 110/134 (82%), Positives = 113/134 (84%), Gaps = 1/134 (0%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEP 207 LSS A AGKAVK PSSS +FG RV+MRKT K S SPWYG DRV YLGP SGE Sbjct: 8 LSSPALAGKAVKVAPSSSELFGNGRVSMRKTV---KAPVSDSPWYGPDRVKYLGPFSGEA 64 Query: 208 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 387 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKF Sbjct: 65 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKF 124 Query: 388 GEAVWFKAGSQILA 429 GEAVWFKAGSQI + Sbjct: 125 GEAVWFKAGSQIFS 138
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 213 bits (542), Expect = 2e-55 Identities = 104/128 (81%), Positives = 114/128 (89%), Gaps = 1/128 (0%) Frame = +1 Query: 49 AGKAVKNLPSS-SVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTG 225 AG+AVK P++ + G A+ TMRKTA+K+ V+SGSPWYG DRV YLGP SGEPPSYLTG Sbjct: 4 AGQAVKLSPNAPEIQGNAKFTMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTG 61 Query: 226 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWF 405 EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWF Sbjct: 62 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWF 121 Query: 406 KAGSQILA 429 KAGSQI + Sbjct: 122 KAGSQIFS 129
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 212 bits (539), Expect = 4e-55 Identities = 104/135 (77%), Positives = 110/135 (81%), Gaps = 2/135 (1%) Frame = +1 Query: 31 LSSQAFAGKAVKNL--PSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGE 204 LSS GK V+ PSS G AR TMRK+A K +SGSPWYG DRV YLGP SGE Sbjct: 8 LSSPTLTGKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGE 67 Query: 205 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 384 PSYLTGEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RNGVK Sbjct: 68 SPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVK 127 Query: 385 FGEAVWFKAGSQILA 429 FGEAVWFKAGSQI + Sbjct: 128 FGEAVWFKAGSQIFS 142
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 208 bits (529), Expect = 5e-54 Identities = 100/119 (84%), Positives = 105/119 (88%) Frame = +1 Query: 73 PSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWD 252 PS+ G RV+MRKTA+K V+SGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWD Sbjct: 3 PSTPQLGVGRVSMRKTASKT--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 60 Query: 253 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQILA 429 TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGEA WFKAGSQI + Sbjct: 61 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFS 119
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 207 bits (527), Expect = 9e-54 Identities = 105/147 (71%), Positives = 114/147 (77%), Gaps = 10/147 (6%) Frame = +1 Query: 19 APCXLSSQ-AFAGKAVKNLPSSS--------VFGEARVTMRKTAAKAKQVAS-GSPWYGS 168 A C + S+ AFAG + ++ + GEAR+TMRK K AS SPWYG Sbjct: 6 ASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGP 65 Query: 169 DRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 348 DRVLYLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC Sbjct: 66 DRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC 125 Query: 349 VFPELLARNGVKFGEAVWFKAGSQILA 429 VFPELLARNGVKFGEAVWFKAG+QI + Sbjct: 126 VFPELLARNGVKFGEAVWFKAGAQIFS 152
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 205 bits (522), Expect = 3e-53 Identities = 103/147 (70%), Positives = 114/147 (77%), Gaps = 10/147 (6%) Frame = +1 Query: 19 APCXLSSQ-AFAGKAVKNLPSSS--------VFGEARVTMRKTAAKAKQVAS-GSPWYGS 168 A C + S+ AFAG + ++ + GEAR+TMRK + AS SPWYG Sbjct: 6 ASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGP 65 Query: 169 DRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGC 348 DRV+YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC Sbjct: 66 DRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC 125 Query: 349 VFPELLARNGVKFGEAVWFKAGSQILA 429 VFPELLARNGVKFGEAVWFKAG+QI + Sbjct: 126 VFPELLARNGVKFGEAVWFKAGAQIFS 152
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 198 bits (504), Expect = 4e-51 Identities = 96/142 (67%), Positives = 108/142 (76%), Gaps = 5/142 (3%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSSSV-----FGEARVTMRKTAAKAKQVASGSPWYGSDRVLY 183 A C + AF G+AV + + FGE R+TMR+T A Q S WYG DR Y Sbjct: 2 ATCAIQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQ----SIWYGEDRPKY 57 Query: 184 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 363 LGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+ Sbjct: 58 LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEI 117 Query: 364 LARNGVKFGEAVWFKAGSQILA 429 L++NGVKFGEAVWFKAGSQI + Sbjct: 118 LSKNGVKFGEAVWFKAGSQIFS 139
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 193 bits (490), Expect = 2e-49 Identities = 97/125 (77%), Positives = 100/125 (80%) Frame = +1 Query: 55 KAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFP 234 K V L GEARV M +KA SGS WYGSDR LYLGP SG PPSYL+GEFP Sbjct: 18 KPVNELSRKVGAGEARVQMMAPKSKAP---SGSIWYGSDRPLYLGPFSGSPPSYLSGEFP 74 Query: 235 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG 414 GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGVKFGEAVWFKAG Sbjct: 75 GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAG 134 Query: 415 SQILA 429 SQI A Sbjct: 135 SQIFA 139
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 187 bits (476), Expect = 7e-48 Identities = 98/133 (73%), Positives = 105/133 (78%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPP 210 LSS + AG+A+K PS+ G RV+MRKTA K V+SGSPWYG DRV YLGP SGE P Sbjct: 8 LSSSSLAGQAMKLAPSTPELGVGRVSMRKTAPKT--VSSGSPWYGPDRVKYLGPFSGEAP 65 Query: 211 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG 390 SYLTGEF G LSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFG Sbjct: 66 SYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG 117 Query: 391 EAVWFKAGSQILA 429 EAVWFKAGSQI + Sbjct: 118 EAVWFKAGSQIFS 130
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 187 bits (475), Expect = 9e-48 Identities = 93/142 (65%), Positives = 103/142 (72%), Gaps = 5/142 (3%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSSSV-----FGEARVTMRKTAAKAKQVASGSPWYGSDRVLY 183 A + AFAG+ + V FG R TMR+T A Q S WYG DR Y Sbjct: 2 ATSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQ----SIWYGEDRPKY 57 Query: 184 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 363 LGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+ Sbjct: 58 LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEI 117 Query: 364 LARNGVKFGEAVWFKAGSQILA 429 L++NGV FGEAVWFKAGSQI + Sbjct: 118 LSKNGVTFGEAVWFKAGSQIFS 139
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 187 bits (475), Expect = 9e-48 Identities = 93/142 (65%), Positives = 103/142 (72%), Gaps = 5/142 (3%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSSSV-----FGEARVTMRKTAAKAKQVASGSPWYGSDRVLY 183 A + AFAG+ + V F R TMR+T A Q S WYG DR Y Sbjct: 2 ATSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQ----SIWYGEDRPKY 57 Query: 184 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 363 LGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+ Sbjct: 58 LGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEI 117 Query: 364 LARNGVKFGEAVWFKAGSQILA 429 L++NGVKFGEAVWFKAGSQI + Sbjct: 118 LSKNGVKFGEAVWFKAGSQIFS 139
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 186 bits (471), Expect = 3e-47 Identities = 96/139 (69%), Positives = 105/139 (75%), Gaps = 4/139 (2%) Frame = +1 Query: 19 APCXLSSQAFAGKAV---KNLPSSSVFGEA-RVTMRKTAAKAKQVASGSPWYGSDRVLYL 186 A + AFAG+ + +N V G RV+MR+T A + S WYG DR YL Sbjct: 2 ATSTIQQSAFAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPE----SIWYGPDRPKYL 57 Query: 187 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 366 GP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL Sbjct: 58 GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117 Query: 367 ARNGVKFGEAVWFKAGSQI 423 A+NGVKFGEAVWFKAGSQI Sbjct: 118 AKNGVKFGEAVWFKAGSQI 136
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 185 bits (469), Expect = 5e-47 Identities = 93/142 (65%), Positives = 103/142 (72%), Gaps = 5/142 (3%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSSSV-----FGEARVTMRKTAAKAKQVASGSPWYGSDRVLY 183 A + AFAG+ + V G RV+MR+T A S WYG DR Y Sbjct: 2 ATSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPT----SIWYGPDRPKY 57 Query: 184 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 363 LGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE+ Sbjct: 58 LGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEI 117 Query: 364 LARNGVKFGEAVWFKAGSQILA 429 L++NGVKFGEAVWFKAGSQI + Sbjct: 118 LSKNGVKFGEAVWFKAGSQIFS 139
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 184 bits (466), Expect = 1e-46 Identities = 93/142 (65%), Positives = 102/142 (71%), Gaps = 5/142 (3%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSSSV-----FGEARVTMRKTAAKAKQVASGSPWYGSDRVLY 183 A + AF GK + + FG+AR TMR+T A + S WYG DR Y Sbjct: 2 ATSAIQQSAFTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPE----SIWYGPDRPKY 57 Query: 184 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 363 LGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGC FPEL Sbjct: 58 LGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPEL 117 Query: 364 LARNGVKFGEAVWFKAGSQILA 429 L +NGVKFGEAVWFKAGSQI A Sbjct: 118 LEKNGVKFGEAVWFKAGSQIFA 139
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 183 bits (465), Expect = 1e-46 Identities = 85/99 (85%), Positives = 89/99 (89%) Frame = +1 Query: 133 KQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 312 K +S SPW+G D V YLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI Sbjct: 4 KVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 63 Query: 313 HCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQILA 429 H RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQI + Sbjct: 64 HSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFS 102
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 183 bits (464), Expect = 2e-46 Identities = 87/114 (76%), Positives = 94/114 (82%) Frame = +1 Query: 88 FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 267 F RVTMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 2 FEGGRVTMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 57 Query: 268 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQILA 429 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGEAVWFKAGSQI + Sbjct: 58 ADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFS 111
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 181 bits (458), Expect = 9e-46 Identities = 85/112 (75%), Positives = 94/112 (83%) Frame = +1 Query: 94 EARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 273 +AR+TMR+T A + S WYG DR YLGP S PSYLTGEFPGDYGWDTA +SAD Sbjct: 33 QARITMRRTVRSAPE----SIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSAD 88 Query: 274 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQILA 429 PETFAKNRELEVIHCRWAMLGALGCVFPELLA+NG+KFGEAVWFKAG+QI + Sbjct: 89 PETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFS 140
