ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd20o02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1215 bits (613), Expect = 0.0 Identities = 613/613 (100%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119516 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 119457 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119456 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 119397 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119396 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 119337 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119336 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 119277 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119276 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 119217 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119216 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 119157 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119156 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 119097 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119096 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 119037 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119036 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 118977 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118976 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 118917 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 118916 ttgcgctgaagat 118904 Score = 1215 bits (613), Expect = 0.0 Identities = 613/613 (100%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95378 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 95437 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95438 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 95497 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95498 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 95557 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95558 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 95617 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95618 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 95677 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95678 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 95737 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95738 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 95797 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95798 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 95857 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95858 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 95917 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95918 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 95977 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 95978 ttgcgctgaagat 95990
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118297 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 118238 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 118237 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 118178 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118177 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 118118 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118117 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 118058 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118057 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 117998 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117997 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 117938 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117937 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 117878 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117877 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 117818 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117817 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 117758 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117757 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 117698 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 117697 ttgcgctgaagat 117685
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119381 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 119322 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 119321 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 119262 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119261 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 119202 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119201 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 119142 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119141 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 119082 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119081 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 119022 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119021 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 118962 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118961 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 118902 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118901 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 118842 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118841 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 118782 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 118781 ttgcgctgaagat 118769 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95775 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 95834 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95835 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 95894 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95895 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 95954 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95955 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 96014 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96015 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 96074 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96075 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 96134 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96135 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 96194 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96195 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 96254 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96255 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 96314 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96315 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 96374 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 96375 ttgcgctgaagat 96387
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119381 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 119322 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 119321 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 119262 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119261 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 119202 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119201 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 119142 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119141 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 119082 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119081 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 119022 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119021 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 118962 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118961 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 118902 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118901 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 118842 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118841 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 118782 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 118781 ttgcgctgaagat 118769 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95775 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 95834 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95835 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 95894 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95895 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 95954 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95955 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 96014 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96015 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 96074 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96075 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 96134 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96135 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 96194 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96195 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 96254 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96255 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 96314 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96315 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 96374 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 96375 ttgcgctgaagat 96387
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119330 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 119271 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 119270 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 119211 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119210 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 119151 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119150 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 119091 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119090 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 119031 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119030 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 118971 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118970 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 118911 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118910 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 118851 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118850 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 118791 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118790 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 118731 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 118730 ttgcgctgaagat 118718 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95720 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 95779 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95780 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 95839 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95840 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 95899 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95900 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 95959 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95960 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 96019 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96020 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 96079 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96080 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 96139 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96140 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 96199 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96200 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 96259 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96260 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 96319 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 96320 ttgcgctgaagat 96332
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508353 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 31508412 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 31508413 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 31508472 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508473 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 31508532 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508533 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 31508592 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508593 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 31508652 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508653 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 31508712 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508713 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 31508772 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508773 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 31508832 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508833 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 31508892 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508893 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 31508952 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 31508953 ttgcgctgaagat 31508965 Score = 359 bits (181), Expect = 7e-96 Identities = 181/181 (100%) Strand = Plus / Minus Query: 433 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 493 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 553 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 613 t 613 | Sbjct: 11513137 t 11513137 Score = 157 bits (79), Expect = 5e-35 Identities = 79/79 (100%) Strand = Plus / Minus Query: 535 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 595 gcgcccttgcgctgaagat 613 ||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagat 27320585 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 449 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 508 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 509 taaaggaggtggggg 523 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 452 gtcgagagggaaacagcccggatcaccagctaaggccc 489 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 351 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 405 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84243 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 84184 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 84183 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 84124 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84123 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 84064 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84063 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 84004 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84003 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 83944 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83943 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 83884 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83883 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 83824 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83823 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 83764 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83763 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 83704 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83703 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 83644 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 83643 ttgcgctgaagat 83631
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119350 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 119291 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 119290 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 119231 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119230 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 119171 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119170 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 119111 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119110 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 119051 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119050 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 118991 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118990 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 118931 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118930 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 118871 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118870 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 118811 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118810 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 118751 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 118750 ttgcgctgaagat 118738 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95768 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 95827 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95828 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 95887 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95888 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 95947 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95948 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 96007 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96008 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 96067 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96068 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 96127 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96128 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 96187 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96188 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 96247 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96248 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 96307 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96308 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 96367 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 96368 ttgcgctgaagat 96380
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14542 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 14601 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 14602 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 14661 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14662 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 14721 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14722 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 14781 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14782 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 14841 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14842 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 14901 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14902 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 14961 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14962 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 15021 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15022 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 15081 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15082 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 15141 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 15142 ttgcgctgaagat 15154 Score = 1183 bits (597), Expect = 0.0 Identities = 610/613 (99%), Gaps = 1/613 (0%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122817 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 122876 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 122877 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 122936 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 122937 tgtcactgcttatggacccgaac-taggtgatctatccatgaccaggatgaagcttggat 122995 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122996 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 123055 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123056 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 123115 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123116 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 123175 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123176 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 123235 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123236 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 123295 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123296 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 123355 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123356 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 123415 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 123416 ttgcgctgaagat 123428
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141350 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 141409 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 141410 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 141469 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141470 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 141529 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141530 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 141589 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141590 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 141649 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141650 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 141709 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141710 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 141769 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141770 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 141829 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141830 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 141889 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141890 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 141949 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 141950 ttgcgctgaagat 141962
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93946 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 94005 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 94006 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 94065 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94066 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 94125 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94126 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 94185 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94186 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 94245 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94246 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 94305 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94306 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 94365 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94366 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 94425 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94426 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 94485 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94486 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 94545 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 94546 ttgcgctgaagat 94558
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58069 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 58010 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 58009 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 57950 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57949 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 57890 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57889 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 57830 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57829 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 57770 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57769 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 57710 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57709 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 57650 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57649 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 57590 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57589 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 57530 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57529 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 57470 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 57469 ttgcgctgaagat 57457
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28010 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 28069 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 28070 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 28129 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28130 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 28189 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28190 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 28249 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28250 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 28309 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28310 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 28369 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28370 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 28429 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28430 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 28489 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28490 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 28549 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28550 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 28609 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 28610 ttgcgctgaagat 28622
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268702 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 9268761 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9268762 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 9268821 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268822 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 9268881 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268882 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 9268941 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268942 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 9269001 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269002 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 9269061 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269062 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 9269121 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269122 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 9269181 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269182 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 9269241 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269242 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 9269301 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 9269302 ttgcgctgaagat 9269314 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056616 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 9056675 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9056676 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 9056735 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056736 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 9056795 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056796 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 9056855 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056856 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 9056915 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056916 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 9056975 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056976 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 9057035 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057036 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 9057095 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057096 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 9057155 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 9057215 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 9057216 ttgcgctgaagat 9057228 Score = 1199 bits (605), Expect = 0.0 Identities = 611/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228202 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 9228261 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9228262 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 9228321 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9228322 tgtcactgcttatggacccgaacctaggtgatctatccatgaccaggatgaagcttggat 9228381 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228382 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 9228441 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228442 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 9228501 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228502 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 9228561 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228562 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 9228621 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228622 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 9228681 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228682 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 9228741 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228742 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 9228801 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 9228802 ttgcgctgaagat 9228814 Score = 1183 bits (597), Expect = 0.0 Identities = 610/613 (99%), Gaps = 1/613 (0%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164791 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 9164850 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9164851 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 9164910 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 9164911 tgtcactgcttatggacccgaac-taggtgatctatccatgaccaggatgaagcttggat 9164969 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164970 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 9165029 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165030 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 9165089 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165090 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 9165149 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165150 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 9165209 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165210 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 9165269 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165270 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 9165329 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165330 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 9165389 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 9165390 ttgcgctgaagat 9165402
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938687 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 19938746 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 19938747 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 19938806 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938807 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 19938866 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938867 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 19938926 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938927 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 19938986 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938987 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 19939046 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939047 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 19939106 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939107 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 19939166 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939167 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 19939226 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939227 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 19939286 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 19939287 ttgcgctgaagat 19939299 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387554 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 10387613 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 10387614 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 10387673 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387674 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 10387733 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387734 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 10387793 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387794 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 10387853 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387854 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 10387913 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387914 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 10387973 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387974 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 10388033 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388034 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 10388093 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388094 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 10388153 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 10388154 ttgcgctgaagat 10388166 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276744 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 10276685 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 10276684 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 10276625 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276624 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 10276565 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276564 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 10276505 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276504 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 10276445 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276444 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 10276385 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276384 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 10276325 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276324 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 10276265 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276264 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 10276205 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276204 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 10276145 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 10276144 ttgcgctgaagat 10276132 Score = 54.0 bits (27), Expect = 6e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 358 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 417 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 418 tcggccagtgagacgatgggggataagcttcatcgtcgagag 459 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 589 gatcgagcgcccttgcgctgaagat 613 ||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagat 15833487 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 530 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598869 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 31598928 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 31598929 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 31598988 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598989 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 31599048 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599049 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 31599108 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599109 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 31599168 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599169 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 31599228 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599229 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 31599288 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599289 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 31599348 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599349 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 31599408 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599409 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 31599468 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 31599469 ttgcgctgaagat 31599481 Score = 359 bits (181), Expect = 7e-96 Identities = 181/181 (100%) Strand = Plus / Minus Query: 433 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 493 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 553 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 613 t 613 | Sbjct: 11509900 t 11509900 Score = 157 bits (79), Expect = 5e-35 Identities = 79/79 (100%) Strand = Plus / Minus Query: 535 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 594 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 595 gcgcccttgcgctgaagat 613 ||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagat 27411908 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 449 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 508 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 509 taaaggaggtggggg 523 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 452 gtcgagagggaaacagcccggatcaccagctaaggccc 489 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 351 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 405 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526185 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 33526244 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 33526245 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 33526304 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526305 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 33526364 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526365 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 33526424 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526425 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 33526484 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526485 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 33526544 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526545 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 33526604 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526605 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 33526664 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526665 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 33526724 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526725 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 33526784 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 33526785 ttgcgctgaagat 33526797 Score = 278 bits (140), Expect = 2e-71 Identities = 164/172 (95%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 442 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 501 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 502 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 561 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 562 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 613 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 527917 Score = 186 bits (94), Expect = 6e-44 Identities = 94/94 (100%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678019 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 16677960 Query: 61 cttggttaagggaacggaacccaccggagccgta 94 |||||||||||||||||||||||||||||||||| Sbjct: 16677959 cttggttaagggaacggaacccaccggagccgta 16677926 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 42 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744704 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 589 gatcgagcgcccttgcgctgaagat 613 |||||||| |||||||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagat 9371928
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47356 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 47297 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 47296 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 47237 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47236 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 47177 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47176 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 47117 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47116 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 47057 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47056 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 46997 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46996 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 46937 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46936 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 46877 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46876 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 46817 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46816 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 46757 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 46756 ttgcgctgaagat 46744
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71382 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 71441 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 71442 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 71501 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71502 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 71561 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71562 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 71621 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71622 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 71681 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71682 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 71741 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71742 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 71801 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71802 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 71861 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71862 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 71921 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71922 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 71981 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 71982 ttgcgctgaagat 71994
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 213 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 214 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 273 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 333 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 393 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 453 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 513 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 573 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 633 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 693 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 753 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 754 ttgcgctgaagat 766
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 408 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 409 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 468 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 528 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 529 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 588 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 589 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 648 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 708 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 768 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 769 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 828 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 829 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 888 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 889 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 948 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 949 ttgcgctgaagat 961
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 279 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 280 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 339 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 399 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 459 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 519 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 579 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 639 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 640 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 699 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 759 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 819 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 820 ttgcgctgaagat 832
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 410 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 411 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 470 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 471 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 530 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 590 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 591 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 650 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 651 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 710 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 711 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 770 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 771 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 830 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 831 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 890 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 891 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 950 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 951 ttgcgctgaagat 963
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 229 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 230 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 289 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 349 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 409 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 469 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 529 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 589 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 590 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 649 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 650 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 709 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 769 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 770 ttgcgctgaagat 782
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 349 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 408 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 409 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 468 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 528 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 529 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 588 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 589 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 648 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 708 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 768 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 769 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 828 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 829 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 888 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 889 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 948 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 949 ttgcgctgaagat 961