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 179 bits (455), Expect = 2e-45 Identities = 92/142 (64%), Positives = 109/142 (76%), Gaps = 5/142 (3%) Frame = +1 Query: 19 APCXLSSQAFAGKAVK---NLPSSSVFG--EARVTMRKTAAKAKQVASGSPWYGSDRVLY 183 A + S A AG+++ N S V G EARVTMR+T +K+ S + WYG+DR + Sbjct: 3 AATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKS--AGSDTIWYGADRPKF 60 Query: 184 LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 363 LGP SGE PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PEL Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120 Query: 364 LARNGVKFGEAVWFKAGSQILA 429 LA++GVKFGEAVWFKAG+QI + Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFS 142 Score = 29.3 bits (64), Expect = 4.2 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +1 Query: 229 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 378 +PG +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 179 bits (453), Expect = 3e-45 Identities = 84/110 (76%), Positives = 93/110 (84%) Frame = +1 Query: 100 RVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 279 R+TMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPE Sbjct: 32 RITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87 Query: 280 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQILA 429 TFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QI + Sbjct: 88 TFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFS 137 Score = 28.5 bits (62), Expect = 7.2 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +1 Query: 229 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 378 +PG +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 235
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 177 bits (449), Expect = 1e-44 Identities = 88/141 (62%), Positives = 102/141 (72%), Gaps = 4/141 (2%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSSSV----FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYL 186 A + S AFAG+ V + R +MR+T Q S WYG+DR +L Sbjct: 2 AASAIQSSAFAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQ----SIWYGADRPKFL 57 Query: 187 GPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 366 GP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+FPELL Sbjct: 58 GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELL 117 Query: 367 ARNGVKFGEAVWFKAGSQILA 429 ++NGV+FGEAVWFKAG+QI + Sbjct: 118 SKNGVQFGEAVWFKAGAQIFS 138
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 161 bits (407), Expect = 7e-40 Identities = 74/80 (92%), Positives = 76/80 (95%) Frame = +1 Query: 190 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 369 P SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPELL+ Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60 Query: 370 RNGVKFGEAVWFKAGSQILA 429 RNGVKFGEAVWFKAGSQI + Sbjct: 61 RNGVKFGEAVWFKAGSQIFS 80
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 153 bits (387), Expect = 1e-37 Identities = 76/112 (67%), Positives = 89/112 (79%), Gaps = 2/112 (1%) Frame = +1 Query: 100 RVTMRKTAAKAKQV-ASGSPWYGSDRVLYLGPLS-GEPPSYLTGEFPGDYGWDTAGLSAD 273 + T +KTAAKA +SG +YG +R +LGP S P+YLTGEFPGDYGWDTAGLSAD Sbjct: 16 KATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSAD 75 Query: 274 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQILA 429 PETF + RELE+IH RWAMLGALGC PELLA++G KFGEAVWFKAG+QI + Sbjct: 76 PETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFS 127 Score = 28.1 bits (61), Expect = 9.4 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = +1 Query: 229 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 378 +PG+ +D GL+ DP+TFA+ + E+ + R A G ++ G Sbjct: 177 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKG 225
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 151 bits (382), Expect = 6e-37 Identities = 71/92 (77%), Positives = 77/92 (83%), Gaps = 1/92 (1%) Frame = +1 Query: 157 WYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 336 WYG DRV YLGP S + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG Sbjct: 50 WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 109 Query: 337 ALGCVFPELLAR-NGVKFGEAVWFKAGSQILA 429 ALGCVFPE+L + GV+F E VWFKAGSQI + Sbjct: 110 ALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFS 141 Score = 30.8 bits (68), Expect = 1.5 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +1 Query: 229 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 378 +PG +D GL+ DP TFA+ + E+ + R AM G ++ G Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 149 bits (377), Expect = 2e-36 Identities = 72/101 (71%), Positives = 78/101 (77%), Gaps = 1/101 (0%) Frame = +1 Query: 130 AKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 309 A+ S WYG DRV YLGP S + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEV Sbjct: 38 ARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV 97 Query: 310 IHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQILA 429 IH RWAMLGALGC+FPE+L + V F E VWFKAGSQI + Sbjct: 98 IHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFS 138 Score = 31.2 bits (69), Expect = 1.1 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +1 Query: 229 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 378 +PG +D GL+ DP TFA+ + E+ + R AM G ++ G Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 149 bits (377), Expect = 2e-36 Identities = 80/118 (67%), Positives = 88/118 (74%) Frame = +1 Query: 76 SSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 255 SS++ A TM K AAK+K +S RV YLGP SGE PSYLTGEFPGDYGWDT Sbjct: 30 SSTLIVTAGFTMLKHAAKSKVSSSTC----DRRVKYLGPFSGEWPSYLTGEFPGDYGWDT 85 Query: 256 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQILA 429 AGLSA PETFAKNRELEVIH R AM ALGC+FPELL+ G FGEAVWFKAG+QI + Sbjct: 86 AGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFS 143
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 149 bits (375), Expect = 4e-36 Identities = 75/113 (66%), Positives = 86/113 (76%), Gaps = 1/113 (0%) Frame = +1 Query: 94 EARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 273 +A T + AA AK ++G WYG DR +LGP S P+YLTGEFPGDYGWDTAGLSAD Sbjct: 20 KAAGTKQTKAAPAK--SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSAD 77 Query: 274 PETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQILA 429 PETF K RELEVIH RWA+LGALG + PELL+ GVKFGE VWFKAG+QI + Sbjct: 78 PETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFS 130 Score = 30.8 bits (68), Expect = 1.5 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +1 Query: 229 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 378 +PG+ +D GL+ DP+TFA+ + E+ + R AM G ++ G Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKG 228
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 135 bits (340), Expect = 4e-32 Identities = 64/93 (68%), Positives = 77/93 (82%), Gaps = 2/93 (2%) Frame = +1 Query: 157 WYGSDRVLYLGPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 333 +YG DR +LGP S + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+L Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92 Query: 334 GALGCVFPELLAR-NGVKFGEAVWFKAGSQILA 429 GALG + PELL++ GV+FGE VWFKAG+QI A Sbjct: 93 GALGILTPELLSQYAGVQFGEPVWFKAGAQIFA 125 Score = 30.4 bits (67), Expect = 1.9 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +1 Query: 229 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 378 +PG +D GL+ DP+TFA+ + E+ + R AM LG ++ G Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKG 225
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 110 bits (276), Expect = 1e-24 Identities = 60/108 (55%), Positives = 74/108 (68%), Gaps = 2/108 (1%) Frame = +1 Query: 106 TMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETF 285 T + A +K +S + +YG D L + P TGEFPGDYGWDTAGLSADPETF Sbjct: 40 TKKGAKAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETF 98 Query: 286 AKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGE-AVWFKAGSQI 423 + RELE+IH R +LGALG V PELLA +G+KFG+ A+WFKAG+ I Sbjct: 99 KRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAI 146 Score = 32.3 bits (72), Expect = 0.50 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = +1 Query: 229 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 378 +PG+ +D GL+ DP+TFA+ + E+ + R AM LG ++ G Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKG 246
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 97.8 bits (242), Expect = 1e-20 Identities = 60/142 (42%), Positives = 76/142 (53%), Gaps = 10/142 (7%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASG------SPWYGSDRVLYL-- 186 L+ +A + + S S F + +K A AK A + WYG DR ++L Sbjct: 14 LNFRAVSRSSAPLASSPSTFKTVALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPD 73 Query: 187 GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 363 G L E P YL GE GDYG+D GL PE FAK + E+IH RWAMLGA G + PE Sbjct: 74 GLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEA 133 Query: 364 LARNGVKFG-EAVWFKAGSQIL 426 L + G G EAVWFK G+ +L Sbjct: 134 LNKYGANCGPEAVWFKTGALLL 155
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 82.8 bits (203), Expect = 3e-16 Identities = 42/107 (39%), Positives = 59/107 (55%) Frame = +1 Query: 100 RVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 279 RV+ T A+ + DR L+ PP +L G PGD+G+D GL++DPE Sbjct: 41 RVSKYSTTPTARSATTVCVAADPDRPLWFP--GSTPPPWLDGSLPGDFGFDPLGLASDPE 98 Query: 280 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 420 + N++ E++HCRWAMLGA G PELL + G+ W+ AG Q Sbjct: 99 SLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGI-LNTPSWYTAGEQ 144
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 77.4 bits (189), Expect = 1e-14 Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 2/116 (1%) Frame = +1 Query: 79 SSVFGEARVTMRKTAAK--AKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWD 252 +S G R+ + K A ++ VA + DR L+ PP +L G PGD+G+D Sbjct: 32 ASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFP--GSTPPEWLDGSLPGDFGFD 89 Query: 253 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQ 420 GL +DPE+ N + E++H RWAMLGA G PE L + GV W+ AG Q Sbjct: 90 PLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGV-LNTPSWYTAGEQ 144
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 75.1 bits (183), Expect = 7e-14 Identities = 35/76 (46%), Positives = 48/76 (63%) Frame = +1 Query: 196 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 375 + EPP+ LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PELL Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELL--- 249 Query: 376 GVKFGEAVWFKAGSQI 423 G+ WF+AG + Sbjct: 250 ----GKGAWFEAGDSV 261 Score = 72.4 bits (176), Expect = 4e-13 Identities = 35/73 (47%), Positives = 45/73 (61%) Frame = +1 Query: 205 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 384 PP YLTGE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PELL Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL------ 433 Query: 385 FGEAVWFKAGSQI 423 G WF+ ++ Sbjct: 434 -GNGAWFQIWDKV 445 Score = 63.9 bits (154), Expect = 2e-10 Identities = 31/68 (45%), Positives = 44/68 (64%) Frame = +1 Query: 208 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 387 PS+L GE+ GD G+D AGL+ADP+TF + R EV H R AML +G + P+ L Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYL------- 64 Query: 388 GEAVWFKA 411 G+ +W++A Sbjct: 65 GKGIWYEA 72
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 67.8 bits (164), Expect = 1e-11 Identities = 30/74 (40%), Positives = 46/74 (62%) Frame = +1 Query: 202 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 381 +PP++LTGE+P D G+D ++ADP +A+ R EV H R +ML +G + PELL Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELL----- 221 Query: 382 KFGEAVWFKAGSQI 423 G+ WF+ G+ + Sbjct: 222 --GKGAWFEVGNSV 233 Score = 38.5 bits (88), Expect = 0.007 Identities = 19/50 (38%), Positives = 28/50 (56%) Frame = +1 Query: 274 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQI 423 P + + R EV + R AML +GCV+PELL G VWF+ +++ Sbjct: 1 PTVYERMRVAEVFNGRLAMLAIVGCVYPELL-------GNGVWFEVWNKV 43
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 64.7 bits (156), Expect = 9e-11 Identities = 33/74 (44%), Positives = 42/74 (56%), Gaps = 1/74 (1%) Frame = +1 Query: 193 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 369 + G+P PSYL G PGD+G+D+ GL P + +E E+IHCRWAML G + PE L Sbjct: 50 MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL- 108 Query: 370 RNGVKFGEAVWFKA 411 G W KA Sbjct: 109 ------GLGNWVKA 116
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 60.1 bits (144), Expect = 2e-09 Identities = 28/71 (39%), Positives = 40/71 (56%) Frame = +1 Query: 208 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 387 P YLTG GD G+D GL+ DPE + E+++ RWAMLG G + PE+ + G+ Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI-I 122 Query: 388 GEAVWFKAGSQ 420 W+ AG + Sbjct: 123 NVPEWYDAGKE 133
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 57.8 bits (138), Expect = 1e-08 Identities = 46/122 (37%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Frame = +1 Query: 76 SSSVFGEARVTMRKTAAK-AKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWD 252 S SV +A +R + KQ A+ W+ S + L SYL G PGD+G+D Sbjct: 28 SQSVTRKASFVVRAASTPPVKQGANRQLWFASKQSL----------SYLDGRLPGDFGFD 77 Query: 253 TAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFPELLARNGVKFGEA--VWFK 408 GLS DPE F + + L EVI+ R+AMLGA G + PE+L + G+ E WF+ Sbjct: 78 PLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQ 136 Query: 409 AG 414 G Sbjct: 137 TG 138
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 57.4 bits (137), Expect = 1e-08 Identities = 30/44 (68%), Positives = 33/44 (75%), Gaps = 1/44 (2%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPW 159 LSS FAGKAVK PSSS + G R+TMRKTAAK K +SGSPW Sbjct: 8 LSSSTFAGKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPW 51
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 57.0 bits (136), Expect = 2e-08 Identities = 39/114 (34%), Positives = 51/114 (44%) Frame = +1 Query: 76 SSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 255 +S V T RK A A W + + G + P +L G PGD+G+D Sbjct: 33 NSKVGAGVSTTSRKLVVVAAAAAPKKSWIPAVK----GGGNFLDPEWLDGSLPGDFGFDP 88 Query: 256 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGS 417 GL DP RE E+IH RWAML LG + A G+ WF+AG+ Sbjct: 89 LGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQ--AWTGIP-----WFEAGA 135
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 56.2 bits (134), Expect = 3e-08 Identities = 29/44 (65%), Positives = 32/44 (72%), Gaps = 1/44 (2%) Frame = +1 Query: 31 LSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPW 159 LSS FAGK VK PSSS + G R+TMRKTAAK K +SGSPW Sbjct: 8 LSSSTFAGKTVKLAPSSSEITGNGRITMRKTAAKPKPASSGSPW 51
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 55.8 bits (133), Expect = 4e-08 Identities = 29/70 (41%), Positives = 35/70 (50%) Frame = +1 Query: 208 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 387 P +L G PGDYG+D GL DP RE E+IH RWAM LG G + Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAW 120 Query: 388 GEAVWFKAGS 417 WF+AG+ Sbjct: 121 SGIPWFEAGA 130
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 54.3 bits (129), Expect = 1e-07 Identities = 28/70 (40%), Positives = 35/70 (50%) Frame = +1 Query: 208 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 387 P +L G PGD+G+D GL DP RE E+IH RWAM LG G + Sbjct: 68 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFV-------GQAW 120 Query: 388 GEAVWFKAGS 417 WF+AG+ Sbjct: 121 SGIPWFEAGA 130
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 44.7 bits (104), Expect = 1e-04 Identities = 19/24 (79%), Positives = 22/24 (91%) Frame = +1 Query: 358 ELLARNGVKFGEAVWFKAGSQILA 429 ELL +NGVKFGEAVWFKAG+QI + Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFS 24
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 43.5 bits (101), Expect = 2e-04 Identities = 26/48 (54%), Positives = 31/48 (64%), Gaps = 1/48 (2%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSSS-VFGEARVTMRKTAAKAKQVASGSPW 159 A LSS +FAG+AVK PS+S + G R+TMRK A AK S SPW Sbjct: 4 ATMALSSPSFAGQAVKLSPSASEISGNGRITMRK--AVAKSAPSSSPW 49
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 41.6 bits (96), Expect = 8e-04 Identities = 26/48 (54%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Frame = +1 Query: 19 APCXLSSQAFAGKAVKNLPSSSV-FGEARVTMRKTAAKAKQVASGSPW 159 A LSS +FAG+AVK PS+S G R+TMRK A AK S SPW Sbjct: 4 AAMALSSPSFAGQAVKLSPSASENSGNGRITMRK--AVAKSAPSSSPW 49
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 40.8 bits (94), Expect = 0.001 Identities = 46/168 (27%), Positives = 60/168 (35%), Gaps = 47/168 (27%) Frame = +1 Query: 34 SSQAFAGKAVKNLPSSSVFGEARV---TMRKTAAKAKQVASGSP-WYGSDRVLYLGPLSG 201 +S + V ++ S+S AR T + + KAK V S P W+ Sbjct: 10 ASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKTVISDRPLWFPG----------A 59 Query: 202 EPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------------------ 294 + P YL G GDYG+D GL E AKN Sbjct: 60 KSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKST 119 Query: 295 --------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 396 RE E+IH RWAML LG + E L GV + +A Sbjct: 120 PFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWL--TGVTWQDA 165 Score = 33.5 bits (75), Expect = 0.22 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +1 Query: 175 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 345 VL +G + + + L E +PG +D GL++DP A+ + E+ H R AM+G LG Sbjct: 193 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 39.7 bits (91), Expect = 0.003 Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 4/77 (5%) Frame = +1 Query: 184 LGPLSGEPPSYLT-GEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALGCVFP 357 + P +G+ S L G PGD G+D GL+ +DP+ F +E E+ H R AM+ A G + Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191 Query: 358 ELLARN--GVKFGEAVW 402 E ++ + G +G+A + Sbjct: 192 EAVSGDTWGTYWGDATF 208
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 37.0 bits (84), Expect = 0.020 Identities = 41/146 (28%), Positives = 54/146 (36%), Gaps = 43/146 (29%) Frame = +1 Query: 88 FGEARVTMRKTAAKAKQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 267 FG+ + +K+A K V + P + Y G +S P +L G GDYG+D GL Sbjct: 36 FGKKKAAPKKSAKKT--VTTDRPLW------YPGAIS---PDWLDGSLVGDYGFDPFGLG 84 Query: 268 ADPE-----------TFAKN--------------------------------RELEVIHC 318 E AKN RE E+IH Sbjct: 85 KPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHG 144 Query: 319 RWAMLGALGCVFPELLARNGVKFGEA 396 RWAML LG + E L GV + +A Sbjct: 145 RWAMLATLGALSVEWL--TGVTWQDA 168 Score = 35.4 bits (80), Expect = 0.059 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +1 Query: 175 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 345 VL +G + + + L E +PG +D GL+ADPE A+ + E+ H R AM+ LG Sbjct: 196 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 36.2 bits (82), Expect = 0.035 Identities = 33/108 (30%), Positives = 38/108 (35%), Gaps = 45/108 (41%) Frame = +1 Query: 208 PSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 294 P +L G PGD G+D GLS E AKN Sbjct: 59 PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118 Query: 295 --------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEA 396 RE E+IH RWAML LG + E A GV + EA Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGALVAE--ATTGVSWVEA 164
>VE2_HPV25 (P36787) Regulatory protein E2| Length = 502 Score = 35.8 bits (81), Expect = 0.045 Identities = 38/123 (30%), Positives = 49/123 (39%) Frame = -3 Query: 400 KQPHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHR 221 ++P +RR R RRSR+ + S S S RSR + +Q RSR + R Sbjct: 249 RRPSSRTRRQQAQARQRRSRSKSRSRSRSQSRSRIRSRSRSRSRSESQSSKRRSRSRSRR 308 Query: 220 SGSSGAHQKAGRGRAHGQSRTTGCRRQPAWPLPPFCAW*REPHQKQTMMASSSLPCRQRL 41 S A RGR G TT R P A + Q+ A SS R R Sbjct: 309 KTS------ATRGRGPGSPTTTTSDRAARSPSTTSSAT-SQRSQRSRSRAGSSRGGRGRG 361 Query: 40 GKR 32 G+R Sbjct: 362 GRR 364 Score = 34.7 bits (78), Expect = 0.10 Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 1/81 (1%) Frame = -3 Query: 382 SRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPN-RSRQGTHRSGSSG 206 SRR ATRGR G GSP S R +R TT + RS++ R+GSS Sbjct: 306 SRRKTSATRGR----------GPGSPTTTTSDRAARSPSTTSSATSQRSQRSRSRAGSSR 355 Query: 205 AHQKAGRGRAHGQSRTTGCRR 143 + G R H S + +R Sbjct: 356 GGRGRGGRRRHRLSESPTSKR 376
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 35.4 bits (80), Expect = 0.059 Identities = 29/97 (29%), Positives = 33/97 (34%), Gaps = 43/97 (44%) Frame = +1 Query: 205 PPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------------------- 294 PP +L G GD G+D GL E AKN Sbjct: 65 PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124 Query: 295 -------------RELEVIHCRWAMLGALGCVFPELL 366 RE E+IH RWAMLG LG + E L Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEAL 161 Score = 30.8 bits (68), Expect = 1.5 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Frame = +1 Query: 175 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 342 VL +G + + S L E +PG Y +D GL+ADPE + E+ H R AM+ L Sbjct: 197 VLVVGYIEFQRNSELDPEKRIYPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254
>CWC22_DEBHA (Q6BU84) Pre-mRNA-splicing factor CWC22| Length = 637 Score = 35.0 bits (79), Expect = 0.077 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 1/96 (1%) Frame = -3 Query: 403 TKQPHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSR-QGT 227 T++ + P RGR + +GS S S+ RS G + + +RSR + Sbjct: 529 TEEMRDVLKNLPPEERGRSRSVSGSSRSGSSSYSRSRSYSRSSGSYSRSRSRSRSRSRSR 588 Query: 226 HRSGSSGAHQKAGRGRAHGQSRTTGCRRQPAWPLPP 119 R+GS G R ++ +SR+T R ++ P Sbjct: 589 SRTGSRGRTMSRDRSKSFSRSRSTSRSRGESFSRSP 624
>CDAN1_HUMAN (Q8IWY9) Codanin-1| Length = 1226 Score = 34.7 bits (78), Expect = 0.10 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 6/75 (8%) Frame = -3 Query: 370 GPATRGRRSRALQAWPNGSGSPPARGSWRRSR------GQQTTQQCPNRSRQGTHRSGSS 209 GP T + A A P G PP RS+ Q T + P +R+G R G Sbjct: 68 GPPTPAKTPGASAALPGRPGGPPRGSRGARSQLFPPTEAQSTAAEAP-LARRGGRRRGPG 126 Query: 208 GAHQKAGRGRAHGQS 164 A ++ GRG G S Sbjct: 127 PARERGGRGLEEGVS 141
>VE2_BPV4 (P08345) Regulatory protein E2| Length = 334 Score = 34.3 bits (77), Expect = 0.13 Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 1/123 (0%) Frame = -3 Query: 385 TSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSR-QGTHRSGSS 209 +S R G +T G+R G P R S R +RG+Q Q +RSR + RS + Sbjct: 127 SSLRVG-STGGQRGTQTGDHARGRSRPSPRSS-RDARGRQQRAQSSSRSRSRSRSRSPTK 184 Query: 208 GAHQKAGRGRAHGQSRTTGCRRQPAWPLPPFCAW*REPHQKQTMMASSSLPCRQRLGKRA 29 G H R R G RR+ P C P + SS P RQ + A Sbjct: 185 GPHSSGRDTRLPSPGRPPGGRRR-GTPERERCPGTPTPPTPDQVGGRSSTPKRQASSRLA 243 Query: 28 XMV 20 ++ Sbjct: 244 QLI 246
>YR705_MIMIV (Q5UNW3) Hypothetical protein R705| Length = 313 Score = 34.3 bits (77), Expect = 0.13 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 5/82 (6%) Frame = -3 Query: 382 SRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNR-----SRQGTHRS 218 SRR R SR+ + +GS S +R S RS G +T+ + S RS Sbjct: 200 SRRRSSNARSTSSRSSGSRSSGSRSSGSRSSGSRSTGSKTSSRSSGSKTSRSSGSSRSRS 259 Query: 217 GSSGAHQKAGRGRAHGQSRTTG 152 GSSG+ K+GR R + +S T+G Sbjct: 260 GSSGS--KSGRSR-NSRSGTSG 278 Score = 28.5 bits (62), Expect = 7.2 Identities = 22/73 (30%), Positives = 29/73 (39%) Frame = -3 Query: 382 SRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGA 203 SR G + G RS + SGS +R S ++ RSR RSG+SG Sbjct: 222 SRSSGSRSSGSRSTGSKTSSRSSGSKTSRSSGSSRSRSGSSGSKSGRSRNS--RSGTSGR 279 Query: 202 HQKAGRGRAHGQS 164 + G G S Sbjct: 280 SSNSRSGSRSGSS 292