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949963 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 19950022 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 19950023 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 19950082 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950083 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 19950142 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950143 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 19950202 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950203 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 19950262 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950263 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 19950322 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950323 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 19950382 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950383 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 19950442 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950443 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 19950502 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950503 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 19950562 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 19950563 ttgcgctgaagat 19950575 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393593 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 10393652 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 10393653 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 10393712 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393713 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 10393772 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393773 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 10393832 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393833 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 10393892 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393893 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 10393952 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393953 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 10394012 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394013 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 10394072 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394073 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 10394132 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394133 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 10394192 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 10394193 ttgcgctgaagat 10394205 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282783 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 10282724 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 10282723 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 10282664 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282663 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 10282604 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282603 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 10282544 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282543 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 10282484 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282483 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 10282424 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282423 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 10282364 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282363 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 10282304 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282303 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 10282244 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282243 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 10282184 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 10282183 ttgcgctgaagat 10282171 Score = 54.0 bits (27), Expect = 6e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 358 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 417 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 418 tcggccagtgagacgatgggggataagcttcatcgtcgagag 459 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 589 gatcgagcgcccttgcgctgaagat 613 ||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagat 15841728 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 530 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119324 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 119265 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 119264 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 119205 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119204 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 119145 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119144 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 119085 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119084 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 119025 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119024 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 118965 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118964 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 118905 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118904 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 118845 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118844 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 118785 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118784 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 118725 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 118724 ttgcgctgaagat 118712 Score = 1207 bits (609), Expect = 0.0 Identities = 612/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95715 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 95774 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 95775 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 95834 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95835 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 95894 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95895 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 95954 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95955 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 96014 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96015 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 96074 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96075 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 96134 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96135 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 96194 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96195 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 96254 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96255 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 96314 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 96315 ttgcgctgaagat 96327
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1199 bits (605), Expect = 0.0 Identities = 611/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20777 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 20836 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 20837 cttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 20896 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20897 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 20956 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20957 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 21016 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21017 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 21076 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21077 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 21136 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21137 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 21196 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21197 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 21256 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21257 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 21316 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21317 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 21376 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 21377 ttgcgctgaagat 21389 Score = 1162 bits (586), Expect = 0.0 Identities = 608/614 (99%), Gaps = 1/614 (0%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44341 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 44282 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||| ||||||| |||||||||||| ||||||||||||| |||||||||| Sbjct: 44281 cttggttaagggaatggaaccctccggagccgtagtgaaagcgagtcttcatagggcgat 44222 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44221 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 44162 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44161 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 44102 Query: 241 ggggtg-aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 299 |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 44101 ggggtgtaaatgccactcgaacccagagctagttggttctccccgaaatgcgttgaggcg 44042 Query: 300 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44041 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 43982 Query: 360 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43981 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 43922 Query: 420 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43921 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 43862 Query: 480 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43861 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 43802 Query: 540 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43801 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 43742 Query: 600 cttgcgctgaagat 613 |||||||||||||| Sbjct: 43741 cttgcgctgaagat 43728
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1199 bits (605), Expect = 0.0 Identities = 611/613 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 970 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 911 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 910 cttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 851 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 850 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 791 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 790 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 731 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 730 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 671 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 670 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 611 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 610 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 551 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 550 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 491 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 490 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 431 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 371 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 370 ttgcgctgaagat 358
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1199 bits (605), Expect = 0.0 Identities = 611/613 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123180 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 123121 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 123120 cttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 123061 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123060 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 123001 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123000 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 122941 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122940 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 122881 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122880 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 122821 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 122761 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 122701 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 122641 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122640 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 122581 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 122580 ttgcgctgaagat 122568 Score = 1199 bits (605), Expect = 0.0 Identities = 611/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99657 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 99716 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 99717 cttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 99776 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99777 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 99836 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99837 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 99896 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99897 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 99956 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99957 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 100016 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100017 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 100076 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100077 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 100136 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100137 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 100196 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100197 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 100256 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 100257 ttgcgctgaagat 100269
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1199 bits (605), Expect = 0.0 Identities = 611/613 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123897 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 123838 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 123837 cttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 123778 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123777 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 123718 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123717 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 123658 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123657 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 123598 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123597 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 123538 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123537 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 123478 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123477 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 123418 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123417 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 123358 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123357 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 123298 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 123297 ttgcgctgaagat 123285 Score = 1199 bits (605), Expect = 0.0 Identities = 611/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100334 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 100393 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 100394 cttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 100453 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100454 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 100513 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100514 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 100573 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100574 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 100633 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100634 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 100693 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100694 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 100753 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100754 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 100813 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100814 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 100873 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100874 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 100933 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 100934 ttgcgctgaagat 100946
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1191 bits (601), Expect = 0.0 Identities = 610/613 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 9241579 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtgg 9241520 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 9241519 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 9241460 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241459 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 9241400 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 9241399 gaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatgagttgtggtta 9241340 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241339 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 9241280 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241279 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 9241220 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241219 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 9241160 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241159 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 9241100 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241099 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 9241040 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241039 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 9240980 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 9240979 ttgcgctgaagat 9240967 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 323 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 382 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 383 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 442 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 443 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 488 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 109 bits (55), Expect = 1e-20 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 477 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 530 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 531 acagccaggaggtttgcctagaagcagccaccctttaaagag 572 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 40.1 bits (20), Expect = 8.3 Identities = 35/40 (87%) Strand = Plus / Minus Query: 476 accagctaaggcccctaaatgaccgctcagtgataaagga 515 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1191 bits (601), Expect = 0.0 Identities = 610/613 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 52792 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtgg 52733 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 52732 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 52673 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52672 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 52613 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 52612 gaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatgagttgtggtta 52553 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52552 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 52493 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52492 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 52433 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52432 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 52373 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52372 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 52313 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52312 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 52253 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52252 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 52193 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 52192 ttgcgctgaagat 52180
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1191 bits (601), Expect = 0.0 Identities = 610/613 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 407 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 408 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 467 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 527 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 528 gaaaccaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 587 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 588 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 647 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 648 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 707 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 708 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 767 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 827 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 828 ctaaggcccctaaatgaccgctcagtgatagaggaggtgggggtgcaaagacagccagga 887 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 888 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 947 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 948 ttgcgctgaagat 960
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1179 bits (595), Expect = 0.0 Identities = 598/599 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 410 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 411 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 470 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 471 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 530 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 590 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 591 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 650 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 651 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 710 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 711 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 770 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 771 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 830 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 831 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 890 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 599 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 891 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 949
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1148 bits (579), Expect = 0.0 Identities = 582/583 (99%) Strand = Plus / Plus Query: 31 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 90 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 91 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 150 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 151 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 211 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 241 Query: 271 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 301 Query: 331 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 361 Query: 391 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 421 Query: 451 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 481 Query: 511 aaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaag 570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 aaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaag 541 Query: 571 agtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 613 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 542 agtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 584
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 1146 bits (578), Expect = 0.0 Identities = 581/582 (99%) Strand = Plus / Plus Query: 32 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 91 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 92 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 151 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 152 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 180 Query: 212 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 240 Query: 272 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 331 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 300 Query: 332 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 360 Query: 392 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 420 Query: 452 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 480 Query: 512 aggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaaga 571 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 aggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaaga 540 Query: 572 gtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 613 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 gtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 582
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1136 bits (573), Expect = 0.0 Identities = 605/613 (98%), Gaps = 2/613 (0%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123120 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 123061 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 123060 cttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 123001 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123000 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 122941 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122940 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 122881 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122880 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 122821 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 122820 agcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggta 122762 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122761 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 122702 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122701 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 122642 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 122641 ctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatga 122582 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 122581 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgccc 122523 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 122522 ttgcgctgaagat 122510 Score = 1136 bits (573), Expect = 0.0 Identities = 605/613 (98%), Gaps = 2/613 (0%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99617 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 99676 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 99677 cttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 99736 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99737 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 99796 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99797 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 99856 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99857 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 99916 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 99917 agcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggta 99975 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99976 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 100035 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100036 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 100095 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 100096 ctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatga 100155 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 100156 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgccc 100214 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 100215 ttgcgctgaagat 100227
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1136 bits (573), Expect = 0.0 Identities = 605/613 (98%), Gaps = 2/613 (0%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5970 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 6029 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 6030 cttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 6089 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6090 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 6149 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6150 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 6209 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6210 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 6269 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 6270 agcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggta 6328 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6329 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 6388 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6389 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 6448 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 6449 ctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatga 6508 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 6509 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgccc 6567 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 6568 ttgcgctgaagat 6580
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1136 bits (573), Expect = 0.0 Identities = 605/613 (98%), Gaps = 2/613 (0%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 617 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 618 cttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 677 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 678 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 737 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 797 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 798 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 857 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 858 agcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggta 916 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 917 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 976 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 977 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 1036 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1037 ctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatga 1096 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 1097 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgccc 1155 Query: 601 ttgcgctgaagat 613 ||||||||||||| Sbjct: 1156 ttgcgctgaagat 1168
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 1110 bits (560), Expect = 0.0 Identities = 602/615 (97%), Gaps = 2/615 (0%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg- 59 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 122662 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggtgactcataggcagtgt 122603 Query: 60 -gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcg 118 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 122602 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 122543 Query: 119 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122542 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 122483 Query: 179 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 238 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 122482 atgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggatgagttgtggt 122423 Query: 239 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122422 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 122363 Query: 299 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122362 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 122303 Query: 359 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 418 |||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| || Sbjct: 122302 taccaaattgaggcaaactctgaatactagatatgacccaaaaataataggattcaaagt 122243 Query: 419 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 478 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 122242 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcacc 122183 Query: 479 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 538 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 122182 agctaaggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagccag 122123 Query: 539 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 598 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 122122 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactaatcgagcgc 122063 Query: 599 ccttgcgctgaagat 613 ||||||||||||||| Sbjct: 122062 ccttgcgctgaagat 122048
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 1110 bits (560), Expect = 0.0 Identities = 602/615 (97%), Gaps = 2/615 (0%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg- 59 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12825203 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggtgactcataggcagtgt 12825144 Query: 60 -gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcg 118 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 12825143 ggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcg 12825084 Query: 119 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825083 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 12825024 Query: 179 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 238 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825023 atgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcggatgagttgtggt 12824964 Query: 239 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824963 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 12824904 Query: 299 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824903 gcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 12824844 Query: 359 taccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggt 418 |||||||| |||||||||||||||||||||||||||||||||||||| ||| |||| || Sbjct: 12824843 taccaaattgaggcaaactctgaatactagatatgacccaaaaataataggattcaaagt 12824784 Query: 419 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacc 478 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 12824783 cggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcacc 12824724 Query: 479 agctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccag 538 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 12824723 agctaaggcccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagccag 12824664 Query: 539 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 598 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 12824663 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactaatcgagcgc 12824604 Query: 599 ccttgcgctgaagat 613 ||||||||||||||| Sbjct: 12824603 ccttgcgctgaagat 12824589
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 1053 bits (531), Expect = 0.0 Identities = 588/607 (96%), Gaps = 5/607 (0%) Strand = Plus / Minus Query: 7 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141550 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 141491 Query: 67 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 126 ||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 141490 taagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcac 141436 Query: 127 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 186 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 141435 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaact 141376 Query: 187 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 246 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141375 aagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 141316 Query: 247 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141315 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 141256 Query: 307 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct: 141255 tgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaat 141196 Query: 367 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 426 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 141195 cgaggcaaactctgaatactagatatgaccccaaaataacaggggtaaaggtcggccagt 141136 Query: 427 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141135 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 141076 Query: 487 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 546 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 141075 cccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttg 141016 Query: 547 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 606 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 141015 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc 140956 Query: 607 tgaagat 613 |||||| Sbjct: 140955 cgaagat 140949 Score = 1053 bits (531), Expect = 0.0 Identities = 588/607 (96%), Gaps = 5/607 (0%) Strand = Plus / Plus Query: 7 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112107 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 112166 Query: 67 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 126 ||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 112167 taagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcac 112221 Query: 127 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 186 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 112222 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaact 112281 Query: 187 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 246 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112282 aagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 112341 Query: 247 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112342 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 112401 Query: 307 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct: 112402 tgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaat 112461 Query: 367 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 426 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 112462 cgaggcaaactctgaatactagatatgaccccaaaataacaggggtaaaggtcggccagt 112521 Query: 427 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112522 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 112581 Query: 487 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 546 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 112582 cccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttg 112641 Query: 547 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 606 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 112642 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc 112701 Query: 607 tgaagat 613 |||||| Sbjct: 112702 cgaagat 112708
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 1045 bits (527), Expect = 0.0 Identities = 584/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131106 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131047 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 131046 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 130992 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130991 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 130932 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130931 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 130872 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130871 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 130812 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 130811 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 130752 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 130751 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 130692 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130691 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 130632 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 130631 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 130572 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 130571 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 130512 Query: 611 gat 613 ||| Sbjct: 130511 gat 130509 Score = 1045 bits (527), Expect = 0.0 Identities = 584/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103529 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 103588 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 103589 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 103643 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103644 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 103703 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103704 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 103763 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103764 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 103823 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 103824 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 103883 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103884 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 103943 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103944 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104003 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 104004 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 104063 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 104064 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 104123 Query: 611 gat 613 ||| Sbjct: 104124 gat 104126
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 1045 bits (527), Expect = 0.0 Identities = 584/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 621 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 622 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 676 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 677 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 736 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 796 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 856 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 857 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 916 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 917 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 976 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 977 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1036 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 1037 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 1096 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 1097 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 1156 Query: 611 gat 613 ||| Sbjct: 1157 gat 1159
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 1039 bits (524), Expect = 0.0 Identities = 588/608 (96%), Gaps = 6/608 (0%) Strand = Plus / Minus Query: 6 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 65 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133666 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 133607 Query: 66 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 125 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 133606 ttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 133552 Query: 126 ctgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaac 185 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 133551 ctgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaac 133492 Query: 186 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 245 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133491 taagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 133432 Query: 246 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133431 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 133372 Query: 306 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 365 |||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 133371 ttgactagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaa 133312 Query: 366 tcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccag 425 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 133311 tcgaggcaaactctgaatactagatatgacccaaaaatcaca-gggtcaaggtcggccag 133253 Query: 426 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133252 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 133193 Query: 486 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 545 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 133192 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 133133 Query: 546 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 605 |||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 133132 gcctagaagccgccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 133073 Query: 606 ctgaagat 613 | |||||| Sbjct: 133072 ccgaagat 133065 Score = 1039 bits (524), Expect = 0.0 Identities = 588/608 (96%), Gaps = 6/608 (0%) Strand = Plus / Plus Query: 6 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 65 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104305 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 104364 Query: 66 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 125 |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 104365 ttaagggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 104419 Query: 126 ctgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaac 185 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 104420 ctgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaac 104479 Query: 186 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 245 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104480 taagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 104539 Query: 246 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104540 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 104599 Query: 306 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 365 |||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 104600 ttgactagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaa 104659 Query: 366 tcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccag 425 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 104660 tcgaggcaaactctgaatactagatatgacccaaaaatcaca-gggtcaaggtcggccag 104718 Query: 426 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104719 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 104778 Query: 486 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 545 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 104779 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 104838 Query: 546 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 605 |||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 104839 gcctagaagccgccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 104898 Query: 606 ctgaagat 613 | |||||| Sbjct: 104899 ccgaagat 104906
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138943 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 138884 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 138883 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 138829 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138828 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 138769 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138768 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 138709 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138708 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 138649 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 138648 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 138589 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 138588 gcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgaga 138529 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138528 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 138469 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 138468 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 138409 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 138408 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 138349 Query: 611 gat 613 ||| Sbjct: 138348 gat 138346 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110154 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110213 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110214 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110268 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110269 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110328 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110329 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110388 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110389 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 110448 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110449 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110508 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 110509 gcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgaga 110568 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110569 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110628 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 110629 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 110688 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 110689 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 110748 Query: 611 gat 613 ||| Sbjct: 110749 gat 110751
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132214 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132155 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132154 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132100 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132099 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 132040 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132039 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131980 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131979 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131920 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131919 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 131860 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131859 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 131800 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131799 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131740 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 131739 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 131680 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 131679 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 131620 Query: 611 gat 613 ||| Sbjct: 131619 gat 131617 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104664 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104723 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104724 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104778 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104779 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104838 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104839 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104898 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104899 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104958 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104959 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105018 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105019 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 105078 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105079 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105138 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 105139 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 105198 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 105199 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 105258 Query: 611 gat 613 ||| Sbjct: 105259 gat 105261
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136377 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 136318 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 136317 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 136263 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136262 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 136203 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136202 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 136143 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136142 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 136083 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 136082 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 136023 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 136022 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135963 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135962 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135903 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 135902 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 135843 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 135842 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 135783 Query: 611 gat 613 ||| Sbjct: 135782 gat 135780 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107180 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 107239 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 107240 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107294 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107295 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107354 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107355 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107414 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107415 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107474 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107475 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107534 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107535 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107594 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107595 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107654 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 107655 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 107714 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 107715 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 107774 Query: 611 gat 613 ||| Sbjct: 107775 gat 107777