>VE2_HPV05 (P06921) Regulatory protein E2| Length = 514 Score = 33.9 bits (76), Expect = 0.17 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%) Frame = -3 Query: 403 TKQPHRTS---RRFG--PATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRS 239 +KQP +T RR+G P+++ RRS+ Q S S RSR + +Q RS Sbjct: 237 SKQPQQTETRGRRYGRRPSSKSRRSQTQQR-----RSRSRHRSRSRSRSRSKSQTHTTRS 291 Query: 238 RQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRR 143 + + + R R+ G+S TT CRR Sbjct: 292 TTRSRSTSLTKTRALTSRSRSRGRSPTT-CRR 322 Score = 29.3 bits (64), Expect = 4.2 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 8/83 (9%) Frame = -3 Query: 400 KQPHRTSRRFGPAT-------RGRRSRALQAWPNGS-GSPPARGSWRRSRGQQTTQQCPN 245 + P R SR P+T R +R+RA + G+ GS +RG R RG+ Sbjct: 326 RSPRRRSR--SPSTSSSCTTQRSQRARAESSTTRGARGSRGSRGGSRGGRGR-------- 375 Query: 244 RSRQGTHRSGSSGAHQKAGRGRA 176 R+G S SS AH+++ G A Sbjct: 376 --RRGRSSSSSSPAHKRSRGGSA 396 Score = 29.3 bits (64), Expect = 4.2 Identities = 31/112 (27%), Positives = 42/112 (37%), Gaps = 22/112 (19%) Frame = -3 Query: 424 RSGIRP*TKQPHRTSRRFGPATRGR-----RSRALQAWPNGSGSPPA-------RGSWRR 281 RS R +K T+R TR R ++RAL + G P R RR Sbjct: 275 RSRSRSRSKSQTHTTRS---TTRSRSTSLTKTRALTSRSRSRGRSPTTCRRGGGRSPRRR 331 Query: 280 SRGQQTTQQCPNRSRQ----------GTHRSGSSGAHQKAGRGRAHGQSRTT 155 SR T+ C + Q G S S + GRGR G+S ++ Sbjct: 332 SRSPSTSSSCTTQRSQRARAESSTTRGARGSRGSRGGSRGGRGRRRGRSSSS 383
>VE2_HPV09 (P36780) Regulatory protein E2| Length = 461 Score = 33.9 bits (76), Expect = 0.17 Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Frame = -3 Query: 385 TSRRF-----GPATRGRRSRALQAWPNGSGSPPA-RGSWRRSRGQQTTQQCPNRSRQGTH 224 +SRR+ P TR +R R + G G R RS+G+ T++ R R+G Sbjct: 240 SSRRYQRKASSPTTRKKRQRQGEGEGEGEGEETNYRRQRSRSKGRTETERGGERRRRGRS 299 Query: 223 RSGSSGAHQKAGRGRAHGQSRTT 155 S S RGR G+ TT Sbjct: 300 SSADSTTPTDRRRGRGGGRGPTT 322
>HORN_HUMAN (Q86YZ3) Hornerin| Length = 2850 Score = 33.5 bits (75), Expect = 0.22 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 9/63 (14%) Frame = -3 Query: 322 NGSGSPPARG-------SWRRSRGQQTTQQCPNRSRQGTHRSGS--SGAHQKAGRGRAHG 170 +GSGS + G S + SRG++ + SR G H SGS S H + G G H Sbjct: 2123 HGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHS 2182 Query: 169 QSR 161 SR Sbjct: 2183 PSR 2185 Score = 31.6 bits (70), Expect = 0.85 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = -3 Query: 322 NGSGSPPARG-------SWRRSRGQQTTQQCPNRSRQGTHRSGS--SGAHQKAGRGRAHG 170 +GSGS + G S + SRG++ + S G H SGS S H + G G H Sbjct: 1183 HGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGHS 1242 Query: 169 QSR 161 SR Sbjct: 1243 PSR 1245 Score = 30.4 bits (67), Expect = 1.9 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = -3 Query: 322 NGSGSPPARG-------SWRRSRGQQTTQQCPNRSRQGTHRSGS--SGAHQKAGRGRAHG 170 +GSGS + G S + SRG++ + SR G H SGS S H + G G Sbjct: 1653 HGSGSGHSSGYGQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQS 1712 Query: 169 QSR 161 SR Sbjct: 1713 PSR 1715 Score = 30.4 bits (67), Expect = 1.9 Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 10/73 (13%) Frame = -3 Query: 319 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGT----------HRSGSSGAHQKAGRGRAHG 170 GSGS + G R G + Q P+R R G+ H SGS + G G Sbjct: 1340 GSGSSQSSGYGRHGAG---SGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSG 1396 Query: 169 QSRTTGCRRQPAW 131 QS G +W Sbjct: 1397 QSSGFGHHESSSW 1409 Score = 30.0 bits (66), Expect = 2.5 Identities = 19/64 (29%), Positives = 23/64 (35%) Frame = -3 Query: 322 NGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRR 143 +GSG P+RG G S G H SGS + G GQS G Sbjct: 2294 SGSGQSPSRGRHGSGSGHS--------SSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHE 2345 Query: 142 QPAW 131 +W Sbjct: 2346 SSSW 2349 Score = 30.0 bits (66), Expect = 2.5 Identities = 19/64 (29%), Positives = 23/64 (35%) Frame = -3 Query: 322 NGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRR 143 +GSG P+RG G S G H SGS + G GQS G Sbjct: 1824 SGSGQSPSRGRHGSGSGHS--------SSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHE 1875 Query: 142 QPAW 131 +W Sbjct: 1876 SSSW 1879 Score = 29.3 bits (64), Expect = 4.2 Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 9/63 (14%) Frame = -3 Query: 322 NGSGSPPARG-------SWRRSRGQQTTQQCPNRSRQGTHRSGS--SGAHQKAGRGRAHG 170 +GSGS + G S + SR +Q S G H SGS S H + G G H Sbjct: 716 HGSGSSHSSGYRKHGSRSGQSSRSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHS 775 Query: 169 QSR 161 SR Sbjct: 776 PSR 778 Score = 28.5 bits (62), Expect = 7.2 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 9/63 (14%) Frame = -3 Query: 322 NGSGSPPARG-------SWRRSRGQQTTQQCPNRSRQGTHRSGS--SGAHQKAGRGRAHG 170 +GSGS + G S + SRG++ + S G H SGS S H + G G Sbjct: 2593 HGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQS 2652 Query: 169 QSR 161 SR Sbjct: 2653 PSR 2655
>HIS1_XANAC (Q8PLH0) ATP phosphoribosyltransferase (EC 2.4.2.17) (ATP-PRTase)| (ATP-PRT) Length = 304 Score = 33.5 bits (75), Expect = 0.22 Identities = 22/55 (40%), Positives = 28/55 (50%) Frame = -1 Query: 411 GLEPNSLTELHAVSGQQLGEDAAERSKHGPTAVDHLQLAVLGEGLGVSRQPSSVP 247 GL + + +L V +L E AAER +HG A H AV G G G R +VP Sbjct: 66 GLIADGVCDLGIVGQNELEEQAAERRRHGLPAAYH---AVRGVGFGQCRLMLAVP 117
>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)| Length = 2469 Score = 33.1 bits (74), Expect = 0.29 Identities = 38/133 (28%), Positives = 51/133 (38%), Gaps = 16/133 (12%) Frame = -3 Query: 397 QPHRTSRRFGPATRGRRSRALQAWPN----GSGSPPARGSWRRSRGQQTTQQCPNRSRQG 230 QPHR + PA S A+ P+ G G+PP +W P+ + QG Sbjct: 301 QPHRGA----PAPEAFGSPAVHLAPDLAFQGDGAPPLDATWPFGAS-------PSHAAQG 349 Query: 229 THRSGSSGAHQKAGRGR---------AHGQSRTTGCRRQPAWPLP---PFCAW*REPHQK 86 H +G +G H GR G S T R + AW +P P C P ++ Sbjct: 350 -HSAGRAGGHLHPTAGRPGFEGNEFAPAGASSLTAPRGREAWLVPVPSPACVSNTHPSRR 408 Query: 85 QTMMASSSLPCRQ 47 A S P RQ Sbjct: 409 SQDPALSP-PIRQ 420
>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 32.7 bits (73), Expect = 0.38 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = +1 Query: 91 GEARVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 267 G A +R T + + S PW+G ++ L G P + + FPG G G+ Sbjct: 107 GPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVG 166 Query: 268 ADPETFAKNRELEVIHCR 321 AD A R++ H R Sbjct: 167 ADR---AYGRDIVEAHYR 181
>MTC1_COREQ (P42828) Modification methylase CeqI (EC 2.1.1.72)| (Adenine-specific methyltransferase CeqI) (M.CeqI) Length = 517 Score = 32.7 bits (73), Expect = 0.38 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Frame = -3 Query: 307 PPARGSWRRSRGQQTTQQCPNRSRQGTHR---SGSSGAHQKAGRGRAHGQS-RTTGCRRQ 140 P RG W R + + P R R+ R G + A + GR HG+S R TG R Q Sbjct: 13 PRGRGRWPRLSRRSGCLEVPGRPRRPFLRPTVPGPTSARPRRGRA-PHGRSTRCTGWRVQ 71 Query: 139 PAWPLPPF 116 ++ PPF Sbjct: 72 LSFSCPPF 79
>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 32.7 bits (73), Expect = 0.38 Identities = 29/111 (26%), Positives = 43/111 (38%), Gaps = 9/111 (8%) Frame = +1 Query: 16 NAPCXLSSQAFAGKAVKNLPSSSVFGE--------ARVTMRKTAAKAKQVASGS-PWYGS 168 N+ LS A + P+ VF E A +R T + + S PW+G Sbjct: 73 NSDMYLSPVAMFRDPFRKEPNKLVFCEVFKYNQKPAETNLRHTCKRIMDMVSNQHPWFGM 132 Query: 169 DRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 321 ++ L G P + + FPG G G+ AD A R++ H R Sbjct: 133 EQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGADK---AYRRDIMEAHYR 180
>SMUF1_DROME (Q9V853) E3 ubiquitin-protein ligase Smurf1 (EC 6.3.2.-) (Smad| ubiquitination regulatory factor 1 homolog) (DSmurf) (Lethal with a checkpoint kinase protein) Length = 1061 Score = 32.7 bits (73), Expect = 0.38 Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 3/94 (3%) Frame = -3 Query: 391 HRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCP-NRSRQGTHRSG 215 H + PA G SR+ A + P + S RRS QQ + RS +GT G Sbjct: 430 HSPNANSTPAGSGGGSRSYTA------ATPGQRSQRRSSRQQGEESSTRRRSSRGTRNGG 483 Query: 214 SSGAHQKAGRGRAHGQSRTTGCRR--QPAWPLPP 119 +SG G G+ + + + +P LPP Sbjct: 484 TSGGGGGGGSGQRYASAAIAAANQAARPFLDLPP 517
>SFRS4_HUMAN (Q08170) Splicing factor, arginine/serine-rich 4 (Pre-mRNA-splicing| factor SRP75) (SRP001LB) Length = 494 Score = 32.7 bits (73), Expect = 0.38 Identities = 21/71 (29%), Positives = 31/71 (43%) Frame = -3 Query: 370 GPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKA 191 G GR+ R ++ P R S+ RSR ++ SR+ RSGSS + Sbjct: 162 GTEVNGRKIRLVEDKPGSR----RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSK 217 Query: 190 GRGRAHGQSRT 158 R R+ SR+ Sbjct: 218 SRSRSRSGSRS 228
>SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of| white-apricot homolog 2) (Clk4-associating SR-related protein) Length = 653 Score = 32.3 bits (72), Expect = 0.50 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 9/91 (9%) Frame = -3 Query: 403 TKQPHRTSRRFGPATRG---------RRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQC 251 ++ HR SR PA RG RSR+ + G+ P S S + + Sbjct: 426 SRDGHRYSR--SPARRGGYVPRRRSRSRSRSGDRYKRGARGPRHHSS---SHSRSSWSLS 480 Query: 250 PNRSRQGTHRSGSSGAHQKAGRGRAHGQSRT 158 P+RSR T RSGS + R ++H QS++ Sbjct: 481 PSRSRSVT-RSGSRSQSRSRSRSQSHSQSQS 510
>HORN_MOUSE (Q8VHD8) Hornerin| Length = 2496 Score = 32.3 bits (72), Expect = 0.50 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = -3 Query: 319 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 176 GSGS R S +SRG+ T+++ R G+ GSSG Q ++G+GR+ Sbjct: 1815 GSGS---RNSSTQSRGRSTSRESSTSQRFGSGSGGSSGFSQGRSGQGRS 1860 Score = 32.3 bits (72), Expect = 0.50 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = -3 Query: 319 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 176 GSGS R S +SRG+ T+++ R G+ GSSG Q ++G+GR+ Sbjct: 1467 GSGS---RNSSTQSRGRSTSRESSTSQRFGSGSGGSSGFSQGRSGQGRS 1512 Score = 32.3 bits (72), Expect = 0.50 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = -3 Query: 319 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 176 GSGS R S +SRG+ T+++ R G+ GSSG Q ++G+GR+ Sbjct: 1119 GSGS---RNSSTQSRGRSTSRESSTSQRFGSGSGGSSGFSQGRSGQGRS 1164 Score = 32.3 bits (72), Expect = 0.50 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%) Frame = -3 Query: 319 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 176 GSGS R S +SRG+ T+++ R G+ GSSG Q ++G+GR+ Sbjct: 770 GSGS---RNSSTQSRGRSTSRESSTSQRFGSGSGGSSGFSQGRSGQGRS 815 Score = 30.4 bits (67), Expect = 1.9 Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 15/92 (16%) Frame = -3 Query: 382 SRRFGPATRGR----RSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQG 230 SR +RGR S Q + +GSG S G R SRG Q S + Sbjct: 2337 SRNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRS 2396 Query: 229 THRSGS---SGAHQ---KAGRGRAHGQSRTTG 152 H+SGS SG+ Q +G HG S ++G Sbjct: 2397 QHQSGSRHGSGSGQFPISGQQGSHHGHSSSSG 2428 Score = 30.4 bits (67), Expect = 1.9 Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 15/92 (16%) Frame = -3 Query: 382 SRRFGPATRGR----RSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQG 230 SR +RGR S Q + +GSG S G R SRG Q S + Sbjct: 2166 SRNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRS 2225 Query: 229 THRSGS---SGAHQ---KAGRGRAHGQSRTTG 152 H+SGS SG+ Q +G HG S ++G Sbjct: 2226 QHQSGSRHGSGSGQFPISGQQGSHHGHSSSSG 2257 Score = 30.4 bits (67), Expect = 1.9 Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 15/92 (16%) Frame = -3 Query: 382 SRRFGPATRGR----RSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQG 230 SR +RGR S Q + +GSG S G R SRG Q S + Sbjct: 1995 SRNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRS 2054 Query: 229 THRSGS---SGAHQ---KAGRGRAHGQSRTTG 152 H+SGS SG+ Q +G HG S ++G Sbjct: 2055 QHQSGSRHGSGSGQFPISGQQGSHHGHSSSSG 2086 Score = 30.4 bits (67), Expect = 1.9 Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 15/92 (16%) Frame = -3 Query: 382 SRRFGPATRGR----RSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQG 230 SR +RGR S Q + +GSG S G R SRG Q S + Sbjct: 1299 SRNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRN 1358 Query: 229 THRSGS---SGAHQ---KAGRGRAHGQSRTTG 152 H+SGS SG+ Q +G HG S ++G Sbjct: 1359 QHQSGSRHGSGSGQFPISGQQGSHHGHSSSSG 1390 Score = 30.4 bits (67), Expect = 1.9 Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 15/92 (16%) Frame = -3 Query: 382 SRRFGPATRGR----RSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQG 230 SR +RGR S Q + +GSG S G R SRG Q S + Sbjct: 951 SRNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRS 1010 Query: 229 THRSGS---SGAHQ---KAGRGRAHGQSRTTG 