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142318 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 142259 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 142258 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 142204 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142203 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 142144 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142143 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 142084 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 142083 gccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgac 142024 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 142023 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 141964 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 141963 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 141904 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141903 cgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccc 141844 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 141843 taaatgatcgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgccta 141784 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 141783 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 141724 Query: 611 gat 613 ||| Sbjct: 141723 gat 141721 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111010 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 111069 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 111070 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 111124 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111125 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 111184 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111185 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 111244 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 111245 gccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgac 111304 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 111305 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 111364 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 111365 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 111424 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 111425 cgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccc 111484 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 111485 taaatgatcgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgccta 111544 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 111545 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 111604 Query: 611 gat 613 ||| Sbjct: 111605 gat 111607
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134985 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 134926 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134925 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134871 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134870 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134811 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134810 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134751 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134750 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134691 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134690 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134631 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134630 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134571 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134570 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134511 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 134510 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 134451 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 134450 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 134391 Query: 611 gat 613 ||| Sbjct: 134390 gat 134388 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106051 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106110 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106111 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106165 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106225 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106226 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106285 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106345 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106346 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106405 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106406 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106465 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106525 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 106526 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 106585 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106586 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 106645 Query: 611 gat 613 ||| Sbjct: 106646 gat 106648
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136031 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135972 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135971 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135917 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135916 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135857 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135856 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135797 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135796 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135737 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135736 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135677 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135676 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135617 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135616 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135557 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 135556 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 135497 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 135496 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 135437 Query: 611 gat 613 ||| Sbjct: 135436 gat 135434 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106394 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106453 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106454 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106508 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106509 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106568 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106569 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106628 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106629 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106688 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106689 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106748 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106749 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106808 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106809 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106868 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 106869 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 106928 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106929 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 106988 Query: 611 gat 613 ||| Sbjct: 106989 gat 106991
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135120 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135061 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135060 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135006 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135005 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134946 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134945 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134886 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134885 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134826 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134825 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134766 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134765 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134706 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134705 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134646 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 134645 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 134586 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 134585 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 134526 Query: 611 gat 613 ||| Sbjct: 134525 gat 134523 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106223 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106282 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106283 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106337 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106338 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106397 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106398 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106457 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106458 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106517 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106518 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106577 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106578 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106637 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106638 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106697 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 106698 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 106757 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106758 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 106817 Query: 611 gat 613 ||| Sbjct: 106818 gat 106820
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135118 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135059 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135058 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135004 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135003 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134944 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134943 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134884 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134883 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134824 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134823 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134764 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134763 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134704 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134703 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134644 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 134643 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 134584 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 134583 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 134524 Query: 611 gat 613 ||| Sbjct: 134523 gat 134521 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106220 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106279 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106280 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106334 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106335 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106394 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106395 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106454 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106455 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106514 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106515 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106574 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106575 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106634 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106635 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106694 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 106695 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 106754 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106755 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 106814 Query: 611 gat 613 ||| Sbjct: 106815 gat 106817
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135030 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 134971 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134970 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134916 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134915 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134856 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134855 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134796 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134736 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134735 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134676 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134675 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134616 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134615 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134556 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 134555 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 134496 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 134495 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 134436 Query: 611 gat 613 ||| Sbjct: 134435 gat 134433 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106098 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106157 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106158 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106212 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106213 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106272 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106273 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106332 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106333 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106392 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106393 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106452 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106453 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106512 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106513 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106572 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 106573 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 106632 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106633 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 106692 Query: 611 gat 613 ||| Sbjct: 106693 gat 106695
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132207 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132148 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132147 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132093 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132092 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 132033 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132032 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131973 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131972 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131913 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131912 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 131853 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131852 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 131793 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131792 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131733 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 131732 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 131673 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 131672 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 131613 Query: 611 gat 613 ||| Sbjct: 131612 gat 131610 Score = 1037 bits (523), Expect = 0.0 Identities = 583/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104662 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104721 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104722 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104776 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104777 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104836 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104837 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104896 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104897 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104956 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104957 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105016 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105017 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 105076 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105077 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105136 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 105137 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 105196 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 105197 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 105256 Query: 611 gat 613 ||| Sbjct: 105257 gat 105259
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 1033 bits (521), Expect = 0.0 Identities = 581/601 (96%), Gaps = 5/601 (0%) Strand = Plus / Minus Query: 13 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131228 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 131169 Query: 73 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 132 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 131168 aac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 131114 Query: 133 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 192 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 131113 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgg 131054 Query: 193 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131053 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 130994 Query: 253 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130993 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 130934 Query: 313 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 372 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 130933 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 130874 Query: 373 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 432 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 130873 aaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacg 130814 Query: 433 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130813 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 130754 Query: 493 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 552 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 130753 aatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctaga 130694 Query: 553 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 612 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 130693 agcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaaga 130634 Query: 613 t 613 | Sbjct: 130633 t 130633 Score = 1033 bits (521), Expect = 0.0 Identities = 581/601 (96%), Gaps = 5/601 (0%) Strand = Plus / Plus Query: 13 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102217 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 102276 Query: 73 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 132 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 102277 aac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 102331 Query: 133 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 192 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 102332 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgg 102391 Query: 193 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102392 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 102451 Query: 253 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102452 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 102511 Query: 313 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 372 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 102512 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 102571 Query: 373 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 432 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 102572 aaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacg 102631 Query: 433 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102632 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 102691 Query: 493 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 552 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 102692 aatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctaga 102751 Query: 553 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 612 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 102752 agcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaaga 102811 Query: 613 t 613 | Sbjct: 102812 t 102812
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 1029 bits (519), Expect = 0.0 Identities = 582/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135739 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135680 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135679 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135625 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135624 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135565 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135564 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135505 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135504 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135445 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135444 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135385 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135384 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135325 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135324 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135265 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 135264 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 135205 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 135204 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 135145 Query: 611 gat 613 ||| Sbjct: 135144 gat 135142 Score = 1029 bits (519), Expect = 0.0 Identities = 582/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106891 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106950 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106951 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107005 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107006 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107065 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107066 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107125 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107126 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107185 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107186 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107245 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107246 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107305 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107306 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107365 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 107366 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 107425 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 107426 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 107485 Query: 611 gat 613 ||| Sbjct: 107486 gat 107488
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 1029 bits (519), Expect = 0.0 Identities = 582/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135340 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135281 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 135280 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 135226 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135225 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135166 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135165 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135106 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135105 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135046 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135045 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134986 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 134985 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 134926 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134925 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134866 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 134865 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 134806 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 134805 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 134746 Query: 611 gat 613 ||| Sbjct: 134745 gat 134743 Score = 1029 bits (519), Expect = 0.0 Identities = 582/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106566 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106625 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 106626 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 106680 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106681 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106740 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106800 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106801 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106860 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106861 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106920 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 106921 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 106980 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106981 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107040 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 107041 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 107100 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 107101 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 107160 Query: 611 gat 613 ||| Sbjct: 107161 gat 107163
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 1029 bits (519), Expect = 0.0 Identities = 582/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2085 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 2144 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2145 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 2199 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2200 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 2259 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2260 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 2319 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2320 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 2379 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 2380 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 2439 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 2440 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 2499 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2500 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 2559 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 2560 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 2619 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 2620 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 2679 Query: 611 gat 613 ||| Sbjct: 2680 gat 2682
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 1029 bits (519), Expect = 0.0 Identities = 582/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135619 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135560 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 135559 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 135505 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135504 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135445 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135444 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135385 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135384 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135325 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135324 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135265 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 135264 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 135205 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135204 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135145 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 135144 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 135085 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 135084 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 135025 Query: 611 gat 613 ||| Sbjct: 135024 gat 135022 Score = 1029 bits (519), Expect = 0.0 Identities = 582/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106788 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106847 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 106848 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 106902 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106903 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106962 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106963 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107022 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107023 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107082 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107083 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107142 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 107143 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 107202 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107203 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107262 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 107263 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 107322 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 107323 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 107382 Query: 611 gat 613 ||| Sbjct: 107383 gat 107385
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 1029 bits (519), Expect = 0.0 Identities = 582/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135737 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135678 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135677 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135623 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135622 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135563 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135562 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135503 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135502 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135443 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135442 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135383 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135382 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135323 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135322 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135263 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 135262 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 135203 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 135202 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 135143 Query: 611 gat 613 ||| Sbjct: 135142 gat 135140 Score = 1029 bits (519), Expect = 0.0 Identities = 582/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106889 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106948 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106949 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 107003 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107004 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 107063 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107064 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107123 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107124 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107183 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107184 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107243 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107244 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107303 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107304 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107363 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 107364 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 107423 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 107424 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 107483 Query: 611 gat 613 ||| Sbjct: 107484 gat 107486
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 1029 bits (519), Expect = 0.0 Identities = 582/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135468 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135409 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 135408 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 135354 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135353 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135294 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135293 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135234 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135233 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135174 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135173 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135114 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 135113 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 135054 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135053 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134994 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 134993 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 134934 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 134933 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 134874 Query: 611 gat 613 ||| Sbjct: 134873 gat 134871 Score = 1029 bits (519), Expect = 0.0 Identities = 582/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106670 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106729 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106730 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106784 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106785 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106844 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106845 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106904 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106905 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106964 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106965 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107024 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 107025 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 107084 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107085 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107144 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 107145 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 107204 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 107205 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 107264 Query: 611 gat 613 ||| Sbjct: 107265 gat 107267
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 1029 bits (519), Expect = 0.0 Identities = 582/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139148 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139089 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139088 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 139034 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139033 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 138974 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138973 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 138914 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138913 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 138854 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 138853 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 138794 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 138793 gcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgaga 138734 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138733 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 138674 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 138673 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 138614 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 138613 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 138554 Query: 611 gat 613 ||| Sbjct: 138553 gat 138551 Score = 1029 bits (519), Expect = 0.0 Identities = 582/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110151 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110210 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110211 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110265 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110266 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110325 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110326 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110385 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110386 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 110445 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110446 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110505 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 110506 gcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgaga 110565 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110566 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110625 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 110626 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 110685 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 110686 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 110745 Query: 611 gat 613 ||| Sbjct: 110746 gat 110748
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 1029 bits (519), Expect = 0.0 Identities = 582/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 717 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 718 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 772 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 773 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 832 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 892 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 952 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 953 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 1012 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 1013 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 1072 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1073 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1132 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 ||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 1133 taaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 1192 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 1193 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 1252 Query: 611 gat 613 ||| Sbjct: 1253 gat 1255
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 1023 bits (516), Expect = 0.0 Identities = 588/612 (96%), Gaps = 10/612 (1%) Strand = Plus / Minus Query: 7 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139028 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 138969 Query: 67 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 126 ||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||||| Sbjct: 138968 taagggaac-----ccaccggagccatagcgaaagcgagtcttcatagggcaattgtcac 138914 Query: 127 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 186 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 138913 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaact 138854 Query: 187 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 246 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138853 aagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 138794 Query: 247 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138793 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 138734 Query: 307 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct: 138733 tgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaat 138674 Query: 367 cgaggcaaactctgaatactagatatgaccc-----aaaaataacaggggtcaaggtcgg 421 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 138673 cgaggcaaactctgaatactagatatgaccccaaaacaaaataacaggggtcaaggtcgg 138614 Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138613 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 138554 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 138553 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 138494 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 601 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 138493 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 138434 Query: 602 tgcgctgaagat 613 ||||| |||||| Sbjct: 138433 tgcgccgaagat 138422 Score = 1023 bits (516), Expect = 0.0 Identities = 588/612 (96%), Gaps = 10/612 (1%) Strand = Plus / Plus Query: 7 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110917 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 110976 Query: 67 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 126 ||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||||| Sbjct: 110977 taagggaac-----ccaccggagccatagcgaaagcgagtcttcatagggcaattgtcac 111031 Query: 127 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 186 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 111032 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaact 111091 Query: 187 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 246 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111092 aagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 111151 Query: 247 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111152 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 111211 Query: 307 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct: 111212 tgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaat 111271 Query: 367 cgaggcaaactctgaatactagatatgaccc-----aaaaataacaggggtcaaggtcgg 421 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 111272 cgaggcaaactctgaatactagatatgaccccaaaacaaaataacaggggtcaaggtcgg 111331 Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 111391 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 111392 taaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggag 111451 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 601 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 111452 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctct 111511 Query: 602 tgcgctgaagat 613 ||||| |||||| Sbjct: 111512 tgcgccgaagat 111523
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1023 bits (516), Expect = 0.0 Identities = 522/524 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 520 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 521 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 580 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 640 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 641 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 700 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 701 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 760 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 820 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 821 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 880 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 881 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 940 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 524 |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 941 ctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 984
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 1021 bits (515), Expect = 0.0 Identities = 585/608 (96%), Gaps = 9/608 (1%) Strand = Plus / Minus Query: 6 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 65 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127307 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 127248 Query: 66 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 125 ||||||||| |||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 127247 ttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtca 127193 Query: 126 ctgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaac 185 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 127192 ctgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaac 127133 Query: 186 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 245 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127132 taagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 127073 Query: 246 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127072 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 127013 Query: 306 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 365 |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 127012 ttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaa 126953 Query: 366 tcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccag 425 |||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 126952 tcgaggcaaactctgaatactagatatgacccca----aacaggggtcaaggtcggccag 126897 Query: 426 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126896 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 126837 Query: 486 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 545 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 126836 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 126777 Query: 546 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 605 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 126776 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 126717 Query: 606 ctgaagat 613 | |||||| Sbjct: 126716 ccgaagat 126709 Score = 1021 bits (515), Expect = 0.0 Identities = 585/608 (96%), Gaps = 9/608 (1%) Strand = Plus / Plus Query: 6 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 65 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107615 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 107674 Query: 66 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 125 ||||||||| |||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 107675 ttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtca 107729 Query: 126 ctgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaac 185 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 107730 ctgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaac 107789 Query: 186 taagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 245 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107790 taagtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggt 107849 Query: 246 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107850 gaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag 107909 Query: 306 ttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaa 365 |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 107910 ttgactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaa 107969 Query: 366 tcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccag 425 |||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 107970 tcgaggcaaactctgaatactagatatgacccca----aacaggggtcaaggtcggccag 108025 Query: 426 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108026 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 108085 Query: 486 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 545 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 108086 gcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggttt 108145 Query: 546 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 605 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 108146 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcg 108205 Query: 606 ctgaagat 613 | |||||| Sbjct: 108206 ccgaagat 108213
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 1021 bits (515), Expect = 0.0 Identities = 581/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134997 ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag 134938 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 134937 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 134883 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134882 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 134823 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134822 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 134763 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134762 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 134703 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 134702 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134643 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 134642 gcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 134583 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134582 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134523 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 134522 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 134463 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 134462 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 134403 Query: 611 gat 613 ||| Sbjct: 134402 gat 134400 Score = 1021 bits (515), Expect = 0.0 Identities = 581/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106065 ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag 106124 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106125 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 106179 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106180 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106239 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106240 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106299 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106300 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106359 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106360 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106419 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 106420 gcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 106479 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106480 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 106539 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 106540 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 106599 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 106600 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 106659 Query: 611 gat 613 ||| Sbjct: 106660 gat 106662