152 H+SGS SG+ Q +G HG S ++G Sbjct: 1011 QHQSGSRHGSGSGQFPISGQQGSHHGHSSSSG 1042 Score = 30.4 bits (67), Expect = 1.9 Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 15/92 (16%) Frame = -3 Query: 382 SRRFGPATRGR----RSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQG 230 SR +RGR S Q + +GSG S G R SRG Q S + Sbjct: 602 SRNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRS 661 Query: 229 THRSGS---SGAHQ---KAGRGRAHGQSRTTG 152 H+SGS SG+ Q +G HG S ++G Sbjct: 662 QHQSGSRHGSGSGQFPISGQQGSHHGHSSSSG 693 Score = 29.6 bits (65), Expect = 3.2 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Frame = -3 Query: 382 SRRFGPATRGRRS--RALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSS 209 S R+G A+ G+ S R+ Q+ G +R S +SRG+ T+++ R G+ SS Sbjct: 1271 SGRYG-ASSGQTSGCRSGQSTRYGGQGSGSRNSSTQSRGRSTSRESSTSQRYGSGSGESS 1329 Query: 208 GAHQ-KAGRGRA 176 G Q +G+GR+ Sbjct: 1330 GFSQGGSGQGRS 1341 Score = 28.9 bits (63), Expect = 5.5 Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 15/92 (16%) Frame = -3 Query: 382 SRRFGPATRGR----RSRALQAWPNGSG-----SPPARGSWRRSRGQQTTQQCPNRSRQG 230 SR +RGR S Q +GSG S G R SRG Q S + Sbjct: 1647 SRNSSTQSRGRSTSRESSTSQRCGSGSGESSGFSQGGSGQGRSSRGGQQGSFSGQTSGRS 1706 Query: 229 THRSGS---SGAHQ---KAGRGRAHGQSRTTG 152 H+SGS SG+ Q +G HG S ++G Sbjct: 1707 QHQSGSRHGSGSGQFPISGQQGSHHGHSSSSG 1738 Score = 28.5 bits (62), Expect = 7.2 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -3 Query: 319 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 176 GSGS R S +SRG+ T+++ R G+ SSG Q +G+GR+ Sbjct: 2334 GSGS---RNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRS 2379 Score = 28.5 bits (62), Expect = 7.2 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -3 Query: 319 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 176 GSGS R S +SRG+ T+++ R G+ SSG Q +G+GR+ Sbjct: 2163 GSGS---RNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRS 2208 Score = 28.5 bits (62), Expect = 7.2 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -3 Query: 319 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 176 GSGS R S +SRG+ T+++ R G+ SSG Q +G+GR+ Sbjct: 1992 GSGS---RNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRS 2037 Score = 28.5 bits (62), Expect = 7.2 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -3 Query: 319 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 176 GSGS R S +SRG+ T+++ R G+ SSG Q +G+GR+ Sbjct: 948 GSGS---RNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRS 993 Score = 28.5 bits (62), Expect = 7.2 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -3 Query: 319 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ-KAGRGRA 176 GSGS R S +SRG+ T+++ R G+ SSG Q +G+GR+ Sbjct: 599 GSGS---RNSSTQSRGRSTSRESSTSQRYGSGSGESSGFSQGGSGQGRS 644 Score = 28.1 bits (61), Expect = 9.4 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 1/82 (1%) Frame = -3 Query: 391 HRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGS 212 H S G G + W +GSGS + G + + Q + +RQG Sbjct: 2250 HGHSSSSGTHNSGSSQSSSTQWSHGSGSEQSSGLGQYG---SPSGQTSSSTRQG------ 2300 Query: 211 SGAHQKAGRGRAHGQS-RTTGC 149 SG Q +G GR S +T+GC Sbjct: 2301 SGQGQASGSGRYGASSGQTSGC 2322 Score = 28.1 bits (61), Expect = 9.4 Identities = 30/120 (25%), Positives = 43/120 (35%), Gaps = 30/120 (25%) Frame = -3 Query: 403 TKQPHRTSRRFGPATRGR---------RSRALQAWPNGSGSPPARGSWRR---------- 281 T + TS+RFG + G + R+ + GS S GS + Sbjct: 1830 TSRESSTSQRFGSGSGGSSGFSQGRSGQGRSSRGGQQGSFSGQTEGSQQHGSCCGQSSGY 1889 Query: 280 -----------SRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPA 134 S GQQ + + S GTH SG S + + G G G+S G P+ Sbjct: 1890 GQNEYGSGHSASSGQQGSHYSQSSS-YGTHNSGGSPSSSQRGHGSRSGRSSGLGQYGSPS 1948 Score = 28.1 bits (61), Expect = 9.4 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 6/75 (8%) Frame = -3 Query: 382 SRRFGPATRGRRSRALQAWPN-----GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRS 218 S R+G A+ G+ S P GSGS R S +SRG+ T+++ R G+ Sbjct: 1619 SGRYG-ASSGQTSGCGSGQPTRYGEQGSGS---RNSSTQSRGRSTSRESSTSQRCGSGSG 1674 Query: 217 GSSGAHQ-KAGRGRA 176 SSG Q +G+GR+ Sbjct: 1675 ESSGFSQGGSGQGRS 1689 Score = 28.1 bits (61), Expect = 9.4 Identities = 30/120 (25%), Positives = 43/120 (35%), Gaps = 30/120 (25%) Frame = -3 Query: 403 TKQPHRTSRRFGPATRGR---------RSRALQAWPNGSGSPPARGSWRR---------- 281 T + TS+RFG + G + R+ + GS S GS + Sbjct: 1482 TSRESSTSQRFGSGSGGSSGFSQGRSGQGRSSRGGQQGSFSGQTEGSQQHGSCCGQSSGY 1541 Query: 280 -----------SRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPA 134 S GQQ + + S GTH SG S + + G G G+S G P+ Sbjct: 1542 GQNEYGSGHSASSGQQGSHYSQSSS-YGTHNSGGSPSSSQRGHGSRSGRSSGLGQYGSPS 1600 Score = 28.1 bits (61), Expect = 9.4 Identities = 30/120 (25%), Positives = 43/120 (35%), Gaps = 30/120 (25%) Frame = -3 Query: 403 TKQPHRTSRRFGPATRGR---------RSRALQAWPNGSGSPPARGSWRR---------- 281 T + TS+RFG + G + R+ + GS S GS + Sbjct: 1134 TSRESSTSQRFGSGSGGSSGFSQGRSGQGRSSRGGQQGSFSGQTEGSQQHGSCCGQSSGY 1193 Query: 280 -----------SRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPA 134 S GQQ + + S GTH SG S + + G G G+S G P+ Sbjct: 1194 GQNEYGSGHSASSGQQGSHYSQSSS-YGTHNSGGSPSSSQRGHGSRSGRSSGLGQYGSPS 1252
>PALH_MAGGR (Q52E66) pH-response regulator protein palH/RIM21| Length = 829 Score = 32.0 bits (71), Expect = 0.65 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 5/77 (6%) Frame = -3 Query: 424 RSGIR--P*TKQPHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQ- 254 R+G R P + P +S++ G ++RG S A + W + + P RG RS + Q Sbjct: 622 RTGTRVGPDSDDPSASSQQGGESSRGSESTAAKGWRTLAQTLPFRGGTARSAEDSSDSQS 681 Query: 253 --CPNRSRQGTHRSGSS 209 +RS+ R G S Sbjct: 682 TTSKSRSKLQVSREGKS 698
>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)| Length = 1206 Score = 32.0 bits (71), Expect = 0.65 Identities = 23/85 (27%), Positives = 43/85 (50%) Frame = -2 Query: 410 ALNQTASPNFTPFRASNSGKTQPSAPSMAQRQWITSSSRFLAKVSGSADNPAVSQP*SPG 231 +L + S + P +S+SG + S P Q+Q ++S++ S S+ N + ++ SP Sbjct: 224 SLATSTSTSLAPKSSSSSGGSN-STPQQQQQQLVSSNN------SSSSSNNSFTKASSPN 276 Query: 230 NSPVR*LGGSPESGPR*STRSEPYH 156 N+ R +GG+ S +T + H Sbjct: 277 NNGARSVGGAATSAATGTTAAAGSH 301
>STAG2_HUMAN (Q8N3U4) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)| Length = 1231 Score = 31.6 bits (70), Expect = 0.85 Identities = 16/52 (30%), Positives = 29/52 (55%) Frame = +1 Query: 277 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQILAR 432 ET +K R+++ I C ++ +L +F E++ NG F + +G + LAR Sbjct: 902 ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELAR 953
>MECT1_MOUSE (Q68ED7) Mucoepidermoid carcinoma translocated protein 1 homolog| Length = 630 Score = 31.6 bits (70), Expect = 0.85 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 3/70 (4%) Frame = -3 Query: 394 PHRTSRRFGPATRGRRSRALQAWPNGSG--SPPARGSWRRSRGQQTTQQCP-NRSRQGTH 224 PHR P + + R + P G+ SPPA SWRR+ Q S+ + Sbjct: 114 PHRR-----PLSVDKHGRQADSCPYGTVYLSPPADTSWRRTNSDSALHQSTMTPSQAESF 168 Query: 223 RSGSSGAHQK 194 GS AHQK Sbjct: 169 TGGSQDAHQK 178
>Y1711_VIBCH (Q9KRD1) UPF0313 protein VC1711| Length = 789 Score = 31.6 bits (70), Expect = 0.85 Identities = 21/84 (25%), Positives = 38/84 (45%) Frame = -3 Query: 388 RTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSS 209 R ++ G +++ Q P GS ++ + + G Q+ + NR +QG S + Sbjct: 707 RGNKSGGQGRPNSGNKSNQGKPAGSKPTGSKPTANKPAGNQSARSEQNRGQQGQRGSATG 766 Query: 208 GAHQKAGRGRAHGQSRTTGCRRQP 137 G Q +GR + G + +RQP Sbjct: 767 GKPQGSGRPASRGNT-----QRQP 785
>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.6 bits (70), Expect = 0.85 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Frame = +1 Query: 139 VASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH- 315 V+S PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 316 --CRWAMLGALGC---VFP-----ELLARNGVKFGEAVW 402 C +A + G V P ++ G++ G+ +W Sbjct: 180 RACLYAGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.6 bits (70), Expect = 0.85 Identities = 35/149 (23%), Positives = 58/149 (38%), Gaps = 20/149 (13%) Frame = +1 Query: 16 NAPCXLSSQAFAGKAVKNLPSSSVFGE--------ARVTMRKTAAKAKQVASGS-PWYGS 168 N+ LS A + P+ VF E A +R + + + S PW+G Sbjct: 73 NSDMYLSPVAMFRDPFRKEPNKLVFCEVFKYNRKPAETNLRHSCKRIMDMVSNQHPWFGM 132 Query: 169 DRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH---CRWA---M 330 ++ L G P + + FPG G G+ AD A R++ H C +A + Sbjct: 133 EQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYRACLYAGVKI 189 Query: 331 LGALGCVFP-----ELLARNGVKFGEAVW 402 G V P ++ G++ G+ +W Sbjct: 190 TGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>PQQF_PSEPK (Q88QV3) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)| (Pyrroloquinoline quinone biosynthesis protein F) Length = 766 Score = 31.6 bits (70), Expect = 0.85 Identities = 21/56 (37%), Positives = 28/56 (50%) Frame = -1 Query: 228 LTGQVARGLTRKRAEVEHTVRAVPRAAGGNLLGLCRRFAHGDASLTKNRR*WQVLH 61 L GQV TR+RA + P A GG L LC+ A D + + RR +V+H Sbjct: 75 LGGQV-NASTRERA-TDFFFEVPPNALGGGLERLCQMLAEPDLGIERQRREREVIH 128
>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.2 bits (69), Expect = 1.1 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Frame = +1 Query: 97 ARVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 273 A +R T + + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 274 PETFAKNRELEVIHCR 321 A R++ H R Sbjct: 168 K---AYGRDIVEAHYR 180
>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.2 bits (69), Expect = 1.1 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Frame = +1 Query: 97 ARVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 273 A +R T + + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 274 PETFAKNRELEVIHCR 321 A R++ H R Sbjct: 168 K---AYGRDIVEAHYR 180
>YHL1_EBV (P03181) Hypothetical protein BHLF1| Length = 660 Score = 31.2 bits (69), Expect = 1.1 Identities = 33/124 (26%), Positives = 41/124 (33%), Gaps = 27/124 (21%) Frame = -3 Query: 412 RP*TKQPHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQ------------ 269 RP T P R SRR GPA + + + P G S P R R G Sbjct: 80 RPGTPAPSRQSRRTGPAEQADHAHSN---PTGGCSDPQRSPRTRQAGYALGEGSAGLGSR 136 Query: 268 ----------QTTQQCPNRSRQGTHRSGSSGAHQKAGRGR-----AHGQSRTTGCRRQPA 134 Q + + P R RSG+ H G G+ G+ G PA Sbjct: 137 GPRPHPAFQVQWSARNPGCPRTWRRRSGAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTPA 196 Query: 133 WPLP 122 P P Sbjct: 197 APGP 200
>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) Length = 392 Score = 31.2 bits (69), Expect = 1.1 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = +1 Query: 97 ARVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 273 A +R T K ++ + PW+G ++ L ++G P + FPG G G+ AD Sbjct: 109 AETNLRHTCKKIMEMVNDHRPWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168
>SFRS4_MOUSE (Q8VE97) Splicing factor, arginine/serine-rich 4| Length = 489 Score = 30.8 bits (68), Expect = 1.5 Identities = 20/71 (28%), Positives = 30/71 (42%) Frame = -3 Query: 370 GPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKA 191 G GR+ R ++ P R S+ RSR ++ SR+ RSGSS + Sbjct: 162 GTEVNGRKIRLVEDKPGSR----RRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSK 217 Query: 190 GRGRAHGQSRT 158 R R+ S + Sbjct: 218 SRSRSRSGSHS 228
>GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 30.8 bits (68), Expect = 1.5 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Frame = +1 Query: 97 ARVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 273 A +R T + + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 274 PETFAKNRELEVIHCR 321 A R++ H R Sbjct: 168 R---AYGRDIVEAHYR 180