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 1013 bits (511), Expect = 0.0 Identities = 580/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 619 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 620 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 674 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 675 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 734 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 735 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 794 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 854 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 855 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 914 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 915 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 974 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1034 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 1035 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 1094 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 1095 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 1154 Query: 611 gat 613 ||| Sbjct: 1155 gat 1157
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 1013 bits (511), Expect = 0.0 Identities = 580/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132437 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132378 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132377 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132323 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 132322 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 132263 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 132262 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 132203 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132202 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 132143 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 132142 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 132083 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 132082 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 132023 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132022 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131963 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 131962 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 131903 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 131902 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 131843 Query: 611 gat 613 ||| Sbjct: 131842 gat 131840 Score = 1013 bits (511), Expect = 0.0 Identities = 580/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104327 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104386 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104387 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104441 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 104442 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 104501 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104502 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 104561 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104562 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104621 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104622 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 104681 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 104682 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 104741 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104742 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104801 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 104802 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 104861 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 104862 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 104921 Query: 611 gat 613 ||| Sbjct: 104922 gat 104924
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 1013 bits (511), Expect = 0.0 Identities = 580/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133398 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 133339 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 133338 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 133284 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 133283 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 133224 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 133223 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 133164 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133163 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 133104 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 133103 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 133044 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 133043 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 132984 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132983 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 132924 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 132923 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 132864 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 132863 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 132804 Query: 611 gat 613 ||| Sbjct: 132803 gat 132801 Score = 1013 bits (511), Expect = 0.0 Identities = 580/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105251 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105310 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 105311 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 105365 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 105366 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 105425 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105426 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 105485 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105486 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 105545 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 105546 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105605 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 105606 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 105665 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105666 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105725 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 105726 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 105785 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 105786 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 105845 Query: 611 gat 613 ||| Sbjct: 105846 gat 105848
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 1007 bits (508), Expect = 0.0 Identities = 581/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 1115 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1116 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 1170 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1171 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 1230 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1231 gagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 1290 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1291 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 1350 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 1351 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 1410 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1411 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 1470 Query: 431 cgat-gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 489 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1471 cgatggggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1530 Query: 490 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 549 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1531 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 1590 Query: 550 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 609 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1591 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 1650 Query: 610 agat 613 |||| Sbjct: 1651 agat 1654
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 1005 bits (507), Expect = 0.0 Identities = 579/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131306 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131247 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 131246 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgct 131192 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131191 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 131132 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131131 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131072 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131071 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131012 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131011 tagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 130952 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 130951 gcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgaga 130892 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130891 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 130832 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||| Sbjct: 130831 taaatgaccgctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgccta 130772 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 130771 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 130712 Query: 611 gat 613 ||| Sbjct: 130711 gat 130709 Score = 1005 bits (507), Expect = 0.0 Identities = 579/603 (96%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104088 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104147 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 104148 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgct 104202 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104203 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104262 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104263 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104322 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104323 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104382 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104383 tagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 104442 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 104443 gcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgaga 104502 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104503 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104562 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||| Sbjct: 104563 taaatgaccgctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgccta 104622 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 104623 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 104682 Query: 611 gat 613 ||| Sbjct: 104683 gat 104685
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 997 bits (503), Expect = 0.0 Identities = 579/605 (95%), Gaps = 12/605 (1%) Strand = Plus / Minus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134425 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 134366 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 134365 agggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 134311 Query: 129 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 188 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134310 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 134251 Query: 189 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 248 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134250 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134191 Query: 249 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134190 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 134131 Query: 309 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 368 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 134130 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 134071 Query: 369 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 428 |||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 134070 aggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtga 134018 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134017 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 133958 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 133957 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcc 133898 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 608 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 133897 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 133838 Query: 609 aagat 613 ||||| Sbjct: 133837 aagat 133833 Score = 997 bits (503), Expect = 0.0 Identities = 579/605 (95%), Gaps = 12/605 (1%) Strand = Plus / Plus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105857 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 105916 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 ||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 105917 agggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 105971 Query: 129 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 188 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105972 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 106031 Query: 189 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 248 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106032 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 106091 Query: 249 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106092 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 106151 Query: 309 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 368 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 106152 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 106211 Query: 369 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 428 |||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 106212 aggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtga 106264 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106265 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 106324 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 106325 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcc 106384 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 608 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 106385 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 106444 Query: 609 aagat 613 ||||| Sbjct: 106445 aagat 106449
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 997 bits (503), Expect = 0.0 Identities = 578/603 (95%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 567 ctctgaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttggttaag 626 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 627 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 681 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 682 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 741 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 801 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 861 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 862 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 921 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 922 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 981 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 982 cgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccc 1041 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 1042 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 1101 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 1102 aaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 1161 Query: 611 gat 613 ||| Sbjct: 1162 gat 1164
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 989 bits (499), Expect = 0.0 Identities = 502/503 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 346 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 405 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 406 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 465 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 525 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 526 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 585 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 586 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 645 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 705 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 706 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 765 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 825 Query: 481 ctaaggcccctaaatgaccgctc 503 ||||||||||||||||||||||| Sbjct: 826 ctaaggcccctaaatgaccgctc 848
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 989 bits (499), Expect = 0.0 Identities = 577/603 (95%), Gaps = 5/603 (0%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 129795 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129794 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 129735 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129734 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 129675 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 129674 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 129615 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 129614 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 129555 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 129554 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccc 129495 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 129494 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 129435 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 129434 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 129375 Query: 611 gat 613 ||| Sbjct: 129374 gat 129372 Score = 989 bits (499), Expect = 0.0 Identities = 577/603 (95%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 102661 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102662 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 102721 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102722 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 102781 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 102782 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 102841 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 102842 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 102901 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 102902 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccc 102961 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 102962 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 103021 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 103022 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 103081 Query: 611 gat 613 ||| Sbjct: 103082 gat 103084
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 985 bits (497), Expect = 0.0 Identities = 581/605 (96%), Gaps = 8/605 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2329 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 2388 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 2389 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 2443 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2444 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 2503 Query: 191 agagg-tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 249 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2504 ggagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 2563 Query: 250 tg-ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2564 tggccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 2623 Query: 309 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 368 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 2624 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 2683 Query: 369 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 428 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 2684 aggcaaactctgaatactagatatgactcaaaa-taacaggggtcaaggtcggctagtga 2742 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2743 gacgatgggggataagcttcatcgtcgagagggaaacagtccggatcaccagctaaggcc 2802 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 2803 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcc 2862 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 608 ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| | Sbjct: 2863 tagaagcagccacccttgaaagagtgcgtaatagcscactgatcgagcgctcttgcgccg 2922 Query: 609 aagat 613 ||||| Sbjct: 2923 aagat 2927
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 983 bits (496), Expect = 0.0 Identities = 571/596 (95%), Gaps = 5/596 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 628 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 629 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 683 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 684 tatggacccgaacctgggtgatctatccatgaccaggatggagcttgggtgaaactaagt 743 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 744 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 803 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 804 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 863 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 864 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 923 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 924 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 983 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 984 caatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1043 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||| ||||||||||||| |||||||| ||||||||| |||||||||||| Sbjct: 1044 taaatgaccgctcaatgataaaggaggtaggggtgcacagacagccacgaggtttgccta 1103 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 606 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1104 taagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc 1159
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 971 bits (490), Expect = 0.0 Identities = 576/603 (95%), Gaps = 5/603 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 935 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 936 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 995 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 996 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1055 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 1056 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 1115 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 1116 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 1175 Query: 611 gat 613 ||| Sbjct: 1176 gat 1178
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 969 bits (489), Expect = 0.0 Identities = 574/603 (95%), Gaps = 12/603 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 220 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 280 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 281 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 340 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 341 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 400 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 401 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 453 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 513 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 514 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 573 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 574 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 633 Query: 611 gat 613 ||| Sbjct: 634 gat 636
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 969 bits (489), Expect = 0.0 Identities = 574/603 (95%), Gaps = 12/603 (1%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139799 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139740 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139739 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 139685 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139684 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 139625 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139624 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 139565 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 139564 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 139505 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 139504 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 139445 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 139444 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 139392 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139391 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 139332 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 139331 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 139272 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 139271 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 139212 Query: 611 gat 613 ||| Sbjct: 139211 gat 139209 Score = 969 bits (489), Expect = 0.0 Identities = 574/603 (95%), Gaps = 12/603 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110261 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110320 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110321 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110375 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110376 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110435 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110436 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110495 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110496 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 110555 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110556 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110615 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 110616 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 110668 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110669 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110728 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 110729 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 110788 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 110789 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 110848 Query: 611 gat 613 ||| Sbjct: 110849 gat 110851
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 961 bits (485), Expect = 0.0 Identities = 573/603 (95%), Gaps = 12/603 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 236 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 296 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 297 gccgctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 356 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 357 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 416 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 417 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 469 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 529 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 530 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgccta 589 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 590 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 649 Query: 611 gat 613 ||| Sbjct: 650 gat 652
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 961 bits (485), Expect = 0.0 Identities = 548/569 (96%), Gaps = 5/569 (0%) Strand = Plus / Plus Query: 45 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 104 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 105 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 164 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 165 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 224 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 766 Query: 225 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 826 Query: 285 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 886 Query: 345 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaata 404 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 887 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaata 946 Query: 405 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 464 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 acaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 1006 Query: 465 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1007 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 1066 Query: 525 gcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagct 584 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1067 gcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagct 1126 Query: 585 cactgatcgagcgcccttgcgctgaagat 613 |||||||||||||| ||||||| |||||| Sbjct: 1127 cactgatcgagcgctcttgcgccgaagat 1155
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 961 bits (485), Expect = 0.0 Identities = 488/489 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 554 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 613 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 614 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 673 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 674 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 733 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 793 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 853 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 854 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 913 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 914 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 973 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 974 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 1033 Query: 481 ctaaggccc 489 ||||||||| Sbjct: 1034 ctaaggccc 1042
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 959 bits (484), Expect = 0.0 Identities = 576/604 (95%), Gaps = 7/604 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 177579 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 177580 ggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtgaaat 177638 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177639 gccactcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 177698 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| Sbjct: 177699 tggacatctaggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcgag 177758 Query: 371 gcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtgag 429 |||||||||||||||||||||||||| ||||||| | |||| |||||||||| |||||| Sbjct: 177759 gcaaactctgaatactagatatgacctcaaaataagaggggggcaaggtcggctagtgag 177818 Query: 430 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 489 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 177819 acgatgggggataagcttcatcgtcgagagggaaagagcccggatcaccagctaaggccc 177878 Query: 490 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 549 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 177879 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 177938 Query: 550 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 609 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 177939 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 177998 Query: 610 agat 613 |||| Sbjct: 177999 agat 178002 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 530 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 530 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 484 aggcccctaaatgaccgctcag 505 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 452 gtcgagagggaaacagcccggatc 475 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 452 gtcgagagggaaacagcccggatc 475 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 940 bits (474), Expect = 0.0 Identities = 522/538 (97%) Strand = Plus / Plus Query: 76 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 135 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 136 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 195 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 196 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 781 Query: 256 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 841 Query: 316 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 375 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 842 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 901 Query: 376 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 435 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 902 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 961 Query: 436 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1021 Query: 496 gaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagc 555 |||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 1022 gaccgcccagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagc 1081 Query: 556 agccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 613 |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1082 agccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 1139
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 936 bits (472), Expect = 0.0 Identities = 566/596 (94%), Gaps = 6/596 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 754 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 814 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 874 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 875 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 934 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 935 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 994 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 995 ccatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccc 1054 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| Sbjct: 1055 taaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaagaggtttgccta 1114 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 606 ||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1115 gaagcagccacccttgaaagagtgcgtaatagctcactgatccagcgctcttgcgc 1170
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 936 bits (472), Expect = 0.0 Identities = 573/604 (94%), Gaps = 7/604 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 71 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 129 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 130 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 190 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 814 Query: 250 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 874 Query: 310 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 369 ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 875 ctggacatctaagggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 934 Query: 370 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 429 |||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 935 ggcaaactctgaatactaaatatgacctcaaaataacaggggttaaggtcggccagtgag 994 Query: 430 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 489 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 995 acgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggccc 1054 Query: 490 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 549 ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| Sbjct: 1055 ctaaatgaccgctcagtgataaaggaggtaggggtgcacagacagccaagaggtttgcct 1114 Query: 550 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 609 | |||||||||||||| ||||||||||||||| |||||||||||||||| ||||||| || Sbjct: 1115 aaaagcagccacccttgaaagagtgcgtaataactcactgatcgagcgctcttgcgccga 1174 Query: 610 agat 613 |||| Sbjct: 1175 agat 1178
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 930 bits (469), Expect = 0.0 Identities = 564/596 (94%), Gaps = 11/596 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgag 935 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| | |||||||| ||||||||||| ||||| Sbjct: 936 gcaaactctgaatactagatatgacc------tcacaggggttaaggtcggccaatgaga 989 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 990 cgatgggggataagcttcatcttccagagggaaacagcccggatcaccagctaaggcccc 1049 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1050 taaatgaccgctcagtgataaaggaggtaggggtgcaaagacagccacgaggtttgccta 1109 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 606 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1110 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc 1165
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 928 bits (468), Expect = 0.0 Identities = 571/604 (94%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 619 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||| |||||||||||||| || ||||| | |||||||||||| Sbjct: 620 ggaac-----ccaccggagccatagcgaaagcgagtattcataggactattgtcactgct 674 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 675 tatggacccgaacctgggtgatctatccatgaccaggatgaagctttggtgaaactaagt 734 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 794 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 854 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 855 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 914 Query: 371 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 429 |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 915 gcaaactctgaatactagaatatgacctaaaaataacaggggtaaaggtcggccagtgag 974 Query: 430 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 489 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 975 acgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggccc 1034 Query: 490 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 549 |||| ||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1035 ctaattgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 1094 Query: 550 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 609 |||||||||||||||| ||| |||||||||||||| ||||||||||||| ||||||| || Sbjct: 1095 agaagcagccacccttgaaatagtgcgtaatagcttactgatcgagcgctcttgcgccga 1154 Query: 610 agat 613 |||| Sbjct: 1155 agat 1158
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 924 bits (466), Expect = 0.0 Identities = 567/598 (94%), Gaps = 7/598 (1%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 52125 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 52066 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 52065 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 52011 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 52010 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 51951 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51950 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 51891 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51890 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 51831 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 51830 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 51771 Query: 371 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 429 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 51770 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 51711 Query: 430 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51710 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 51651 Query: 490 ctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagccaggaggtttgcc 548 |||| ||| ||||||||||||||||||| | |||||||| |||||||||||||||||||| Sbjct: 51650 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgcc 51591 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 606 ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| Sbjct: 51590 tagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgc 51533 Score = 924 bits (466), Expect = 0.0 Identities = 567/598 (94%), Gaps = 7/598 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 37703 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 37762 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 37763 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 37817 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 37818 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 37877 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37878 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 37937 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37938 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 37997 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 37998 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 38057 Query: 371 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 429 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 38058 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 38117 Query: 430 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38118 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 38177 Query: 490 ctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagccaggaggtttgcc 548 |||| ||| ||||||||||||||||||| | |||||||| |||||||||||||||||||| Sbjct: 38178 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgcc 38237 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 606 ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| Sbjct: 38238 tagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgc 38295
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 924 bits (466), Expect = 0.0 Identities = 567/598 (94%), Gaps = 7/598 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4631 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 4690 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||| |||||||||||||| || ||||||| |||||||||||| Sbjct: 4691 ggaac-----ccaccggagccatagcgaaagcgagtattcatagggcaattgtcactgct 4745 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4746 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 4805 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4806 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 4865 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4866 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 4925 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 4926 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 4985 Query: 371 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 429 |||||||||||||||||| |||||||| | |||||| |||||| |||||||||||||||| Sbjct: 4986 gcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgag 5045 Query: 430 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5046 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 5105 Query: 490 ctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagccaggaggtttgcc 548 |||| ||| ||||||||||||||||||| | |||||||| |||||||||||||||||||| Sbjct: 5106 ctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgcc 5165 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 606 ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| Sbjct: 5166 tagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgc 5223
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 910 bits (459), Expect = 0.0 Identities = 572/607 (94%), Gaps = 7/607 (1%) Strand = Plus / Plus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 561 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 620 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 621 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 675 Query: 129 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 188 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 676 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 735 Query: 189 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 248 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 795 Query: 249 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 855 Query: 309 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 367 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 856 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 915 Query: 368 gaggcaaactctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagt 426 ||||||||||||||||||||||||||| || |||||||||||| | |||||| ||||| Sbjct: 916 gaggcaaactctgaatactagatatgatccccaaataacaggggataaaggtcaaccagt 975 Query: 427 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 486 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 976 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 1035 Query: 487 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 546 ||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||| Sbjct: 1036 cccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttg 1095 Query: 547 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 606 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1096 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgc 1155 Query: 607 tgaagat 613 |||||| Sbjct: 1156 cgaagat 1162
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 878 bits (443), Expect = 0.0 Identities = 568/607 (93%), Gaps = 7/607 (1%) Strand = Plus / Minus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 117588 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 117529 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 117528 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 117474 Query: 129 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 188 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 117473 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaa 117414 Query: 189 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 248 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 117413 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 117354 Query: 249 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117353 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 117294 Query: 309 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 367 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 117293 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 117234 Query: 368 gaggcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagt 426 ||||||||||||||||||||||||||| || |||||| | ||||| | |||| ||||| Sbjct: 117233 gaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtcaaccagt 117174 Query: 427 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 486 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 117173 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 117114 Query: 487 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 546 |||||||||||||||| |||| |||||||||| || |||||||||||||||||||||||| Sbjct: 117113 cccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttg 117054 Query: 547 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 606 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 117053 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgc 116994 Query: 607 tgaagat 613 |||||| Sbjct: 116993 cgaagat 116987 Score = 878 bits (443), Expect = 0.0 Identities = 568/607 (93%), Gaps = 7/607 (1%) Strand = Plus / Plus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 90514 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtta 90573 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 90574 agggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcacta 90628 Query: 129 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 188 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 90629 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaa 90688 Query: 189 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 248 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 90689 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 90748 Query: 249 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90749 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 90808 Query: 309 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 367 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 90809 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 90868 Query: 368 gaggcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagt 426 ||||||||||||||||||||||||||| || |||||| | ||||| | |||| ||||| Sbjct: 90869 gaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtcaaccagt 90928 Query: 427 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 486 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 90929 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 90988 Query: 487 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 546 |||||||||||||||| |||| |||||||||| || |||||||||||||||||||||||| Sbjct: 90989 cccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttg 91048 Query: 547 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 606 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 91049 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgc 91108 Query: 607 tgaagat 613 |||||| Sbjct: 91109 cgaagat 91115
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 874 bits (441), Expect = 0.0 Identities = 568/607 (93%), Gaps = 10/607 (1%) Strand = Plus / Plus Query: 8 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 67 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 86823 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtt 86882 Query: 68 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 |||||||| |||||||||||||||||| |||||||||| || |||| ||||||||| Sbjct: 86883 aagggaac-----ccaccggagccgtagcgagagcgagtcttcatggggcaattgtcact 86937 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 86938 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 86997 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 86998 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 87057 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87058 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 87117 Query: 308 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 ||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||||||| Sbjct: 87118 gactggaccatctaggggtaaagcactgtttcggtacgggccgcgagagcggtaccaaat 87177 Query: 367 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 426 |||||||||||||||||||||||| || ||| ||||| |||||| | |||| ||||| Sbjct: 87178 cgaggcaaactctgaatactagat-tgcccc---aataaaaggggtaagggtcaaccagt 87233 Query: 427 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 486 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 87234 gagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaagg 87293 Query: 487 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 546 ||||||||||||||||||||||| ||||| || | |||||||||||||||||||||||| Sbjct: 87294 cccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccaggaggtttg 87353 Query: 547 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 606 |||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 87354 cctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc 87413 Query: 607 tgaagat 613 |||||| Sbjct: 87414 cgaagat 87420
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 864 bits (436), Expect = 0.0 Identities = 567/608 (93%), Gaps = 7/608 (1%) Strand = Plus / Plus Query: 8 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 67 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||| Sbjct: 560 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggtt 619 Query: 68 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 ||||| || ||||||||||||||||||||||||||||| | |||| ||||||||| Sbjct: 620 aaggggac-----ccaccggagccgtagcgaaagcgagtcttcctggggcaattgtcact 674 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 675 acttatggacccgaacctgggtgatctatccatgaccaggatgaagctcgggtgaaacta 734 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 735 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 794 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 854 Query: 308 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 855 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 914 Query: 367 cgaggcaaactctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccag 425 |||||||||||||||||||||||||||| | |||||| |||| | | |||| |||| Sbjct: 915 cgaggcaaactctgaatactagatatgatctccgaataacgggggataagggtcaaccag 974 Query: 426 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 485 ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 975 tgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaag 1034 Query: 486 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 545 |||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1035 gcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggttt 1094 Query: 546 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 605 |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 1095 gcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 1154 Query: 606 ctgaagat 613 | |||||| Sbjct: 1155 ccgaagat 1162