>IF2_STIAU (P55875) Translation initiation factor IF-2| Length = 1054 Score = 30.8 bits (68), Expect = 1.5 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Frame = -3 Query: 367 PATRGRRSRALQAWPN-GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKA 191 P+T GR AWP+ GS A G+ R S G + R R + R+ +A Sbjct: 252 PSTSGR----WHAWPSRGSSGRFAHGAGRPS-GWTFARWTSGRPRAASRRTAVQRPSGRA 306 Query: 190 GRGRAHGQSRTTG 152 G G +HG R G Sbjct: 307 GAGASHGLQRRKG 319
>VE2_HPV19 (P36786) Regulatory protein E2| Length = 493 Score = 30.8 bits (68), Expect = 1.5 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 1/73 (1%) Frame = -3 Query: 382 SRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSS-G 206 SRR TRGR G GSP A + SR T + +G+ R G S G Sbjct: 293 SRRKASTTRGR----------GRGSPTATSD-QSSRSPSATSSTTSLRSRGSSRVGRSRG 341 Query: 205 AHQKAGRGRAHGQ 167 + GR R G+ Sbjct: 342 GRSRVGRSRGRGK 354
>MECT1_HUMAN (Q6UUV9) Mucoepidermoid carcinoma translocated protein 1| (Transducer of regulated cAMP response element-binding protein 1) (Transducer of CREB protein 1) Length = 634 Score = 30.8 bits (68), Expect = 1.5 Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 3/70 (4%) Frame = -3 Query: 394 PHRTSRRFGPATRGRRSRALQAWPNGSG--SPPARGSWRRSRGQQTTQQCPNRSRQ-GTH 224 PHR P + + R + P G+ SPPA SWRR+ Q Q + Sbjct: 114 PHRR-----PLSVDKHGRQADSCPYGTMYLSPPADTSWRRTNSDSALHQSTMTPTQPESF 168 Query: 223 RSGSSGAHQK 194 SGS HQK Sbjct: 169 SSGSQDVHQK 178
>EP84_HCMVA (P17151) Early phosphoprotein p84| Length = 684 Score = 30.8 bits (68), Expect = 1.5 Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 5/73 (6%) Frame = -3 Query: 367 PATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSG-----A 203 P + GRR RA G G R S R++ ++ +R R H Sbjct: 584 PPSGGRRGRARNNTRGGGGGGGGRNSRRQAASSSSSSSRRSRRRNNRHEDEEDNDPLLRL 643 Query: 202 HQKAGRGRAHGQS 164 Q AG GR G S Sbjct: 644 SQVAGNGRRRGPS 656
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 30.8 bits (68), Expect = 1.5 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 12/102 (11%) Frame = -3 Query: 397 QPHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSR-------GQQTTQQCPNRS 239 QP R+ P + + + + P+G+ S + ++ + GQQ QQ P+++ Sbjct: 3752 QPQMQGRQAAPGPQQSQPPSSRQTPSGTASRQPQTQQQQQQQQQQQGLGQQAPQQAPSQA 3811 Query: 238 R-----QGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPAWP 128 R Q T R + A Q AG+ + TT QPA P Sbjct: 3812 RLQPQSQPTTRGTAPAASQPAGKPQ---PGPTTAPGPQPAGP 3850
>HSP1_ISOMA (P42136) Sperm protamine P1| Length = 66 Score = 30.8 bits (68), Expect = 1.5 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Frame = -3 Query: 301 ARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHG--QSRTTGCRRQ 140 +R +RR RG+++ R R R G S ++ G+GRAH + R +G RR+ Sbjct: 10 SRSRFRRRRGRRS------RVRGRDARQGRSSRRRRRGKGRAHSGKKGRRSGSRRR 59
>VE2_HPV5B (P26545) Regulatory protein E2| Length = 514 Score = 30.4 bits (67), Expect = 1.9 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Frame = -3 Query: 400 KQPHRTSRR---FGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQG 230 + P R SR + T R RA P G+ +RGS SRG + R+G Sbjct: 326 RSPRRRSRSPSTYSSCTTQRSQRARAESPTTRGARGSRGSRGGSRGGRL-------RRRG 378 Query: 229 THRSGSSGAHQKAGRGRA 176 S SS AH+++ G A Sbjct: 379 RSSSSSSPAHKRSRGGSA 396 Score = 30.4 bits (67), Expect = 1.9 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 5/92 (5%) Frame = -3 Query: 403 TKQPHRTS---RRFG--PATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRS 239 +KQP +T RR+G P+++ RRS+ Q S S S RSR + T + + Sbjct: 237 SKQPQQTETRGRRYGRRPSSKSRRSQTQQ---RRSRSRHRSRSRSRSRSKSQTHTTWSTT 293 Query: 238 RQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRR 143 R + G + A R R+ G+S +T CRR Sbjct: 294 RSRSTSVGKTRA--LTSRSRSRGRSPST-CRR 322
>GLN11_ORYSA (P14656) Glutamine synthetase cytosolic isozyme 1-1 (EC 6.3.1.2)| (OsGLN1;1) (OsGS1;1) (Glutamate--ammonia ligase GLN1;1) (Glutamine synthetase shoot isozyme) Length = 356 Score = 30.4 bits (67), Expect = 1.9 Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 4/108 (3%) Frame = +1 Query: 112 RKTAAK---AKQVASGSPWYGSDR-VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 279 R AAK + +VAS PWYG ++ L P + G FPG G G+ AD Sbjct: 107 RHNAAKIFSSPEVASEEPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCGIGADKS 166 Query: 280 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQI 423 + C +A + G + + + G +V AG Q+ Sbjct: 167 FGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDQV 214
>U2AF2_DROME (Q24562) Splicing factor U2AF 50 kDa subunit (U2 auxiliary factor| 50 kDa subunit) (U2 snRNP auxiliary factor large subunit) Length = 416 Score = 30.4 bits (67), Expect = 1.9 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -3 Query: 226 HRSGSSGAHQKAGRGRAHGQSRTTGCRRQPA--WPLPPFCAW*REPHQKQTMMASSSLP 56 HRS S H++ R R H ++ RR+P+ W +PP P Q + M AS +P Sbjct: 15 HRSRSRDRHRERSRDRRHHRN----SRRKPSLYWDVPPPGFEHITPMQYKAMQASGQIP 69
>GLNA_HEBCY (Q96UV5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 30.4 bits (67), Expect = 1.9 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = +1 Query: 100 RVTMRKTAAKA-KQVASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYG 246 R R AAK +Q PW+G ++ L G P + G FPG G Sbjct: 105 RTNFRHHAAKVMEQAKEDVPWFGLEQEYTLFDADGSPYGWPKGGFPGPQG 154
>STAG2_MOUSE (O35638) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)| Length = 1231 Score = 30.0 bits (66), Expect = 2.5 Identities = 15/52 (28%), Positives = 28/52 (53%) Frame = +1 Query: 277 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQILAR 432 ET +K R+++ I C ++ +L +F E++ NG F + +G + AR Sbjct: 902 ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKEFAR 953
>VE2_HPV37 (Q80903) Regulatory protein E2| Length = 454 Score = 30.0 bits (66), Expect = 2.5 Identities = 21/72 (29%), Positives = 31/72 (43%) Frame = -3 Query: 403 TKQPHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTH 224 T + + + R G R RR R ++ + S P RG RSRG T+ + Sbjct: 272 TSRGKQATSRGGDRRRRRRER---SYSRDTSSSPDRGRGGRSRGGPETRSQSRSLSRSRS 328 Query: 223 RSGSSGAHQKAG 188 RS S G+ + G Sbjct: 329 RSRSRGSSSRGG 340
>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 30.0 bits (66), Expect = 2.5 Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 11/99 (11%) Frame = +1 Query: 139 VASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH- 315 V++ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 316 --CRWA---MLGALGCVFP-----ELLARNGVKFGEAVW 402 C +A + G V P ++ G++ G+ +W Sbjct: 180 RACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLW 218
>VE2_HPV47 (P22420) Regulatory protein E2| Length = 506 Score = 30.0 bits (66), Expect = 2.5 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Frame = -3 Query: 361 TRGR-RSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGR 185 TR R RSR+ + + RGS R R + + RSR+G R G +AG Sbjct: 301 TRARSRSRSTSRSTSTTSRRGGRGSSTRQRSRSPSTYTSKRSREGNTRGRGRGRQGRAGS 360 Query: 184 GRAHGQSR 161 Q R Sbjct: 361 SGGREQRR 368
>G3PA_GUITH (O09452) Glyceraldehyde-3-phosphate dehydrogenase, chloroplast| precursor (EC 1.2.1.59) (NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase) Length = 386 Score = 30.0 bits (66), Expect = 2.5 Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 2/105 (1%) Frame = -1 Query: 411 GLEPNSLTELHAVSGQQLGEDAAERS--KHGPTAVDHLQLAVLGEGLGVSRQPSSVPTVV 238 G+E +T +HA++ Q D++ R + G A + ++ G ++ + V V Sbjct: 215 GIEEGLMTTIHAMTATQAVVDSSSRKDWRGGRAASGN----IIPSSTGAAKAVAKVIPAV 270 Query: 237 ARELTGQVARGLTRKRAEVEHTVRAVPRAAGGNLLGLCRRFAHGD 103 +LTG R T + V+ T R A + +R A+GD Sbjct: 271 KGKLTGMAFRVPTIDVSVVDLTCRLAKDATYEEICAEVKRRANGD 315
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 30.0 bits (66), Expect = 2.5 Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 14/89 (15%) Frame = -3 Query: 370 GPATRGRRSRALQAWPNGSGSPPARGSWRRSR---GQQTTQQCPNRS---RQGTHR---- 221 GP+TRGR+ GS A+ S R S GQ T + P S RQG H Sbjct: 2756 GPSTRGRQ---------GSRHEQAQDSSRHSASQDGQDTIRGHPGSSRGGRQGYHHEHSV 2806 Query: 220 --SGSSGAHQK--AGRGRAHGQSRTTGCR 146 SG SG+H +GR+ +G R Sbjct: 2807 DSSGHSGSHHSHTTSQGRSDASRGQSGSR 2835
>RDRP_NODAV (Q9IMM4) RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (RNA| replicase) (Protein A) Length = 1043 Score = 30.0 bits (66), Expect = 2.5 Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 8/125 (6%) Frame = -3 Query: 358 RGRRSRALQAWPNGSGS----PPA--RGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ 197 R + + QA GSG P A RGS +R +G + + P+R+ S AHQ Sbjct: 916 RANQVTSSQAGAAGSGDASNDPNAHDRGS-QRQQGSASVLRVPDRAAPAGVSSDEQPAHQ 974 Query: 196 KAGRGRAH--GQSRTTGCRRQPAWPLPPFCAW*REPHQKQTMMASSSLPCRQRLGKRAXM 23 A R A G G RR+P P R+ +Q + A +S P +++ R+ Sbjct: 975 TASRSSASRGGAGPGRGGRRRPGPPAKTTAGGARDGNQAR---APTSGPSKRQAEGRSRS 1031 Query: 22 VRXSA 8 R A Sbjct: 1032 SRGPA 1036
>U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit related-protein 2 (U2(RNU2) small nuclear RNA auxillary factor 1-like 2) (NY-REN-20 antigen) Length = 482 Score = 30.0 bits (66), Expect = 2.5 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = -3 Query: 388 RTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTH-RSGS 212 ++SR G + R S++ + + S S RSRG+ + + +RSR+ RS S Sbjct: 398 KSSRHRGKKSHKRTSKSRERHNSRSRGRNRDRSRDRSRGRGSRSRSRSRSRRSRRSRSQS 457 Query: 211 SGAHQKAGRGRAHGQSRT 158 S + GR R+ + RT Sbjct: 458 SSRSRSRGRRRSGNRDRT 475
>LNT_RHOBA (Q7UGJ8) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP| N-acyltransferase) Length = 571 Score = 29.6 bits (65), Expect = 3.2 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +1 Query: 313 HCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQILAR 432 H R A L A+GC P L A NG G VW + +++ R Sbjct: 476 HLRCAQLVAVGCRRPILSAANG---GPTVWIDSAGRVVER 512
>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)| Length = 633 Score = 29.6 bits (65), Expect = 3.2 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 11/83 (13%) Frame = -3 Query: 355 GRRSRALQAWPNGSGSPPARGSWRRS---------RGQQTTQQCPNRSRQGTHRSGSSG- 206 GR R P G G+PP RG S RG + + P + ++G GS G Sbjct: 505 GRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGGPAQQQRGRGSRGSRGN 564 Query: 205 -AHQKAGRGRAHGQSRTTGCRRQ 140 G+ +A G ++ RRQ Sbjct: 565 RGGNVGGKRKADGYNQPDSKRRQ 587
>RS9_HAEIN (P44388) 30S ribosomal protein S9| Length = 129 Score = 29.6 bits (65), Expect = 3.2 Identities = 24/91 (26%), Positives = 35/91 (38%) Frame = -1 Query: 417 GSGLEPNSLTELHAVSGQQLGEDAAERSKHGPTAVDHLQLAVLGEGLGVSRQPSSVPTVV 238 GSG + EL G++ + D L L + +G G+S Q Sbjct: 23 GSGKITINQRELDVYFGRETARMVVRQPLELVXLTDKLDLYITVKGGGISGQ-------- 74 Query: 237 ARELTGQVARGLTRKRAEVEHTVRAVPRAAG 145 G + G+TR E + T+R RAAG Sbjct: 75 ----AGAIRHGITRALMEYDETLRPALRAAG 101
>EPHB3_XENLA (Q91735) Ephrin type-B receptor 3 precursor (EC 2.7.10.1)| (Tyrosine-protein kinase receptor TCK) Length = 974 Score = 29.6 bits (65), Expect = 3.2 Identities = 17/57 (29%), Positives = 28/57 (49%) Frame = -3 Query: 298 RGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPAWP 128 RG+++ +G+ + CP SR S ++ + G RA G+S T C P+ P Sbjct: 268 RGTYKSKQGEGSCMPCPANSR--AISSAATICSCQNGYYRADGESAETACTSVPSAP 322
>CCAR1_HUMAN (Q8IX12) Cell division cycle and apoptosis regulator protein 1| (Cell cycle and apoptosis regulatory protein 1) (CARP-1) (Death inducer with SAP domain) Length = 1150 Score = 29.6 bits (65), Expect = 3.2 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 3/98 (3%) Frame = -3 Query: 427 LRSGIRP*TKQPHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCP 248 L++ +P +QP + + P R Q P PP+R S R RG Q + Sbjct: 261 LQTQPQPLLQQPQQKAGLLQPPVR----IVSQPQPARRLDPPSRFSGRNDRGDQVPNRKD 316 Query: 247 NRSRQ---GTHRSGSSGAHQKAGRGRAHGQSRTTGCRR 143 +RSR+ RS +K R R+ + R RR Sbjct: 317 DRSRERERERRRSRERSPQRKRSRERSPRRERERSPRR 354
>GLNA_SQUAC (P41320) Glutamine synthetase, mitochondrial precursor (EC 6.3.1.2)| (Glutamate--ammonia ligase) Length = 403 Score = 29.6 bits (65), Expect = 3.2 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 11/99 (11%) Frame = +1 Query: 139 VASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH- 315 +A+ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 153 IANEYPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADK---AYGRDIVEAHY 209 Query: 316 --CRWAMLGALGCVFPELLAR--------NGVKFGEAVW 402 C +A + G + A+ G++ G+ +W Sbjct: 210 RACLYAGIELSGTNAEVMAAQWEYQVGPCEGIQMGDHLW 248
>CCAR1_MOUSE (Q8CH18) Cell division cycle and apoptosis regulator protein 1| (Cell cycle and apoptosis regulatory protein 1) (CARP-1) Length = 1146 Score = 29.6 bits (65), Expect = 3.2 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 3/98 (3%) Frame = -3 Query: 427 LRSGIRP*TKQPHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCP 248 L++ +P +QP + + P R Q P PP+R S R RG Q + Sbjct: 258 LQTQPQPLLQQPQQKAGLLQPPVR----IVSQPQPARRLDPPSRFSGRNDRGDQVPNRKD 313 Query: 247 NRSRQ---GTHRSGSSGAHQKAGRGRAHGQSRTTGCRR 143 +RSR+ RS +K R R+ + R RR Sbjct: 314 DRSRERDRERRRSRERSPQRKRSRERSPRRERERSPRR 351
>GLNA_CHICK (P16580) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 29.3 bits (64), Expect = 4.2 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Frame = +1 Query: 97 ARVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 273 A +R T + + S PW+G ++ L G P + + FPG G G+ AD Sbjct: 109 ADTNLRHTCRRIMDMVSNQHPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGAD 168 Query: 274 PETFAKNRELEVIHCR 321 A R++ H R Sbjct: 169 K---AYGRDIVEAHYR 181
>CACB2_BOVIN (Q9MZL5) Voltage-dependent L-type calcium channel beta-2 subunit| (CAB2) (Calcium channel, voltage-dependent, beta 2 subunit) Length = 603 Score = 29.3 bits (64), Expect = 4.2 Identities = 14/53 (26%), Positives = 23/53 (43%) Frame = -3 Query: 298 RGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQ 140 RG+ RS Q + CP ++ HRS + + ++G R + T Q Sbjct: 451 RGAPGRSASQAEEEHCPEPVKKAQHRSSTQHHNHRSGTSRGLSRQETLDSETQ 503
>GLNA_AMAMU (Q8X169) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 29.3 bits (64), Expect = 4.2 Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = +1 Query: 100 RVTMRKTAAKAKQVASGS-PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYG 246 R R AK ++A PW+G ++ L G P + G FPG G Sbjct: 105 RTNHRHHTAKVMELAKDEIPWFGIEQEYTLFDADGSPYGWPKGGFPGPQG 154
>AROE_HALSA (Q9HS68) Shikimate dehydrogenase (EC 1.1.1.25)| Length = 266 Score = 29.3 bits (64), Expect = 4.2 Identities = 34/114 (29%), Positives = 47/114 (41%), Gaps = 4/114 (3%) Frame = -1 Query: 420 LGSGLEPNSLTELHAVSGQQLGEDAAERSKHGPTAVDHLQLAVLGEG-LGVSRQPSSVPT 244 +G L P LHA + + G DA R A D A+ G G LGV+ + P Sbjct: 11 VGHSLSP----PLHAAAYDECGLDA--RYVTFEPAPDDAAAAIRGAGALGVAGLNVTAP- 63 Query: 243 VVARELTGQVARGLTRKRAEVEHTVR---AVPRAAGGNLLGLCRRFAHGDASLT 91 + VA R +T+ A PR ++ G+ R FAH D SL+ Sbjct: 64 -FKQSAASAVATDSMAARVGAVNTIDFSGAAPRGYNTDVAGVKRAFAHHDVSLS 116
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 29.3 bits (64), Expect = 4.2 Identities = 29/102 (28%), Positives = 33/102 (32%), Gaps = 24/102 (23%) Frame = -3 Query: 370 GPATRGRRSRALQAWPNGSGSPPARGS--------WRRS---------------RGQQTT 260 G A GRR R GSG PP R WRR RG + Sbjct: 1589 GAAAAGRRDRPGGGGGWGSGPPPCRRCGHRCWLCWWRRGPRPRRRPGLTDRVPPRGGPSP 1648 Query: 259 QQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCR-RQP 137 + C R G G G + G G R CR R+P Sbjct: 1649 RGCRGAGRAGGGGRGGCGGGRAPGAAGGPGLCRCECCRGRRP 1690
>SFRS6_HUMAN (Q13247) Splicing factor, arginine/serine-rich 6 (Pre-mRNA-splicing| factor SRP55) Length = 344 Score = 29.3 bits (64), Expect = 4.2 Identities = 28/109 (25%), Positives = 44/109 (40%) Frame = -3 Query: 388 RTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSS 209 R+ R ++GR+SR+ + S RGS SR + + +RSR + + Sbjct: 229 RSKGRSRSRSKGRKSRS----KSKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKEN 284 Query: 208 GAHQKAGRGRAHGQSRTTGCRRQPAWPLPPFCAW*REPHQKQTMMASSS 62 G + R+ QSR+ P+PP A P K+ S S Sbjct: 285 GKGDIKSKSRSRSQSRSNS-----PLPVPPSKARSVSPPPKRATSRSRS 328
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 29.3 bits (64), Expect = 4.2 Identities = 35/94 (37%), Positives = 41/94 (43%), Gaps = 6/94 (6%) Frame = +1 Query: 103 VTMRKTAAKAKQVASGSPWYGSDRVL----YLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 270 V+ KT + K V S S S RV YL L G +G F G WD L+A Sbjct: 28 VSGSKTVSGGKTVGSASA--ESRRVAEVQAYLATLPG--CGVESGPFKGV--WDPLSLAA 81 Query: 271 DPET--FAKNRELEVIHCRWAMLGALGCVFPELL 366 + RE E+ H R AML ALG V E L Sbjct: 82 TATVGDVRRWRESEITHGRVAMLAALGFVVGEQL 115
>GUN1_RALSO (P58599) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) Length = 424 Score = 29.3 bits (64), Expect = 4.2 Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = +1 Query: 124 AKAKQVASGSP---WYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 294 AK QVA G+ W G V G GE G PG YG + SAD T+ KN Sbjct: 103 AKVCQVAQGTGTLLWRG---VSLAGAEFGE------GSLPGTYGSNYIYPSADSATYYKN 153 Query: 295 RELEVIHC--RWAML 333 + + ++ RW L Sbjct: 154 KGMNLVRLPFRWERL 168
>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic| nucleotide-gated channel 2 (Brain cyclic nucleotide gated channel 2) (BCNG-2) Length = 889 Score = 29.3 bits (64), Expect = 4.2 Identities = 21/49 (42%), Positives = 26/49 (53%) Frame = -2 Query: 239 SPGNSPVR*LGGSPESGPR*STRSEPYHGLPEATCLAFAAVLRMVTRAS 93 SPG P G+P S PR + R+ PY GLP A A R ++RAS Sbjct: 771 SPGPPPPASPPGAPAS-PR-APRTSPYGGLPAAPLAGPALPARRLSRAS 817
>EFG1_CANAL (P43064) Enhanced filamentous growth protein| Length = 552 Score = 29.3 bits (64), Expect = 4.2 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%) Frame = -3 Query: 280 SRGQQTTQQCPNR--SRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQP------AWPL 125 S+G Q PN+ Q H +GS+ + A G + T+G +QP A P+ Sbjct: 109 SQGNYYQQTIPNQLSQPQPQHYNGSNRNYTSAPSGAPIPSNSTSGPSQQPPLPGQQAVPI 168 Query: 124 PPFCAW*REPHQKQTMMASSS 62 PP + ++P Q + +SS Sbjct: 169 PPHVSTMQQPTPVQDTLNASS 189
>RK22_CHLRE (Q84U21) 50S ribosomal protein L22, chloroplast precursor| Length = 175 Score = 28.9 bits (63), Expect = 5.5 Identities = 15/40 (37%), Positives = 19/40 (47%) Frame = +2 Query: 95 RLASPCAKRRQRPSRLPPAARGTALTVCSTSARFLVSPRA 214 R P RP+R+ P AR TA VCS + +P A Sbjct: 17 RSVQPFRPAAVRPARIAPVARKTATVVCSAATDAPAAPVA 56
>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)| (Translocated in liposarcoma protein) (POMp75) (75 kDa DNA-pairing protein) Length = 526 Score = 28.9 bits (63), Expect = 5.5 Identities = 21/80 (26%), Positives = 34/80 (42%) Frame = -3 Query: 394 PHRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSG 215 P TS +G +++ S Q P+ G ++S GQQ + P Q + Sbjct: 106 PSSTSGSYGSSSQS--SSYGQPQSGSYSQQPSYGGQQQSYGQQQSYNPPQGYGQQNQYNS 163 Query: 214 SSGAHQKAGRGRAHGQSRTT 155 SSG G G +GQ +++ Sbjct: 164 SSGGGGGGGGGGNYGQDQSS 183 Score = 28.5 bits (62), Expect = 7.2 Identities = 17/68 (25%), Positives = 32/68 (47%) Frame = -3 Query: 334 QAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTT 155 Q+ P G GS GS + S+ Q Q S +SG++ + + ++GQ ++ Sbjct: 69 QSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSG 128 Query: 154 GCRRQPAW 131 +QP++ Sbjct: 129 SYSQQPSY 136
>PRIO_SAISC (P40258) Major prion protein precursor (PrP) (PrP27-30) (PrP33-35C)| (CD230 antigen) Length = 260 Score = 28.9 bits (63), Expect = 5.5 Identities = 20/71 (28%), Positives = 24/71 (33%) Frame = -3 Query: 334 QAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTT 155 Q P G+ PP G W + G Q P+ G G G G G+ HG Sbjct: 41 QGSPGGNRYPPQGGGWGQPHGGGWGQ--PHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQ 98 Query: 154 GCRRQPAWPLP 122 G W P Sbjct: 99 GGGTHNQWNKP 109
>ADF1_CANAL (P46589) Adherence factor (Adhesion and aggregation mediating| surface antigen) Length = 612 Score = 28.9 bits (63), Expect = 5.5 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = -3 Query: 268 QTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPA 134 Q TQ NRSR T S G+ Q +G G R+TG ++Q A Sbjct: 197 QATQPRSNRSRSQTSFSKPRGSRQVSGSG------RSTGAKKQSA 235
>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)| Length = 1425 Score = 28.9 bits (63), Expect = 5.5 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Frame = -2 Query: 413 PALNQTASPNFTPFRASNSGKTQPSAPSMAQRQWITSSSRFLAKVSGSADNPAVSQP*SP 234 P Q +P +S + + QP+ P A T++ R L + S +N + SP Sbjct: 233 PLPQQPPAPANQDQNSSQNARLQPTPPIQAPAPKPTAAPRPLDRESPGVENKLIPPVGSP 292 Query: 233 GNS-PVR*LGGSPESGP 186 G+S P+ G P S P Sbjct: 293 GSSTPLPPDGTGPNSTP 309
>RS9_HAESO (P31782) 30S ribosomal protein S9| Length = 129 Score = 28.9 bits (63), Expect = 5.5 Identities = 25/91 (27%), Positives = 35/91 (38%) Frame = -1 Query: 417 GSGLEPNSLTELHAVSGQQLGEDAAERSKHGPTAVDHLQLAVLGEGLGVSRQPSSVPTVV 238 GSG + EL G++ + D L L V +G G+S Q Sbjct: 23 GSGKIVINQRELDVYFGRETSRMIVRQPLELVELTDKLDLYVTVKGGGISGQ-------- 74 Query: 237 ARELTGQVARGLTRKRAEVEHTVRAVPRAAG 145 G + G+TR E + T+R RAAG Sbjct: 75 ----AGAIRHGITRALIEYDETLRPALRAAG 101
>PKD2_MOUSE (O35245) Polycystin-2| Length = 966 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/69 (27%), Positives = 29/69 (42%) Frame = +1 Query: 4 EWRXNAPCXLSSQAFAGKAVKNLPSSSVFGEARVTMRKTAAKAKQVASGSPWYGSDRVLY 183 EWR + SS A + + S G A ++ R+ + + SP G D + Sbjct: 115 EWRPGSRRSASSSAVSSVGARGRGLGSYRGAAHLSGRRRRLEDQGAQCPSPAGGGDPLHR 174 Query: 184 LGPLSGEPP 210 PL G+PP Sbjct: 175 HLPLEGQPP 183
>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 221 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -3 Query: 313 GSPPAR----GSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCR 146 G PP R G RRSR + ++ +RSR + S + R R +SR+T Sbjct: 104 GPPPRRYGSSGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKS 163 Query: 145 R 143 R Sbjct: 164 R 164
>ARP8_SCHPO (Q9US07) Probable actin-related protein 8| Length = 620 Score = 28.9 bits (63), Expect = 5.5 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = -1 Query: 387 ELHAVSGQQLGEDAAERSKHGPTAVDHLQLAVLGEGLGVSRQPSSVPTVVARELTGQVAR 208 E + +LGE+ K T V H+ L GL ++ P++VP V+AR++ A+ Sbjct: 38 EEDGIEESELGEE-----KDNKTIVLHIGSQNLRIGLASNKTPTTVPMVIARKMRAPFAQ 92
>PACC_CEPAC (Q96X49) pH-response transcription factor pacC/RIM101| Length = 621 Score = 28.9 bits (63), Expect = 5.5 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%) Frame = -2 Query: 410 ALNQTASPNFTPFRAS---NSGKT-QPSAPSMAQRQWITSSSRFLAKVSGSADNPAVSQP 243 A++ T +P TP ++ SG + PSAP+M+ + +S+S + S PAVSQ Sbjct: 399 AMSSTGTPAVTPPSSAVSYTSGHSPSPSAPAMSPQSRHSSTSGSVMYPSLPTSLPAVSQ- 457 Query: 242 *SPGNSPVR*LGGSPESGPR 183 G S LG S ES R Sbjct: 458 -GFGQSTTTTLGPSFESNER 476
>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -3 Query: 313 GSPPAR----GSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCR 146 G PP R G RRSR + ++ +RSR + S + R R +SR+T Sbjct: 103 GPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKS 162 Query: 145 R 143 R Sbjct: 163 R 163
>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -3 Query: 313 GSPPAR----GSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCR 146 G PP R G RRSR + ++ +RSR + S + R R +SR+T Sbjct: 103 GPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKS 162 Query: 145 R 143 R Sbjct: 163 R 163
>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) (Putative myelin regulatory factor 1) (MRF-1) Length = 220 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -3 Query: 313 GSPPAR----GSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCR 146 G PP R G RRSR + ++ +RSR + S + R R +SR+T Sbjct: 103 GPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKS 162 Query: 145 R 143 R Sbjct: 163 R 163
>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 220 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -3 Query: 313 GSPPAR----GSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCR 146 G PP R G RRSR + ++ +RSR + S + R R +SR+T Sbjct: 103 GPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKS 162 Query: 145 R 143 R Sbjct: 163 R 163