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 854 bits (431), Expect = 0.0 Identities = 537/567 (94%), Gaps = 9/567 (1%) Strand = Plus / Plus Query: 51 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 109 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 110 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 167 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 168 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 227 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 788 Query: 228 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc-gaa 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 789 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaa 848 Query: 287 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 908 Query: 347 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 406 | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 909 ccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataac 968 Query: 407 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 466 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 aagggtcaaggtcggcaagtgagacgatgggggataagcttcatcgtcgagagggaaaca 1028 Query: 467 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 526 |||| ||||||| |||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 1029 gccctgatcacccgctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgc 1088 Query: 527 aaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctca 586 | |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct: 1089 agagacagccaggaggtttg-ctataagcagccacccttgaaagagtgcgtaatagctca 1147 Query: 587 ctgatcgagcgcccttgcgctgaagat 613 |||||||||||| ||||||| |||||| Sbjct: 1148 ctgatcgagcgctcttgcgccgaagat 1174
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 850 bits (429), Expect = 0.0 Identities = 565/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Minus Query: 8 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 67 |||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 145999 gatccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 145940 Query: 68 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 |||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 145939 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 145885 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 145884 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 145825 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 145824 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 145765 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145764 aatgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 145705 Query: 308 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 145704 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 145645 Query: 367 cgaggcaaactctgaatactagatatga--cccaa---aaataacagg-ggtcaaggtcg 420 |||||||||||||||||||||| ||||| |||| ||| |||||| ||| |||||| Sbjct: 145644 cgaggcaaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtca 145585 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 145584 gccagtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccag 145525 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 ||||||||||||||||||||||||||| | |||||||| || ||||| |||||||||||| Sbjct: 145524 ctaaggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagccagga 145465 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 145464 agtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 145405 Query: 601 ttgcgc 606 |||||| Sbjct: 145404 ttgcgc 145399 Score = 850 bits (429), Expect = 0.0 Identities = 565/606 (93%), Gaps = 12/606 (1%) Strand = Plus / Plus Query: 8 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 67 |||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 112463 gatccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 112522 Query: 68 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 |||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 112523 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 112577 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 112578 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 112637 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 112638 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 112697 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112698 aatgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 112757 Query: 308 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 112758 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 112817 Query: 367 cgaggcaaactctgaatactagatatga--cccaa---aaataacagg-ggtcaaggtcg 420 |||||||||||||||||||||| ||||| |||| ||| |||||| ||| |||||| Sbjct: 112818 cgaggcaaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtca 112877 Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 112878 gccagtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccag 112937 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 ||||||||||||||||||||||||||| | |||||||| || ||||| |||||||||||| Sbjct: 112938 ctaaggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagccagga 112997 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 112998 agtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 113057 Query: 601 ttgcgc 606 |||||| Sbjct: 113058 ttgcgc 113063
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 841 bits (424), Expect = 0.0 Identities = 564/607 (92%), Gaps = 9/607 (1%) Strand = Plus / Plus Query: 8 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 67 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 88909 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggtt 88968 Query: 68 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 |||||||| |||||||||||||||||| |||||||||| || |||| ||||||||| Sbjct: 88969 aagggaac-----ccaccggagccgtagcgagagcgagtcttcatggggcaattgtcact 89023 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 89024 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 89083 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 89084 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 89143 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89144 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 89203 Query: 308 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 ||||||| ||||||||||||||||||||||||||| ||||| || |||||||||||||| Sbjct: 89204 gactggaccatctaggggtaaagcactgtttcggtacgggccacgagagcggtaccaaat 89263 Query: 367 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 426 |||||||||||||||||||||||| | ||||| | || ||||| | |||| ||||| Sbjct: 89264 cgaggcaaactctgaatactagat-taccccaata--aaagggggtaagggtcaaccagt 89320 Query: 427 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 486 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 89321 gagacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaagg 89380 Query: 487 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 546 ||||||||||||||||||||||| ||||| || | |||||||||||||||||||||||| Sbjct: 89381 cccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccaggaggtttg 89440 Query: 547 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 606 |||||||||||||| |||| |||||||||||||||||||||||||||||||| | ||||| Sbjct: 89441 cctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcgtgcgc 89500 Query: 607 tgaagat 613 |||||| Sbjct: 89501 cgaagat 89507
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 831 bits (419), Expect = 0.0 Identities = 425/427 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 368 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 367 cttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 308 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 248 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 188 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 128 Query: 301 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127 agcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggta 68 Query: 361 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 ccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcg 8 Query: 421 gccagtg 427 ||||||| Sbjct: 7 gccagtg 1
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 825 bits (416), Expect = 0.0 Identities = 549/592 (92%), Gaps = 6/592 (1%) Strand = Plus / Minus Query: 8 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 67 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 127881 gatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggtt 127822 Query: 68 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 |||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 127821 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 127767 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 127766 gctcatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaacta 127707 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 127706 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 127647 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127646 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 127587 Query: 308 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 ||| |||| | |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 127586 gaccggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaat 127527 Query: 367 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 426 |||||||||||||||||||||| |||||||| || ||| ||| | |||| ||||| Sbjct: 127526 cgaggcaaactctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagt 127467 Query: 427 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 486 |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||| Sbjct: 127466 gagacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaagg 127407 Query: 487 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 546 |||||||||||| |||||||| |||||||||| || |||||||||||||||||||||||| Sbjct: 127406 cccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttg 127347 Query: 547 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 598 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 127346 cctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgc 127295 Score = 825 bits (416), Expect = 0.0 Identities = 549/592 (92%), Gaps = 6/592 (1%) Strand = Plus / Plus Query: 8 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 67 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 95566 gatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggtt 95625 Query: 68 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 |||||||| ||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 95626 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 95680 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 95681 gctcatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaacta 95740 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95741 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 95800 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95801 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 95860 Query: 308 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 ||| |||| | |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 95861 gaccggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaat 95920 Query: 367 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 426 |||||||||||||||||||||| |||||||| || ||| ||| | |||| ||||| Sbjct: 95921 cgaggcaaactctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagt 95980 Query: 427 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 486 |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||| Sbjct: 95981 gagacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaagg 96040 Query: 487 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 546 |||||||||||| |||||||| |||||||||| || |||||||||||||||||||||||| Sbjct: 96041 cccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttg 96100 Query: 547 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 598 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 96101 cctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgc 96152
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 817 bits (412), Expect = 0.0 Identities = 561/608 (92%), Gaps = 7/608 (1%) Strand = Plus / Plus Query: 8 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 67 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 564 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 623 Query: 68 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 |||||||| |||||||||||||||||||||| |||||| | |||| ||||||||| Sbjct: 624 aagggaac-----ccaccggagccgtagcgaaagcaagtcttcctggggcaattgtcact 678 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 679 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 738 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 739 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 798 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 799 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 858 Query: 308 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 |||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 859 gactagactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 918 Query: 367 cgaggcaaactctgaatactagatatgacccaaaaataacag-gggtcaaggtcggccag 425 |||||||||||||||||||| |||| ||| | ||||| || | || | |||| |||| Sbjct: 919 cgaggcaaactctgaatactggataggactccctaataatagagagtaagggtcaaccag 978 Query: 426 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 485 |||||| ||||||||||||||||| |||||||||| |||||||| ||||||| |||||| Sbjct: 979 tgagacagtgggggataagcttcattgtcgagaggggaacagcccagatcaccggctaag 1038 Query: 486 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 545 ||||||||||||||||| |||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1039 gcccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggttt 1098 Query: 546 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcg 605 ||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||||| Sbjct: 1099 gcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcg 1158 Query: 606 ctgaagat 613 | |||||| Sbjct: 1159 ccgaagat 1166
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 747 bits (377), Expect = 0.0 Identities = 422/437 (96%), Gaps = 5/437 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 46992 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46993 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 47052 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47053 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 47112 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 47113 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 47172 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 47173 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 47232 Query: 431 cgatgggggataagctt 447 ||||||||||||||||| Sbjct: 47233 cgatgggggataagctt 47249
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 743 bits (375), Expect = 0.0 Identities = 433/451 (96%), Gaps = 6/451 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364743 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 364802 Query: 71 ggaacggaacccaccggagccgtagcgaaag-cgagtcttaatagggcgattgtcactgc 129 ||||| ||||||||||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 364803 ggaac-----ccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgc 364857 Query: 130 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 189 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 364858 ttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 364917 Query: 190 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 249 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 364918 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 364977 Query: 250 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364978 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 365037 Query: 310 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 369 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 365038 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 365097 Query: 370 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 429 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 365098 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 365157 Query: 430 acgatgggggataagcttcatcgtcgagagg 460 ||| ||||||||||||||||||||||||||| Sbjct: 365158 acggtgggggataagcttcatcgtcgagagg 365188 Score = 198 bits (100), Expect = 2e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 455 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 514 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 515 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 573 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 574 gcgtaatagctcactg 589 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 530 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 452 gtcgagagggaaacagcccggatc 475 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 710 bits (358), Expect = 0.0 Identities = 541/598 (90%), Gaps = 8/598 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 ||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaagt 740 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 800 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||| || |||||| |||||| ||||||||||||||||||||| |||||||| |||| || Sbjct: 801 gccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt-ac 859 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||| |||| ||| |||| ||||||||| ||| Sbjct: 860 cagacatctaggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattgag 919 Query: 371 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 428 ||||||| ||||||||||||||||| ||||||||||||||| | ||||| | ||||||| Sbjct: 920 gcaaactatgaatactagatatgacctccaaaaataacagggataaaggtggaccagtga 979 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 ||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 980 gaccatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcc 1039 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 |||||||||||||| ||| ||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 1040 cctaaatgaccgctaagttataaaggaggtaggggtgcatagacaaccaggaggtttgcc 1099 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 606 |||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 1100 tagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgctcttgcgc 1157
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 680 bits (343), Expect = 0.0 Identities = 533/594 (89%), Gaps = 8/594 (1%) Strand = Plus / Minus Query: 8 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 67 ||||||||||||||||||||||||||||||||||||||||| |||||| | ||| ||||| Sbjct: 138708 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggtt 138649 Query: 68 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 |||||||| ||||||||||||||||||||||||||||| ||||| | |||| || Sbjct: 138648 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgct 138594 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | Sbjct: 138593 gcttatggacccgaacccgggtgatctatccatgaccaggatgaagcttggatagaacca 138534 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 | ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 138533 ggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtga 138474 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 138473 aatgccactcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 138414 Query: 308 gact-ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 |||| || | || | |||||||||||||| |||||||||||||| |||| |||||||| Sbjct: 138413 gactaggctacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaac 138354 Query: 367 cgaggcaaactctgaatactagatatgacccaaaaataaca--ggggtcaaggtcggcca 424 |||||||||||||||||||| | |||| ||| | | | ||| |||| ||||||||||| Sbjct: 138353 cgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaaggtcggcca 138294 Query: 425 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 484 |||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 138293 gtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaa 138234 Query: 485 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 544 ||||||| ||||||||||||||| | |||||||| || |||||||||||||| ||||||| Sbjct: 138233 ggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagccgggaggtt 138174 Query: 545 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 598 |||| |||||||||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 138173 tgcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaagcgc 138120 Score = 680 bits (343), Expect = 0.0 Identities = 533/594 (89%), Gaps = 8/594 (1%) Strand = Plus / Plus Query: 8 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 67 ||||||||||||||||||||||||||||||||||||||||| |||||| | ||| ||||| Sbjct: 83169 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggtt 83228 Query: 68 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 |||||||| ||||||||||||||||||||||||||||| ||||| | |||| || Sbjct: 83229 aagggaac-----ccaccggagccgtagcgaaagcgagtcttcccagggcaactgtcgct 83283 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | Sbjct: 83284 gcttatggacccgaacccgggtgatctatccatgaccaggatgaagcttggatagaacca 83343 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 | ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 83344 ggtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtga 83403 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 83404 aatgccactcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 83463 Query: 308 gact-ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 |||| || | || | |||||||||||||| |||||||||||||| |||| |||||||| Sbjct: 83464 gactaggctacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaac 83523 Query: 367 cgaggcaaactctgaatactagatatgacccaaaaataaca--ggggtcaaggtcggcca 424 |||||||||||||||||||| | |||| ||| | | | ||| |||| ||||||||||| Sbjct: 83524 cgaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaaggtcggcca 83583 Query: 425 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 484 |||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 83584 gtgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaa 83643 Query: 485 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 544 ||||||| ||||||||||||||| | |||||||| || |||||||||||||| ||||||| Sbjct: 83644 ggcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagccgggaggtt 83703 Query: 545 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 598 |||| |||||||||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 83704 tgcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaagcgc 83757
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 622 bits (314), Expect = e-175 Identities = 365/382 (95%), Gaps = 5/382 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4791 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 4850 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 4851 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 4905 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 4906 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagt 4965 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 4966 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5025 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5026 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5085 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5086 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5145 Query: 371 gcaaactctgaatactagatat 392 |||||||||||||||||||||| Sbjct: 5146 gcaaactctgaatactagatat 5167 Score = 327 bits (165), Expect = 2e-86 Identities = 189/197 (95%) Strand = Plus / Plus Query: 417 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 477 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 536 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301 Query: 537 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 596 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5302 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 5361 Query: 597 gcccttgcgctgaagat 613 || ||||||| |||||| Sbjct: 5362 gctcttgcgccgaagat 5378
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 622 bits (314), Expect = e-175 Identities = 365/382 (95%), Gaps = 5/382 (1%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23134 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 23075 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 23074 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 23020 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 23019 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagt 22960 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 22959 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 22900 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22899 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 22840 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 22839 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 22780 Query: 371 gcaaactctgaatactagatat 392 |||||||||||||||||||||| Sbjct: 22779 gcaaactctgaatactagatat 22758 Score = 327 bits (165), Expect = 2e-86 Identities = 189/197 (95%) Strand = Plus / Minus Query: 417 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 477 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 536 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624 Query: 537 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 596 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22623 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 22564 Query: 597 gcccttgcgctgaagat 613 || ||||||| |||||| Sbjct: 22563 gctcttgcgccgaagat 22547
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%), Gaps = 5/387 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5119 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 5173 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5174 tatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagt 5233 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5234 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5293 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5294 gccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5353 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5354 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5413 Query: 371 gcaaactctgaatactagatatgaccc 397 ||||||||||||||||||||||||||| Sbjct: 5414 gcaaactctgaatactagatatgaccc 5440 Score = 329 bits (166), Expect = 6e-87 Identities = 197/206 (95%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 409 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 467 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 468 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 527 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 528 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 587 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 588 tgatcgagcgcccttgcgctgaagat 613 ||||||||||| ||||||| |||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagat 5650
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%), Gaps = 5/387 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5119 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 5173 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5174 tatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagt 5233 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5234 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5293 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5294 gccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5353 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5354 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5413 Query: 371 gcaaactctgaatactagatatgaccc 397 ||||||||||||||||||||||||||| Sbjct: 5414 gcaaactctgaatactagatatgaccc 5440 Score = 329 bits (166), Expect = 6e-87 Identities = 197/206 (95%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 409 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 467 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 468 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 527 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 528 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 587 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 588 tgatcgagcgcccttgcgctgaagat 613 ||||||||||| ||||||| |||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagat 5650
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 613 bits (309), Expect = e-172 Identities = 364/381 (95%), Gaps = 6/381 (1%) Strand = Plus / Minus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 115650 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 115591 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 ||||| | ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 115590 agggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactg 115536 Query: 129 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 188 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 115535 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 115476 Query: 189 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 248 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115475 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 115416 Query: 249 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115415 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 115356 Query: 309 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 367 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 115355 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 115296 Query: 368 gaggcaaactctgaatactag 388 ||||||||||||||||||||| Sbjct: 115295 gaggcaaactctgaatactag 115275 Score = 613 bits (309), Expect = e-172 Identities = 364/381 (95%), Gaps = 6/381 (1%) Strand = Plus / Plus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 86470 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 86529 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 ||||| | ||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 86530 agggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtcactg 86584 Query: 129 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 188 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 86585 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 86644 Query: 189 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 248 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86645 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 86704 Query: 249 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86705 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 86764 Query: 309 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 367 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 86765 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 86824 Query: 368 gaggcaaactctgaatactag 388 ||||||||||||||||||||| Sbjct: 86825 gaggcaaactctgaatactag 86845 Score = 289 bits (146), Expect = 5e-75 Identities = 185/198 (93%) Strand = Plus / Minus Query: 416 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 475 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 476 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 535 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 536 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 115126 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 115067 Query: 596 cgcccttgcgctgaagat 613 ||| ||||||| |||||| Sbjct: 115066 cgctcttgcgccgaagat 115049 Score = 289 bits (146), Expect = 5e-75 Identities = 185/198 (93%) Strand = Plus / Plus Query: 416 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 475 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 476 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 535 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 536 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 86994 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 87053 Query: 596 cgcccttgcgctgaagat 613 ||| ||||||| |||||| Sbjct: 87054 cgctcttgcgccgaagat 87071
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 8 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 67 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 4449 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 4508 Query: 68 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 4509 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 4563 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4564 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 4623 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4624 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 4683 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4684 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 4743 Query: 308 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 4744 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 4803 Query: 367 cgaggcaaactctgaatactagatatg 393 |||||||||||||||||||||| |||| Sbjct: 4804 cgaggcaaactctgaatactaggtatg 4830 Score = 297 bits (150), Expect = 2e-77 Identities = 186/198 (93%) Strand = Plus / Plus Query: 416 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 475 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 476 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 535 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 536 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 4978 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 5037 Query: 596 cgcccttgcgctgaagat 613 ||| ||||||| |||||| Sbjct: 5038 cgctcttgcgccgaagat 5055
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 8 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 67 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 559 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 618 Query: 68 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 619 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 673 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 674 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 733 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 734 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 793 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 853 Query: 308 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 854 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 913 Query: 367 cgaggcaaactctgaatactagatatg 393 |||||||||||||||||||||| |||| Sbjct: 914 cgaggcaaactctgaatactaggtatg 940 Score = 297 bits (150), Expect = 2e-77 Identities = 186/198 (93%) Strand = Plus / Plus Query: 416 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 475 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 476 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 535 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 536 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 596 cgcccttgcgctgaagat 613 ||| ||||||| |||||| Sbjct: 1148 cgctcttgcgccgaagat 1165
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Minus Query: 8 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 67 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 150686 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 150627 Query: 68 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 150626 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 150572 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 150571 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 150512 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 150511 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 150452 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150451 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 150392 Query: 308 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 150391 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 150332 Query: 367 cgaggcaaactctgaatactagatatg 393 |||||||||||||||||||||| |||| Sbjct: 150331 cgaggcaaactctgaatactaggtatg 150305 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 8 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 67 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 117980 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 118039 Query: 68 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 118040 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 118094 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 118095 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 118154 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 118155 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 118214 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118215 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 118274 Query: 308 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 118275 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 118334 Query: 367 cgaggcaaactctgaatactagatatg 393 |||||||||||||||||||||| |||| Sbjct: 118335 cgaggcaaactctgaatactaggtatg 118361 Score = 297 bits (150), Expect = 2e-77 Identities = 186/198 (93%) Strand = Plus / Minus Query: 416 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 475 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 476 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 535 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 536 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 150157 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 150098 Query: 596 cgcccttgcgctgaagat 613 ||| ||||||| |||||| Sbjct: 150097 cgctcttgcgccgaagat 150080 Score = 297 bits (150), Expect = 2e-77 Identities = 186/198 (93%) Strand = Plus / Plus Query: 416 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 475 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 476 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 535 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 536 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 118509 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 118568 Query: 596 cgcccttgcgctgaagat 613 ||| ||||||| |||||| Sbjct: 118569 cgctcttgcgccgaagat 118586
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 609 bits (307), Expect = e-171 Identities = 368/387 (95%), Gaps = 6/387 (1%) Strand = Plus / Plus Query: 8 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 67 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 559 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 618 Query: 68 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 ||||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 619 aagggaatt-----caccggagccgtagcgaaagcgagtcttcctagggcaattgtcact 673 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 674 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 733 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 734 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 793 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 853 Query: 308 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 854 gactggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 913 Query: 367 cgaggcaaactctgaatactagatatg 393 |||||||||||||||||||||| |||| Sbjct: 914 cgaggcaaactctgaatactaggtatg 940 Score = 297 bits (150), Expect = 2e-77 Identities = 186/198 (93%) Strand = Plus / Plus Query: 416 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 475 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 476 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 535 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 536 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 596 cgcccttgcgctgaagat 613 ||| ||||||| |||||| Sbjct: 1148 cgctcttgcgccgaagat 1165
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 591 bits (298), Expect = e-165 Identities = 365/385 (94%), Gaps = 3/385 (0%) Strand = Plus / Plus Query: 8 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 67 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 543 gatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtt 602 Query: 68 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 ||||||| | | ||||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct: 603 aagggaaagaa--ccaccggagccatagcgaaagcgagtcttcccagggcaattgtcact 660 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 661 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 720 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 721 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 780 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 781 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcaacagtt 840 Query: 308 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 |||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct: 841 gactggactatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaat 900 Query: 367 cgaggcaaactctgaatactagata 391 |||||||||||||||||||| |||| Sbjct: 901 cgaggcaaactctgaatactggata 925 Score = 278 bits (140), Expect = 2e-71 Identities = 179/192 (93%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggag 1074 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 601 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1075 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctct 1134 Query: 602 tgcgctgaagat 613 ||||| |||||| Sbjct: 1135 tgcgccgaagat 1146
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 589 bits (297), Expect = e-165 Identities = 336/349 (96%), Gaps = 5/349 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 149 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 150 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 204 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 205 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 264 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 324 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 325 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 384 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 359 ||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 385 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggt 433
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 581 bits (293), Expect = e-162 Identities = 405/441 (91%), Gaps = 1/441 (0%) Strand = Plus / Minus Query: 164 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 223 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 224 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 283 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 284 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 343 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 344 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 403 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 404 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 463 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 464 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 523 ||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgataaaggaggtagggg 2753 Query: 524 tgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagc 583 ||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| Sbjct: 2752 tgcaaagacagccaggaggtttgcctagaagcaaccacccttgaaaaagtgcgtaatagc 2693 Query: 584 tcactgatcgagcgcccttgc 604 ||||| ||||||||| ||||| Sbjct: 2692 tcactaatcgagcgcacttgc 2672 Score = 157 bits (79), Expect = 5e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 131 tatggacccgaacct 145 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 569 bits (287), Expect = e-159 Identities = 323/335 (96%), Gaps = 5/335 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 145 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 146 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 200 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 201 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 260 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 320 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 321 gccactcgaacccagagctagctggctctccccgaaatgcgttgaggcgcagcggttgac 380 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgg 345 ||||||||||||||||||||||||||||||||||| Sbjct: 381 tggacatctaggggtaaagcactgtttcggtgcgg 415
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 557 bits (281), Expect = e-155 Identities = 287/289 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75148 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 75089 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 75088 cttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 75029 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75028 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 74969 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74968 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 74909 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 289 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74908 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 74860 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 530 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 401437 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 401496 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 452 gtcgagagggaaacagcccggatc 475 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 557 bits (281), Expect = e-155 Identities = 287/289 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382390 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 382449 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 382450 cttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 382509 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382510 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 382569 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382570 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 382629 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 289 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382630 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 382678 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 530 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 282982 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 282923 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 530 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 154290 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 154231 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 452 gtcgagagggaaacagcccggatc 475 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 452 gtcgagagggaaacagcccggatc 475 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 557 bits (281), Expect = e-155 Identities = 287/289 (99%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113239 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 113180 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 113179 cttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 113120 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113119 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 113060 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113059 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 113000 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 289 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112999 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 112951 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 530 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 294071 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 294130 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 452 gtcgagagggaaacagcccggatc 475 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 557 bits (281), Expect = e-155 Identities = 290/293 (98%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367921 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 367862 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 367861 cttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 367802 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367801 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 367742 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367741 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 367682 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 293 |||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 367681 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgtt 367629 Score = 557 bits (281), Expect = e-155 Identities = 290/293 (98%) Strand = Plus / Minus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184526 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 184467 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 184466 cttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 184407 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184406 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 184347 Query: 181 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184346 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 184287 Query: 241 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgtt 293 |||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 184286 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaattcgtt 184234 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 530 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 266906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 266965 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 452 gtcgagagggaaacagcccggatc 475 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 523 bits (264), Expect = e-145 Identities = 357/384 (92%), Gaps = 3/384 (0%) Strand = Plus / Plus Query: 8 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 67 ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 144479 gatctctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggtt 144538 Query: 68 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 ||||| | ||||| |||||||||||||||||||||||||| | |||| |||||||| Sbjct: 144539 aagggggag-aaccc-ccggagccgtagcgaaagcgagtcttgctggggcaattgtcacc 144596 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 144597 gcttataaacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 144656 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 144657 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 144716 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144717 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 144776 Query: 308 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 |||| || |||||||||||||||||| ||| |||||||||||||| |||||||||||||| Sbjct: 144777 gactagaccatctaggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaat 144836 Query: 367 cgaggcaaactctgaatactagat 390 |||||||||||||||||||||||| Sbjct: 144837 cgaggcaaactctgaatactagat 144860 Score = 523 bits (264), Expect = e-145 Identities = 357/384 (92%), Gaps = 3/384 (0%) Strand = Plus / Minus Query: 8 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtt 67 ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||| Sbjct: 88372 gatctctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggtt 88313 Query: 68 aagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 ||||| | ||||| |||||||||||||||||||||||||| | |||| |||||||| Sbjct: 88312 aagggggag-aaccc-ccggagccgtagcgaaagcgagtcttgctggggcaattgtcacc 88255 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 88254 gcttataaacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaacta 88195 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 88194 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtga 88135 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88134 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 88075 Query: 308 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 |||| || |||||||||||||||||| ||| |||||||||||||| |||||||||||||| Sbjct: 88074 gactagaccatctaggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaat 88015 Query: 367 cgaggcaaactctgaatactagat 390 |||||||||||||||||||||||| Sbjct: 88014 cgaggcaaactctgaatactagat 87991 Score = 293 bits (148), Expect = 3e-76 Identities = 181/192 (94%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 145018 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 601 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 145019 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 145078 Query: 602 tgcgctgaagat 613 ||||| |||||| Sbjct: 145079 tgcgccgaagat 145090 Score = 293 bits (148), Expect = 3e-76 Identities = 181/192 (94%) Strand = Plus / Minus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 87833 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 601 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 87832 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 87773 Query: 602 tgcgctgaagat 613 ||||| |||||| Sbjct: 87772 tgcgccgaagat 87761