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 28.9 bits (63), Expect = 5.5 Identities = 19/70 (27%), Positives = 27/70 (38%) Frame = -3 Query: 355 GRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRA 176 G R A A P G PP ++G + + + G GAH AG Sbjct: 703 GERGEAGPAGPTGFAGPPGAAGHTGAKGDRGAKGPKGEAGS----PGPLGAHGSAGPAGP 758 Query: 175 HGQSRTTGCR 146 +G + +TG R Sbjct: 759 NGPAGSTGAR 768
>ARI1A_HUMAN (O14497) AT-rich interactive domain-containing protein 1A (ARID| domain-containing protein 1A) (SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin subfamily F member 1) (SWI-SNF complex protein p270) (B120) (SWI-like pr Length = 2285 Score = 28.9 bits (63), Expect = 5.5 Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 7/120 (5%) Frame = -3 Query: 382 SRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQT------TQQCPNRSRQGTHR 221 S++ GP + ++ P GS +P + R Q TQQ P +QG Sbjct: 402 SQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSG 461 Query: 220 SGSSGAHQKAGRGRAHGQSRTTGCRRQPAWPLP-PFCAW*REPHQKQTMMASSSLPCRQR 44 G G + H Q + +QP P ++ ++P + + SS P Q+ Sbjct: 462 YGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQ 521
>GPC4_MOUSE (P51655) Glypican-4 precursor (K-glypican)| Length = 557 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = -2 Query: 179 STRSEPYHGLPEATCLAFAAVLRMVTRASPKTDDDGKFFTALPA 48 S R PYH T A ++ R+VT K KF+++LP+ Sbjct: 362 SARFRPYHPEQRPTTAAGTSLDRLVTDVKEKLKQAKKFWSSLPS 405
>GDF7_CERAE (Q9BDW8) Growth/differentiation factor 7 precursor (GDF-7)| Length = 447 Score = 28.5 bits (62), Expect = 7.2 Identities = 20/61 (32%), Positives = 27/61 (44%) Frame = -3 Query: 319 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQ 140 G+GSP A + RR R + GT + SG G GR HG+ + C R+ Sbjct: 303 GTGSPRAVTAGRRRR---------RTALAGTRTAQGSGG----GAGRGHGRRGRSRCSRK 349 Query: 139 P 137 P Sbjct: 350 P 350
>MUC1_MOUSE (Q02496) Mucin-1 precursor (Polymorphic epithelial mucin) (PEMT)| (Episialin) Length = 630 Score = 28.5 bits (62), Expect = 7.2 Identities = 36/136 (26%), Positives = 50/136 (36%), Gaps = 1/136 (0%) Frame = -2 Query: 410 ALNQTASPNFTPFRASNSGKTQPSAPSMAQRQWITSSSRFLAKVSGSADNPAVSQP*SPG 231 A T+SP +P + SNS S S A S+ V G +PA S P Sbjct: 109 AHGDTSSPATSPLKDSNSSPVVHSGTSSAATTAPVDSTS-SPVVHGGTSSPATSPPGDST 167 Query: 230 NSPVR*LGGSPES-GPR*STRSEPYHGLPEATCLAFAAVLRMVTRASPKTDDDGKFFTAL 54 +SP SP + P ST + G A + + +SP DD T+ Sbjct: 168 SSPDHSSTSSPATRAPEDSTSTAVLSGTSSP-----ATTAPVDSTSSPVAHDD----TSS 218 Query: 53 PAKAWEESXHGAXQRH 6 PA + E + H Sbjct: 219 PATSLSEDSASSPVAH 234
>TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TRIP12)| Length = 1992 Score = 28.5 bits (62), Expect = 7.2 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Frame = -3 Query: 316 SGSPPAR-GSWRRSRGQQTTQQCPNRSRQGT 227 S SPPA S RRS Q+TT C + SR+G+ Sbjct: 310 SESPPAELPSLRRSTRQKTTGSCASTSRRGS 340
>CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22| Length = 881 Score = 28.5 bits (62), Expect = 7.2 Identities = 28/108 (25%), Positives = 42/108 (38%) Frame = -3 Query: 352 RRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAH 173 RR R+ + S +PP R R+RG++ + Q + R+ RS S R R Sbjct: 766 RRDRSYSRSLSRSVTPPLRAVDARARGRRYSSQSLSPPRRRAERSVSPQRPPPGRRPRGD 825 Query: 172 GQSRTTGCRRQPAWPLPPFCAW*REPHQKQTMMASSSLPCRQRLGKRA 29 SR+ P P + R + AS S P R +R+ Sbjct: 826 SLSRSPS-------PPPRYAREQRRRRNSSSASASRSPPHRDSNRRRS 866
>TKT1_RHIME (P58333) Transketolase (EC 2.2.1.1) (TK)| Length = 694 Score = 28.5 bits (62), Expect = 7.2 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = -3 Query: 244 RSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPAWPLPPF 116 R+R G + G+H+ G A G+ R + WP PPF Sbjct: 251 RTRIGKGAASMEGSHKT--HGAALGEKEIAATREKLGWPHPPF 291
>TTC16_MACFA (Q95LZ5) Tetratricopeptide repeat protein 16 (TPR repeat protein| 16) Length = 872 Score = 28.5 bits (62), Expect = 7.2 Identities = 18/81 (22%), Positives = 37/81 (45%) Frame = -3 Query: 298 RGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPAWPLPP 119 R S +++ Q+ +Q ++++ HR SS G+GR ++ T +RQ + + Sbjct: 691 RQSLSKTQATQSQRQNFSKTKAAAHRRNSSKTKATQGQGRRSSKTEATQGQRQSSSEIET 750 Query: 118 FCAW*REPHQKQTMMASSSLP 56 +EP + +T + P Sbjct: 751 SQGPRQEPSKTKTTRSPRQRP 771
>SPT5H_DROME (Q9V460) Transcription elongation factor SPT5 (dSpt5) (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) Length = 1078 Score = 28.5 bits (62), Expect = 7.2 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = -3 Query: 280 SRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRA 176 SRG ++ + +RS+ G RSGS ++ RG++ Sbjct: 39 SRGSRSVSRSRSRSQSGHSRSGSESPQRRDNRGKS 73
>RHO_MYCTU (P66028) Transcription termination factor rho (EC 3.6.1.-)| (ATP-dependent helicase rho) Length = 602 Score = 28.5 bits (62), Expect = 7.2 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = -3 Query: 352 RRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGR 179 RRS +A P+GSG + + +Q QQ +GT G G Q+A G+ Sbjct: 124 RRSATREAGPSGSGERAGTAA-DDTDNRQGGQQDAKTEERGTDAGGDQGGDQQASGGQ 180
>RHO_MYCBO (P66029) Transcription termination factor rho (EC 3.6.1.-)| (ATP-dependent helicase rho) Length = 602 Score = 28.5 bits (62), Expect = 7.2 Identities = 18/58 (31%), Positives = 26/58 (44%) Frame = -3 Query: 352 RRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGR 179 RRS +A P+GSG + + +Q QQ +GT G G Q+A G+ Sbjct: 124 RRSATREAGPSGSGERAGTAA-DDTDNRQGGQQDAKTEERGTDAGGDQGGDQQASGGQ 180
>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) Length = 172 Score = 28.5 bits (62), Expect = 7.2 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = -3 Query: 286 RRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ--KAGRGRAHGQSRTTGCR 146 R+ R Q + NRSR +R GS+G + GRGR G SR G R Sbjct: 75 RQIRVDQAGKSSDNRSRG--YRGGSAGGRGFFRGGRGRGRGFSRGGGDR 121
>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 28.5 bits (62), Expect = 7.2 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = -3 Query: 286 RRSRGQQTTQQCPNRSRQGTHRSGSSGAHQ--KAGRGRAHGQSRTTGCR 146 R+ R Q + NRSR +R GS+G + GRGR G SR G R Sbjct: 75 RQIRVDQAGKSSDNRSRG--YRGGSAGGRGFFRGGRGRGRGFSRGGGDR 121
>GLNA1_DROME (P20477) Glutamine synthetase 1, mitochondrial precursor (EC| 6.3.1.2) (Glutamate--ammonia ligase 1) Length = 399 Score = 28.5 bits (62), Expect = 7.2 Identities = 17/69 (24%), Positives = 28/69 (40%) Frame = +1 Query: 139 VASGSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 318 ++ PW+G ++ L + G P + FP G G+ AD E V+ C Sbjct: 161 ISDQEPWFGIEQEYTLLDVDGRPFGWPENGFPAPQGPYYCGVGADRVYARDLVEAHVVAC 220 Query: 319 RWAMLGALG 345 +A + G Sbjct: 221 LYAGIDFAG 229
>FTSK1_RALSO (Q8XRH0) DNA translocase ftsK 1| Length = 959 Score = 28.5 bits (62), Expect = 7.2 Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 5/38 (13%) Frame = -3 Query: 217 GSSGAHQKAGRGRAHGQSRTTGCR-----RQPAWPLPP 119 G GA Q G G A G SR G RQPAW PP Sbjct: 142 GLGGAEQAMGSGHA-GASRRHGIEAGSAWRQPAWQPPP 178
>RBP2_HUMAN (P49792) Ran-binding protein 2 (RanBP2) (Nuclear pore complex protein| Nup358) (Nucleoporin Nup358) (358 kDa nucleoporin) (P270) Length = 3224 Score = 28.1 bits (61), Expect = 9.4 Identities = 18/64 (28%), Positives = 25/64 (39%) Frame = -3 Query: 313 GSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSRTTGCRRQPA 134 GS + S R T P +S GT ++ + + G AHG G +P Sbjct: 1116 GSSQQKNSGFRRSDDMFTFHGPGKSVFGTPTLETANKNHETDGGSAHGDDDDDGPHFEPV 1175 Query: 133 WPLP 122 PLP Sbjct: 1176 VPLP 1179
>HSP1_PERGU (P42147) Sperm protamine P1| Length = 68 Score = 28.1 bits (61), Expect = 9.4 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = -3 Query: 298 RGSWRRSRGQ-QTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHG--QSRTTGCRRQ 140 R S RSR + + ++ +R R R G S ++ G+GRAH + R +G RR+ Sbjct: 4 RNSRSRSRSRFRRRRRGRSRVRGRDARQGRSSRRRRRGKGRAHSGKKGRRSGSRRR 59
>AGO2_DROME (Q9VUQ5) Argonaute 2 protein| Length = 1214 Score = 28.1 bits (61), Expect = 9.4 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 10/87 (11%) Frame = -3 Query: 400 KQPHRT---SRRFGPATR--GRRSRALQAWPNGSGSPPARGSW--RRSRGQQTTQQCPNR 242 +QPH+ S R P+T G R+ Q S A G W ++ +G+Q Q + Sbjct: 58 QQPHQQQQQSSRQQPSTSSGGSRASGFQQGGQQQKSQDAEG-WTAQKKQGKQQVQGWTKQ 116 Query: 241 SRQGTHR---SGSSGAHQKAGRGRAHG 170 +QG H+ G G +Q+ G+ G Sbjct: 117 GQQGGHQQGRQGQDGGYQQRPPGQQQG 143
>GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW212 precursor| Length = 838 Score = 28.1 bits (61), Expect = 9.4 Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 6/101 (5%) Frame = -3 Query: 400 KQPHRTSRRFGPATRGRRSRAL----QAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQ 233 +QP + + PA +G++ + L Q G G PA+G + GQ Q P + +Q Sbjct: 579 QQPAQVQQGQQPA-QGQQGQQLGQGQQGQQPGQGQQPAQGQQGQQPGQGQQGQQPGQGQQ 637 Query: 232 GTHRSG--SSGAHQKAGRGRAHGQSRTTGCRRQPAWPLPPF 116 + Q++G+G+ GQ + G +QP P + Sbjct: 638 PGQGQPWYYPTSPQESGQGQQPGQWQQPGQWQQPGQGQPGY 678
>CEAK_ECOLI (Q47502) Colicin-K| Length = 548 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/55 (30%), Positives = 21/55 (38%), Gaps = 1/55 (1%) Frame = -3 Query: 316 SGSPPARGSWRRSRGQQTTQQCPNR-SRQGTHRSGSSGAHQKAGRGRAHGQSRTT 155 SG P G G QQ N S G H G SG G+G ++ T+ Sbjct: 6 SGYGPTAGESMGGTGANLNQQGGNNNSNSGVHWGGGSGHGNNGGQGNSNSSGSTS 60
>VE2_HPV12 (P36782) Regulatory protein E2| Length = 494 Score = 28.1 bits (61), Expect = 9.4 Identities = 20/68 (29%), Positives = 32/68 (47%) Frame = -3 Query: 358 RGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGR 179 R RRSR+ G GS + RR R + ++ RS++G G ++ GRG+ Sbjct: 301 RNRRSRSQSRGRGGRGSSTDTTTKRR-RSRSSSSNTRKRSQRGERGRG-----ERGGRGK 354 Query: 178 AHGQSRTT 155 +S +T Sbjct: 355 RRDRSSST 362
>SFRS7_HUMAN (Q16629) Splicing factor, arginine/serine-rich 7 (Splicing factor| 9G8) Length = 238 Score = 28.1 bits (61), Expect = 9.4 Identities = 23/74 (31%), Positives = 33/74 (44%) Frame = -3 Query: 391 HRTSRRFGPATRGRRSRALQAWPNGSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGS 212 HR SRR RRSR+ + S S RSRG+++ P RSR + R Sbjct: 120 HRYSRR-------RRSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSR 172 Query: 211 SGAHQKAGRGRAHG 170 S + +++ G G Sbjct: 173 SASLRRSRSGSIKG 186
>IF2_ENTFC (P18311) Translation initiation factor IF-2| Length = 784 Score = 28.1 bits (61), Expect = 9.4 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Frame = -3 Query: 322 NGSGSPPARGSWRRSRGQ--QTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQSR 161 NG G+ R +S Q Q + Q N++RQG+++ G+ + RG+ + +R Sbjct: 116 NGGGNNQNRQGATQSGNQNRQGSTQGGNQNRQGSNQGGNQNRNNNNNRGKFNNNNR 171
>SRR55_DROME (P26686) Serine-arginine protein 55 (SRP55) (Protein enhancer of| deformed) (52-kDa bracketing protein) (B52 protein) Length = 375 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = -3 Query: 319 GSGSPPARGSWRRSRGQQTTQQCPNRSRQGTHRSGSSGAHQKAGRGRAHGQS 164 GSG +R S RSR + + +RSR+ +H S + K+ GR+ +S Sbjct: 201 GSGRGRSRSSSSRSRSRSRRR---SRSRRSSHSRSKSRSRSKSRGGRSKSKS 249
>FOXQ1_RAT (Q63244) Forkhead box protein Q1 (Hepatocyte nuclear factor 3| forkhead homolog 1) (HNF-3/forkhead-like protein 1) (HFH-1) (Fragment) Length = 392 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = +2 Query: 35 LPKPLPARQ*RTCHHRLFLVRLASPCAKRRQRPSRLPPAARGTALTVCSTSA 190 L KP +R+ T + L A+PC R P+ LP ++ G L +C+ A Sbjct: 266 LSKPFRSRRDGTXALGVQLPWSAAPCPPLRAYPALLPASSGGALLPLCAYGA 317 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.134 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,935,081 Number of Sequences: 219361 Number of extensions: 1620484 Number of successful extensions: 6427 Number of sequences better than 10.0: 184 Number of HSP's better than 10.0 without gapping: 5856 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6342 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