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 521 bits (263), Expect = e-145 Identities = 359/387 (92%), Gaps = 8/387 (2%) Strand = Plus / Minus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 |||| || |||||||||||||||||| |||||||||| ||||||| |||||||||| Sbjct: 5927 agggcac-----ccaccggagccgtagcgagagcgagtcttcatagggcaattgtcactg 5873 Query: 129 ctt-atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5872 ctttatggacccgaacctgggtgatctatccatgaccaggatgaagct-ggatgaaacta 5814 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 || |||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 5813 agtagaggtccgaaccgactgatgttgcaaaatcagcggatgagttgtggttaggggtga 5754 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5753 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 5694 Query: 308 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 ||||||| | ||||||||||||||||||||||||| ||| | | |||||||| | || Sbjct: 5693 gactggaccgtctaggggtaaagcactgtttcggtataggccgtgtaagcggtacgacat 5634 Query: 367 cgaggcaaactctgaatactagatatg 393 ||||||||||| ||||||||||||||| Sbjct: 5633 cgaggcaaactatgaatactagatatg 5607 Score = 258 bits (130), Expect = 2e-65 Identities = 181/198 (91%) Strand = Plus / Minus Query: 416 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 475 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 476 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 535 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 536 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 5482 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 5423 Query: 596 cgcccttgcgctgaagat 613 ||| ||||| | |||||| Sbjct: 5422 cgctcttgcaccgaagat 5405
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 513 bits (259), Expect = e-142 Identities = 508/587 (86%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 371 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 428 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcc 1075 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1076 tagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 513 bits (259), Expect = e-142 Identities = 508/587 (86%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 371 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 428 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcc 1075 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1076 tagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 513 bits (259), Expect = e-142 Identities = 508/587 (86%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 371 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 428 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcc 1075 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1076 tagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 513 bits (259), Expect = e-142 Identities = 508/587 (86%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 371 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 428 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcc 1074 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1075 tagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1121
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 513 bits (259), Expect = e-142 Identities = 508/587 (86%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 371 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 428 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcc 1075 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1076 tagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 513 bits (259), Expect = e-142 Identities = 508/587 (86%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 371 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 428 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcc 1075 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1076 tagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 513 bits (259), Expect = e-142 Identities = 508/587 (86%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 371 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 428 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcc 1075 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1076 tagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 513 bits (259), Expect = e-142 Identities = 508/587 (86%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 371 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 428 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcc 1075 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1076 tagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 513 bits (259), Expect = e-142 Identities = 508/587 (86%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 371 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 428 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcc 1075 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1076 tagaaggagccaccttttaaagagtgcgtaatagctaactgatcgag 1122
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 505 bits (255), Expect = e-140 Identities = 507/587 (86%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 371 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 428 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcc 1075 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||| |||||| ||||||||||||||||||||| |||||||||| Sbjct: 1076 tagaagaggccaccttttaaagagtgcgtaatagctaactgatcgag 1122
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 505 bits (255), Expect = e-140 Identities = 507/587 (86%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 371 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 428 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcc 1074 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1075 tagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1121
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 505 bits (255), Expect = e-140 Identities = 507/587 (86%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 371 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 428 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | ||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagcttgcc 1075 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1076 tagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 505 bits (255), Expect = e-140 Identities = 508/587 (86%), Gaps = 9/587 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gtt-ac 834 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 371 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 428 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcc 1074 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1075 tagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1121
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 505 bits (255), Expect = e-140 Identities = 507/587 (86%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 | || ||||||||| |||||||||||||||||||||||||||| ||||| || ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgtt-ac 835 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 371 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 428 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcc 1075 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1076 tagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 504 bits (254), Expect = e-139 Identities = 254/254 (100%) Strand = Plus / Minus Query: 360 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 420 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 480 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 340 Query: 540 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 280 Query: 600 cttgcgctgaagat 613 |||||||||||||| Sbjct: 279 cttgcgctgaagat 266
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 498 bits (251), Expect = e-137 Identities = 506/587 (86%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || | Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtatcc 836 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 | || ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 837 ag-acctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 371 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 428 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 429 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 488 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 489 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 548 ||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcc 1075 Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1076 tagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 498 bits (251), Expect = e-137 Identities = 291/303 (96%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 371 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 430 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 431 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 491 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 550 ||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 497 taaatgatcgctcagtgataaaggaggtaggggtgc-gagacagccaggaggtttgccta 555 Query: 551 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 610 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 556 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 615 Query: 611 gat 613 ||| Sbjct: 616 gat 618 Score = 420 bits (212), Expect = e-114 Identities = 267/284 (94%), Gaps = 6/284 (2%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 69 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 70 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 129 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 130 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 189 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 194 Query: 190 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 254 Query: 250 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 293 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 298
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 492 bits (248), Expect = e-136 Identities = 417/471 (88%), Gaps = 3/471 (0%) Strand = Plus / Plus Query: 127 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 186 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 187 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 246 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 247 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 306 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 307 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 367 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 424 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 425 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 484 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 485 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 544 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 545 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 71 gg 72 || Sbjct: 602 gg 603
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 488 bits (246), Expect = e-134 Identities = 276/286 (96%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 594 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 595 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 649 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 650 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 709 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 769 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgag 296 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 gccactcgaacccagagctagctggttctccccgaaatgcgttgag 815
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 484 bits (244), Expect = e-133 Identities = 349/381 (91%), Gaps = 6/381 (1%) Strand = Plus / Plus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 560 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 619 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 ||| | ||| || |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 620 aggcga--gaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgtcactg 674 Query: 129 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 188 |||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| | || Sbjct: 675 cttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagccaa 734 Query: 189 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 248 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 735 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 794 Query: 249 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 795 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 854 Query: 309 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 367 ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 855 actggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 914 Query: 368 gaggcaaactctgaatactag 388 ||||||||||||||||||||| Sbjct: 915 gaggcaaactctgaatactag 935 Score = 297 bits (150), Expect = 2e-77 Identities = 186/198 (93%) Strand = Plus / Plus Query: 416 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 475 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 476 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 535 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 536 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1066 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1125 Query: 596 cgcccttgcgctgaagat 613 ||| ||||||| |||||| Sbjct: 1126 cgctcttgcgccgaagat 1143
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 484 bits (244), Expect = e-133 Identities = 349/381 (91%), Gaps = 6/381 (1%) Strand = Plus / Plus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 573 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 632 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 ||| | ||| || |||||||||||||||||||||||| |||||||| |||||||| Sbjct: 633 aggcga--gaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgtcactg 687 Query: 129 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 188 |||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| | || Sbjct: 688 cttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagccaa 747 Query: 189 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 248 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 748 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 807 Query: 249 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 808 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 867 Query: 309 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 367 ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 868 actggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 927 Query: 368 gaggcaaactctgaatactag 388 ||||||||||||||||||||| Sbjct: 928 gaggcaaactctgaatactag 948 Score = 297 bits (150), Expect = 2e-77 Identities = 186/198 (93%) Strand = Plus / Plus Query: 416 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 475 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 476 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 535 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 536 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1079 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1138 Query: 596 cgcccttgcgctgaagat 613 ||| ||||||| |||||| Sbjct: 1139 cgctcttgcgccgaagat 1156
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 480 bits (242), Expect = e-132 Identities = 350/382 (91%), Gaps = 8/382 (2%) Strand = Plus / Plus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 677 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggtta 736 Query: 69 agggaacg-gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcact 127 ||| || ||| || |||||||||||||||||||||||| |||||||| ||||||| Sbjct: 737 agg---cgtgaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgtcact 790 Query: 128 gcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 187 ||||||||||||||||| |||||||||| ||||| ||||| |||||||||| |||| | | Sbjct: 791 gcttatggacccgaacccgggtgatctaaccatggccagggtgaagcttgggtgaagcca 850 Query: 188 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 247 || ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 851 agtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtga 910 Query: 248 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 307 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 911 aatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtt 970 Query: 308 gactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 971 gactggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaat 1030 Query: 367 cgaggcaaactctgaatactag 388 |||||||||||||||||||||| Sbjct: 1031 cgaggcaaactctgaatactag 1052 Score = 289 bits (146), Expect = 5e-75 Identities = 185/198 (93%) Strand = Plus / Plus Query: 416 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 475 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 476 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 535 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 536 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1183 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1242 Query: 596 cgcccttgcgctgaagat 613 ||| ||||||| |||||| Sbjct: 1243 cgctcttgcgccgaagat 1260
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 73 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 74 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 133 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 134 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 193 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 740 Query: 194 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 253 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 254 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 313 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 314 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 372 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 373 aaactctgaatactagatatg 393 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 200 bits (101), Expect = 4e-48 Identities = 170/193 (88%) Strand = Plus / Plus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 601 ttgcgctgaagat 613 |||||| |||||| Sbjct: 1131 ttgcgccgaagat 1143
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 73 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 74 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 133 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 134 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 193 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 3715 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 3774 Query: 194 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 253 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3775 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 3834 Query: 254 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 313 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 3835 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 3894 Query: 314 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 372 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 3895 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 3954 Query: 373 aaactctgaatactagatatg 393 ||||||||||||||| ||||| Sbjct: 3955 aaactctgaatactaaatatg 3975 Score = 200 bits (101), Expect = 4e-48 Identities = 170/193 (88%) Strand = Plus / Plus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 4104 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 4105 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 4164 Query: 601 ttgcgctgaagat 613 |||||| |||||| Sbjct: 4165 ttgcgccgaagat 4177
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 621 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 622 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 675 Query: 129 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 188 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||||| || Sbjct: 676 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaaaccaa 735 Query: 189 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 248 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 795 Query: 249 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 796 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 855 Query: 309 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 367 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 856 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 915 Query: 368 gaggcaaactctgaatactag 388 ||||||||||||||||||||| Sbjct: 916 gaggcaaactctgaatactag 936 Score = 280 bits (141), Expect = 5e-72 Identities = 180/193 (93%) Strand = Plus / Plus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 1072 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1132 Query: 601 ttgcgctgaagat 613 |||||| |||||| Sbjct: 1133 ttgcgccgaagat 1145
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 476 bits (240), Expect = e-131 Identities = 351/385 (91%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 579 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataagtagtggcctggttaag 638 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 | |||| ||||||||||| |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 639 g----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggcaaatgtcattgct 693 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||| |||||||| ||||||||||| |||||||||||||||| |||| |||||||||| Sbjct: 694 tatgtacccgaacttgggtgatctaaccatgaccaggatgaaatttggttgaaactaagt 753 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 813 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||| ||||||||| |||||||||||||||||||||||||||| ||| ||||||||| || Sbjct: 814 gccaatcgaacccaaagctagctggttctccccgaaatgcgtttaggggcagcagtt-ac 872 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||| Sbjct: 873 cggacatctaggggtaaagcactgtttcggtgcgggtctcgagagcggtaccaaattgag 932 Query: 371 gcaaactctgaatactagatatgac 395 ||||||| ||||||||||||||||| Sbjct: 933 gcaaactatgaatactagatatgac 957 Score = 283 bits (143), Expect = 3e-73 Identities = 176/187 (94%) Strand = Plus / Plus Query: 420 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 479 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 480 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 539 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccagg 1119 Query: 540 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 599 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1120 aggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgct 1179 Query: 600 cttgcgc 606 ||||||| Sbjct: 1180 cttgcgc 1186
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 470 bits (237), Expect = e-129 Identities = 347/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 73 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 74 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 133 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 134 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 193 ||||||||||| ||||||||||||||||||||||||||||||||| | |||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaagtgga 740 Query: 194 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 253 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 254 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 313 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 314 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 372 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 373 aaactctgaatactagatatg 393 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 200 bits (101), Expect = 4e-48 Identities = 170/193 (88%) Strand = Plus / Plus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 601 ttgcgctgaagat 613 |||||| |||||| Sbjct: 1131 ttgcgccgaagat 1143
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 468 bits (236), Expect = e-128 Identities = 236/236 (100%) Strand = Plus / Plus Query: 378 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 438 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 498 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 180 Query: 558 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 613 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 236
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 462 bits (233), Expect = e-127 Identities = 346/381 (90%), Gaps = 7/381 (1%) Strand = Plus / Minus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 124703 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 124644 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 124643 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 124590 Query: 129 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 188 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | || Sbjct: 124589 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagccaa 124530 Query: 189 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 248 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 124529 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 124470 Query: 249 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 124469 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 124410 Query: 309 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 367 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 124409 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 124350 Query: 368 gaggcaaactctgaatactag 388 ||| ||||||||||||||||| Sbjct: 124349 gagtcaaactctgaatactag 124329 Score = 462 bits (233), Expect = e-127 Identities = 346/381 (90%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 95163 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggtta 95222 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 |||||| ||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 95223 agggaatt-----caccggagccgtagcgaaagcgagtct-aacagggcgattgtcactg 95276 Query: 129 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 188 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | || Sbjct: 95277 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagccaa 95336 Query: 189 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 248 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 95337 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 95396 Query: 249 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95397 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 95456 Query: 309 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 367 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95457 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 95516 Query: 368 gaggcaaactctgaatactag 388 ||| ||||||||||||||||| Sbjct: 95517 gagtcaaactctgaatactag 95537 Score = 280 bits (141), Expect = 5e-72 Identities = 180/193 (93%) Strand = Plus / Minus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 124193 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 124192 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 124133 Query: 601 ttgcgctgaagat 613 |||||| |||||| Sbjct: 124132 ttgcgccgaagat 124120 Score = 280 bits (141), Expect = 5e-72 Identities = 180/193 (93%) Strand = Plus / Plus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 95673 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 95674 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 95733 Query: 601 ttgcgctgaagat 613 |||||| |||||| Sbjct: 95734 ttgcgccgaagat 95746
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4606 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 4665 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4666 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 4724 Query: 129 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 188 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 4725 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 4784 Query: 189 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 248 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 4785 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 4844 Query: 249 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 4845 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 4904 Query: 309 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 367 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 4905 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 4964 Query: 368 gaggcaaactctgaatact 386 ||||||||||||||||||| Sbjct: 4965 gaggcaaactctgaatact 4983 Score = 234 bits (118), Expect = 3e-58 Identities = 172/190 (90%) Strand = Plus / Plus Query: 424 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 483 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 484 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 543 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 5124 Query: 544 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 603 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 5125 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 5184 Query: 604 cgctgaagat 613 ||| |||||| Sbjct: 5185 cgccgaagat 5194
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 129 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 188 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 692 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 189 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 248 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 752 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 811 Query: 249 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 812 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 871 Query: 309 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 367 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 872 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 931 Query: 368 gaggcaaactctgaatact 386 ||||||||||||||||||| Sbjct: 932 gaggcaaactctgaatact 950 Score = 234 bits (118), Expect = 3e-58 Identities = 172/190 (90%) Strand = Plus / Plus Query: 424 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 483 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 484 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 543 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 1091 Query: 544 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 603 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 604 cgctgaagat 613 ||| |||||| Sbjct: 1152 cgccgaagat 1161
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 442 bits (223), Expect = e-121 Identities = 342/379 (90%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 atctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 632 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 |||||| | || ||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 633 agggaaattatcc-accggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Query: 129 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 188 |||||||||||||| |||||||||| ||||| |||||||||||||||| | ||||||| Sbjct: 692 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaa 751 Query: 189 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 248 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 752 gtggaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 811 Query: 249 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 812 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 871 Query: 309 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 367 |||| || ||| ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 872 actgcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatc 931 Query: 368 gaggcaaactctgaatact 386 ||||||||||||||||||| Sbjct: 932 gaggcaaactctgaatact 950 Score = 226 bits (114), Expect = 7e-56 Identities = 171/190 (90%) Strand = Plus / Plus Query: 424 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 483 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 484 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 543 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggt 1091 Query: 544 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 603 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 604 cgctgaagat 613 ||| |||||| Sbjct: 1152 cgccgaagat 1161
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 420 bits (212), Expect = e-114 Identities = 345/385 (89%), Gaps = 7/385 (1%) Strand = Plus / Plus Query: 7 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 66 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| Sbjct: 557 tgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggt 616 Query: 67 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 126 ||||| | | || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 617 taaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcac 671 Query: 127 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 186 || ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 672 tgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaact 731 Query: 187 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 246 || || |||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 732 cagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtg 791 Query: 247 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 306 |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 792 aaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggt 851 Query: 307 tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaa 364 || | || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 852 tggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaa 911 Query: 365 atcgaggcaaactctgaatactaga 389 ||||| ||||||||||||||||||| Sbjct: 912 atcgatgcaaactctgaatactaga 936 Score = 240 bits (121), Expect = 4e-60 Identities = 169/185 (91%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 1071 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 601 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1072 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 1131 Query: 602 tgcgc 606 ||||| Sbjct: 1132 tgcgc 1136
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 420 bits (212), Expect = e-114 Identities = 345/385 (89%), Gaps = 7/385 (1%) Strand = Plus / Minus Query: 7 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 66 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| Sbjct: 115105 tgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggt 115046 Query: 67 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 126 ||||| | | || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 115045 taaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcac 114991 Query: 127 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 186 || ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 114990 tgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaact 114931 Query: 187 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 246 || || |||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 114930 cagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtg 114871 Query: 247 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 306 |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 114870 aaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggt 114811 Query: 307 tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaa 364 || | || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 114810 tggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaa 114751 Query: 365 atcgaggcaaactctgaatactaga 389 ||||| ||||||||||||||||||| Sbjct: 114750 atcgatgcaaactctgaatactaga 114726 Score = 420 bits (212), Expect = e-114 Identities = 345/385 (89%), Gaps = 7/385 (1%) Strand = Plus / Plus Query: 7 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggt 66 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| Sbjct: 86883 tgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggt 86942 Query: 67 taagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcac 126 ||||| | | || ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 86943 taaggta-caaaa---accggagccatagcgaaagcgagtcttaatagggcgat-gtcac 86997 Query: 127 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 186 || ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| Sbjct: 86998 tgtctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaact 87057 Query: 187 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 246 || || |||||||||||| ||||||||| |||| |||||||||||||||||||||||| Sbjct: 87058 cagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtg 87117 Query: 247 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 306 |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||| || Sbjct: 87118 aaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggt 87177 Query: 307 tgact--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaa 364 || | || ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 87178 tggatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaa 87237 Query: 365 atcgaggcaaactctgaatactaga 389 ||||| ||||||||||||||||||| Sbjct: 87238 atcgatgcaaactctgaatactaga 87262 Score = 240 bits (121), Expect = 4e-60 Identities = 169/185 (91%) Strand = Plus / Minus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 114591 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 601 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 114590 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 114531 Query: 602 tgcgc 606 ||||| Sbjct: 114530 tgcgc 114526 Score = 240 bits (121), Expect = 4e-60 Identities = 169/185 (91%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 87397 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 601 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 87398 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 87457 Query: 602 tgcgc 606 ||||| Sbjct: 87458 tgcgc 87462
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 420 bits (212), Expect = e-114 Identities = 343/384 (89%), Gaps = 2/384 (0%) Strand = Plus / Plus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 568 atctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatagtggctgggtta 627 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 |||||| | | || |||||| |||||||||| |||||| ||||| |||||||||| Sbjct: 628 agggaatttatgc-actggagccatagcgaaagcaagtcttttcagggctattgtcactg 686 Query: 129 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 188 |||||||||||||| |||||||||| ||||| |||||||||||||||| ||||||||| Sbjct: 687 tctatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgaaactaa 746 Query: 189 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 248 | ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||| Sbjct: 747 gtggaggtcccaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaa 806 Query: 249 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| || Sbjct: 807 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaatta 866 Query: 309 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 367 ||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 867 actggactatccaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 926 Query: 368 gaggcaaactctgaatactagata 391 ||| ||||||||||||||| |||| Sbjct: 927 gagacaaactctgaatactggata 950 Score = 234 bits (118), Expect = 3e-58 Identities = 172/190 (90%) Strand = Plus / Plus Query: 424 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 483 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 484 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 543 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| |||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggt 1086 Query: 544 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 603 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1087 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcg 1146 Query: 604 cgctgaagat 613 ||| |||||| Sbjct: 1147 cgccgaagat 1156
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 398 bits (201), Expect = e-108 Identities = 341/387 (88%), Gaps = 8/387 (2%) Strand = Plus / Plus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| |||||| Sbjct: 966 atctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcctggtta 1025 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 |||| | |||| |||||||||||||||||||| | |||||| |||||||| Sbjct: 1026 agggtat-------accgaagccgtagcgaaagcgagtcattcaagggcgcatgtcactg 1078 Query: 129 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 188 ||||||||||||||| |||||||||||||||| ||||| |||||||||| |||| | || Sbjct: 1079 tttatggacccgaacccgggtgatctatccatggccagggtgaagcttgggtgaagccaa 1138 Query: 189 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 248 | |||| |||||||||||| ||||||| || ||||||||||| |||||||||||||||| Sbjct: 1139 gtggaggcccgaaccgactggtgttgaaaaaccagcggatgagctgtggttaggggtgaa 1198 Query: 249 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1199 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattg 1258 Query: 309 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 367 ||| || | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1259 actaaactgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 1318 Query: 368 gaggcaaactctgaatactagatatga 394 |||||||||||||||||||||| |||| Sbjct: 1319 gaggcaaactctgaatactagacatga 1345 Score = 270 bits (136), Expect = 5e-69 Identities = 172/184 (93%) Strand = Plus / Plus Query: 423 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 482 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 483 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 542 ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggagg 1477 Query: 543 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 602 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1478 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1537 Query: 603 gcgc 606 |||| Sbjct: 1538 gcgc 1541
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 396 bits (200), Expect = e-107 Identities = 341/386 (88%), Gaps = 9/386 (2%) Strand = Plus / Plus Query: 9 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 68 |||||||||||||||||||||||||||||||||||||||| ||| | |||||| |||||| Sbjct: 519 atctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcctggtta 578 Query: 69 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 128 || ||| || ||||||||||||||||| |||| || | || || |||||||| Sbjct: 579 agagaat-------actggagccgtagcgaaagcaagtcatatttgg-cgcatgtcactg 630 Query: 129 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 188 |||| |||||||||| |||||||||||||||| ||||| |||| ||||| |||| | || Sbjct: 631 tttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggtgaagccaa 690 Query: 189 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 248 | ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 691 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaa 750 Query: 249 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 308 ||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 751 atgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattg 810 Query: 309 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 367 | ||||| | ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 811 attggactacttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 870 Query: 368 gaggcaaactctgaatactagatatg 393 ||||||||||||||||||||| |||| Sbjct: 871 gaggcaaactctgaatactaggtatg 896 Score = 291 bits (147), Expect = 1e-75 Identities = 180/191 (94%) Strand = Plus / Plus Query: 423 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 482 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 483 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 542 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggagg 1031 Query: 543 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 602 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1032 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1091 Query: 603 gcgctgaagat 613 |||| |||||| Sbjct: 1092 gcgccgaagat 1102
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 377 bits (190), Expect = e-101 Identities = 336/381 (88%), Gaps = 9/381 (2%) Strand = Plus / Plus Query: 13 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 72 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 73 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 130 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 745 tatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagt 804 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 805 ggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaat 864 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga- 309 |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 865 gccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgat 924 Query: 310 -ctg-gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 367 || | ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 925 gttgagctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 984 Query: 368 gaggcaaactctgaatactag 388 | ||||||| ||||||||| Sbjct: 985 gtagcaaactaagaatactag 1005 Score = 190 bits (96), Expect = 4e-45 Identities = 150/168 (89%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1142 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1143 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1190
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 373 bits (188), Expect = e-100 Identities = 338/385 (87%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||| |||||| ||||||||||||| |||||||||||| | |||||| |||||||| Sbjct: 554 ctctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggcctggttaag 613 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 | |||| ||||||||||| |||||||||| |||||| |||||| | ||||| |||| Sbjct: 614 g----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggaaaatgtcattgct 668 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 | ||||||||||| ||||||||||| |||||||||||||| | |||| | |||||||| Sbjct: 669 tgtggacccgaacttgggtgatctaaccatgaccaggatgcaatttggttaaaactaagt 728 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 gggggtctgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 788 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||| ||||||||| ||||||||||||| ||||||||||| || ||||||||||||| || Sbjct: 789 gccaatcgaacccaaagctagctggttcgccccgaaatgcatttaggcgcagcagtt-ac 847 Query: 311 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 || ||||||||||||||||| ||||| |||||||| || |||||||||||||| ||| Sbjct: 848 cgggcatctaggggtaaagcattgttttggtgcgggtcacgagagcggtaccaaattgag 907 Query: 371 gcaaactctgaatactagatatgac 395 ||| ||| ||||||||||||||||| Sbjct: 908 gcagactatgaatactagatatgac 932 Score = 192 bits (97), Expect = 9e-46 Identities = 170/193 (88%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 398 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 457 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 458 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 517 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 518 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 577 | ||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 1064 t-agggtgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgcat 1122 Query: 578 aatagctcactga 590 ||||||| ||||| Sbjct: 1123 aatagctaactga 1135
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 359 bits (181), Expect = 7e-96 Identities = 181/181 (100%) Strand = Plus / Minus Query: 433 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 493 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 553 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 613 t 613 | Sbjct: 63709 t 63709
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 359 bits (181), Expect = 7e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 386 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 445 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 446 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 505 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 506 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 565 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 19153009 Query: 566 taaagagtgcgtaatagctca 586 |||||||||||| ||| |||| Sbjct: 19153010 taaagagtgcgttatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 359 bits (181), Expect = 7e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 386 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 445 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 446 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 505 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 506 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 565 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 76404 Query: 566 taaagagtgcgtaatagctca 586 |||||||||||| ||| |||| Sbjct: 76405 taaagagtgcgttatatctca 76425
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 349 bits (176), Expect = 7e-93 Identities = 176/176 (100%) Strand = Plus / Plus Query: 438 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 498 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 558 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 613 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 176
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 337 bits (170), Expect = 3e-89 Identities = 329/379 (86%), Gaps = 6/379 (1%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 73 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 74 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 133 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 134 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 193 ||||||||||| |||||||||| |||||||||||||||||||| | | |||| || || Sbjct: 830 ggacccgaacccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggagtgga 889 Query: 194 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 253 |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 890 agtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 949 Query: 254 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tg 312 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || || Sbjct: 950 aatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtg 1009 Query: 313 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 371 | | ||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 1010 ggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtag 1069 Query: 372 caaactctgaatactagat 390 |||||| ||||||||||| Sbjct: 1070 caaactaagaatactagat 1088 Score = 216 bits (109), Expect = 6e-53 Identities = 166/185 (89%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggag 1222 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 601 |||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| || Sbjct: 1223 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttct 1282 Query: 602 tgcgc 606 ||||| Sbjct: 1283 tgcgc 1287
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 337 bits (170), Expect = 3e-89 Identities = 278/311 (89%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 84 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 141 |||||||| ||||||||||||||| |||||||| || |||||| |||||||||||| Sbjct: 632 ccggagccaaagcgaaagcgagtctgaatagggcacttttgtcactttttatggacccga 691 Query: 142 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 201 ||| |||||||||| |||||||||||||||||||||| | |||| ||| |||||||||| Sbjct: 692 acccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaa 751 Query: 202 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 261 ||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 752 ccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaac 811 Query: 262 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-at 317 | ||||||||||||||||||||||||||||||||||||||| |||||| ||| | || Sbjct: 812 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctat 871 Query: 318 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 377 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 872 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaact 931 Query: 378 ctgaatactag 388 ||||||||| Sbjct: 932 aagaatactag 942 Score = 232 bits (117), Expect = 1e-57 Identities = 168/185 (90%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||||||||||||| ||||| |||||||||||||||| | ||| | ||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggag 1079 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 601 |||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 1080 gtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttct 1139 Query: 602 tgcgc 606 ||||| Sbjct: 1140 tgcgc 1144 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71 ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgacttatagaaagtggcttggttaagg 623
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 333 bits (168), Expect = 4e-88 Identities = 171/172 (99%) Strand = Plus / Plus Query: 1 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 516 Query: 61 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 517 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgat 576 Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 172 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 577 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 628
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 327 bits (165), Expect = 2e-86 Identities = 277/313 (88%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 83 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 142 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 143 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 202 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 203 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 262 |||||| ||||||| || || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 712 cgactggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaact 771 Query: 263 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctag 321 | ||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||| Sbjct: 772 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttag 831 Query: 322 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 381 |||||||||||||||||||||||||||| | | ||||||||||| || ||||||||||| Sbjct: 832 gggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctga 891 Query: 382 atactagatatga 394 |||||| |||||| Sbjct: 892 atactaaatatga 904 Score = 280 bits (141), Expect = 5e-72 Identities = 180/193 (93%) Strand = Plus / Plus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccagga 1034 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | Sbjct: 1035 ggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1094 Query: 601 ttgcgctgaagat 613 |||||| |||||| Sbjct: 1095 ttgcgccgaagat 1107 Score = 103 bits (52), Expect = 7e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 12 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 528 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagg 587
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 323 bits (163), Expect = 4e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Minus Query: 12 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 114870 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 114812 Query: 72 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 130 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 114811 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 114754 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 114753 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 114694 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 114693 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 114634 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 114633 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 114574 Query: 311 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 369 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 114573 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 114514 Query: 370 ggcaaactctgaatacta 387 |||||||||||||||||| Sbjct: 114513 ggcaaactctgaatacta 114496 Score = 323 bits (163), Expect = 4e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Plus Query: 12 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 2647 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 2705 Query: 72 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 130 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 2706 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 2763 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 2764 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 2823 Query: 191 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 250 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 2824 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 2883 Query: 251 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 310 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 2884 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 2943 Query: 311 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 369 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2944 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 3003 Query: 370 ggcaaactctgaatacta 387 |||||||||||||||||| Sbjct: 3004 ggcaaactctgaatacta 3021 Score = 163 bits (82), Expect = 8e-37 Identities = 154/178 (86%) Strand = Plus / Minus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 114423 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 114364 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 598 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| Sbjct: 114363 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgc 114306 Score = 163 bits (82), Expect = 8e-37 Identities = 154/178 (86%) Strand = Plus / Plus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 3094 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 3153 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 598 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| Sbjct: 3154 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgc 3211
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 319 bits (161), Expect = 6e-84 Identities = 209/225 (92%) Strand = Plus / Minus Query: 389 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 448 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 449 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 508 ||| || || ||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct: 580 atcatctcgaaagaaacagcccggatccccagctaaggcccttaaatgaccgctcaatga 521 Query: 509 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 568 |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 520 taaaggaggtgggggtgcaaagccagccatgaagtttgcctagaagcagccaccctttaa 461 Query: 569 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 613 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 416
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 317 bits (160), Expect = 2e-83 Identities = 322/371 (86%), Gaps = 5/371 (1%) Strand = Plus / Plus Query: 19 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 78 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| || | Sbjct: 2385 gcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaaggtaatg-- 2441 Query: 79 acccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggac 137 | || |||||| |||||||||||||| ||||||| ||| || |||||| |||| ||| Sbjct: 2442 atttactggagccatagcgaaagcgagttttaatagagcgtttagtcactatttatagac 2501 Query: 138 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 197 ||||||| |||||||||| ||||| ||||| |||||||| | | ||||||| |||| | Sbjct: 2502 ccgaacccgggtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcc 2561 Query: 198 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 257 |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| || Sbjct: 2562 cgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatc 2621 Query: 258 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggaca 316 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct: 2622 gaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataa 2681 Query: 317 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 376 | |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 2682 tttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaac 2741 Query: 377 tctgaatacta 387 ||||||||||| Sbjct: 2742 tctgaatacta 2752 Score = 153 bits (77), Expect = 8e-34 Identities = 143/165 (86%) Strand = Plus / Plus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | ||| |||| ||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtggaagtgcttagacaaccaggaggtttgcttagaa 2897 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 598 ||||| | |||||||||||||||||||||||||||| || ||||| Sbjct: 2898 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgc 2942
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 315 bits (159), Expect = 9e-83 Identities = 174/179 (97%) Strand = Plus / Plus Query: 76 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 135 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 136 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 195 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 196 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 254 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 315 bits (159), Expect = 9e-83 Identities = 329/382 (86%), Gaps = 9/382 (2%) Strand = Plus / Plus Query: 12 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71 |||||||||||||||||||||||||||||||||||||| || | |||||||||||||||| Sbjct: 538 tctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggcttggttaagg 597 Query: 72 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga--ttgtcactgc 129 | ||| | ||| |||| ||||||||| ||||| |||||||| | | |||||| Sbjct: 598 g---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaatcgtcacttt 653 Query: 130 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 189 ||| ||||||||||| |||||||||| ||||| |||||||||||||||| | |||| ||| Sbjct: 654 ttagggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaag 713 Query: 190 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 249 ||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 714 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaa 773 Query: 250 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt-- 307 ||||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 774 tgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgg 833 Query: 308 -gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 ||| || |||||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 834 cgacgggctgtctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaat 893 Query: 367 cgaggcaaactctgaatactag 388 || ||||||| ||||||||| Sbjct: 894 cgtagcaaactaagaatactag 915 Score = 200 bits (101), Expect = 4e-48 Identities = 164/185 (88%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||||||| |||| ||||| |||| ||||||||||| | |||| | ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggag 1052 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 601 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1053 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1112 Query: 602 tgcgc 606 ||||| Sbjct: 1113 tgcgc 1117
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 192 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 251 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 252 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 311 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 312 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 371 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 372 caaactctgaatactagatat 392 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 119 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 178 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 179 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 238 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 239 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 298 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 299 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 355 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 356 cggtaccaaatcgaggcaaactctgaatactaga 389 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 200 bits (101), Expect = 4e-48 Identities = 164/185 (88%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| || Sbjct: 1150 taaggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaag 1209 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 601 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1210 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttct 1269 Query: 602 tgcgc 606 ||||| Sbjct: 1270 tgcgc 1274 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71 ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| Sbjct: 693 tgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaagg 750
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 135 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 194 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 195 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 254 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 255 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 313 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 314 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 372 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 373 aaactctgaatactagatatgac 395 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 424 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 483 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 484 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 543 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 6706 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 6765 Query: 544 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 6766 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 6811 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 13 ctgaccgcgtgcctgttgaagaatgagccggcgact 48 |||||||| ||||||||||||||||||||||||||| Sbjct: 6234 ctgaccgcatgcctgttgaagaatgagccggcgact 6269 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 88 agccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||| ||||||||||| ||||||||||| Sbjct: 6304 agccgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 135 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 194 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 195 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 254 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 255 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 313 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 314 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 372 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 373 aaactctgaatactagatatgac 395 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 424 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 483 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 484 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 543 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 3769 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 3828 Query: 544 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 3829 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 3874 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 13 ctgaccgcgtgcctgttgaagaatgagccggcgact 48 |||||||| ||||||||||||||||||||||||||| Sbjct: 3297 ctgaccgcatgcctgttgaagaatgagccggcgact 3332 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 88 agccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||| ||||||||||| ||||||||||| Sbjct: 3367 agccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 135 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 194 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 195 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 254 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 255 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 313 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 314 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 372 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 373 aaactctgaatactagatatgac 395 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 424 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 483 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 484 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 543 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 1057 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 1116 Query: 544 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 1117 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 1162 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 13 ctgaccgcgtgcctgttgaagaatgagccggcgact 48 |||||||| ||||||||||||||||||||||||||| Sbjct: 585 ctgaccgcatgcctgttgaagaatgagccggcgact 620 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 88 agccgtagcgaaagcgagtcttaatagggcgat 120 ||||||||| ||||||||||| ||||||||||| Sbjct: 655 agccgtagcaaaagcgagtctgaatagggcgat 687
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 297 bits (150), Expect = 2e-77 Identities = 168/174 (96%) Strand = Plus / Plus Query: 440 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 500 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 559 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 560 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 613 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 430
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 295 bits (149), Expect = 9e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 73 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 192429 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 192488 Query: 74 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 133 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 192489 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 192543 Query: 134 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 193 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 192544 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 192603 Query: 194 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 253 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 192604 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 192663 Query: 254 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 311 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 192664 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 192723 Query: 312 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 192724 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 192783 Query: 371 gcaaactctgaatacta 387 ||||||| |||||||| Sbjct: 192784 gcaaactaagaatacta 192800 Score = 295 bits (149), Expect = 9e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Minus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 73 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 144353 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 144294 Query: 74 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 133 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 144293 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 144239 Query: 134 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 193 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 144238 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 144179 Query: 194 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 253 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 144178 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 144119 Query: 254 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 311 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 144118 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 144059 Query: 312 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 144058 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 143999 Query: 371 gcaaactctgaatacta 387 ||||||| |||||||| Sbjct: 143998 gcaaactaagaatacta 143982 Score = 159 bits (80), Expect = 1e-35 Identities = 137/156 (87%) Strand = Plus / Plus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 192890 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 192949 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactg 589 ||||||| |||| ||||||||||||||||||||||| Sbjct: 192950 gcagccatccttaaaagagtgcgtaatagctcactg 192985 Score = 159 bits (80), Expect = 1e-35 Identities = 137/156 (87%) Strand = Plus / Minus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 143892 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 143833 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactg 589 ||||||| |||| ||||||||||||||||||||||| Sbjct: 143832 gcagccatccttaaaagagtgcgtaatagctcactg 143797
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 293 bits (148), Expect = 3e-76 Identities = 178/188 (94%), Gaps = 5/188 (2%) Strand = Plus / Minus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 124 Query: 71 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 123 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 69 Query: 131 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 190 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 68 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 9 Query: 191 agaggtcc 198 ||||||| Sbjct: 8 ggaggtcc 1
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 289 bits (146), Expect = 5e-75 Identities = 263/302 (87%) Strand = Plus / Plus Query: 85 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 144 ||||||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| Sbjct: 2189 cggagccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacc 2248 Query: 145 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 204 || ||||||| |||| |||||||||||||| | | | ||| || ||||||||||||| Sbjct: 2249 cggatgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccg 2308 Query: 205 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 264 |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 2309 actgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccg 2368 Query: 265 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 324 ||||||||||||||||||||||||||||||||||||||| ||| | | | | |||| Sbjct: 2369 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttggggg 2428 Query: 325 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 384 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 2429 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaata 2488 Query: 385 ct 386 || Sbjct: 2489 ct 2490 Score = 206 bits (104), Expect = 6e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| ||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggag 2624 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 2625 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactg 2672 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 12 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 ||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2121 tctgacctcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2170
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 122 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 181 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 182 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 241 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 242 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 301 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 302 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 358 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 359 taccaaatcgaggcaaactctgaatactaga 389 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 240 bits (121), Expect = 4e-60 Identities = 169/185 (91%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggag 1085 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 601 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1086 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1145 Query: 602 tgcgc 606 ||||| Sbjct: 1146 tgcgc 1150 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 13 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 69 |||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 571 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaa 627
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 285 bits (144), Expect = 8e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 84 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 141 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 142 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 201 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 740 Query: 202 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 261 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 741 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 800 Query: 262 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 320 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 801 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 860 Query: 321 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 380 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 861 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 920 Query: 381 aatactagata 391 ||||||||||| Sbjct: 921 aatactagata 931 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 1063 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 1064 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 1123 Query: 601 ttgcgc 606 |||||| Sbjct: 1124 ttgcgc 1129 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 13 ctgaccgcgtgcctgttgaagaatgagccggcgact 48 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 285 bits (144), Expect = 8e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 84 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 141 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 142 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 201 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 25549 Query: 202 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 261 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 25550 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 25609 Query: 262 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 320 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 25610 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 25669 Query: 321 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 380 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 25670 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 25729 Query: 381 aatactagata 391 ||||||||||| Sbjct: 25730 aatactagata 25740 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 25872 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 600 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 25873 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 25932 Query: 601 ttgcgc 606 |||||| Sbjct: 25933 ttgcgc 25938 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 13 ctgaccgcgtgcctgttgaagaatgagccggcgact 48 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 283 bits (143), Expect = 3e-73 Identities = 264/303 (87%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 84 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 143 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 144 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 203 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 204 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 263 ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaaccc 428 Query: 264 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag-g 322 ||||||||||||||||||||||||| ||| ||||||||| || | |||||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaacgattaaatctaggg 488 Query: 323 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 382 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| Sbjct: 489 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaa 548 Query: 383 tac 385 ||| Sbjct: 549 tac 551 Score = 192 bits (97), Expect = 9e-46 Identities = 151/169 (89%) Strand = Plus / Plus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactg 734 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 21 gtgcctgttgaagaatgagccggcgactcatagg 54 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 88 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 147 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 148 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 207 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 208 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 267 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 268 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 324 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 325 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 384 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 934 Query: 385 ctaga 389 ||||| Sbjct: 935 ctaga 939 Score = 198 bits (100), Expect = 2e-47 Identities = 151/168 (89%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1076 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1077 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1124 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 69 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 618
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 3e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 94 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 152 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 153 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 212 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 213 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 272 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 273 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 329 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 330 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 386 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 174 bits (88), Expect = 2e-40 Identities = 148/168 (88%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 |||||||||||||| | || |||| |||||||||| | ||| ||||| |||| || Sbjct: 995 taaggcccctaaataatttctaagtgggaaaggaggtgagaatgctgagacaaccagaag 1054 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1055 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1102 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 54 ||||||||| ||||||||||||||| ||||||||| ||||| Sbjct: 543 tgaccgcgttcctgttgaagaatgaaccggcgacttatagg 583
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 88 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 147 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 148 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 207 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 208 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 267 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 268 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 324 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 325 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 384 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 2816 Query: 385 ctaga 389 ||||| Sbjct: 2817 ctaga 2821 Score = 198 bits (100), Expect = 2e-47 Identities = 151/168 (89%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 2958 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2959 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 3006 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 11 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 69 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2442 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 2500
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 97 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 156 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 157 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 216 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 217 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 276 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 277 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 335 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 336 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 97 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 156 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 157 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 216 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 217 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 276 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 277 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 335 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 336 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 190 bits (96), Expect = 4e-45 Identities = 150/168 (89%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 189991 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 189992 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactg 190039 Score = 190 bits (96), Expect = 4e-45 Identities = 150/168 (89%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 151418 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 151419 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactg 151466 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 20 cgtgcctgttgaagaatgagccggcgactcatag 53 ||||| ||||||||||||||||||||||| |||| Sbjct: 189494 cgtgcatgttgaagaatgagccggcgacttatag 189527 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 20 cgtgcctgttgaagaatgagccggcgactcatag 53 ||||| ||||||||||||||||||||||| |||| Sbjct: 150921 cgtgcatgttgaagaatgagccggcgacttatag 150954
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 280 bits (141), Expect = 5e-72 Identities = 321/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 73 ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 598 tgaccgcatgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggca 657 Query: 74 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 133 | || || |||||| ||||||||| ||||| ||||||||| |||||||| |||| Sbjct: 658 aa--aagcc---ggagccaaagcgaaagcaagtctgaatagggcgcttgtcactttttat 712 Query: 134 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 193 ||||||||||||| |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 713 ggacccgaacctgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 772 Query: 194 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 253 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 773 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 832 Query: 254 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 311 | |||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 833 agtcgaactcagagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 892 Query: 312 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 370 || | | ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 893 gggctagttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 952 Query: 371 gcaaactctgaatacta 387 ||||||| |||||||| Sbjct: 953 gcaaactaagaatacta 969 Score = 174 bits (88), Expect = 2e-40 Identities = 139/156 (89%) Strand = Plus / Plus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 ||| ||||| |||| |||||||||| |||||||||| |||| |||||||| ||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtgaaaatgcaaagacaaccagaaggtttgcttagaa 1118 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactg 589 |||||||||||| ||||||||||||||||||||||| Sbjct: 1119 gcagccacccttaaaagagtgcgtaatagctcactg 1154
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 278 bits (140), Expect = 2e-71 Identities = 164/172 (95%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 442 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 501 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 502 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 561 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 562 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 613 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 168118
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 278 bits (140), Expect = 2e-71 Identities = 164/172 (95%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 442 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 501 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 502 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 561 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 562 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 613 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 2522
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 278 bits (140), Expect = 2e-71 Identities = 315/369 (85%), Gaps = 7/369 (1%) Strand = Plus / Plus Query: 21 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 80 |||| ||||||||||||||||||||||| ||| | |||||| |||||||| || | | Sbjct: 188572 gtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggtaaagaat- 188629 Query: 81 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 140 |||| |||| || ||||||||| | ||||| ||| | |||||| |||| |||||| Sbjct: 188630 --accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttatagacccg 188687 Query: 141 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 200 |||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||||||||| Sbjct: 188688 aacccggatgatctagccatggccagggtgaagcttaggtaacactaagtggaggtccga 188747 Query: 201 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 260 ||||||| |||||||| ||| |||||||||||||||| |||||||||||||||| ||||| Sbjct: 188748 accgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgccaatcgaa 188807 Query: 261 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggacatc 318 || ||||||||||||||||||||||||| ||||||||||||| ||||| || | | Sbjct: 188808 tccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct-taaact 188866 Query: 319 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 378 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 188867 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 188926 Query: 379 tgaatacta 387 ||||||||| Sbjct: 188927 tgaatacta 188935 Score = 276 bits (139), Expect = 8e-71 Identities = 320/376 (85%), Gaps = 7/376 (1%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 73 ||||| ||||| ||||||||||||||||||||||| ||| | |||||| |||||||| | Sbjct: 150122 tgacctcgtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggta 150180 Query: 74 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 133 | | | |||| |||| || ||||||||| | ||||| ||| | |||||| |||| Sbjct: 150181 aagaat---accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttat 150237 Query: 134 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 193 |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| || Sbjct: 150238 agacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaagtgga 150297 Query: 194 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 253 ||||||| |||||| |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 150298 ggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgcc 150357 Query: 254 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 311 | ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| || Sbjct: 150358 aatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct 150417 Query: 312 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 371 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 150418 -taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagg 150476 Query: 372 caaactctgaatacta 387 |||||||||||||||| Sbjct: 150477 caaactctgaatacta 150492 Score = 163 bits (82), Expect = 8e-37 Identities = 145/166 (87%) Strand = Plus / Plus Query: 424 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 483 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 484 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 543 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 189011 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 189070 Query: 544 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||| |||||||||| | |||||||||||||||||||||||||||| Sbjct: 189071 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactg 189116 Score = 163 bits (82), Expect = 8e-37 Identities = 145/166 (87%) Strand = Plus / Plus Query: 424 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 483 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 484 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 543 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 150568 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 150627 Query: 544 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||| |||||||||| | |||||||||||||||||||||||||||| Sbjct: 150628 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactg 150673
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Minus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 5974 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 5915 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 5914 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 5855 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 5854 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 5795 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 5794 agctagctggttctccccgaaatacgttgaggcg 5761 Score = 151 bits (76), Expect = 3e-33 Identities = 142/164 (86%) Strand = Plus / Minus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 5586 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | | || |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 5585 atcaacactaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 5526 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 597 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 5525 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 5482 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 6041 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 5994 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 211798 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 211857 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 211858 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 211917 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 211918 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 211977 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 211978 agctagctggttctccccgaaatacgttgaggcg 212011 Score = 151 bits (76), Expect = 3e-33 Identities = 142/164 (86%) Strand = Plus / Plus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 212186 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | | || |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 212187 atcaacactaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 212246 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 597 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 212247 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 212290 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 211731 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 211778 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 130 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 189 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 190 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 249 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 250 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 309 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 310 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 367 cgaggcaaactctgaatact 386 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 206 bits (104), Expect = 6e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 1084 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 13 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 570 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 618
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 130 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 189 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 190 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 249 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 250 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 309 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 310 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 366 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 367 cgaggcaaactctgaatact 386 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 206 bits (104), Expect = 6e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 2822 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 13 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 2308 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 2356
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 270 bits (136), Expect = 5e-69 Identities = 251/286 (87%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 73 |||||| |||||||||||||||||||||||||||| ||||| | |||| ||||||||| Sbjct: 2776 tgaccgtgtgcctgttgaagaatgagccggcgacttataggtactggca-ggttaaggg- 2833 Query: 74 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 133 |||| | |||||||| ||||||||||||||| ||||||||||| |||| | |||| Sbjct: 2834 --ggaaatc-ccggagccacagcgaaagcgagtctgaatagggcgatggtcagtatttat 2890 Query: 134 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 193 |||||||||| |||||||||| ||||| |||||||||||||||| ||| || | | || Sbjct: 2891 agacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgataccacgtgga 2950 Query: 194 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 253 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2951 ggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcc 3010 Query: 254 actcgaacccagagctagctggttctccccgaaatgcgttgaggcg 299 | |||||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 3011 aatcgaacccggagctagctggttctccccgaaatacgtttaggcg 3056 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 3232 ataagcgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 3291 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 597 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 3292 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 3335 Score = 91.7 bits (46), Expect = 3e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 321 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 379 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 380 gaatac 385 |||||| Sbjct: 3139 gaatac 3144
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 84 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 138 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 139 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 198 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 199 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 258 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 259 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 315 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 316 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 374 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 375 actctgaatactagata 391 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 13 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 456 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 515 ||||||||||||||| ||||||||||||||||||||||||| | || |||| |||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaagga 1185 Query: 516 ggtgggggtgcaaagacagccaggaggtttgcctagaa 553 ||| | |||| | ||| ||||||||||||| ||||| Sbjct: 1186 tgtgatgttgcagaaacaaccaggaggtttgcttagaa 1223 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 549 tagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||||||||| | |||| ||||||||||||||||||||||| Sbjct: 1848 tagaagcagcaagccttaaaagagtgcgtaatagctcactg 1888
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 84 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 138 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 139 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 198 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 199 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 258 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 259 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 315 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 316 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 374 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 375 actctgaatactagata 391 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 13 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 456 agagggaaacagcccggatcaccagctaaggcccctaaatg 496 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 8e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 97 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 156 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 157 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 216 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 217 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 276 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 277 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 333 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 334 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 198 bits (100), Expect = 2e-47 Identities = 151/168 (89%) Strand = Plus / Plus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactagga 685 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 588 ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcact 733 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 12 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 56 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 266 bits (134), Expect = 8e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 84 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 143 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 137118 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 137177 Query: 144 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 203 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 137178 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 137237 Query: 204 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 263 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 137238 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 137297 Query: 264 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 320 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 137298 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 137357 Query: 321 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 380 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 137358 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 137417 Query: 381 aatactag 388 |||||||| Sbjct: 137418 aatactag 137425 Score = 266 bits (134), Expect = 8e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Minus Query: 84 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 143 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 48426 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 48367 Query: 144 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 203 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 48366 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 48307 Query: 204 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 263 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 48306 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 48247 Query: 264 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 320 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 48246 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 48187 Query: 321 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 380 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 48186 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 48127 Query: 381 aatactag 388 |||||||| Sbjct: 48126 aatactag 48119 Score = 192 bits (97), Expect = 9e-46 Identities = 163/185 (88%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 137502 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 137561 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 601 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 137562 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 137621 Query: 602 tgcgc 606 ||||| Sbjct: 137622 tgcgc 137626 Score = 192 bits (97), Expect = 9e-46 Identities = 163/185 (88%) Strand = Plus / Minus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 48042 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 47983 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 601 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 47982 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 47923 Query: 602 tgcgc 606 ||||| Sbjct: 47922 tgcgc 47918 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 137110 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 48434
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 266 bits (134), Expect = 8e-68 Identities = 267/310 (86%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 83 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 142 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 143 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 202 || |||||||||| ||||| |||||| ||||||||| |||||| | || |||||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaac 743 Query: 203 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 262 |||| || |||||||| || |||||||||||||||||||||||||||| ||| |||||| Sbjct: 744 cgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaact 803 Query: 263 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca- 316 | ||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 804 cggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcag 863 Query: 317 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 376 ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 864 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaac 923 Query: 377 tctgaatact 386 | ||||||| Sbjct: 924 taagaatact 933 Score = 232 bits (117), Expect = 1e-57 Identities = 171/189 (90%) Strand = Plus / Plus Query: 418 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 477 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 478 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 537 ||||||||||||| |||| |||||||||||||||||| ||| | |||| ||||| ||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaacca 1067 Query: 538 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 597 |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1068 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcg 1127 Query: 598 cccttgcgc 606 | ||||||| Sbjct: 1128 ctcttgcgc 1136 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 13 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 559 ctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttggttaagg 617
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 266 bits (134), Expect = 8e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||||||||||||| |||||| || |||| |||||||||| Sbjct: 356101 ggagccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccc 356160 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 ||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 356161 tggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 356220 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 356221 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccagg 356280 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 356281 agctagctggttctccccgaaatacgttgaggcg 356314 Score = 119 bits (60), Expect = 1e-23 Identities = 138/164 (84%) Strand = Plus / Plus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| || |||| ||||||||||||| || | |||||||||| ||| || Sbjct: 356430 tgggggataagctccacactcgaaagggaaacagcccagaccgccagctaaggtcccaaa 356489 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | || |||||||||||||||||| ||| ||||| ||||||||||||| ||||| Sbjct: 356490 atcagtactaagtgataaaggaggtgggattgcttagacaaccaggaggtttgcttagaa 356549 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 597 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 356550 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 356593 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 356034 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 356081 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcga 369 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 264 bits (133), Expect = 3e-67 Identities = 157/165 (95%) Strand = Plus / Minus Query: 449 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 508 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 509 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 568 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 569 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 613 |||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 115310
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 262 bits (132), Expect = 1e-66 Identities = 323/379 (85%), Gaps = 7/379 (1%) Strand = Plus / Plus Query: 12 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71 ||||||| ||||| ||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 2321 tctgacctcgtgcatgttgaagaatgagccggcgacttgtatgcagtggca-ggttaagg 2379 Query: 72 -gaacggaacccaccggagccgtagcgaaagcgagtcttaatagg-gcgattgtcactgc 129 | | ||| ||||||||| ||| ||||||||| ||| ||| | ||| | ||||||| Sbjct: 2380 cgtaaagaat--accggagccatagtgaaagcgag-cttgataagagcgttcgtcactgt 2436 Query: 130 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 189 ||| |||||||||| || ||||||| |||| ||||| |||||||| | | | |||||| Sbjct: 2437 ttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggtaacactaag 2496 Query: 190 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 249 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 2497 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaaa 2556 Query: 250 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 309 ||||| ||||| || ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 2557 tgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcggttga 2616 Query: 310 ctggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 368 | | | ||||||||||||||||||||||| ||||||| | ||||||||||||||| Sbjct: 2617 tgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggtaccaaatcg 2676 Query: 369 aggcaaactctgaatacta 387 ||||||||||||||||||| Sbjct: 2677 aggcaaactctgaatacta 2695 Score = 159 bits (80), Expect = 1e-35 Identities = 146/168 (86%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 |||||||||||||| || |||| |||||| ||||| |||| ||||| ||||||| Sbjct: 2769 taaggcccctaaatatttactaagtggcaaaggaagtgggaatgcatagacaaccaggag 2828 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 2829 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactg 2876
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2138158 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 2138099 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2138098 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2138039 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2138038 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 2137979 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 2137978 agctagctggttctccccgaaatacgttgaggcg 2137945 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 476702 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 476761 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 476762 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 476821 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 476822 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 476881 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 476882 agctagctggttctccccgaaatacgttgaggcg 476915 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%) Strand = Plus / Minus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | | || |||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 2137769 atcaacactaagtgataaaggaggtgggattgcatagacaaccaggaggtttgcctagaa 2137710 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 597 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 2137709 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 2137666 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | | || |||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 477091 atcaacactaagtgataaaggaggtgggattgcatagacaaccaggaggtttgcctagaa 477150 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 597 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 477151 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 477194 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2138225 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2138178 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 476635 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 476682 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 2e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 97 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 156 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 157 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 216 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 217 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 276 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 277 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 333 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 334 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 198 bits (100), Expect = 2e-47 Identities = 151/168 (89%) Strand = Plus / Plus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactagga 685 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 588 ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcact 733 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 56 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 258 bits (130), Expect = 2e-65 Identities = 253/292 (86%), Gaps = 4/292 (1%) Strand = Plus / Plus Query: 12 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71 |||||| |||||||||||||||||||||||||||||| ||| | |||||| |||||||| Sbjct: 2303 tctgactgcgtgcctgttgaagaatgagccggcgacttataagtagtggca-ggttaagg 2361 Query: 72 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 131 | | | ||||||||| ||| ||||||||| || ||||||||| ||||||||| || Sbjct: 2362 tagagaat---accggagccatagtgaaagcgagcctgaatagggcgtttgtcactggtt 2418 Query: 132 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 191 || |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| Sbjct: 2419 atagacccgaacccggatgatctaaccatggccaggttgaagcttaggtaatactaagtg 2478 Query: 192 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 251 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2479 gaggaccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 2538 Query: 252 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 303 ||| ||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2539 ccaatcgaattcggagctagctggttctccccgaaatgcgtttaggcgcagc 2590 Score = 192 bits (97), Expect = 9e-46 Identities = 154/173 (89%) Strand = Plus / Plus Query: 423 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 482 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 483 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 542 ||||||||||||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 2751 aaggcccctaaataattgctaagtgataaaggaggtgggagtgcatagacaatcaggagg 2810 Query: 543 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 ||||| |||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 2811 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactgatcgag 2863
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 339409 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 339350 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 339349 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 339290 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 339289 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 339230 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 339229 agctagctggttctccccgaaatacgttgaggcg 339196 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 132469 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 132410 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 132409 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 132350 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 132349 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 132290 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 132289 agctagctggttctccccgaaatacgttgaggcg 132256 Score = 147 bits (74), Expect = 5e-32 Identities = 140/162 (86%) Strand = Plus / Minus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 339021 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | | || |||||||||||||||||| | || ||||| ||||||||||||||||||| Sbjct: 339020 atcaacactaagtgataaaggaggtgggattccatagacaaccaggaggtttgcctagaa 338961 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 ||||||| ||| || |||||||||||||||||||| ||||| Sbjct: 338960 gcagccatcctcaaaggagtgcgtaatagctcactggtcgag 338919 Score = 147 bits (74), Expect = 5e-32 Identities = 140/162 (86%) Strand = Plus / Minus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 132081 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | | || |||||||||||||||||| | || ||||| ||||||||||||||||||| Sbjct: 132080 atcaacactaagtgataaaggaggtgggattccatagacaaccaggaggtttgcctagaa 132021 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgag 595 ||||||| ||| || |||||||||||||||||||| ||||| Sbjct: 132020 gcagccatcctcaaaggagtgcgtaatagctcactggtcgag 131979 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 339476 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 339429 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 132536 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 132489 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 258 bits (130), Expect = 2e-65 Identities = 271/312 (86%), Gaps = 7/312 (2%) Strand = Plus / Plus Query: 88 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 145 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 | ||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | | Sbjct: 776 ccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcgg 835 Query: 266 agctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctagg 322 |||||||||| ||||||||||||||||||||||||||| || || || || |||| || Sbjct: 836 agctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttgg 894 Query: 323 ggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 381 |||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| || Sbjct: 895 ggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcaga 954 Query: 382 atactagatatg 393 |||| ||||||| Sbjct: 955 atacaagatatg 966 Score = 167 bits (84), Expect = 5e-38 Identities = 147/168 (87%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||||||||||||| | || |||| |||||| ||| | ||| | ||| ||||||| Sbjct: 1038 taaggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggag 1097 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1098 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactg 1145 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 72 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Minus Query: 24 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 83 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 39855 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 39800 Query: 84 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 142 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 39799 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 39740 Query: 143 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 202 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 39739 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 39680 Query: 203 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 262 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 39679 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 39620 Query: 263 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 321 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 39619 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 39560 Query: 322 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 381 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 39559 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 39500 Query: 382 atacta 387 |||||| Sbjct: 39499 atacta 39494 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 24 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 83 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 19545 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 19600 Query: 84 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 142 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 19601 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 19660 Query: 143 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 202 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 19661 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 19720 Query: 203 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 262 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 19721 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 19780 Query: 263 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 321 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 19781 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 19840 Query: 322 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 381 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 19841 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 19900 Query: 382 atacta 387 |||||| Sbjct: 19901 atacta 19906 Score = 153 bits (77), Expect = 8e-34 Identities = 143/165 (86%) Strand = Plus / Minus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | ||| |||||||||||| ||||| ||| ||||| ||||||||| |||||||| Sbjct: 39408 ataattgctaagtgataaaggatgtgggaatgctgagacaatcaggaggttcgcctagaa 39349 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 598 ||||| | ||||||||||||||||||||||||||||||| ||||| Sbjct: 39348 gcagctatcctttaaagagtgcgtaatagctcactgatcaagcgc 39304 Score = 153 bits (77), Expect = 8e-34 Identities = 143/165 (86%) Strand = Plus / Plus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | ||| |||||||||||| ||||| ||| ||||| ||||||||| |||||||| Sbjct: 19992 ataattgctaagtgataaaggatgtgggaatgctgagacaatcaggaggttcgcctagaa 20051 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 598 ||||| | ||||||||||||||||||||||||||||||| ||||| Sbjct: 20052 gcagctatcctttaaagagtgcgtaatagctcactgatcaagcgc 20096
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 252 bits (127), Expect = 1e-63 Identities = 272/317 (85%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 84 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 138 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 139 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 198 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 935 Query: 199 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 258 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 936 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 995 Query: 259 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 315 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 996 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1054 Query: 316 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 374 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1055 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1114 Query: 375 actctgaatactagata 391 |||| |||||||||||| Sbjct: 1115 actcagaatactagata 1131 Score = 131 bits (66), Expect = 3e-27 Identities = 117/134 (87%) Strand = Plus / Plus Query: 456 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 515 ||||||||||||||| ||||||||||||||||||||||||| | || |||| |||||| Sbjct: 1180 agagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaagga 1239 Query: 516 ggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgc 575 ||| | ||| | ||| ||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 1240 tgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccacccttgaaagagtgc 1299 Query: 576 gtaatagctcactg 589 |||||||||||||| Sbjct: 1300 gtaatagctcactg 1313 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 750 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaaggttaagg 807
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 5e-63 Identities = 310/368 (84%), Gaps = 5/368 (1%) Strand = Plus / Plus Query: 19 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 78 |||||||||||||||||||||||||||||| ||||||| |||| ||||||||| | | Sbjct: 188 gcgtgcctgttgaagaatgagccggcgacttataggcactggca-ggttaaggggaataa 246 Query: 79 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 138 |||| | |||| || |||| ||||||| ||||||||| | |||| || |||| |||| Sbjct: 247 accc---gaagccaaagggaaaccgagtctgaatagggcgttagtcagtgtttatagacc 303 Query: 139 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 198 |||||| |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||| Sbjct: 304 cgaacccgggtgatctaaccatgtccaggatgaagcttgggtgacaccaagtggaggtcc 363 Query: 199 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 258 |||||||| |||||| | ||||||||| |||||||||||||||||||||| ||| Sbjct: 364 gaaccgaccaccgttgaaaaggtggcggatgaggtgtggttaggggtgaaatgccaatcg 423 Query: 259 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 318 ||||| ||||||||||||||||| ||||||| |||||||| |||| |||| ||| | Sbjct: 424 aacccggagctagctggttctcctcgaaatgtgttgaggcacagcggttgtgattacagc 483 Query: 319 t-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 377 | |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| Sbjct: 484 tggggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaact 543 Query: 378 ctgaatac 385 | |||||| Sbjct: 544 cagaatac 551 Score = 200 bits (101), Expect = 4e-48 Identities = 152/169 (89%) Strand = Plus / Plus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||| ||||||||| ||| |||| ||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccctaaatggatgctaagtggtaaaggaggtgggattgcagagacaaccagga 685 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 |||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactg 734
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 5e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 94 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 153 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 154 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 213 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 214 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 273 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 274 ggttctccccgaaatgcgttgaggcgcagc 303 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 216 bits (109), Expect = 6e-53 Identities = 160/177 (90%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| ||||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggag 687 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 598 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| Sbjct: 688 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgc 744 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 321 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 380 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 381 aatac 385 ||||| Sbjct: 548 aatac 552 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 12 tctgaccgcgtgcctgttgaagaatgagccggcga 46 |||||||||||||||||||||| |||||||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagcatgagccggcga 216
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 5e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 94 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 153 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 154 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 213 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 214 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 273 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 274 ggttctccccgaaatgcgttgaggcgcagc 303 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 218 bits (110), Expect = 2e-53 Identities = 161/178 (90%) Strand = Plus / Plus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||| ||| ||||||| ||| |||||||||||||||| | ||||| |||| |||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccagga 686 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 598 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 687 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgc 744 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 321 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 380 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 381 aatac 385 ||||| Sbjct: 548 aatac 552 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| ||||||||||||| |||||||||||| | |||||||||||| Sbjct: 184 tgaccgtgtgcctgttgaagcatgagccggcgagttataggcagtggc 231
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 250 bits (126), Expect = 5e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 84 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 142 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 143 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 202 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 203 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 262 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 263 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 320 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 321 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 379 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 380 gaatactagatatg 393 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 159 bits (80), Expect = 1e-35 Identities = 146/168 (86%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||||||||||||| | || |||| ||||||| ||| | ||| | ||| |||||| Sbjct: 1033 taaggcccctaaatggtcactaagtggtaaaggatgtgagaatgctgaaacaaccaggaa 1092 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 ||| || |||||||||| ||| || ||||||||||||||||||||||| Sbjct: 1093 gttcgcttagaagcagctacctttcaaagagtgcgtaatagctcactg 1140 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 62 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 5e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 54 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 5e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 54 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 5e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 54 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 5e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 192 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 251 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 252 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 311 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 312 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 368 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 369 aggcaaactctgaatactag 388 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 170 bits (86), Expect = 3e-39 Identities = 156/178 (87%), Gaps = 1/178 (0%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 480 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 ||||||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| | Sbjct: 1013 ctaaggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaa 1072 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 598 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgc 1130 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 15 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 121 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 176 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 250 bits (126), Expect = 5e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 84 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 142 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 143 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 202 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 203 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 262 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 263 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 320 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 321 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 379 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 380 gaatactagatatg 393 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 159 bits (80), Expect = 1e-35 Identities = 146/168 (86%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||||||||||||| | || |||| ||||||| ||| | ||| | ||| |||||| Sbjct: 1033 taaggcccctaaatggtcactaagtggtaaaggatgtgagaatgctgaaacaaccaggaa 1092 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 589 ||| || |||||||||| ||| || ||||||||||||||||||||||| Sbjct: 1093 gttcgcttagaagcagctacctttcaaagagtgcgtaatagctcactg 1140 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 62 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 248 bits (125), Expect = 2e-62 Identities = 197/221 (89%) Strand = Plus / Plus Query: 83 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 142 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 143 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 202 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 203 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 262 |||| ||||||||| |||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 742 cgaccgatgttgaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaact 801 Query: 263 cagagctagctggttctccccgaaatgcgttgaggcgcagc 303 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 802 cggagctagctggttctccccgaaatgcgttgaggcgcagc 842 Score = 234 bits (118), Expect = 3e-58 Identities = 163/178 (91%) Strand = Plus / Plus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccagga 1063 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 598 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 1064 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgc 1121 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 12 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 316 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 375 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 376 ctctgaatactagata 391 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 246 bits (124), Expect = 7e-62 Identities = 273/317 (86%), Gaps = 8/317 (2%) Strand = Plus / Plus Query: 84 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 140 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 141 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 200 |||| ||||||||||| ||||||||||||||||||||| | | || ||| ||||||||| Sbjct: 704 aacccgggtgatctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccga 763 Query: 201 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 260 |||||| ||||||||| |||| |||||||||||||| |||||| ||||| ||| ||||| Sbjct: 764 accgaccgatgttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaa 823 Query: 261 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-at 317 | | ||||||||||| ||||||||||||||||||||||||||| || || || || || Sbjct: 824 ctcggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactat 882 Query: 318 ctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 376 || |||||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||| Sbjct: 883 cttggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaac 942 Query: 377 tctgaatactagatatg 393 || |||||| ||||||| Sbjct: 943 tcagaatacaagatatg 959 Score = 151 bits (76), Expect = 3e-33 Identities = 130/148 (87%) Strand = Plus / Plus Query: 442 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 501 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| | | Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatggtcac 2766 Query: 502 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 561 | |||| ||||||| ||| | ||| | ||| ||||||||||||| ||||||||||||| Sbjct: 2767 taagtggtaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccac 2826 Query: 562 cctttaaagagtgcgtaatagctcactg 589 |||| ||||||||||||||||||||||| Sbjct: 2827 ccttcaaagagtgcgtaatagctcactg 2854 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 246 bits (124), Expect = 7e-62 Identities = 269/314 (85%), Gaps = 5/314 (1%) Strand = Plus / Plus Query: 84 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 141 |||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 718 ccggagccttagcgaaagcaagtcttaatagggcgataaagtcacttcttatggacccga 777 Query: 142 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 201 ||| ||||||||||| |||| |||||||||||||||| | | || || |||||||||| Sbjct: 778 acccgggtgatctattcatggccaggatgaagcttgggtaacacctagtggaggtccgaa 837 Query: 202 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 261 ||||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 838 ccgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaac 897 Query: 262 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg--actggacatct 319 | ||||||||||| ||||||||||||||||||||||||||| || | | | |||| Sbjct: 898 tcggagctagctggatctccccgaaatgcgttgaggcgcagcggtggctatgagctatct 957 Query: 320 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 378 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 958 agaggtaaagcgactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1017 Query: 379 tgaatactagatat 392 ||||||||||||| Sbjct: 1018 agaatactagatat 1031 Score = 125 bits (63), Expect = 2e-25 Identities = 118/135 (87%), Gaps = 1/135 (0%) Strand = Plus / Plus Query: 456 agagggaaacagcccggatcaccagctaaggcccctaaatgac-cgctcagtgataaagg 514 ||||||||||||||| |||||||||||||||||||||||||| | || |||| |||| Sbjct: 1079 agagggaaacagcccagatcaccagctaaggcccctaaatgagtcactaagtggagaagg 1138 Query: 515 aggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtg 574 | ||| | ||| || ||| ||||||||||||| ||||||||||||||||| |||||||| Sbjct: 1139 atgtgacgatgctaaaacaaccaggaggtttgcttagaagcagccacccttgaaagagtg 1198 Query: 575 cgtaatagctcactg 589 ||||||||||||||| Sbjct: 1199 cgtaatagctcactg 1213 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 13 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 71 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 651 ctgaccgcgtgcctgttgaagaatgagcctgcgacttatagggagtggcaaggttaagg 709
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 94 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 153 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 154 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 213 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 214 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 273 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 274 ggttctccccgaaatgcgttgaggcgcagcagttg 308 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 218 bits (110), Expect = 2e-53 Identities = 161/178 (90%) Strand = Plus / Plus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccagga 688 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 598 |||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| Sbjct: 689 ggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgc 746 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 321 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 380 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 381 aatac 385 ||||| Sbjct: 550 aatac 554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 12 tctgaccgcgtgcctgttgaagaatgagccggcga 46 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 244 bits (123), Expect = 3e-61 Identities = 262/305 (85%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 84 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 143 |||||||| || |||| ||||||| || ||||||| ||| || |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaac 308 Query: 144 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 203 | ||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 cctggtgatctaaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 204 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 263 ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacca 428 Query: 264 agagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag 321 ||||||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctgg 486 Query: 322 -gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 380 |||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 381 aatac 385 ||||| Sbjct: 547 aatac 551 Score = 198 bits (100), Expect = 2e-47 Identities = 151/168 (89%) Strand = Plus / Plus Query: 421 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 480 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 481 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 540 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactagga 685 Query: 541 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 588 ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcact 733 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 56 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 244 bits (123), Expect = 3e-61 Identities = 267/310 (86%), Gaps = 5/310 (1%) Strand = Plus / Plus Query: 84 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 143 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 144 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 203 | |||||||||| |||| |||||||||| |||| | | || || | |||||||||||| Sbjct: 878 ccgggtgatctaatcatggccaggatgaaatttgggtaacaccaaccggaggtccgaacc 937 Query: 204 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 263 ||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | Sbjct: 938 gaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactc 997 Query: 264 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt--gactggacatctag 321 ||||||||||| ||||||||||||||||||||||||||| ||| || | ||||||| Sbjct: 998 ggagctagctggatctccccgaaatgcgttgaggcgcagcggttaagatttaccatctag 1057 Query: 322 gggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 380 ||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||| | Sbjct: 1058 gggtaaagcgactgtttcggtgcgggctgcgaaagcggtaccaagtcgtggcaaactcag 1117 Query: 381 aatactagat 390 |||||||||| Sbjct: 1118 aatactagat 1127 Score = 123 bits (62), Expect = 7e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 456 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 515 ||||||||||||||| ||||||||||||||||||||||||| | || |||| |||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaagga 1236 Query: 516 ggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgc 575 ||| | ||| | ||| ||||||||||||| ||||||||||||||||| | ||||||| Sbjct: 1237 tgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccacccttgatagagtgc 1296 Query: 576 gtaatagctcactg 589 |||||||||||||| Sbjct: 1297 gtaatagctcactg 1310 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 13 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 94 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 153 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 154 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 213 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 214 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 273 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 274 ggttctccccgaaatgcgttgaggcg 299 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 159 bits (80), Expect = 1e-35 Identities = 143/164 (87%) Strand = Plus / Plus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 320614 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 320673 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 597 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 320674 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 320717 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 320158 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 320205 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcga 369 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Minus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 1775855 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 1775796 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 1775795 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 1775736 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 1775735 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 1775676 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 1775675 agctagctggttctccccgaaatacgttgaggcg 1775642 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 376214 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 376273 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 376274 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 376333 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 376334 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 376393 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 376394 agctagctggttctccccgaaatacgttgaggcg 376427 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%) Strand = Plus / Minus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 1775526 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 1775467 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | | || |||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1775466 atcaacactaagtgataaaggaggtgggattgcatagacaaccaggaggtttgcctagaa 1775407 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 597 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 1775406 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 1775363 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 376543 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 376602 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | | || |||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 376603 atcaacactaagtgataaaggaggtgggattgcatagacaaccaggaggtttgcctagaa 376662 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 597 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 376663 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 376706 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1775922 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 1775875 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 376147 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 376194 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 94 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 153 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 154 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 213 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 214 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 273 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 274 ggttctccccgaaatgcgttgaggcg 299 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 159 bits (80), Expect = 1e-35 Identities = 143/164 (87%) Strand = Plus / Plus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2977 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3036 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 3037 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 3096 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 597 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 3097 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 3140 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2581 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2628 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcga 369 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 94 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 153 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 154 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 213 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 214 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 273 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 274 ggttctccccgaaatgcgttgaggcg 299 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 159 bits (80), Expect = 1e-35 Identities = 143/164 (87%) Strand = Plus / Plus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2978 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3037 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 3038 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 3097 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 597 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 3098 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 3141 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2582 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2629 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcga 369 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 86 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 145 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2876 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 2935 Query: 146 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 205 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2936 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2995 Query: 206 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 265 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2996 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 3055 Query: 266 agctagctggttctccccgaaatgcgttgaggcg 299 ||||||||||||||||||||||| |||||||||| Sbjct: 3056 agctagctggttctccccgaaatacgttgaggcg 3089 Score = 159 bits (80), Expect = 1e-35 Identities = 143/164 (87%) Strand = Plus / Plus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 3205 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 3264 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | | || |||||||| ||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 3265 atcaacactaagtgataagggaggtgggattgcatagacaaccaggaggtttgcctagaa 3324 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 597 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 3325 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 3368 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2809 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2856 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 3127 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 3177
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 1e-60 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 94 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 153 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 154 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 213 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 214 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 273 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 274 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 330 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 331 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 385 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 208 bits (105), Expect = 2e-50 Identities = 159/177 (89%) Strand = Plus / Plus Query: 422 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 481 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 482 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 541 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 685 Query: 542 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 598 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 686 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgc 742 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 12 tctgaccgcgtgcctgttgaagaatgagccggcgact 48 |||||||| |||||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcgact 218
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 94 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 153 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 154 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 213 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 214 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 273 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 274 ggttctccccgaaatgcgttgaggcg 299 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 159 bits (80), Expect = 1e-35 Identities = 143/164 (87%) Strand = Plus / Minus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 19844 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 19843 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 19784 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 597 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 19783 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 19740 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 20299 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 20252 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcga 369 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 94 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 153 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 154 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 213 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 214 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 273 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 274 ggttctccccgaaatgcgttgaggcg 299 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 159 bits (80), Expect = 1e-35 Identities = 143/164 (87%) Strand = Plus / Minus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 1598 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 1597 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 1538 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 597 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 1537 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 1494 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2053 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2006 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcga 369 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 94 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 153 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 154 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 213 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 214 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 273 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 274 ggttctccccgaaatgcgttgaggcg 299 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 159 bits (80), Expect = 1e-35 Identities = 143/164 (87%) Strand = Plus / Plus Query: 434 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 493 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 316043 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 316102 Query: 494 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 553 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 316103 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 316162 Query: 554 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 597 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 316163 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 316206 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 14 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 61 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 315647 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 315694 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 335 tttcggtgcgggctgcgcgagcggtaccaaatcga 369 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,749,467 Number of Sequences: 3902068 Number of extensions: 3749467 Number of successful extensions: 72892 Number of sequences better than 10.0: 2947 Number of HSP's better than 10.0 without gapping: 2978 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 54477 Number of HSP's gapped (non-prelim): 17513 length of query: 613 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 590 effective length of database: 17,143,297,704 effective search space: 10114545645360 effective search space used: 10114545645360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
